EMLSAG00000000637, EMLSAG00000000637-683403 (gene) Lepeophtheirus salmonis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of EMLSAG00000000637 vs. GO
Match: - (symbol:NSUN4 "Uncharacterized protein" species:9823 "Sus scrofa" [GO:0005762 "mitochondrial large ribosomal subunit" evidence=IEA] Pfam:PF01189 GO:GO:0005762 InterPro:IPR001678 InterPro:IPR023267 PRINTS:PR02008 GeneTree:ENSGT00660000095341 OrthoDB:EOG789CB3 TreeFam:TF321304 CTD:387338 OMA:ACSPNLR EMBL:CU694667 RefSeq:XP_003128070.1 UniGene:Ssc.37517 Ensembl:ENSSSCT00000004317 GeneID:100524686 KEGG:ssc:100524686 Uniprot:F1S3W1) HSP 1 Score: 46.2098 bits (108), Expect = 8.939e-6 Identity = 23/50 (46.00%), Postives = 34/50 (68.00%), Query Frame = 0 Query: 9 SALLCVKPGGYVVYSTCSLSPAQNDGVVHASLKELWEDAQLEFSVWVQIK 58 + LL KPGG+VVYSTCSLS QN+ VV +++ L ++S+ VQ++ Sbjct: 293 AGLLATKPGGHVVYSTCSLSHLQNEYVVQGTIELLAN----QYSIEVQVE 338
BLAST of EMLSAG00000000637 vs. GO
Match: - (symbol:NSUN4 "5-methylcytosine rRNA methyltransferase NSUN4" species:9913 "Bos taurus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0005762 "mitochondrial large ribosomal subunit" evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA] [GO:0008168 "methyltransferase activity" evidence=IEA] Pfam:PF01189 GO:GO:0003723 GO:GO:0008168 GO:GO:0005762 GO:GO:0006364 eggNOG:COG0144 InterPro:IPR001678 InterPro:IPR023267 PRINTS:PR02008 PROSITE:PS51686 GeneTree:ENSGT00660000095341 HOGENOM:HOG000017426 HOVERGEN:HBG106892 OrthoDB:EOG789CB3 TreeFam:TF321304 EMBL:BT026151 EMBL:DY454541 RefSeq:NP_001178310.1 UniGene:Bt.36843 ProteinModelPortal:Q0V8R7 STRING:9913.ENSBTAP00000021120 PRIDE:Q0V8R7 Ensembl:ENSBTAT00000021120 GeneID:618779 KEGG:bta:618779 CTD:387338 InParanoid:Q0V8R7 OMA:ACSPNLR NextBio:20901346 Uniprot:Q0V8R7) HSP 1 Score: 45.8246 bits (107), Expect = 1.164e-5 Identity = 23/50 (46.00%), Postives = 36/50 (72.00%), Query Frame = 0 Query: 9 SALLCVKPGGYVVYSTCSLSPAQNDGVVHASLKELWEDAQLEFSVWVQIK 58 + LL KPGG++VYSTCSLS QN+ VV ++ EL ++ ++S+ VQ++ Sbjct: 294 AGLLATKPGGHIVYSTCSLSHLQNEYVVQGAI-ELLDN---QYSIKVQVE 339
BLAST of EMLSAG00000000637 vs. GO
Match: - (symbol:NSUN4 "5-methylcytosine rRNA methyltransferase NSUN4" species:9606 "Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI] [GO:0005762 "mitochondrial large ribosomal subunit" evidence=IDA] [GO:0006364 "rRNA processing" evidence=IEA] [GO:0008168 "methyltransferase activity" evidence=IEA] Pfam:PF01189 EMBL:CH471059 GO:GO:0003723 GO:GO:0008168 GO:GO:0005762 GO:GO:0006364 EMBL:AL122001 PDB:4FP9 PDB:4FZV PDBsum:4FP9 PDBsum:4FZV eggNOG:COG0144 InterPro:IPR001678 InterPro:IPR023267 PRINTS:PR02008 PROSITE:PS51686 HOGENOM:HOG000017426 HOVERGEN:HBG106892 OrthoDB:EOG789CB3 TreeFam:TF321304 CTD:387338 OMA:ACSPNLR EMBL:AK021577 EMBL:AK057420 EMBL:AK291741 EMBL:AK295003 EMBL:BC014441 EMBL:BC016907 RefSeq:NP_001243056.1 RefSeq:NP_001243057.1 RefSeq:NP_950245.2 UniGene:Hs.163424 ProteinModelPortal:Q96CB9 SMR:Q96CB9 BioGrid:132288 DIP:DIP-58104N IntAct:Q96CB9 MINT:MINT-1474456 STRING:9606.ENSP00000419740 PhosphoSite:Q96CB9 DMDM:152125805 PaxDb:Q96CB9 PRIDE:Q96CB9 Ensembl:ENST00000474844 Ensembl:ENST00000536062 Ensembl:ENST00000537428 GeneID:387338 KEGG:hsa:387338 UCSC:uc001cpr.2 GeneCards:GC01P046805 HGNC:HGNC:31802 HPA:HPA027958 HPA:HPA028489 MIM:615394 neXtProt:NX_Q96CB9 PharmGKB:PA134953046 InParanoid:Q96CB9 PhylomeDB:Q96CB9 GenomeRNAi:387338 NextBio:101304 PRO:PR:Q96CB9 ArrayExpress:Q96CB9 Bgee:Q96CB9 CleanEx:HS_NSUN4 Genevestigator:Q96CB9 Uniprot:Q96CB9) HSP 1 Score: 45.8246 bits (107), Expect = 1.220e-5 Identity = 23/50 (46.00%), Postives = 34/50 (68.00%), Query Frame = 0 Query: 9 SALLCVKPGGYVVYSTCSLSPAQNDGVVHASLKELWEDAQLEFSVWVQIK 58 + LL KPGG+VVYSTCSLS QN+ VV +++ L ++S+ VQ++ Sbjct: 294 AGLLATKPGGHVVYSTCSLSHLQNEYVVQGAIELLAN----QYSIQVQVE 339
BLAST of EMLSAG00000000637 vs. GO
Match: - (symbol:NSUN4 "Uncharacterized protein" species:9615 "Canis lupus familiaris" [GO:0005762 "mitochondrial large ribosomal subunit" evidence=IEA] Pfam:PF01189 GO:GO:0005762 InterPro:IPR001678 InterPro:IPR023267 PRINTS:PR02008 GeneTree:ENSGT00660000095341 OrthoDB:EOG789CB3 TreeFam:TF321304 OMA:ACSPNLR EMBL:AAEX03009775 Ensembl:ENSCAFT00000047805 Uniprot:J9P4A4) HSP 1 Score: 45.4394 bits (106), Expect = 1.724e-5 Identity = 22/50 (44.00%), Postives = 34/50 (68.00%), Query Frame = 0 Query: 9 SALLCVKPGGYVVYSTCSLSPAQNDGVVHASLKELWEDAQLEFSVWVQIK 58 + LL KPGG++VYSTCSLS QN+ VV +++ L ++S+ VQ++ Sbjct: 294 AGLLATKPGGHIVYSTCSLSHLQNEYVVQGTIEFLAN----QYSIKVQVE 339
BLAST of EMLSAG00000000637 vs. GO
Match: - (symbol:orf19.518 species:5476 "Candida albicans" [GO:0016428 "tRNA (cytosine-5-)-methyltransferase activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0030488 "tRNA methylation" evidence=IEA] InterPro:IPR018314 InterPro:IPR023270 PRINTS:PR02011 PROSITE:PS01153 PROSITE:PS51606 Pfam:PF01189 GO:GO:0003723 EMBL:AACQ01000054 GO:GO:0030488 KO:K15334 OrthoDB:EOG7T1RN4 GO:GO:0016428 InterPro:IPR001678 InterPro:IPR023267 PRINTS:PR02008 RefSeq:XP_717471.1 ProteinModelPortal:Q5A6Y3 GeneID:3640854 KEGG:cal:CaO19.8149 CGD:CAL0066137 Uniprot:Q5A6Y3) HSP 1 Score: 43.8986 bits (102), Expect = 7.307e-5 Identity = 22/54 (40.74%), Postives = 35/54 (64.81%), Query Frame = 0 Query: 10 ALLCVKPGGYVVYSTCSLSPAQNDGVVHASLKELWEDAQLEFSVWVQIKLINLN 63 L +K GG +VYSTCSLSP +N+ +V ++L++ W D QI+L+N++ Sbjct: 344 GLQLLKKGGRLVYSTCSLSPIENEAIVASALRK-WGD---------QIRLVNVD 387
BLAST of EMLSAG00000000637 vs. GO
Match: - (symbol:Nsun4 "NOP2/Sun domain family, member 4" species:10116 "Rattus norvegicus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575 "cellular_component" evidence=ND] [GO:0005739 "mitochondrion" evidence=ISO] [GO:0005762 "mitochondrial large ribosomal subunit" evidence=ISO] [GO:0008150 "biological_process" evidence=ND] Pfam:PF01189 RGD:1559652 EMBL:CH474008 InterPro:IPR001678 InterPro:IPR023267 PRINTS:PR02008 GeneTree:ENSGT00660000095341 OrthoDB:EOG789CB3 TreeFam:TF321304 CTD:387338 OMA:ACSPNLR EMBL:AABR06039526 EMBL:AABR06039500 RefSeq:NP_001100148.1 UniGene:Rn.49080 Ensembl:ENSRNOT00000016013 Ensembl:ENSRNOT00000016714 GeneID:298426 KEGG:rno:298426 UCSC:RGD:1559652 NextBio:643659 PRO:PR:D4A099 Uniprot:D4A099) HSP 1 Score: 43.1282 bits (100), Expect = 9.323e-5 Identity = 25/66 (37.88%), Postives = 39/66 (59.09%), Query Frame = 0 Query: 9 SALLCVKPGGYVVYSTCSLSPAQNDGVVHASLKELWEDAQLEFSVWVQI-------KLINLNYCYI 67 + LL KPGG+VVYSTCSLS QN+ VV +++ L ++++ VQ+ KL +C++ Sbjct: 291 AGLLATKPGGHVVYSTCSLSHLQNEYVVQGAIELLAN----QYNIKVQVEDLSHFRKLFMDTFCFL 352
BLAST of EMLSAG00000000637 vs. GO
Match: - (symbol:Nsun4 "NOL1/NOP2/Sun domain family, member 4" species:10090 "Mus musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0003723 "RNA binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IDA] [GO:0005762 "mitochondrial large ribosomal subunit" evidence=ISO] [GO:0006364 "rRNA processing" evidence=IEA] [GO:0008150 "biological_process" evidence=ND] [GO:0008168 "methyltransferase activity" evidence=IEA] [GO:0016740 "transferase activity" evidence=IEA] [GO:0032259 "methylation" evidence=IEA] Pfam:PF01189 MGI:MGI:1919431 GO:GO:0003723 GO:GO:0008168 GO:GO:0005762 GO:GO:0006364 EMBL:AL627105 eggNOG:COG0144 InterPro:IPR001678 InterPro:IPR023267 PRINTS:PR02008 PROSITE:PS51686 GeneTree:ENSGT00660000095341 HOGENOM:HOG000017426 HOVERGEN:HBG106892 OrthoDB:EOG789CB3 TreeFam:TF321304 CTD:387338 OMA:ACSPNLR EMBL:AK009285 EMBL:AK012994 EMBL:BC024628 RefSeq:NP_082418.1 UniGene:Mm.282560 ProteinModelPortal:Q9CZ57 SMR:Q9CZ57 STRING:10090.ENSMUSP00000030475 PhosphoSite:Q9CZ57 PaxDb:Q9CZ57 PRIDE:Q9CZ57 Ensembl:ENSMUST00000030474 Ensembl:ENSMUST00000030475 GeneID:72181 KEGG:mmu:72181 UCSC:uc008ufu.2 UCSC:uc012djh.1 InParanoid:Q9CZ57 NextBio:335641 PRO:PR:Q9CZ57 Bgee:Q9CZ57 CleanEx:MM_NSUN4 Genevestigator:Q9CZ57 Uniprot:Q9CZ57) HSP 1 Score: 42.743 bits (99), Expect = 1.454e-4 Identity = 25/66 (37.88%), Postives = 38/66 (57.58%), Query Frame = 0 Query: 9 SALLCVKPGGYVVYSTCSLSPAQNDGVVHASLKELWEDAQLEFSVWVQI-------KLINLNYCYI 67 + LL KPGG+VVYSTCSLS QN+ VV +++ L ++++ VQ+ KL +C+ Sbjct: 291 AGLLATKPGGHVVYSTCSLSHLQNEYVVQGAIELLAN----QYNIKVQVEDLSHFRKLFMDTFCFF 352
BLAST of EMLSAG00000000637 vs. GO
Match: - (symbol:CPAR2_205180 species:5480 "Candida parapsilosis" [GO:0030488 "tRNA methylation" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0016428 "tRNA (cytosine-5-)-methyltransferase activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR018314 InterPro:IPR023270 PRINTS:PR02011 PROSITE:PS01153 PROSITE:PS51606 Pfam:PF01189 GO:GO:0003723 GO:GO:0030488 OrthoDB:EOG7T1RN4 GO:GO:0016428 InterPro:IPR001678 InterPro:IPR023267 PRINTS:PR02008 EMBL:HE605206 Uniprot:G8BG91) HSP 1 Score: 42.3578 bits (98), Expect = 2.066e-4 Identity = 23/54 (42.59%), Postives = 34/54 (62.96%), Query Frame = 0 Query: 10 ALLCVKPGGYVVYSTCSLSPAQNDGVVHASLKELWEDAQLEFSVWVQIKLINLN 63 L +K GG +VYSTCSLSP +N+ VV +L+E W D +IKL++++ Sbjct: 292 GLQLLKKGGRLVYSTCSLSPIENEAVVAEALRE-WGD---------KIKLVDVS 335
BLAST of EMLSAG00000000637 vs. GO
Match: - (symbol:nsun3 "NOP2/Sun domain family, member 3" species:7955 "Danio rerio" [GO:0005575 "cellular_component" evidence=ND] [GO:0016740 "transferase activity" evidence=IEA] [GO:0008168 "methyltransferase activity" evidence=IEA] [GO:0032259 "methylation" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] Pfam:PF01189 ZFIN:ZDB-GENE-050706-95 InterPro:IPR001678 InterPro:IPR023267 PRINTS:PR02008 GeneTree:ENSGT00660000095341 OMA:GYLHCNE OrthoDB:EOG789CB3 TreeFam:TF321304 EMBL:CR762462 EMBL:CU915566 Ensembl:ENSDART00000131664 PRO:PR:F6NJM6 ArrayExpress:F6NJM6 Bgee:F6NJM6 Uniprot:F6NJM6) HSP 1 Score: 40.4318 bits (93), Expect = 7.759e-4 Identity = 19/32 (59.38%), Postives = 23/32 (71.88%), Query Frame = 0 Query: 9 SALLCVKPGGYVVYSTCSLSPAQNDGVVHASL 40 SAL V+PGG VVYSTC++S A+N VV L Sbjct: 288 SALAAVRPGGIVVYSTCTMSRAENQSVVEEVL 319
BLAST of EMLSAG00000000637 vs. C. finmarchicus
Match: gi|592781683|gb|GAXK01172885.1| (TSA: Calanus finmarchicus comp132139_c1_seq1 transcribed RNA sequence) HSP 1 Score: 64.3142 bits (155), Expect = 2.205e-12 Identity = 26/47 (55.32%), Postives = 35/47 (74.47%), Query Frame = 0 Query: 7 FRSALLCVKPGGYVVYSTCSLSPAQNDGVVHASLKELWEDAQLEFSV 53 ++ LL + PGG +VYSTC+LSP QNDGVVH L ++WE+ L+F V Sbjct: 185 LKAGLLNLAPGGSLVYSTCTLSPVQNDGVVHKVLGQIWEETNLDFEV 325
BLAST of EMLSAG00000000637 vs. C. finmarchicus
Match: gi|592777904|gb|GAXK01176664.1| (TSA: Calanus finmarchicus comp3612_c0_seq1 transcribed RNA sequence) HSP 1 Score: 36.965 bits (84), Expect = 3.974e-3 Identity = 15/28 (53.57%), Postives = 21/28 (75.00%), Query Frame = 0 Query: 15 KPGGYVVYSTCSLSPAQNDGVVHASLKE 42 K GGY+VYSTCS+ P +N+ VV L++ Sbjct: 1516 KTGGYLVYSTCSILPEENENVVDYVLRK 1599
BLAST of EMLSAG00000000637 vs. C. finmarchicus
Match: gi|592941039|gb|GAXK01017514.1| (TSA: Calanus finmarchicus comp73214_c11_seq1 transcribed RNA sequence) HSP 1 Score: 36.1946 bits (82), Expect = 6.840e-3 Identity = 27/71 (38.03%), Postives = 37/71 (52.11%), Query Frame = 0 Query: 8 RSALLCVKPGGYVVYSTCSLSPAQNDGVVHASLKELWEDAQLEFSVWVQIKLINLNYCYILGYLNSSQQLE 78 R AL + GG +VYSTCS P +N+ VV L+++ QL V++K +L LNSS LE Sbjct: 966 RRALEMLAVGGRMVYSTCSFHPLENEAVVARLLQDMEGRLQL-----VEVK-------DMLPGLNSSPGLE 1142
BLAST of EMLSAG00000000637 vs. C. finmarchicus
Match: gi|592941040|gb|GAXK01017513.1| (TSA: Calanus finmarchicus comp73214_c3_seq2 transcribed RNA sequence) HSP 1 Score: 36.1946 bits (82), Expect = 7.783e-3 Identity = 27/71 (38.03%), Postives = 37/71 (52.11%), Query Frame = 0 Query: 8 RSALLCVKPGGYVVYSTCSLSPAQNDGVVHASLKELWEDAQLEFSVWVQIKLINLNYCYILGYLNSSQQLE 78 R AL + GG +VYSTCS P +N+ VV L+++ QL V++K +L LNSS LE Sbjct: 1021 RRALEMLAVGGRMVYSTCSFHPLENEAVVARLLQDMEGRLQL-----VEVK-------DMLPGLNSSPGLE 1197
BLAST of EMLSAG00000000637 vs. C. finmarchicus
Match: gi|592941041|gb|GAXK01017512.1| (TSA: Calanus finmarchicus comp73214_c3_seq1 transcribed RNA sequence) HSP 1 Score: 36.1946 bits (82), Expect = 7.848e-3 Identity = 27/71 (38.03%), Postives = 37/71 (52.11%), Query Frame = 0 Query: 8 RSALLCVKPGGYVVYSTCSLSPAQNDGVVHASLKELWEDAQLEFSVWVQIKLINLNYCYILGYLNSSQQLE 78 R AL + GG +VYSTCS P +N+ VV L+++ QL V++K +L LNSS LE Sbjct: 1021 RRALEMLAVGGRMVYSTCSFHPLENEAVVARLLQDMEGRLQL-----VEVK-------DMLPGLNSSPGLE 1197
BLAST of EMLSAG00000000637 vs. C. finmarchicus
Match: gi|592776073|gb|GAXK01178495.1| (TSA: Calanus finmarchicus comp15396_c0_seq4 transcribed RNA sequence) HSP 1 Score: 35.8094 bits (81), Expect = 8.389e-3 Identity = 18/48 (37.50%), Postives = 29/48 (60.42%), Query Frame = 0 Query: 17 GGYVVYSTCSLSPAQNDGVVHASLKELWEDAQLEFSVWVQIKLINLNY 64 GG +VYSTCS +P +++ V+ L+E + +L V ++ KL L Y Sbjct: 12 GGRMVYSTCSFNPIEDEAVLARILQETGDSVRL---VEIKDKLPGLKY 146
BLAST of EMLSAG00000000637 vs. C. finmarchicus
Match: gi|592776075|gb|GAXK01178493.1| (TSA: Calanus finmarchicus comp15396_c0_seq2 transcribed RNA sequence) HSP 1 Score: 35.8094 bits (81), Expect = 9.063e-3 Identity = 18/48 (37.50%), Postives = 29/48 (60.42%), Query Frame = 0 Query: 17 GGYVVYSTCSLSPAQNDGVVHASLKELWEDAQLEFSVWVQIKLINLNY 64 GG +VYSTCS +P +++ V+ L+E + +L V ++ KL L Y Sbjct: 12 GGRMVYSTCSFNPIEDEAVLARILQETGDSVRL---VEIKDKLPGLKY 146
BLAST of EMLSAG00000000637 vs. C. finmarchicus
Match: gi|592776074|gb|GAXK01178494.1| (TSA: Calanus finmarchicus comp15396_c0_seq3 transcribed RNA sequence) HSP 1 Score: 33.4982 bits (75), Expect = 4.719e-2 Identity = 18/48 (37.50%), Postives = 29/48 (60.42%), Query Frame = 0 Query: 17 GGYVVYSTCSLSPAQNDGVVHASLKELWEDAQLEFSVWVQIKLINLNY 64 GG +VYSTCS +P +++ V+ L+E + +L V ++ KL L Y Sbjct: 70 GGRMVYSTCSFNPIEDEAVLARILQETGDSVRL---VEIKDKLPGLKY 204
BLAST of EMLSAG00000000637 vs. C. finmarchicus
Match: gi|592776076|gb|GAXK01178492.1| (TSA: Calanus finmarchicus comp15396_c0_seq1 transcribed RNA sequence) HSP 1 Score: 33.4982 bits (75), Expect = 4.972e-2 Identity = 18/48 (37.50%), Postives = 29/48 (60.42%), Query Frame = 0 Query: 17 GGYVVYSTCSLSPAQNDGVVHASLKELWEDAQLEFSVWVQIKLINLNY 64 GG +VYSTCS +P +++ V+ L+E + +L V ++ KL L Y Sbjct: 70 GGRMVYSTCSFNPIEDEAVLARILQETGDSVRL---VEIKDKLPGLKY 204
BLAST of EMLSAG00000000637 vs. C. finmarchicus
Match: gi|592776063|gb|GAXK01178505.1| (TSA: Calanus finmarchicus comp15396_c5_seq2 transcribed RNA sequence) HSP 1 Score: 33.4982 bits (75), Expect = 5.150e-2 Identity = 18/48 (37.50%), Postives = 29/48 (60.42%), Query Frame = 0 Query: 17 GGYVVYSTCSLSPAQNDGVVHASLKELWEDAQLEFSVWVQIKLINLNY 64 GG +VYSTCS +P +++ V+ L+E + +L V ++ KL L Y Sbjct: 1436 GGRMVYSTCSFNPIEDEAVLARILQETGDSVRL---VEIKDKLPGLKY 1570
BLAST of EMLSAG00000000637 vs. L. salmonis peptides
Match: EMLSAP00000000637 (pep:novel supercontig:LSalAtl2s:LSalAtl2s109:658751:659155:-1 gene:EMLSAG00000000637 transcript:EMLSAT00000000637 description:"snap-LSalAtl2s109-processed-gene-6.37") HSP 1 Score: 171.785 bits (434), Expect = 8.058e-57 Identity = 83/83 (100.00%), Postives = 83/83 (100.00%), Query Frame = 0 Query: 1 MSTNHSFRSALLCVKPGGYVVYSTCSLSPAQNDGVVHASLKELWEDAQLEFSVWVQIKLINLNYCYILGYLNSSQQLEYKVYQ 83 MSTNHSFRSALLCVKPGGYVVYSTCSLSPAQNDGVVHASLKELWEDAQLEFSVWVQIKLINLNYCYILGYLNSSQQLEYKVYQ Sbjct: 1 MSTNHSFRSALLCVKPGGYVVYSTCSLSPAQNDGVVHASLKELWEDAQLEFSVWVQIKLINLNYCYILGYLNSSQQLEYKVYQ 83
BLAST of EMLSAG00000000637 vs. Select Arthropod Genomes
Match: gb|EEC16154.1| (conserved hypothetical protein [Ixodes scapularis]) HSP 1 Score: 65.855 bits (159), Expect = 6.582e-14 Identity = 28/41 (68.29%), Postives = 34/41 (82.93%), Query Frame = 0 Query: 13 CVKPGGYVVYSTCSLSPAQNDGVVHASLKELWEDAQLEFSV 53 C+ PGG +VYSTCSLSP QNDGVVH +L++LWE LEF+V Sbjct: 151 CLLPGGSLVYSTCSLSPIQNDGVVHMALQQLWETTPLEFAV 191
BLAST of EMLSAG00000000637 vs. Select Arthropod Genomes
Match: gb|EFA08513.1| (5-methylcytosine rRNA methyltransferase NSUN4-like Protein [Tribolium castaneum]) HSP 1 Score: 65.0846 bits (157), Expect = 3.103e-13 Identity = 29/45 (64.44%), Postives = 35/45 (77.78%), Query Frame = 0 Query: 9 SALLCVKPGGYVVYSTCSLSPAQNDGVVHASLKELWEDAQLEFSV 53 +AL VK GG VVYSTCSLSP QNDGVVH +LK +WE+ ++E V Sbjct: 368 NALKLVKKGGVVVYSTCSLSPIQNDGVVHMTLKRIWEETKIEVVV 412
BLAST of EMLSAG00000000637 vs. Select Arthropod Genomes
Match: gb|KFM60440.1| (putative methyltransferase NSUN4, partial [Stegodyphus mimosarum]) HSP 1 Score: 52.7582 bits (125), Expect = 8.421e-10 Identity = 25/45 (55.56%), Postives = 32/45 (71.11%), Query Frame = 0 Query: 9 SALLCVKPGGYVVYSTCSLSPAQNDGVVHASLKELWEDAQLEFSV 53 +AL +K G +VYSTCSLSP QNDGVVH +L +L ++ EF V Sbjct: 13 AALKALKLNGSLVYSTCSLSPLQNDGVVHMALSKLLSESTFEFIV 57
BLAST of EMLSAG00000000637 vs. Select Arthropod Genomes
Match: EEB16854.1 (conserved hypothetical protein [Pediculus humanus corporis]) HSP 1 Score: 54.299 bits (129), Expect = 2.371e-9 Identity = 24/48 (50.00%), Postives = 36/48 (75.00%), Query Frame = 0 Query: 6 SFRSALLCVKPGGYVVYSTCSLSPAQNDGVVHASLKELWEDAQLEFSV 53 + +AL VKPGG VVY+T ++SP QNDGVV A+++ + E++ + FSV Sbjct: 417 TLANALKMVKPGGTVVYTTGTMSPVQNDGVVDAAIRMVMENSDMRFSV 464
BLAST of EMLSAG00000000637 vs. Select Arthropod Genomes
Match: XP_006568521.1 (PREDICTED: 5-methylcytosine rRNA methyltransferase NSUN4 [Apis mellifera]) HSP 1 Score: 52.7582 bits (125), Expect = 6.476e-9 Identity = 24/38 (63.16%), Postives = 29/38 (76.32%), Query Frame = 0 Query: 9 SALLCVKPGGYVVYSTCSLSPAQNDGVVHASLKELWED 46 +AL V GG VVYSTCSLSP QNDGVV +LK+ W++ Sbjct: 412 NALKLVSVGGTVVYSTCSLSPIQNDGVVQVALKKAWQE 449
BLAST of EMLSAG00000000637 vs. Select Arthropod Genomes
Match: gb|KPM11188.1| (methyltransferase sun-like protein [Sarcoptes scabiei]) HSP 1 Score: 52.7582 bits (125), Expect = 8.437e-9 Identity = 24/42 (57.14%), Postives = 34/42 (80.95%), Query Frame = 0 Query: 10 ALLCVKPGGYVVYSTCSLSPAQNDGVVHASLKELWEDAQLEF 51 A+ V+ GG +VYSTCSLSP QNDGVVH ++K+L ++A +E+ Sbjct: 411 AMKSVRVGGTIVYSTCSLSPIQNDGVVHMAIKQL-QNAPVEY 451
BLAST of EMLSAG00000000637 vs. Select Arthropod Genomes
Match: EAL39544.3 (AGAP008523-PA [Anopheles gambiae str. PEST]) HSP 1 Score: 51.6026 bits (122), Expect = 1.722e-8 Identity = 26/54 (48.15%), Postives = 36/54 (66.67%), Query Frame = 0 Query: 9 SALLCVKPGGYVVYSTCSLSPAQNDGVVHASLKELWEDAQLEFSVWVQIKLINL 62 + L ++PGG +VYSTCSLSP QNDGVVH +L ++ E + V IK ++L Sbjct: 419 NCLKLLRPGGTLVYSTCSLSPVQNDGVVHMALSNVFS----EIGMTVTIKDLSL 468
BLAST of EMLSAG00000000637 vs. Select Arthropod Genomes
Match: AAF51412.1 (lethal (2) 10685 [Drosophila melanogaster]) HSP 1 Score: 51.2174 bits (121), Expect = 2.750e-8 Identity = 24/50 (48.00%), Postives = 35/50 (70.00%), Query Frame = 0 Query: 9 SALLCVKPGGYVVYSTCSLSPAQNDGVVHASLKELWEDAQLEFSVWVQIK 58 + L ++PGG +VYSTCSLSP QNDGVVH +L++++ E+ + IK Sbjct: 411 NCLRLLRPGGSLVYSTCSLSPIQNDGVVHMALQKVFT----EYGITTTIK 456
BLAST of EMLSAG00000000637 vs. nr
Match: gi|985419919|ref|XP_015375458.1| (PREDICTED: 5-methylcytosine rRNA methyltransferase NSUN4-like [Diuraphis noxia]) HSP 1 Score: 58.151 bits (139), Expect = 3.870e-9 Identity = 25/41 (60.98%), Postives = 32/41 (78.05%), Query Frame = 0 Query: 7 FRSALLCVKPGGYVVYSTCSLSPAQNDGVVHASLKELWEDA 47 +SAL+ + GG VVYSTCSLSP QNDGVV +LK++WE+ Sbjct: 21 LKSALMNIAVGGTVVYSTCSLSPIQNDGVVKMALKKIWEET 61
BLAST of EMLSAG00000000637 vs. nr
Match: gi|987916603|ref|XP_015434305.1| (PREDICTED: 5-methylcytosine rRNA methyltransferase NSUN4 [Dufourea novaeangliae]) HSP 1 Score: 61.2326 bits (147), Expect = 4.027e-9 Identity = 26/37 (70.27%), Postives = 31/37 (83.78%), Query Frame = 0 Query: 9 SALLCVKPGGYVVYSTCSLSPAQNDGVVHASLKELWE 45 +AL V+PGG VVY+TCSLSP QNDGVVH +LK+ WE Sbjct: 416 NALKLVRPGGTVVYATCSLSPIQNDGVVHVALKKAWE 452
BLAST of EMLSAG00000000637 vs. nr
Match: gi|1073712379|gb|JAT99117.1| (putative trna and rrna cytosine-c5-methylase translation, partial [Amblyomma aureolatum]) HSP 1 Score: 60.8474 bits (146), Expect = 5.350e-9 Identity = 26/43 (60.47%), Postives = 34/43 (79.07%), Query Frame = 0 Query: 10 ALLC-----VKPGGYVVYSTCSLSPAQNDGVVHASLKELWEDA 47 +LLC ++PGG +VYSTCSLSP QNDGVVH +L+ELW+ + Sbjct: 328 SLLCRGLSMLRPGGSLVYSTCSLSPVQNDGVVHMALQELWQKS 370
BLAST of EMLSAG00000000637 vs. nr
Match: gi|762089849|ref|XP_011427281.1| (PREDICTED: 5-methylcytosine rRNA methyltransferase NSUN4-like [Crassostrea gigas]) HSP 1 Score: 60.4622 bits (145), Expect = 5.926e-9 Identity = 25/39 (64.10%), Postives = 32/39 (82.05%), Query Frame = 0 Query: 15 KPGGYVVYSTCSLSPAQNDGVVHASLKELWEDAQLEFSV 53 KPGG VVYSTC+LSPAQNDGVVHA++ LW++ ++ V Sbjct: 396 KPGGTVVYSTCTLSPAQNDGVVHAAMDHLWKETDIDTVV 434
BLAST of EMLSAG00000000637 vs. nr
Match: gi|524891174|ref|XP_005102123.1| (PREDICTED: 5-methylcytosine rRNA methyltransferase NSUN4-like isoform X2 [Aplysia californica]) HSP 1 Score: 59.3066 bits (142), Expect = 1.583e-8 Identity = 25/45 (55.56%), Postives = 36/45 (80.00%), Query Frame = 0 Query: 9 SALLCVKPGGYVVYSTCSLSPAQNDGVVHASLKELWEDAQLEFSV 53 SA+ C GG +VYSTC+L+PAQNDGV+ A+++EL E +Q+E +V Sbjct: 373 SAIRCCIVGGEIVYSTCTLAPAQNDGVIQAAMEELLETSQIEVAV 417 The following BLAST results are available for this feature:
BLAST of EMLSAG00000000637 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO) Total hits: 9
BLAST of EMLSAG00000000637 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA) Total hits: 18
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BLAST of EMLSAG00000000637 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self) Total hits: 1
BLAST of EMLSAG00000000637 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt) Total hits: 0
BLAST of EMLSAG00000000637 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods) Total hits: 8
BLAST of EMLSAG00000000637 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017)) Total hits: 25
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BLAST of EMLSAG00000000637 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins) Total hits: 0
Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Cross References
External references for this gene
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at LSalAtl2s109:658751..659155- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>EMLSAG00000000637-683403 ID=EMLSAG00000000637-683403|Name=EMLSAG00000000637|organism=Lepeophtheirus salmonis|type=gene|length=405bp|location=Sequence derived from alignment at LSalAtl2s109:658751..659155- (Lepeophtheirus salmonis)back to top Add to Basket
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