EMLSAG00000000604, EMLSAG00000000604-683370 (gene) Lepeophtheirus salmonis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of EMLSAG00000000604 vs. C. finmarchicus
Match: gi|592916718|gb|GAXK01041657.1| (TSA: Calanus finmarchicus comp325627_c0_seq4 transcribed RNA sequence) HSP 1 Score: 55.8398 bits (133), Expect = 7.815e-9 Identity = 40/145 (27.59%), Postives = 60/145 (41.38%), Query Frame = 0 Query: 25 RWLYMYQLPYVPEFELTLMGNTQYNEDDRSSK-------------DIEAYDFTFSRQSN-----------------------------------------RVDFELICRSSEFVDKFTVQIVENSGQKPHQTHSKRVNAYIKQFL 115 RWLY+ +LP++PE E+ + N D R K D EAY +TFSR S+ V EL+ +S+E+V++F +QIV +G PHQ + VN +I +F+ Sbjct: 353 RWLYVCRLPFLPEMEM--VSNDLEVFDKRFKKSSSVTDLTNYSNFDKEAYKYTFSRTSDWQGPINYFRNLPLADSSVLREEGPKQSIPVEALLLVGNMDPEVSLELVSQSAEYVERFAMQIVNGAGHNPHQEQANVVNKHITKFI 781
BLAST of EMLSAG00000000604 vs. C. finmarchicus
Match: gi|592916719|gb|GAXK01041656.1| (TSA: Calanus finmarchicus comp325627_c0_seq3 transcribed RNA sequence) HSP 1 Score: 55.8398 bits (133), Expect = 1.035e-8 Identity = 40/145 (27.59%), Postives = 60/145 (41.38%), Query Frame = 0 Query: 25 RWLYMYQLPYVPEFELTLMGNTQYNEDDRSSK-------------DIEAYDFTFSRQSN-----------------------------------------RVDFELICRSSEFVDKFTVQIVENSGQKPHQTHSKRVNAYIKQFL 115 RWLY+ +LP++PE E+ + N D R K D EAY +TFSR S+ V EL+ +S+E+V++F +QIV +G PHQ + VN +I +F+ Sbjct: 675 RWLYVCRLPFLPEMEM--VSNDLEVFDKRFKKSSSVTDLTNYSNFDKEAYKYTFSRTSDWQGPINYFRNLPLADSSVLREEGPKQSIPVEALLLVGNMDPEVSLELVSQSAEYVERFAMQIVNGAGHNPHQEQANVVNKHITKFI 1103
BLAST of EMLSAG00000000604 vs. C. finmarchicus
Match: gi|592916720|gb|GAXK01041655.1| (TSA: Calanus finmarchicus comp325627_c0_seq2 transcribed RNA sequence) HSP 1 Score: 55.8398 bits (133), Expect = 1.158e-8 Identity = 40/145 (27.59%), Postives = 60/145 (41.38%), Query Frame = 0 Query: 25 RWLYMYQLPYVPEFELTLMGNTQYNEDDRSSK-------------DIEAYDFTFSRQSN-----------------------------------------RVDFELICRSSEFVDKFTVQIVENSGQKPHQTHSKRVNAYIKQFL 115 RWLY+ +LP++PE E+ + N D R K D EAY +TFSR S+ V EL+ +S+E+V++F +QIV +G PHQ + VN +I +F+ Sbjct: 675 RWLYVCRLPFLPEMEM--VSNDLEVFDKRFKKSSSVTDLTNYSNFDKEAYKYTFSRTSDWQGPINYFRNLPLADSSVLREEGPKQSIPVEALLLVGNMDPEVSLELVSQSAEYVERFAMQIVNGAGHNPHQEQANVVNKHITKFI 1103
BLAST of EMLSAG00000000604 vs. C. finmarchicus
Match: gi|592916721|gb|GAXK01041654.1| (TSA: Calanus finmarchicus comp325627_c0_seq1 transcribed RNA sequence) HSP 1 Score: 51.9878 bits (123), Expect = 2.277e-7 Identity = 35/144 (24.31%), Postives = 58/144 (40.28%), Query Frame = 0 Query: 25 RWLYMYQLPYVPEFELTLMGNTQYNEDDRSSK-----------DIEAYDFTFSRQSN-----------------------------------------RVDFELICRSSEFVDKFTVQIVENSGQKPHQTHSKRVNAYIKQFLD 116 RWLY+ +LP++PE E+ +++ + S D EAY +TFSR ++ V +L+ +S+E+VD+F QI+ +G PHQ VN I +F++ Sbjct: 675 RWLYVCRLPFLPEMEMVSNDLEVFDKRFKKSSSVTDLTNYSNFDKEAYKYTFSRTADWQGPINYLRNLHLADSTIFKREEPNHCIPVETLFLVGNNDPEVSLDLVSQSAEYVDRFASQIINGAGHNPHQEQPDFVNKLIAKFVE 1106
BLAST of EMLSAG00000000604 vs. C. finmarchicus
Match: gi|592916717|gb|GAXK01041658.1| (TSA: Calanus finmarchicus comp325627_c0_seq5 transcribed RNA sequence) HSP 1 Score: 51.6026 bits (122), Expect = 2.456e-7 Identity = 38/146 (26.03%), Postives = 58/146 (39.73%), Query Frame = 0 Query: 25 RWLYMYQLPYVPEFELTLMGNTQYNEDDRSSK-------------DIEAYDFTFSRQSN-----------------------------------------RVDFELICRSSEFVDKFTVQIVENSGQKPHQTHSKRVNAYIKQFLD 116 RWLY+ +LP++PE E+ + N D R K D EAY +TFSR ++ V +L+ +S+E+VD+F QI+ +G PHQ VN I +F++ Sbjct: 353 RWLYVCRLPFLPEMEM--VSNDLEVFDKRFKKSSSVTDLTNYSNFDKEAYKYTFSRTADWQGPINYLRNLHLADSTIFKREEPNHCIPVETLFLVGNNDPEVSLDLVSQSAEYVDRFASQIINGAGHNPHQEQPDFVNKLIAKFVE 784
BLAST of EMLSAG00000000604 vs. C. finmarchicus
Match: gi|592923151|gb|GAXK01035238.1| (TSA: Calanus finmarchicus comp1516806_c0_seq5 transcribed RNA sequence) HSP 1 Score: 44.2838 bits (103), Expect = 1.787e-5 Identity = 23/56 (41.07%), Postives = 33/56 (58.93%), Query Frame = 0 Query: 80 SSEFVDKFTVQIVENSGQKPHQTHSKRVNAYIKQFLD----ISNDNLSNDYNIESS 131 S+E+VD+F V+IV+N G PH N+YI QF+ I+ + DYN+E S Sbjct: 2 SAEYVDRFKVKIVKNVGHSPHVEDPSLTNSYITQFIKDSEMITENTYMRDYNVEQS 169
BLAST of EMLSAG00000000604 vs. C. finmarchicus
Match: gi|592916715|gb|GAXK01041660.1| (TSA: Calanus finmarchicus comp325627_c0_seq7 transcribed RNA sequence) HSP 1 Score: 43.1282 bits (100), Expect = 9.365e-5 Identity = 18/54 (33.33%), Postives = 29/54 (53.70%), Query Frame = 0 Query: 63 FTFSRQSNRVDFELICRSSEFVDKFTVQIVENSGQKPHQTHSKRVNAYIKQFLD 116 F V +L+ +S+E+VD+F QI+ +G PHQ VN I +F++ Sbjct: 250 FLVGNNDPEVSLDLVSQSAEYVDRFASQIINGAGHNPHQEQPDFVNKLIAKFVE 411
BLAST of EMLSAG00000000604 vs. C. finmarchicus
Match: gi|592923154|gb|GAXK01035235.1| (TSA: Calanus finmarchicus comp1516806_c0_seq2 transcribed RNA sequence) HSP 1 Score: 43.8986 bits (102), Expect = 9.872e-5 Identity = 23/56 (41.07%), Postives = 33/56 (58.93%), Query Frame = 0 Query: 80 SSEFVDKFTVQIVENSGQKPHQTHSKRVNAYIKQFLD----ISNDNLSNDYNIESS 131 S+E+VD+F V+IV+N G PH N+YI QF+ I+ + DYN+E S Sbjct: 2 SAEYVDRFKVKIVKNVGHSPHVEDPSLTNSYITQFIKDSEMITENTYMRDYNVEQS 169
BLAST of EMLSAG00000000604 vs. C. finmarchicus
Match: gi|592923155|gb|GAXK01035234.1| (TSA: Calanus finmarchicus comp1516806_c0_seq1 transcribed RNA sequence) HSP 1 Score: 43.8986 bits (102), Expect = 9.974e-5 Identity = 23/56 (41.07%), Postives = 33/56 (58.93%), Query Frame = 0 Query: 80 SSEFVDKFTVQIVENSGQKPHQTHSKRVNAYIKQFLD----ISNDNLSNDYNIESS 131 S+E+VD+F V+IV+N G PH N+YI QF+ I+ + DYN+E S Sbjct: 2 SAEYVDRFKVKIVKNVGHSPHVEDPSLTNSYITQFIKDSEMITENTYMRDYNVEQS 169
BLAST of EMLSAG00000000604 vs. C. finmarchicus
Match: gi|592913714|gb|GAXK01044661.1| (TSA: Calanus finmarchicus comp4027163_c0_seq1 transcribed RNA sequence) HSP 1 Score: 36.965 bits (84), Expect = 1.069e-2 Identity = 16/39 (41.03%), Postives = 26/39 (66.67%), Query Frame = 0 Query: 77 ICRSSEFVDKFTVQIVENSGQKPHQTHSKRVNAYIKQFL 115 + +S E+VD+FT++IVE++G+ HQ VN I F+ Sbjct: 297 VSQSGEYVDRFTMEIVEDAGKNLHQEQPYIVNKIIANFI 413
BLAST of EMLSAG00000000604 vs. L. salmonis peptides
Match: EMLSAP00000000604 (pep:novel supercontig:LSalAtl2s:LSalAtl2s109:441513:445120:-1 gene:EMLSAG00000000604 transcript:EMLSAT00000000604 description:"maker-LSalAtl2s109-snap-gene-4.44") HSP 1 Score: 375.555 bits (963), Expect = 5.365e-134 Identity = 180/180 (100.00%), Postives = 180/180 (100.00%), Query Frame = 0 Query: 1 MAHIQKRYVQTLVVLGATLKNIGFRWLYMYQLPYVPEFELTLMGNTQYNEDDRSSKDIEAYDFTFSRQSNRVDFELICRSSEFVDKFTVQIVENSGQKPHQTHSKRVNAYIKQFLDISNDNLSNDYNIESSKELELNYGAPRLLNSIFNKILDLTFQKDEPKPTNELSHYNAPPSIPCKF 180 MAHIQKRYVQTLVVLGATLKNIGFRWLYMYQLPYVPEFELTLMGNTQYNEDDRSSKDIEAYDFTFSRQSNRVDFELICRSSEFVDKFTVQIVENSGQKPHQTHSKRVNAYIKQFLDISNDNLSNDYNIESSKELELNYGAPRLLNSIFNKILDLTFQKDEPKPTNELSHYNAPPSIPCKF Sbjct: 1 MAHIQKRYVQTLVVLGATLKNIGFRWLYMYQLPYVPEFELTLMGNTQYNEDDRSSKDIEAYDFTFSRQSNRVDFELICRSSEFVDKFTVQIVENSGQKPHQTHSKRVNAYIKQFLDISNDNLSNDYNIESSKELELNYGAPRLLNSIFNKILDLTFQKDEPKPTNELSHYNAPPSIPCKF 180
BLAST of EMLSAG00000000604 vs. nr
Match: gi|225719144|gb|ACO15418.1| (Abhydrolase domain-containing protein 7 [Caligus clemensi]) HSP 1 Score: 110.538 bits (275), Expect = 1.505e-25 Identity = 71/200 (35.50%), Postives = 102/200 (51.00%), Query Frame = 0 Query: 24 FRWLYMYQLPYVPEFELTLMGNTQYNEDDRSSKDIEAYDFTFSRQSN------------------------------------------RVDFELICRSSEFVDKFTVQIVENSGQKPHQTHSKRVNAYIKQFLDISNDNLSNDYNIESSKELELNYGAPR-LLNSIFNKILDLTFQKDEPKPTNELSHYNAPPSIPCKF 180 F+WLYMY+ P++PE EL ++ N + RS D E Y +TFSRQ++ +VDFE ICRSS+FVDKF VQ+VEN+ + PHQTH +VN IK+FLDI + I E E+ + AP+ +NSI +++L L E + E+S Y++ +PCK+ Sbjct: 219 FKWLYMYRFPFLPEIEL-MLDNKAISPKARSQLDKEVYKYTFSRQTDWTGGLNYYRNFPLYLCHLRSKVEDQILPLPIQVLFITGDCQSKVDFEQICRSSKFVDKFAVQVVENADRNPHQTHPDQVNDLIKEFLDIRK----VESEIHFGSEFEIPFDAPKSQINSIVSRLLGLA---QEKSTSMEISPYSS--MMPCKY 408
BLAST of EMLSAG00000000604 vs. nr
Match: gi|1101347184|ref|XP_018899417.1| (PREDICTED: epoxide hydrolase 4-like isoform X3 [Bemisia tabaci]) HSP 1 Score: 62.003 bits (149), Expect = 3.945e-8 Identity = 32/102 (31.37%), Postives = 57/102 (55.88%), Query Frame = 0 Query: 25 RWLYMYQLPYVPEFE-----LTLMGNTQYNEDDRSSKD---IEAYDFTFSRQSNR---VDFELICRSSEFVDKFTVQIVENSGQKPHQTHSKRVNAYIKQFL 115 RW+Y Q+P +PE E + ++ + K ++AY +TFS N+ ++ E I +S+E+ +K+ ++++ENSG PHQ H + VN + +FL Sbjct: 207 RWIYFSQIPLLPELEALQEDVRIIDKCHQHLISGGGKIDSFMDAYKYTFSTVGNKDNCIELESIIKSTEYTEKYFLKVIENSGHFPHQEHPETVNQALAKFL 308 The following BLAST results are available for this feature:
BLAST of EMLSAG00000000604 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO) Total hits: 0
BLAST of EMLSAG00000000604 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA) Total hits: 10
BLAST of EMLSAG00000000604 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self) Total hits: 1
BLAST of EMLSAG00000000604 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt) Total hits: 0
BLAST of EMLSAG00000000604 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods) Total hits: 0
BLAST of EMLSAG00000000604 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017)) Total hits: 2
BLAST of EMLSAG00000000604 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins) Total hits: 0
Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Cross References
External references for this gene
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at LSalAtl2s109:441513..445120- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>EMLSAG00000000604-683370 ID=EMLSAG00000000604-683370|Name=EMLSAG00000000604|organism=Lepeophtheirus salmonis|type=gene|length=3608bp|location=Sequence derived from alignment at LSalAtl2s109:441513..445120- (Lepeophtheirus salmonis)back to top Add to Basket
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