EMLSAG00000000634, EMLSAG00000000634-683400 (gene) Lepeophtheirus salmonis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of EMLSAG00000000634 vs. C. finmarchicus
Match: gi|592819914|gb|GAXK01134654.1| (TSA: Calanus finmarchicus comp92059_c0_seq1 transcribed RNA sequence) HSP 1 Score: 65.4698 bits (158), Expect = 1.886e-12 Identity = 36/91 (39.56%), Postives = 55/91 (60.44%), Query Frame = 0 Query: 13 SGRRMVQSSSLDGLLTLVGAVLLIASGGIACF------XXXXXXXXXXXXIGRRDYEAAGSLGVMTILTGILYLVDFFNVVYQRARFQNEY 97 GR +VQS+ +D ++ A LL+ SGG+ CF + ++NMNIGR + AG++GVM I++G++YL DFF V+ QR +Y Sbjct: 1469 EGREVVQSTVIDSAFCIIAACLLLTSGGMCCFNYNSVFALSGPPTISNMNIGRSSQQVAGAMGVMCIVSGLIYLADFFYVLCQRTALLQQY 1741
BLAST of EMLSAG00000000634 vs. C. finmarchicus
Match: gi|592768702|gb|GAXK01185866.1| (TSA: Calanus finmarchicus comp44758_c1_seq6 transcribed RNA sequence) HSP 1 Score: 30.8018 bits (68), Expect = 4.821e-1 Identity = 20/62 (32.26%), Postives = 35/62 (56.45%), Query Frame = 0 Query: 23 LDGLLTLVGAVLLIASGGIACFXXXXXXXXXXXXIGRRDYEAAGSLGVMTILTGILYLVDFF 84 L+ L+ LVGA+LL+ +G +A + + RD + +LGV+ I+ GI++ +DF Sbjct: 456 LEVLINLVGAILLLTAGSLAISYHSPRYDR-----NYRDSQEGLALGVIAIIAGIVFAIDFL 626
BLAST of EMLSAG00000000634 vs. C. finmarchicus
Match: gi|592768703|gb|GAXK01185865.1| (TSA: Calanus finmarchicus comp44758_c1_seq5 transcribed RNA sequence) HSP 1 Score: 30.8018 bits (68), Expect = 4.838e-1 Identity = 20/62 (32.26%), Postives = 35/62 (56.45%), Query Frame = 0 Query: 23 LDGLLTLVGAVLLIASGGIACFXXXXXXXXXXXXIGRRDYEAAGSLGVMTILTGILYLVDFF 84 L+ L+ LVGA+LL+ +G +A + + RD + +LGV+ I+ GI++ +DF Sbjct: 456 LEVLINLVGAILLLTAGSLAISYHSPRYDR-----NYRDSQEGLALGVIAIIAGIVFAIDFL 626
BLAST of EMLSAG00000000634 vs. C. finmarchicus
Match: gi|592768704|gb|GAXK01185864.1| (TSA: Calanus finmarchicus comp44758_c1_seq4 transcribed RNA sequence) HSP 1 Score: 30.8018 bits (68), Expect = 5.153e-1 Identity = 21/62 (33.87%), Postives = 36/62 (58.06%), Query Frame = 0 Query: 23 LDGLLTLVGAVLLIASGGIACFXXXXXXXXXXXXIGRRDYEAAGSLGVMTILTGILYLVDFF 84 L+ L+ LVGA+LL+ +G +A + + N RD + +LGV+ I+ GI++ +DF Sbjct: 595 LEVLINLVGAILLLTAGSLAISYHSPRYDRNY-----RDSQEGLALGVIAIIAGIVFAIDFL 765
BLAST of EMLSAG00000000634 vs. C. finmarchicus
Match: gi|592768705|gb|GAXK01185863.1| (TSA: Calanus finmarchicus comp44758_c1_seq3 transcribed RNA sequence) HSP 1 Score: 30.8018 bits (68), Expect = 5.166e-1 Identity = 21/62 (33.87%), Postives = 36/62 (58.06%), Query Frame = 0 Query: 23 LDGLLTLVGAVLLIASGGIACFXXXXXXXXXXXXIGRRDYEAAGSLGVMTILTGILYLVDFF 84 L+ L+ LVGA+LL+ +G +A + + N RD + +LGV+ I+ GI++ +DF Sbjct: 595 LEVLINLVGAILLLTAGSLAISYHSPRYDRNY-----RDSQEGLALGVIAIIAGIVFAIDFL 765
BLAST of EMLSAG00000000634 vs. C. finmarchicus
Match: gi|592802545|gb|GAXK01152023.1| (TSA: Calanus finmarchicus comp927091_c0_seq1 transcribed RNA sequence) HSP 1 Score: 30.0314 bits (66), Expect = 8.070e-1 Identity = 24/74 (32.43%), Postives = 38/74 (51.35%), Query Frame = 0 Query: 19 QSSSLDGLLTLVGAVLLIASGGIACFXXXXXXXXXXXXIGRRDYEAAGSLGVMTILTGILYLVDFFNVVYQRAR 92 S LD L ++VGA L IASG A ++ + + ++ +LG I+TGI+ L+D +V + AR Sbjct: 273 MSWKLDSLFSIVGAFLYIASGSCA------IDYNTSLTLAKESRDSGLALGSFCIITGIVLLMDAAFLVTKYAR 476
BLAST of EMLSAG00000000634 vs. C. finmarchicus
Match: gi|592768706|gb|GAXK01185862.1| (TSA: Calanus finmarchicus comp44758_c1_seq2 transcribed RNA sequence) HSP 1 Score: 30.0314 bits (66), Expect = 9.670e-1 Identity = 21/62 (33.87%), Postives = 36/62 (58.06%), Query Frame = 0 Query: 23 LDGLLTLVGAVLLIASGGIACFXXXXXXXXXXXXIGRRDYEAAGSLGVMTILTGILYLVDFF 84 L+ L+ LVGA+LL+ +G +A + + N RD + +LGV+ I+ GI++ +DF Sbjct: 632 LEVLINLVGAILLLTAGSLAISYHSPRYDRN-----YRDSQEGLALGVIAIIAGIVFAIDFL 802
BLAST of EMLSAG00000000634 vs. C. finmarchicus
Match: gi|592768707|gb|GAXK01185861.1| (TSA: Calanus finmarchicus comp44758_c1_seq1 transcribed RNA sequence) HSP 1 Score: 30.0314 bits (66), Expect = 9.690e-1 Identity = 21/62 (33.87%), Postives = 36/62 (58.06%), Query Frame = 0 Query: 23 LDGLLTLVGAVLLIASGGIACFXXXXXXXXXXXXIGRRDYEAAGSLGVMTILTGILYLVDFF 84 L+ L+ LVGA+LL+ +G +A + + N RD + +LGV+ I+ GI++ +DF Sbjct: 632 LEVLINLVGAILLLTAGSLAISYHSPRYDRN-----YRDSQEGLALGVIAIIAGIVFAIDFL 802
BLAST of EMLSAG00000000634 vs. L. salmonis peptides
Match: EMLSAP00000000634 (pep:novel supercontig:LSalAtl2s:LSalAtl2s109:941098:948805:-1 gene:EMLSAG00000000634 transcript:EMLSAT00000000634 description:"maker-LSalAtl2s109-snap-gene-9.9") HSP 1 Score: 198.364 bits (503), Expect = 1.006e-66 Identity = 97/97 (100.00%), Postives = 97/97 (100.00%), Query Frame = 0 Query: 1 MFNAPSDWKSRKSGRRMVQSSSLDGLLTLVGAVLLIASGGIACFNWNSNSNMNNMNIGRRDYEAAGSLGVMTILTGILYLVDFFNVVYQRARFQNEY 97 MFNAPSDWKSRKSGRRMVQSSSLDGLLTLVGAVLLIASGGIACFNWNSNSNMNNMNIGRRDYEAAGSLGVMTILTGILYLVDFFNVVYQRARFQNEY Sbjct: 1 MFNAPSDWKSRKSGRRMVQSSSLDGLLTLVGAVLLIASGGIACFNWNSNSNMNNMNIGRRDYEAAGSLGVMTILTGILYLVDFFNVVYQRARFQNEY 97 The following BLAST results are available for this feature:
BLAST of EMLSAG00000000634 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO) Total hits: 0
BLAST of EMLSAG00000000634 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA) Total hits: 8
BLAST of EMLSAG00000000634 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self) Total hits: 1
BLAST of EMLSAG00000000634 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt) Total hits: 0
BLAST of EMLSAG00000000634 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods) Total hits: 0
BLAST of EMLSAG00000000634 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017)) Total hits: 0
BLAST of EMLSAG00000000634 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins) Total hits: 0
Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Cross References
External references for this gene
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at LSalAtl2s109:941098..948805- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>EMLSAG00000000634-683400 ID=EMLSAG00000000634-683400|Name=EMLSAG00000000634|organism=Lepeophtheirus salmonis|type=gene|length=7708bp|location=Sequence derived from alignment at LSalAtl2s109:941098..948805- (Lepeophtheirus salmonis)back to top Add to Basket
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