EMLSAG00000000595, EMLSAG00000000595-683361 (gene) Lepeophtheirus salmonis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of EMLSAG00000000595 vs. C. finmarchicus
Match: gi|592768089|gb|GAXK01186479.1| (TSA: Calanus finmarchicus comp44980_c11_seq15 transcribed RNA sequence) HSP 1 Score: 28.1054 bits (61), Expect = 2.845e+0 Identity = 12/27 (44.44%), Postives = 14/27 (51.85%), Query Frame = 0 Query: 2 CSDWNMLRGPPLPPTKHTHGTQRHHQS 28 CSD N G LP T+ HG HH + Sbjct: 3323 CSDANCPTGEALPLTQSCHGECNHHPT 3403
BLAST of EMLSAG00000000595 vs. C. finmarchicus
Match: gi|592768090|gb|GAXK01186478.1| (TSA: Calanus finmarchicus comp44980_c11_seq14 transcribed RNA sequence) HSP 1 Score: 28.1054 bits (61), Expect = 2.845e+0 Identity = 12/27 (44.44%), Postives = 14/27 (51.85%), Query Frame = 0 Query: 2 CSDWNMLRGPPLPPTKHTHGTQRHHQS 28 CSD N G LP T+ HG HH + Sbjct: 3400 CSDANCPTGEALPLTQSCHGECNHHPT 3480
BLAST of EMLSAG00000000595 vs. C. finmarchicus
Match: gi|592768091|gb|GAXK01186477.1| (TSA: Calanus finmarchicus comp44980_c11_seq13 transcribed RNA sequence) HSP 1 Score: 28.1054 bits (61), Expect = 2.846e+0 Identity = 12/27 (44.44%), Postives = 14/27 (51.85%), Query Frame = 0 Query: 2 CSDWNMLRGPPLPPTKHTHGTQRHHQS 28 CSD N G LP T+ HG HH + Sbjct: 3373 CSDANCPTGEALPLTQSCHGECNHHPT 3453
BLAST of EMLSAG00000000595 vs. C. finmarchicus
Match: gi|592768092|gb|GAXK01186476.1| (TSA: Calanus finmarchicus comp44980_c11_seq12 transcribed RNA sequence) HSP 1 Score: 28.1054 bits (61), Expect = 2.846e+0 Identity = 12/27 (44.44%), Postives = 14/27 (51.85%), Query Frame = 0 Query: 2 CSDWNMLRGPPLPPTKHTHGTQRHHQS 28 CSD N G LP T+ HG HH + Sbjct: 3412 CSDANCPTGEALPLTQSCHGECNHHPT 3492
BLAST of EMLSAG00000000595 vs. C. finmarchicus
Match: gi|592768093|gb|GAXK01186475.1| (TSA: Calanus finmarchicus comp44980_c11_seq11 transcribed RNA sequence) HSP 1 Score: 28.1054 bits (61), Expect = 2.846e+0 Identity = 12/27 (44.44%), Postives = 14/27 (51.85%), Query Frame = 0 Query: 2 CSDWNMLRGPPLPPTKHTHGTQRHHQS 28 CSD N G LP T+ HG HH + Sbjct: 3385 CSDANCPTGEALPLTQSCHGECNHHPT 3465
BLAST of EMLSAG00000000595 vs. L. salmonis peptides
Match: EMLSAP00000000595 (pep:novel supercontig:LSalAtl2s:LSalAtl2s109:350574:353421:1 gene:EMLSAG00000000595 transcript:EMLSAT00000000595 description:"snap_masked-LSalAtl2s109-processed-gene-3.11") HSP 1 Score: 163.31 bits (412), Expect = 1.179e-53 Identity = 77/77 (100.00%), Postives = 77/77 (100.00%), Query Frame = 0 Query: 1 MCSDWNMLRGPPLPPTKHTHGTQRHHQSFNMRQSLFKNKYFIKKGHSQIFTIQVLRVFNPLYGSATITEPFIHALIM 77 MCSDWNMLRGPPLPPTKHTHGTQRHHQSFNMRQSLFKNKYFIKKGHSQIFTIQVLRVFNPLYGSATITEPFIHALIM Sbjct: 1 MCSDWNMLRGPPLPPTKHTHGTQRHHQSFNMRQSLFKNKYFIKKGHSQIFTIQVLRVFNPLYGSATITEPFIHALIM 77 The following BLAST results are available for this feature:
BLAST of EMLSAG00000000595 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO) Total hits: 0
BLAST of EMLSAG00000000595 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA) Total hits: 25
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BLAST of EMLSAG00000000595 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self) Total hits: 1
BLAST of EMLSAG00000000595 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt) Total hits: 0
BLAST of EMLSAG00000000595 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods) Total hits: 0
BLAST of EMLSAG00000000595 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017)) Total hits: 0
BLAST of EMLSAG00000000595 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins) Total hits: 0
Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Cross References
External references for this gene
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at LSalAtl2s109:350574..353421+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>EMLSAG00000000595-683361 ID=EMLSAG00000000595-683361|Name=EMLSAG00000000595|organism=Lepeophtheirus salmonis|type=gene|length=2848bp|location=Sequence derived from alignment at LSalAtl2s109:350574..353421+ (Lepeophtheirus salmonis)back to top Add to Basket
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