EMLSAG00000000613, EMLSAG00000000613-683379 (gene) Lepeophtheirus salmonis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of EMLSAG00000000613 vs. C. finmarchicus
Match: gi|592773328|gb|GAXK01181240.1| (TSA: Calanus finmarchicus comp552002_c1_seq2 transcribed RNA sequence) HSP 1 Score: 51.2174 bits (121), Expect = 3.244e-5 Identity = 44/125 (35.20%), Postives = 62/125 (49.60%), Query Frame = 0 Query: 319 LGSKLRNLNSGIHRVDLED--------ILESELKLSNNKRLEDPIPPPHAS------------------KRQAPRLHPKLTHKRPQTSIVHRPSMNLKKQIKPIQDKVNPRAVAYRSLPLIDRYQ 417 L SK+ ++SGIHR+DL++ + E + K S++ IP S KRQ +HPKLT++RP +HRPSMN+K IK + NP + +SLP I RYQ Sbjct: 1405 LSSKISKMSSGIHRLDLDEMLDLDMLEVPEEDQKSSDSYPRTTAIPSSRYSNDLGNENYDSKLKEKNYPKRQV-TIHPKLTYQRPVFDDIHRPSMNIKDMIKNKESSYNPPHSSIKSLPPIARYQ 1776
BLAST of EMLSAG00000000613 vs. C. finmarchicus
Match: gi|592773329|gb|GAXK01181239.1| (TSA: Calanus finmarchicus comp552002_c1_seq1 transcribed RNA sequence) HSP 1 Score: 51.2174 bits (121), Expect = 3.246e-5 Identity = 44/125 (35.20%), Postives = 62/125 (49.60%), Query Frame = 0 Query: 319 LGSKLRNLNSGIHRVDLED--------ILESELKLSNNKRLEDPIPPPHAS------------------KRQAPRLHPKLTHKRPQTSIVHRPSMNLKKQIKPIQDKVNPRAVAYRSLPLIDRYQ 417 L SK+ ++SGIHR+DL++ + E + K S++ IP S KRQ +HPKLT++RP +HRPSMN+K IK + NP + +SLP I RYQ Sbjct: 1419 LSSKISKMSSGIHRLDLDEMLDLDMLEVPEEDQKSSDSYPRTTAIPSSRYSNDLGNENYDSKLKEKNYPKRQV-TIHPKLTYQRPVFDDIHRPSMNIKDMIKNKESSYNPPHSSIKSLPPIARYQ 1790
BLAST of EMLSAG00000000613 vs. C. finmarchicus
Match: gi|592762217|gb|GAXK01192196.1| (TSA: Calanus finmarchicus comp40327_c1_seq2 transcribed RNA sequence) HSP 1 Score: 33.4982 bits (75), Expect = 6.366e+0 Identity = 22/71 (30.99%), Postives = 34/71 (47.89%), Query Frame = 0 Query: 1199 RGPKRNLHAHNIESHISDPTESKIPLHLDPVVSRLKPPLVKELKVPRLISTLERPSLNKYGSSNETQKSFP 1269 + P +LH +H P + PLH P ++ L P L+ +VPRL P + Y +S E+ + FP Sbjct: 1829 QSPGCSLHTPPHNTHTDSPLHNAAPLHSAPHLAWLHPLLLAAAQVPRL------PLYSTY*TSGESSEVFP 2023
BLAST of EMLSAG00000000613 vs. C. finmarchicus
Match: gi|592762218|gb|GAXK01192195.1| (TSA: Calanus finmarchicus comp40327_c1_seq1 transcribed RNA sequence) HSP 1 Score: 33.4982 bits (75), Expect = 6.429e+0 Identity = 22/71 (30.99%), Postives = 34/71 (47.89%), Query Frame = 0 Query: 1199 RGPKRNLHAHNIESHISDPTESKIPLHLDPVVSRLKPPLVKELKVPRLISTLERPSLNKYGSSNETQKSFP 1269 + P +LH +H P + PLH P ++ L P L+ +VPRL P + Y +S E+ + FP Sbjct: 2087 QSPGCSLHTPPHNTHTDSPLHNAAPLHSAPHLAWLHPLLLAAAQVPRL------PLYSTY*TSGESSEVFP 2281
BLAST of EMLSAG00000000613 vs. C. finmarchicus
Match: gi|592861907|gb|GAXK01095655.1| (TSA: Calanus finmarchicus comp201490_c1_seq8 transcribed RNA sequence) HSP 1 Score: 33.113 bits (74), Expect = 9.627e+0 Identity = 31/91 (34.07%), Postives = 40/91 (43.96%), Query Frame = 0 Query: 987 YLPPHIEYIHPASSRIDKTPSIK-----YLPPPPRTESH--------PHAKFILPTKEDMVKFRSYTVPSKEHGYLPPPKSMKRLVYPTQD 1064 YLPPH EY P + PS K YLPPPP + PH+ ++ P+ D K Y P YLPPP ++ P +D Sbjct: 1265 YLPPHAEYKPPHGDYLPPKPSYKPPHKEYLPPPPDHDHQGLPTSYKPPHSDYLPPS--DHKKGYDYKPPGPS-DYLPPPPEHEQYKPPHKD 1528
BLAST of EMLSAG00000000613 vs. C. finmarchicus
Match: gi|592861908|gb|GAXK01095654.1| (TSA: Calanus finmarchicus comp201490_c1_seq7 transcribed RNA sequence) HSP 1 Score: 33.113 bits (74), Expect = 9.631e+0 Identity = 31/91 (34.07%), Postives = 40/91 (43.96%), Query Frame = 0 Query: 987 YLPPHIEYIHPASSRIDKTPSIK-----YLPPPPRTESH--------PHAKFILPTKEDMVKFRSYTVPSKEHGYLPPPKSMKRLVYPTQD 1064 YLPPH EY P + PS K YLPPPP + PH+ ++ P+ D K Y P YLPPP ++ P +D Sbjct: 1265 YLPPHAEYKPPHGDYLPPKPSYKPPHKEYLPPPPDHDHQGLPTSYKPPHSDYLPPS--DHKKGYDYKPPGPS-DYLPPPPEHEQYKPPHKD 1528
BLAST of EMLSAG00000000613 vs. C. finmarchicus
Match: gi|592861909|gb|GAXK01095653.1| (TSA: Calanus finmarchicus comp201490_c1_seq6 transcribed RNA sequence) HSP 1 Score: 33.113 bits (74), Expect = 9.635e+0 Identity = 31/91 (34.07%), Postives = 40/91 (43.96%), Query Frame = 0 Query: 987 YLPPHIEYIHPASSRIDKTPSIK-----YLPPPPRTESH--------PHAKFILPTKEDMVKFRSYTVPSKEHGYLPPPKSMKRLVYPTQD 1064 YLPPH EY P + PS K YLPPPP + PH+ ++ P+ D K Y P YLPPP ++ P +D Sbjct: 1265 YLPPHAEYKPPHGDYLPPKPSYKPPHKEYLPPPPDHDHQGLPTSYKPPHSDYLPPS--DHKKGYDYKPPGPS-DYLPPPPEHEQYKPPHKD 1528
BLAST of EMLSAG00000000613 vs. C. finmarchicus
Match: gi|592861910|gb|GAXK01095652.1| (TSA: Calanus finmarchicus comp201490_c1_seq5 transcribed RNA sequence) HSP 1 Score: 33.113 bits (74), Expect = 9.639e+0 Identity = 31/91 (34.07%), Postives = 40/91 (43.96%), Query Frame = 0 Query: 987 YLPPHIEYIHPASSRIDKTPSIK-----YLPPPPRTESH--------PHAKFILPTKEDMVKFRSYTVPSKEHGYLPPPKSMKRLVYPTQD 1064 YLPPH EY P + PS K YLPPPP + PH+ ++ P+ D K Y P YLPPP ++ P +D Sbjct: 1265 YLPPHAEYKPPHGDYLPPKPSYKPPHKEYLPPPPDHDHQGLPTSYKPPHSDYLPPS--DHKKGYDYKPPGPS-DYLPPPPEHEQYKPPHKD 1528
BLAST of EMLSAG00000000613 vs. L. salmonis peptides
Match: EMLSAP00000000613 (pep:novel supercontig:LSalAtl2s:LSalAtl2s109:556028:560502:1 gene:EMLSAG00000000613 transcript:EMLSAT00000000613 description:"maker-LSalAtl2s109-augustus-gene-5.10") HSP 1 Score: 2726.43 bits (7066), Expect = 0.000e+0 Identity = 1349/1349 (100.00%), Postives = 1349/1349 (100.00%), Query Frame = 0 Query: 1 MTKRKRCIQNSPFRGWIIPGLVLSTLLGSCTQTSNGQEFTPYTNPLIDFSAIETNINSSTIEINNDNKISPELEKVFPKYAKKFASFEEDNLSQGNDAEMESLVKSSDFAVIDSQTESFGSVDDIEDHLPSHLLEEDDLMSEGTTVMLFNIFTPEEVSFLSSLVGEDVVEELKENNVLLETQEESKNVRPSSQEIDQGVSNIRESLKPYQKFLKDGFESTEEEGSSTNYPKDNIFEQRENTMKNMLNRLSDKYKKRLDDNSFHKESISSSDSNSEEKEKIKKMKVMIENLRAKLENSGKNDLNESSSYSAQRRTFENILGSKLRNLNSGIHRVDLEDILESELKLSNNKRLEDPIPPPHASKRQAPRLHPKLTHKRPQTSIVHRPSMNLKKQIKPIQDKVNPRAVAYRSLPLIDRYQTSPWPRTMSKSNVRSLPLYQHTPGPKVHTVGFDENPITKELPLQKPAPLISSDPFPDTKELPPYHFPSARPYVRQEAVHAPPVPPYVPPMRINPPSFPSQMHHTPPHTTKIPTTLYYPITPSNFDPTKKPKTSYDKKKATMPKYVSSNSYRSNQEKKSKKLFXSHVDHPTSGTQYPMPSYNYKEPSLKFKDFGELAIAVTPKNVPHTGTTVKSYGVSSPEKSEIISLPDPRDNYFPKSLQFLSGVHSTTPNPPSPKYTTMKPPTISFTPSSFSIESTTSEYKLPQYDSHSPQVLRNVLSTTMKTPTKEYLHPVSAVTKSYQEYRSSTQHPENYGHKTTRIPQGIESPITQGYKYLKKINNIYDKYVEHSSPKDERDKQMDGSTQTELITAYQNLFSLLGFSTDFKSTFQHFMPLSNDRFKKQKQQRERQLFQDPPKRVPKGRIPAGNRGSEYPPDTEYRPSLHPPSHKKFHYKDNPEYESSPHDEYLNDDYHNVRLPIDGYKSPISNGPGKGSVIIKGDHEHPPDTQYIPPFHVDRSFSHEFFNSKMDRNLLLIDDEEMEQNEIDMMQSYLPPHIEYIHPASSRIDKTPSIKYLPPPPRTESHPHAKFILPTKEDMVKFRSYTVPSKEHGYLPPPKSMKRLVYPTQDTAALNKSNPSNIFHLKDQKYYKVPSKSGQQVNDSSLNIKVNSNNDKEQHKVTIVSSGNEKTNELKHSPHSINIEINIPSNDEINLLNGNEKFHVKRKIGDMFPTSRAIVYRPHLLPIKQKDEDYKGEYPPVTYDRGPKRNLHAHNIESHISDPTESKIPLHLDPVVSRLKPPLVKELKVPRLISTLERPSLNKYGSSNETQKSFPNYLPPHERNEKVPPNLLHDNPSKDPMEKFSLPQKDNSSGGIKLPGNKYLLAKYTKLNTAPDKNYLPPKYEKGLSVPDGEY 1349 MTKRKRCIQNSPFRGWIIPGLVLSTLLGSCTQTSNGQEFTPYTNPLIDFSAIETNINSSTIEINNDNKISPELEKVFPKYAKKFASFEEDNLSQGNDAEMESLVKSSDFAVIDSQTESFGSVDDIEDHLPSHLLEEDDLMSEGTTVMLFNIFTPEEVSFLSSLVGEDVVEELKENNVLLETQEESKNVRPSSQEIDQGVSNIRESLKPYQKFLKDGFESTEEEGSSTNYPKDNIFEQRENTMKNMLNRLSDKYKKRLDDNSFHKESISSSDSNSEEKEKIKKMKVMIENLRAKLENSGKNDLNESSSYSAQRRTFENILGSKLRNLNSGIHRVDLEDILESELKLSNNKRLEDPIPPPHASKRQAPRLHPKLTHKRPQTSIVHRPSMNLKKQIKPIQDKVNPRAVAYRSLPLIDRYQTSPWPRTMSKSNVRSLPLYQHTPGPKVHTVGFDENPITKELPLQKPAPLISSDPFPDTKELPPYHFPSARPYVRQEAVHAPPVPPYVPPMRINPPSFPSQMHHTPPHTTKIPTTLYYPITPSNFDPTKKPKTSYDKKKATMPKYVSSNSYRSNQEKKSKKLFXSHVDHPTSGTQYPMPSYNYKEPSLKFKDFGELAIAVTPKNVPHTGTTVKSYGVSSPEKSEIISLPDPRDNYFPKSLQFLSGVHSTTPNPPSPKYTTMKPPTISFTPSSFSIESTTSEYKLPQYDSHSPQVLRNVLSTTMKTPTKEYLHPVSAVTKSYQEYRSSTQHPENYGHKTTRIPQGIESPITQGYKYLKKINNIYDKYVEHSSPKDERDKQMDGSTQTELITAYQNLFSLLGFSTDFKSTFQHFMPLSNDRFKKQKQQRERQLFQDPPKRVPKGRIPAGNRGSEYPPDTEYRPSLHPPSHKKFHYKDNPEYESSPHDEYLNDDYHNVRLPIDGYKSPISNGPGKGSVIIKGDHEHPPDTQYIPPFHVDRSFSHEFFNSKMDRNLLLIDDEEMEQNEIDMMQSYLPPHIEYIHPASSRIDKTPSIKYLPPPPRTESHPHAKFILPTKEDMVKFRSYTVPSKEHGYLPPPKSMKRLVYPTQDTAALNKSNPSNIFHLKDQKYYKVPSKSGQQVNDSSLNIKVNSNNDKEQHKVTIVSSGNEKTNELKHSPHSINIEINIPSNDEINLLNGNEKFHVKRKIGDMFPTSRAIVYRPHLLPIKQKDEDYKGEYPPVTYDRGPKRNLHAHNIESHISDPTESKIPLHLDPVVSRLKPPLVKELKVPRLISTLERPSLNKYGSSNETQKSFPNYLPPHERNEKVPPNLLHDNPSKDPMEKFSLPQKDNSSGGIKLPGNKYLLAKYTKLNTAPDKNYLPPKYEKGLSVPDGEY Sbjct: 1 MTKRKRCIQNSPFRGWIIPGLVLSTLLGSCTQTSNGQEFTPYTNPLIDFSAIETNINSSTIEINNDNKISPELEKVFPKYAKKFASFEEDNLSQGNDAEMESLVKSSDFAVIDSQTESFGSVDDIEDHLPSHLLEEDDLMSEGTTVMLFNIFTPEEVSFLSSLVGEDVVEELKENNVLLETQEESKNVRPSSQEIDQGVSNIRESLKPYQKFLKDGFESTEEEGSSTNYPKDNIFEQRENTMKNMLNRLSDKYKKRLDDNSFHKESISSSDSNSEEKEKIKKMKVMIENLRAKLENSGKNDLNESSSYSAQRRTFENILGSKLRNLNSGIHRVDLEDILESELKLSNNKRLEDPIPPPHASKRQAPRLHPKLTHKRPQTSIVHRPSMNLKKQIKPIQDKVNPRAVAYRSLPLIDRYQTSPWPRTMSKSNVRSLPLYQHTPGPKVHTVGFDENPITKELPLQKPAPLISSDPFPDTKELPPYHFPSARPYVRQEAVHAPPVPPYVPPMRINPPSFPSQMHHTPPHTTKIPTTLYYPITPSNFDPTKKPKTSYDKKKATMPKYVSSNSYRSNQEKKSKKLFXSHVDHPTSGTQYPMPSYNYKEPSLKFKDFGELAIAVTPKNVPHTGTTVKSYGVSSPEKSEIISLPDPRDNYFPKSLQFLSGVHSTTPNPPSPKYTTMKPPTISFTPSSFSIESTTSEYKLPQYDSHSPQVLRNVLSTTMKTPTKEYLHPVSAVTKSYQEYRSSTQHPENYGHKTTRIPQGIESPITQGYKYLKKINNIYDKYVEHSSPKDERDKQMDGSTQTELITAYQNLFSLLGFSTDFKSTFQHFMPLSNDRFKKQKQQRERQLFQDPPKRVPKGRIPAGNRGSEYPPDTEYRPSLHPPSHKKFHYKDNPEYESSPHDEYLNDDYHNVRLPIDGYKSPISNGPGKGSVIIKGDHEHPPDTQYIPPFHVDRSFSHEFFNSKMDRNLLLIDDEEMEQNEIDMMQSYLPPHIEYIHPASSRIDKTPSIKYLPPPPRTESHPHAKFILPTKEDMVKFRSYTVPSKEHGYLPPPKSMKRLVYPTQDTAALNKSNPSNIFHLKDQKYYKVPSKSGQQVNDSSLNIKVNSNNDKEQHKVTIVSSGNEKTNELKHSPHSINIEINIPSNDEINLLNGNEKFHVKRKIGDMFPTSRAIVYRPHLLPIKQKDEDYKGEYPPVTYDRGPKRNLHAHNIESHISDPTESKIPLHLDPVVSRLKPPLVKELKVPRLISTLERPSLNKYGSSNETQKSFPNYLPPHERNEKVPPNLLHDNPSKDPMEKFSLPQKDNSSGGIKLPGNKYLLAKYTKLNTAPDKNYLPPKYEKGLSVPDGEY 1349 The following BLAST results are available for this feature:
BLAST of EMLSAG00000000613 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO) Total hits: 0
BLAST of EMLSAG00000000613 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA) Total hits: 8
BLAST of EMLSAG00000000613 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self) Total hits: 1
BLAST of EMLSAG00000000613 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt) Total hits: 0
BLAST of EMLSAG00000000613 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods) Total hits: 0
BLAST of EMLSAG00000000613 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017)) Total hits: 0
BLAST of EMLSAG00000000613 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins) Total hits: 0
Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Cross References
External references for this gene
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at LSalAtl2s109:556028..560502+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>EMLSAG00000000613-683379 ID=EMLSAG00000000613-683379|Name=EMLSAG00000000613|organism=Lepeophtheirus salmonis|type=gene|length=4475bp|location=Sequence derived from alignment at LSalAtl2s109:556028..560502+ (Lepeophtheirus salmonis)back to top Add to Basket
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