EMLSAG00000000696, EMLSAG00000000696-683462 (gene) Lepeophtheirus salmonis

Overview
NameEMLSAG00000000696
Unique NameEMLSAG00000000696-683462
Typegene
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Homology
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BLAST of EMLSAG00000000696 vs. GO
Match: - (symbol:rtr1 "RNA polymerase II CTD phosphatase Rtr1 (predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0005737 "cytoplasm" evidence=ISO] [GO:0008420 "CTD phosphatase activity" evidence=ISO] [GO:0043175 "RNA polymerase core enzyme binding" evidence=ISM] [GO:0070940 "dephosphorylation of RNA polymerase II C-terminal domain" evidence=ISO] [GO:0005829 "cytosol" evidence=IDA] [GO:0005634 "nucleus" evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA] PomBase:SPAC23A1.16c Pfam:PF04181 GO:GO:0005829 GO:GO:0005634 EMBL:CU329670 GO:GO:0046872 GO:GO:0006351 GO:GO:0008420 GO:GO:0070940 InterPro:IPR007308 PROSITE:PS51479 eggNOG:NOG241465 PIR:T38235 RefSeq:NP_594445.1 MINT:MINT-4673535 STRING:4896.SPAC23A1.16c-1 EnsemblFungi:SPAC23A1.16c.1 GeneID:2542005 KEGG:spo:SPAC23A1.16c OrthoDB:EOG7TXKVF NextBio:20803085 PRO:PR:O42853 GO:GO:0043175 Uniprot:O42853)

HSP 1 Score: 64.6994 bits (156), Expect = 1.008e-10
Identity = 43/114 (37.72%), Postives = 62/114 (54.39%), Query Frame = 0 
Query:   61 QSEATALEIVEKLLDS-EIEFLWFEEEALPSLNQMFYKDVIDERSLLKLCGYPLCTHSLPKIIPRQ--KYHIVSSQRKVYDLTERKKFCSNSCYNASSYILEQLDNEPLWMRDD 171
            Q +  ALE +EKL+D   +E L   EEA   L +  Y  V+ ER L+ LCGYP+C +      P+Q  +Y +  S  KVY       +CS  C+  S   + +L +EPLW+R+D
Sbjct:   37 QYDFFALEWIEKLVDPVSLETL---EEARKYLRKSDYDQVVKERKLVNLCGYPVCPYE-----PKQQTRYKLEDSGMKVYGGLNY--YCSKDCFLKSCQYMVELSDEPLWIRED 140
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BLAST of EMLSAG00000000696 vs. GO
Match: - (symbol:AT5G26760 "AT5G26760" species:3702 "Arabidopsis thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634 "nucleus" evidence=ISM] [GO:0008150 "biological_process" evidence=ND] [GO:0007062 "sister chromatid cohesion" evidence=RCA] [GO:0031048 "chromatin silencing by small RNA" evidence=RCA] [GO:0045132 "meiotic chromosome segregation" evidence=RCA] Pfam:PF04181 GO:GO:0005634 EMBL:CP002688 GO:GO:0016311 GO:GO:0046872 GO:GO:0004721 EMBL:AF007270 EMBL:BT015786 PIR:T01757 RefSeq:NP_198028.2 RefSeq:NP_974839.1 UniGene:At.44801 ProteinModelPortal:F4K1B1 PRIDE:F4K1B1 EnsemblPlants:AT5G26760.2 GeneID:832734 KEGG:ath:AT5G26760 TAIR:AT5G26760 HOGENOM:HOG000241200 OMA:VNGREYP PhylomeDB:F4K1B1 PRO:PR:F4K1B1 InterPro:IPR007308 PROSITE:PS51479 Uniprot:F4K1B1)

HSP 1 Score: 63.929 bits (154), Expect = 1.336e-9
Identity = 32/70 (45.71%), Postives = 39/70 (55.71%), Query Frame = 0 
Query:   92 NQMF----------YKDVIDERSLLKLCGYPLCTHSLPKIIPRQ-KYHIVSSQRKVYDLTERKKFCSNSC 150
            NQ+F          Y+DV+ ER++ KLCGY LC   LP  + R+ KY I     KVYDL E  KFCS  C
Sbjct:   29 NQLFAARKLMSRSDYEDVVTERAIAKLCGYTLCQRFLPSDVSRRGKYRISLKDHKVYDLQETSKFCSAGC 98
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BLAST of EMLSAG00000000696 vs. GO
Match: - (symbol:RTR1 "CTD phosphatase" species:559292 "Saccharomyces cerevisiae S288c" [GO:0006351 "transcription, DNA-templated" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0006366 "transcription from RNA polymerase II promoter" evidence=IGI;IMP;IPI] [GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0070940 "dephosphorylation of RNA polymerase II C-terminal domain" evidence=IMP;IDA] [GO:0046872 "metal ion binding" evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA] [GO:0006355 "regulation of transcription, DNA-templated" evidence=IEA] [GO:0008420 "CTD phosphatase activity" evidence=IDA] [GO:0004721 "phosphoprotein phosphatase activity" evidence=IEA] SGD:S000000941 Pfam:PF04181 GO:GO:0005634 GO:GO:0005737 GO:GO:0046872 GO:GO:0006366 EMBL:BK006939 EMBL:U18917 GO:GO:0008420 GO:GO:0070940 InterPro:IPR007308 PROSITE:PS51479 OrthoDB:EOG7TXKVF PIR:S50642 RefSeq:NP_011066.3 ProteinModelPortal:P40084 SMR:P40084 BioGrid:36888 DIP:DIP-6690N IntAct:P40084 MINT:MINT-649086 STRING:4932.YER139C PaxDb:P40084 PeptideAtlas:P40084 EnsemblFungi:YER139C GeneID:856882 KEGG:sce:YER139C CYGD:YER139c eggNOG:NOG315830 GeneTree:ENSGT00530000069589 HOGENOM:HOG000000844 OMA:HFRCSQF BioCyc:YEAST:G3O-30300-MONOMER NextBio:983269 PRO:PR:P40084 Genevestigator:P40084 Uniprot:P40084)

HSP 1 Score: 50.8322 bits (120), Expect = 5.930e-6
Identity = 39/123 (31.71%), Postives = 60/123 (48.78%), Query Frame = 0 
Query:   57 LRKKQSEATALEIVEKLLDSEIEFLWFEEEALPSLNQMF----YKDVIDERSLLKLCGYPLCTHSLPKIIPRQKYHIVSSQRKVYDLTERK------KFCSNSCYNASSYILEQLDNEPLWMR 169
            L   ++E   LEI+  L DSE +    +E+ L  L +      Y+D++DER+L K CGYPLC  S  +I  R  + +  + +K   L E         +CS   +  S +   QL +E L+ R
Sbjct:   21 LSMHEAEVITLEIIGLLCDSECK----DEKTLKYLGRFLTPDMYQDLVDERNLNKRCGYPLCGKSPERI--RDPFSMNDTTKKF--LLENNPYAYLSHYCSKFHFRCSQFYQVQLSDEALFAR 135
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BLAST of EMLSAG00000000696 vs. GO
Match: - (symbol:AFUA_2G10310 "DUF408 domain protein" species:330879 "Aspergillus fumigatus Af293" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575 "cellular_component" evidence=ND] [GO:0008150 "biological_process" evidence=ND] Pfam:PF04181 EMBL:AAHF01000001 InterPro:IPR007308 PROSITE:PS51479 HOGENOM:HOG000163227 OrthoDB:EOG7J70S6 OMA:EKLEMWC RefSeq:XP_755364.1 EnsemblFungi:CADAFUAT00003961 GeneID:3513757 KEGG:afm:AFUA_2G10310 Uniprot:Q4X1D9)

HSP 1 Score: 46.595 bits (109), Expect = 2.271e-4
Identity = 27/87 (31.03%), Postives = 42/87 (48.28%), Query Frame = 0 
Query:   96 YKDVIDERSLLKLCGYPLCTHSLPKIIPRQKYHIV--------SSQRKVYDLTERKK---FCSNSCYNASSYILEQLDNEPLWMRDD 171
            Y ++I ER++  LCGY LC H   K   + K+ I           + +  ++  ++K   +CS+ C   + YI  QL  EP W R D
Sbjct:  119 YDNLILERNIEGLCGYGLCPHEHRKEDTKGKFRITWGAKGSGPGGRGREMNIVPKEKLEMWCSDECAERAMYIRVQLAEEPAWERRD 205
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BLAST of EMLSAG00000000696 vs. GO
Match: - (symbol:Afu2g10310 species:746128 "Aspergillus fumigatus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575 "cellular_component" evidence=ND] [GO:0008150 "biological_process" evidence=ND] Pfam:PF04181 EMBL:AAHF01000001 InterPro:IPR007308 PROSITE:PS51479 HOGENOM:HOG000163227 OrthoDB:EOG7J70S6 OMA:EKLEMWC RefSeq:XP_755364.1 EnsemblFungi:CADAFUAT00003961 GeneID:3513757 KEGG:afm:AFUA_2G10310 Uniprot:Q4X1D9)

HSP 1 Score: 46.595 bits (109), Expect = 2.271e-4
Identity = 27/87 (31.03%), Postives = 42/87 (48.28%), Query Frame = 0 
Query:   96 YKDVIDERSLLKLCGYPLCTHSLPKIIPRQKYHIV--------SSQRKVYDLTERKK---FCSNSCYNASSYILEQLDNEPLWMRDD 171
            Y ++I ER++  LCGY LC H   K   + K+ I           + +  ++  ++K   +CS+ C   + YI  QL  EP W R D
Sbjct:  119 YDNLILERNIEGLCGYGLCPHEHRKEDTKGKFRITWGAKGSGPGGRGREMNIVPKEKLEMWCSDECAERAMYIRVQLAEEPAWERRD 205
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BLAST of EMLSAG00000000696 vs. GO
Match: - (symbol:An16g04680 "Similarity to hypothetical protein SPAC23A1.16c - Schizosaccharomyces pombe" species:425011 "Aspergillus niger CBS 513.88" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575 "cellular_component" evidence=ND] [GO:0008150 "biological_process" evidence=ND] Pfam:PF04181 EMBL:AM270369 InterPro:IPR007308 PROSITE:PS51479 RefSeq:XP_001397777.1 EnsemblFungi:CADANGAT00012937 GeneID:4988860 KEGG:ang:ANI_1_664144 HOGENOM:HOG000163227 OrthoDB:EOG7J70S6 Uniprot:A2R7T5)

HSP 1 Score: 45.8246 bits (107), Expect = 4.010e-4
Identity = 32/101 (31.68%), Postives = 45/101 (44.55%), Query Frame = 0 
Query:   87 ALPSLNQMFYKDVIDERSLLKLCGYPLCTHSLPKIIPRQKYHIVSSQRKV--------YDLTERKK---FCSNSCYNASSYILEQLDNEPLWMR--DDKPG 174
            AL       Y ++I+ER++  LCGY LC     K   R  + I    +           D+  ++K   +CSN C   + YI  QL  EP+W R  DD  G
Sbjct:  117 ALVPFQPADYDNLIEERNIEGLCGYGLCPRERRKEDGRGSFRITWGAKGSGRGGRGREMDIVPKEKLEMWCSNECAERAMYIRVQLAEEPVWERRADDARG 217
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BLAST of EMLSAG00000000696 vs. GO
Match: - (symbol:An16g04680 species:5061 "Aspergillus niger" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575 "cellular_component" evidence=ND] [GO:0008150 "biological_process" evidence=ND] Pfam:PF04181 EMBL:AM270369 InterPro:IPR007308 PROSITE:PS51479 RefSeq:XP_001397777.1 EnsemblFungi:CADANGAT00012937 GeneID:4988860 KEGG:ang:ANI_1_664144 HOGENOM:HOG000163227 OrthoDB:EOG7J70S6 Uniprot:A2R7T5)

HSP 1 Score: 45.8246 bits (107), Expect = 4.010e-4
Identity = 32/101 (31.68%), Postives = 45/101 (44.55%), Query Frame = 0 
Query:   87 ALPSLNQMFYKDVIDERSLLKLCGYPLCTHSLPKIIPRQKYHIVSSQRKV--------YDLTERKK---FCSNSCYNASSYILEQLDNEPLWMR--DDKPG 174
            AL       Y ++I+ER++  LCGY LC     K   R  + I    +           D+  ++K   +CSN C   + YI  QL  EP+W R  DD  G
Sbjct:  117 ALVPFQPADYDNLIEERNIEGLCGYGLCPRERRKEDGRGSFRITWGAKGSGRGGRGREMDIVPKEKLEMWCSNECAERAMYIRVQLAEEPVWERRADDARG 217
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BLAST of EMLSAG00000000696 vs. GO
Match: - (symbol:ASPNIDRAFT_183811 "Uncharacterized protein" species:380704 "Aspergillus niger ATCC 1015" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575 "cellular_component" evidence=ND] [GO:0008150 "biological_process" evidence=ND] EMBL:ACJE01000013 OrthoDB:EOG7J70S6 InterPro:IPR007308 Pfam:PF04181 PROSITE:PS51479 Uniprot:G3Y638)

HSP 1 Score: 45.8246 bits (107), Expect = 4.118e-4
Identity = 32/101 (31.68%), Postives = 45/101 (44.55%), Query Frame = 0 
Query:   87 ALPSLNQMFYKDVIDERSLLKLCGYPLCTHSLPKIIPRQKYHIVSSQRKV--------YDLTERKK---FCSNSCYNASSYILEQLDNEPLWMR--DDKPG 174
            AL       Y ++I+ER++  LCGY LC     K   R  + I    +           D+  ++K   +CSN C   + YI  QL  EP+W R  DD  G
Sbjct:  117 ALVPFQPADYDNLIEERNIEGLCGYGLCPRERRKEDGRGSFRITWGAKGSGRGGRGREMDIVPKEKLEMWCSNECAERAMYIRVQLAEEPVWERRADDARG 217
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BLAST of EMLSAG00000000696 vs. C. finmarchicus
Match: gi|592899568|gb|GAXK01058807.1| (TSA: Calanus finmarchicus comp126072_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 120.168 bits (300), Expect = 1.104e-28
Identity = 60/130 (46.15%), Postives = 85/130 (65.38%), Query Frame = 0 
Query:   45 EEERREKIRTGLLRKKQSEATALEIVEKLLDSEIEFLWFEEEALPSLNQMFYKDVIDERSLLKLCGYPLCTHSLPKIIPRQKYHIVSSQRKVYDLTERKKFCSNSCYNASSYILEQLDNEPLWMRD-DKP 173
            EEE+REKIR  LL+KK  E  A+++VE++++  +   W    A   LN+ +Y D ++ERSL  +CGYPLC +   K     K+HI    +KVYDL ER+ FCSN C+ AS+Y  EQL+  PLW+R+ +KP
Sbjct: 1277 EEEKREKIRVALLKKKSYEDKAIKLVEEMIEPGVSASWLVSSA-NFLNKNYYSDGVEERSLTGICGYPLCENKREKKKNLGKFHISLKDKKVYDLEERRLFCSNWCFKASNYFREQLETSPLWLREVEKP 1663

HSP 2 Score: 67.781 bits (164), Expect = 2.132e-11
Identity = 40/116 (34.48%), Postives = 71/116 (61.21%), Query Frame = 0 
Query:  283 ISRTQVVWNQLDSVLPEILTLFGIQMPDISDDVRILIKGFYLTSSNIVFSMHEWTLLALVILEMIRDKNVKLRTVLKSKDAKKYLNMLLLNFDLEEKAISSMIINSIADINLLMHK 398
            + R ++V ++L   LPE+L LF   + ++  D+R+L+  F   + N+VF   EWTL+ L+IL+++  KN KL+TVL  +++ KYL ++LL+  LE   +   + +   D+  L+ K
Sbjct:   71 LHRRRIVLDKLFKTLPELLKLFSFSLEEMMGDLRLLVNSFQFAADNVVFRPEEWTLMGLLILKLLALKNSKLKTVLDDENSVKYLKLILLSHQLEVVVLEQTVRDLTGDVMKLVAK 418
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BLAST of EMLSAG00000000696 vs. C. finmarchicus
Match: gi|592794329|gb|GAXK01160239.1| (TSA: Calanus finmarchicus comp142829_c2_seq1 transcribed RNA sequence)

HSP 1 Score: 35.039 bits (79), Expect = 5.003e-1
Identity = 26/66 (39.39%), Postives = 31/66 (46.97%), Query Frame = 0 
Query:   85 EEALPSLNQMFYKD-VIDER---------SLLKLCGYPLC----THSLPKIIPRQKYHIVSSQRKV 136
            E AL S   + YK  +ID +         S    CGYPLC    T  LPKII   KYH +   R+V
Sbjct:  569 EVALCSCKIVIYKTFLIDSKHIDCGSFVGSCCSCCGYPLCC*STTAMLPKII--GKYHFIPIHRRV 760
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BLAST of EMLSAG00000000696 vs. C. finmarchicus
Match: gi|592899642|gb|GAXK01058733.1| (TSA: Calanus finmarchicus comp6104055_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 30.0314 bits (66), Expect = 6.064e+0
Identity = 19/51 (37.25%), Postives = 30/51 (58.82%), Query Frame = 0 
Query:  286 TQVVWNQLDSVLPEILTLFGIQMPDISDDVRILIKGFYLTSSNIVFSMHEW 336
            T V W QL+SVL E+ +L  + +P +S + +I     YL  S  ++S+H W
Sbjct:  172 TSVSWIQLESVLAEVNSLNSL-IPSVSLNWKI----SYLCLSMKLWSLHNW 309
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BLAST of EMLSAG00000000696 vs. L. salmonis peptides
Match: EMLSAP00000000696 (pep:novel supercontig:LSalAtl2s:LSalAtl2s110:434670:436202:-1 gene:EMLSAG00000000696 transcript:EMLSAT00000000696 description:"snap_masked-LSalAtl2s110-processed-gene-4.16")

HSP 1 Score: 822.002 bits (2122), Expect = 0.000e+0
Identity = 405/405 (100.00%), Postives = 405/405 (100.00%), Query Frame = 0 
Query:    1 MIGNSQIDCEMTEEEIFEIAREALKSKSSTSSSSSKKKPFKKLSEEERREKIRTGLLRKKQSEATALEIVEKLLDSEIEFLWFEEEALPSLNQMFYKDVIDERSLLKLCGYPLCTHSLPKIIPRQKYHIVSSQRKVYDLTERKKFCSNSCYNASSYILEQLDNEPLWMRDDKPGSERPMIKILGKDYGKYPGEEIPLSQAESPEIGDTKSFCDPKTHEEIEDELEKELETLPDVEELIHGVRQILLDISKETILFGRTDMWMDNEKEKEDNSELHLRMVPKVISRTQVVWNQLDSVLPEILTLFGIQMPDISDDVRILIKGFYLTSSNIVFSMHEWTLLALVILEMIRDKNVKLRTVLKSKDAKKYLNMLLLNFDLEEKAISSMIINSIADINLLMHKGAFKSNG 405
            MIGNSQIDCEMTEEEIFEIAREALKSKSSTSSSSSKKKPFKKLSEEERREKIRTGLLRKKQSEATALEIVEKLLDSEIEFLWFEEEALPSLNQMFYKDVIDERSLLKLCGYPLCTHSLPKIIPRQKYHIVSSQRKVYDLTERKKFCSNSCYNASSYILEQLDNEPLWMRDDKPGSERPMIKILGKDYGKYPGEEIPLSQAESPEIGDTKSFCDPKTHEEIEDELEKELETLPDVEELIHGVRQILLDISKETILFGRTDMWMDNEKEKEDNSELHLRMVPKVISRTQVVWNQLDSVLPEILTLFGIQMPDISDDVRILIKGFYLTSSNIVFSMHEWTLLALVILEMIRDKNVKLRTVLKSKDAKKYLNMLLLNFDLEEKAISSMIINSIADINLLMHKGAFKSNG
Sbjct:    1 MIGNSQIDCEMTEEEIFEIAREALKSKSSTSSSSSKKKPFKKLSEEERREKIRTGLLRKKQSEATALEIVEKLLDSEIEFLWFEEEALPSLNQMFYKDVIDERSLLKLCGYPLCTHSLPKIIPRQKYHIVSSQRKVYDLTERKKFCSNSCYNASSYILEQLDNEPLWMRDDKPGSERPMIKILGKDYGKYPGEEIPLSQAESPEIGDTKSFCDPKTHEEIEDELEKELETLPDVEELIHGVRQILLDISKETILFGRTDMWMDNEKEKEDNSELHLRMVPKVISRTQVVWNQLDSVLPEILTLFGIQMPDISDDVRILIKGFYLTSSNIVFSMHEWTLLALVILEMIRDKNVKLRTVLKSKDAKKYLNMLLLNFDLEEKAISSMIINSIADINLLMHKGAFKSNG 405
[Close]
BLAST of EMLSAG00000000696 vs. SwissProt
Match: gi|380877128|sp|A8DYY5.1|RPAP2_DROME (RecName: Full=Putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog; AltName: Full=RNA polymerase II-associated protein 2)

HSP 1 Score: 112.464 bits (280), Expect = 9.328e-29
Identity = 62/144 (43.06%), Postives = 91/144 (63.19%), Query Frame = 0 
Query:   46 EERREKIRTGLLRKKQSEATALEIVEKLLDSEI---EFLWFEEEALPSLNQMFYKDVIDERSLLKLCGYPLCTHSLPKIIPRQKYHIVSSQRKVYDLTERKKFCSNSCYNASSYILEQLDNEPLWMRDDKPGSERPMIKILGKD 186
            E+ R+++   +++K+ + A A EIV +LL+  I   EFL    E  P      Y D++DER + KLCGYPLC+  L + +P+QKY I +S+ KVYD+TERKKFCS  C+ AS YI  Q+   PLW+RD +    RP  ++L ++
Sbjct:    7 EQLRQQLIAAVVKKRAAIARAHEIVVRLLEPGIPEPEFLSLLCEIGPP----NYSDIVDEREINKLCGYPLCSTVL-ENVPKQKYSISASKNKVYDITERKKFCSGYCFKASEYIKSQVPTSPLWLRDRE---TRPSFQLLPRN 142
[Close]
BLAST of EMLSAG00000000696 vs. SwissProt
Match: gi|115503693|sp|Q8VC34.2|RPAP2_MOUSE (RecName: Full=Putative RNA polymerase II subunit B1 CTD phosphatase Rpap2; AltName: Full=RNA polymerase II-associated protein 2)

HSP 1 Score: 120.168 bits (300), Expect = 2.546e-28
Identity = 84/261 (32.18%), Postives = 136/261 (52.11%), Query Frame = 0 
Query:   31 SSSSSKKKPFKKLSEEERREKIRTGLLRKKQSEATALEIVEKLLDSEI--EFLWFEEEALPSLNQMFYKDVIDERSLLKLCGYPLCTHSLPKIIPRQKYHIVSSQRKVYDLTERKKFCSNSCYNASSYILEQLDNEPLWMRDDKPGSERPM-IKILGKDYGKYPGEEI-----PLSQAESPEIGDTKSFCDPK----THEEIEDELEKELETLPDVEELIHGVRQILLDI-----SKETILFGRTDMWMDNEKEKEDNSEL 274
            ++ + + +  K+    +R+ ++   + RK + E  A+ IVE+LL+  I  EFL   +E    +    Y DV+DERS++KLCGYPLC   L  +IP+QKY I +   KVYD+TERK FCSN CY AS +   Q+   P+W+R++    ERP   ++L K      GE +      ++ A+    G  ++ CDP       E   DE E+       V  L+ G R   +D      +K +I+  +    +D+++ ++  SE+
Sbjct:   23 ATGTKQTRALKRGDASKRQAELEAAIQRKVEFERKAVRIVEQLLEENITEEFL---KECGMFITPAHYSDVVDERSIIKLCGYPLCQKKL-GVIPKQKYRISTKTNKVYDITERKSFCSNFCYRASKFFETQIPKTPVWVREE----ERPPDFQLLKKGQSGSSGEVVQFFRDAVTAADVDGSGALEAQCDPASSSSWSERASDEEEQGF-----VSSLLPGNRPKAVDTRPQPHTKSSIMRKKAAQNVDSKEGEQTVSEV 270
[Close]
BLAST of EMLSAG00000000696 vs. SwissProt
Match: gi|81882974|sp|Q5I0E6.1|RPAP2_RAT (RecName: Full=RNA polymerase II subunit B1 CTD phosphatase Rpap2; AltName: Full=Putative RNA polymerase II-associated protein 2)

HSP 1 Score: 119.783 bits (299), Expect = 3.896e-28
Identity = 77/224 (34.38%), Postives = 118/224 (52.68%), Query Frame = 0 
Query:   31 SSSSSKKKPFKKLSEEERREKIRTGLLRKKQSEATALEIVEKLLDSEI--EFLWFEEEALPSLNQMFYKDVIDERSLLKLCGYPLCTHSLPKIIPRQKYHIVSSQRKVYDLTERKKFCSNSCYNASSYILEQLDNEPLWMRDDKPGSERPM-IKILGKDYGKYPGEEI-----PLSQAESPEIGDTKSFCDPKT----HEEIEDELEKELETLPDVEELIHGVR 242
            ++ + +    K+    +R+ ++   L RK +SE  A+ +VE+LL+  I  EFL   +E    +    Y DV+DER+++KLCGYPLC   L  +IP+QKY I +   KVYD+TERK FCSN CY AS +   Q+   P+W+R++    ERP   ++L K      GE +      ++ A+    G   + C+P +     E   DE   + E    V  L+ G R
Sbjct:   23 ATGTKQTSALKRRDASKRQAELEAALQRKVESERRAVRLVEQLLEENITEEFL---KECGMFITPAHYSDVVDERAIIKLCGYPLCQKKL-GVIPKQKYRISTKTNKVYDITERKSFCSNFCYKASKFFEAQIPKTPVWVREE----ERPPEFQLLKKGQSGCSGEVVQFFRDAVTAADVDAYGAFDAQCEPASSSTWSERASDERASDEEGPGFVSSLLPGNR 238
[Close]
BLAST of EMLSAG00000000696 vs. SwissProt
Match: gi|74750745|sp|Q8IXW5.1|RPAP2_HUMAN (RecName: Full=Putative RNA polymerase II subunit B1 CTD phosphatase RPAP2; AltName: Full=RNA polymerase II-associated protein 2)

HSP 1 Score: 119.398 bits (298), Expect = 5.334e-28
Identity = 68/181 (37.57%), Postives = 105/181 (58.01%), Query Frame = 0 
Query:   20 AREALKSKSSTSSSSSKK-KPFKKLSEEERREKIRTGLLRKKQSEATALEIVEKLLDSEI--EFLWFEEEALPSLNQMFYKDVIDERSLLKLCGYPLCTHSLPKIIPRQKYHIVSSQRKVYDLTERKKFCSNSCYNASSYILEQLDNEPLWMRDDKPGSERPMIKILGKDYGKYPGEEIPL 197
             R+A   + S  ++ +K+    K+    +R+ ++   + +K + E  AL IVE+LL+  I  EFL    E    +    Y DV+DERS++KLCGYPLC   L  I+P+QKY I +   KVYD+TERK FCSN CY AS +   Q+   P+W+R+++     P  ++L ++   + GEE+ L
Sbjct:   11 GRKAGAPRCSRKAAGTKQTSTLKQEDASKRKAELEAAVRKKIEFERKALHIVEQLLEENITEEFLM---ECGRFITPAHYSDVVDERSIVKLCGYPLCQKKL-GIVPKQKYKISTKTNKVYDITERKSFCSNFCYQASKFFEAQIPKTPVWVREEE---RHPDFQLLKEEQSGHSGEEVQL 184

HSP 2 Score: 55.8398 bits (133), Expect = 2.955e-7
Identity = 38/126 (30.16%), Postives = 62/126 (49.21%), Query Frame = 0 
Query:  228 LETLPDVEELIHGVRQILLDISKETILFGRTDMWMDNEKEKEDNSELHLRMVPKVISRTQ------VVWNQLDSVLPEILTLFGIQMPDISDDVRILIKGFYLTSSNIVFSMHEWTLLALVILEMI 347
            ++ LP  E L     ++ L I +    F R    +  E  K  +SE H    P + S +Q      +V  +L  VLP +L    I + DI   ++ L++ F LT+ NI+    EWTL+A+V+L ++
Sbjct:  443 IKPLPSYENLKKETEKLNLRIRE----FYRGRYVLGEETTKSQDSEEHDSTFPLIDSSSQNQIRKRIVLEKLSKVLPGLLVPLQITLGDIYTQLKNLVRTFRLTNRNIIHKPAEWTLIAMVLLSLL 564
[Close]
BLAST of EMLSAG00000000696 vs. SwissProt
Match: gi|75041829|sp|Q5RA37.1|RPAP2_PONAB (RecName: Full=Putative RNA polymerase II subunit B1 CTD phosphatase RPAP2; AltName: Full=RNA polymerase II-associated protein 2)

HSP 1 Score: 118.627 bits (296), Expect = 8.476e-28
Identity = 68/181 (37.57%), Postives = 104/181 (57.46%), Query Frame = 0 
Query:   20 AREALKSKSSTSSSSSKK-KPFKKLSEEERREKIRTGLLRKKQSEATALEIVEKLLDSEI--EFLWFEEEALPSLNQMFYKDVIDERSLLKLCGYPLCTHSLPKIIPRQKYHIVSSQRKVYDLTERKKFCSNSCYNASSYILEQLDNEPLWMRDDKPGSERPMIKILGKDYGKYPGEEIPL 197
             R+A   + S  ++ +K+    K+    +R+ ++   + +K + E  AL IVE+LL+  I  EFL    E    +    Y DV+DERS++KLCGYPLC   L  I+P+QKY I +   KVYD+TERK FCSN CY AS +   Q+   P+W+R+++     P  ++L +    + GEE+ L
Sbjct:   11 GRKAGAPRRSRKAAGTKQTSTLKQEDASKRKAELEAAVRKKIEFERKALHIVEQLLEENITEEFLM---ECGKFITPAHYSDVVDERSIVKLCGYPLCQKKL-GIVPKQKYKISTKTNKVYDITERKSFCSNFCYQASKFFEAQIPKTPVWVREEE---RHPDFQLLKEQQSGHSGEEVQL 184

HSP 2 Score: 58.5362 bits (140), Expect = 4.750e-8
Identity = 39/126 (30.95%), Postives = 63/126 (50.00%), Query Frame = 0 
Query:  228 LETLPDVEELIHGVRQILLDISKETILFGRTDMWMDNEKEKEDNSELHLRMVPKVISRTQ------VVWNQLDSVLPEILTLFGIQMPDISDDVRILIKGFYLTSSNIVFSMHEWTLLALVILEMI 347
            ++ LP  E L     ++ L I +    F R    +D E  K  +SE H    P + S +Q      +V  +L  VLP +L    I + DI   ++ L++ F LT+ NI+    EWTL+A+V+L ++
Sbjct:  443 IKPLPSYENLKKETEKLNLRIRE----FYRGRYVLDEETTKSQDSEEHDSTFPLIDSSSQNQIRKRIVLEKLSKVLPGLLVPLQITLGDIYTQLKNLVRTFRLTNRNIIHKPAEWTLIAMVLLSLL 564
[Close]
BLAST of EMLSAG00000000696 vs. SwissProt
Match: gi|380877126|sp|F6RRD7.1|RPAP2_BOVIN (RecName: Full=Putative RNA polymerase II subunit B1 CTD phosphatase RPAP2; AltName: Full=RNA polymerase II-associated protein 2)

HSP 1 Score: 116.316 bits (290), Expect = 5.206e-27
Identity = 64/153 (41.83%), Postives = 91/153 (59.48%), Query Frame = 0 
Query:   47 ERREKIRTGLLRKKQSEATALEIVEKLLDSEI--EFLWFEEEALPSLNQMFYKDVIDERSLLKLCGYPLCTHSLPKIIPRQKYHIVSSQRKVYDLTERKKFCSNSCYNASSYILEQLDNEPLWMRDDKPGSERPMIKILGKDYGKYPGEEIPL 197
            +R+ ++   + +K + E  AL IVE+LL+  I  EFL    E    +    Y DV+DERS++KLCGYPLC + L  I+P+QKY I +   KVYD+TERK FCSN CY AS +   Q+   P+W+R+++     P  ++L        GEEI L
Sbjct:   39 QRKAELEAAVRKKIEFERKALHIVEQLLEENISEEFL---RECGKFITPAHYSDVVDERSIIKLCGYPLCQNKL-GIVPKQKYKISTKTNKVYDITERKCFCSNFCYKASKFFEAQIPKSPVWIREEE---RHPDFQLLQDGQSGPSGEEIQL 184

HSP 2 Score: 55.0694 bits (131), Expect = 5.893e-7
Identity = 51/186 (27.42%), Postives = 81/186 (43.55%), Query Frame = 0 
Query:  182 ILGKDYGKY--PGEEIPLSQAESPEIGDTKSFCDPKTHEEIEDEL------------EKELETLPDVEELIHGVRQILLDISKETILFGRTDMWMDNEKEKEDNSELHLRMVPKVISRTQ------VVWNQLDSVLPEILTLFGIQMPDISDDVRILIKGFYLTSSNIVFSMHEWTLLALVILEMI 347
            + G++Y          PL + E  +  D  S  DP +H     EL            +  ++ LP  E L      + L I +    F R    ++ E  K  +SE H    P + S +Q      +V  +L+ VLP +L    I + DI   ++ L+  F LT+ NI+    EWTL+ALV+L ++
Sbjct:  384 LYGQNYASVCLKSSSTPLVKEEELDEDDMNS--DPDSHSPALQELNSLDESLPFRASDTAIKPLPSYENLKKETETLNLRIRE----FYRGRYVLNEETTKSQDSEEHDPTFPLIDSSSQNQIRKRIVLEKLNKVLPGLLGPLQITLGDIYTQLKNLVHTFRLTNRNIIHKPAEWTLIALVLLSIL 563
[Close]
BLAST of EMLSAG00000000696 vs. SwissProt
Match: gi|380877127|sp|B0UYH6.1|RPAP2_DANRE (RecName: Full=Putative RNA polymerase II subunit B1 CTD phosphatase rpap2; AltName: Full=RNA polymerase II-associated protein 2)

HSP 1 Score: 108.997 bits (271), Expect = 1.358e-24
Identity = 62/155 (40.00%), Postives = 91/155 (58.71%), Query Frame = 0 
Query:   45 EEERREKIRTGLLRKKQSEATALEIVEKLLDSEI--EFLWFEEEALPSLNQMFYKDVIDERSLLKLCGYPLCTHSLPKIIPRQKYHIVSSQRKVYDLTERKKFCSNSCYNASSYILEQLDNEPLWMRDDKPGSERPMIKILGKDYGKYPGEEIPL 197
            E +RRE ++  L +K + E  A ++VE+LL+  +  EFL    +    +    YKD ++ERS+ KLCGYP+C + L  + P Q+Y I +   KVYD+TERK FCSN CY AS     Q+   PLW+R ++     P IK++ +  G   G+EI L
Sbjct:   31 EAKRREAVKEQLRQKLELERKARQVVERLLEDSVTEEFLM---DCAWHITPANYKDTVEERSIAKLCGYPMCPNKLTNV-PTQQYKISTKTNKVYDITERKCFCSNFCYKASKSFELQISKIPLWLRKEE---SPPEIKLMKQGDGGSSGQEIKL 178

HSP 2 Score: 56.225 bits (134), Expect = 2.706e-7
Identity = 59/227 (25.99%), Postives = 103/227 (45.37%), Query Frame = 0 
Query:  179 MIKILGKDY---------GKYPGEEIPLSQAESPEIGDTKSFCDP-KTHEEIED--ELEKELETLP-DVEELIHGVRQILLDISKETILFGRTDMWMDNEKEKEDNSELHLRMVPKVISRTQ------VVWNQLDSVLPEILTLFGIQMPDISDDVRILIKGFYLTSSNIVFSMHEWTLLALVILEMIRDKNVKLRTVLKSKDAKKYLNMLLLNFDLEEKAISSMII 386
            MI + G DY         G +  E++     +  E+G   +   P +T   + D   L KE E L   V E   GV   +L    ET     T+   D+ K+           +P V S  Q      +V  +L   L +I+    + M D+ +DV  L++ F  T++NI+    EWTL+A+V+L ++ + +  LR  L S  + +Y++  +    LE+K + ++++
Sbjct:  376 MIFLYGPDYASGMQLSTAGAWEEEQLDEDDLDEAEVGVRSAEGGPSRTSAPVPDVETLRKETEMLELRVREFYKGV--CVLPEEVETAAVKETEHTQDSGKDPP---------LPLVDSHAQHQIQKRIVVEKLSHSLRDIVGPLRLTMSDVINDVNNLVRTFRFTNTNIIHKSPEWTLIAVVLLSVLTEVSPLLRESLASVSSLEYISCFMKELKLEDKDLHNLVL 591
[Close]
BLAST of EMLSAG00000000696 vs. SwissProt
Match: gi|267548|sp|P30641.1|RPAP2_CAEEL (RecName: Full=Putative RNA polymerase II subunit B1 CTD phosphatase R08D7.2; AltName: Full=RNA polymerase II-associated protein 2)

HSP 1 Score: 76.2554 bits (186), Expect = 7.043e-14
Identity = 33/85 (38.82%), Postives = 53/85 (62.35%), Query Frame = 0 
Query:   85 EEALPSLNQMFYKDVIDERSLLKLCGYPLCTHSLPKIIPRQKYHIVSSQRKVYDL-TERKKFCSNSCYNASSYILEQLDNEPLWM 168
            +E LP L+ + + +V++ER + K CG+P C  + PKI   Q + I   + K+++   +R KFCS  CY  SS++ +QLD  PLW+
Sbjct:   35 QEHLPHLHCLGWDEVVEERYVNKQCGFPSCQKAPPKITRNQMFEIDRKEGKIFEFRKQRAKFCSEMCYQKSSFVRKQLDEHPLWI 119
[Close]
BLAST of EMLSAG00000000696 vs. SwissProt
Match: gi|74582120|sp|O42853.1|RPAP2_SCHPO (RecName: Full=Putative RNA polymerase II subunit B1 CTD phosphatase rtr1; AltName: Full=RNA polymerase II-associated protein 2 homolog rtr1)

HSP 1 Score: 64.6994 bits (156), Expect = 6.506e-11
Identity = 43/114 (37.72%), Postives = 62/114 (54.39%), Query Frame = 0 
Query:   61 QSEATALEIVEKLLDS-EIEFLWFEEEALPSLNQMFYKDVIDERSLLKLCGYPLCTHSLPKIIPRQ--KYHIVSSQRKVYDLTERKKFCSNSCYNASSYILEQLDNEPLWMRDD 171
            Q +  ALE +EKL+D   +E L   EEA   L +  Y  V+ ER L+ LCGYP+C +      P+Q  +Y +  S  KVY       +CS  C+  S   + +L +EPLW+R+D
Sbjct:   37 QYDFFALEWIEKLVDPVSLETL---EEARKYLRKSDYDQVVKERKLVNLCGYPVCPYE-----PKQQTRYKLEDSGMKVYGGLNY--YCSKDCFLKSCQYMVELSDEPLWIRED 140
[Close]
BLAST of EMLSAG00000000696 vs. SwissProt
Match: gi|380877125|sp|F4K1B1.1|RPAP2_ARATH (RecName: Full=Putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 homolog; AltName: Full=RNA polymerase II-associated protein 2 homolog)

HSP 1 Score: 63.929 bits (154), Expect = 1.020e-9
Identity = 32/70 (45.71%), Postives = 39/70 (55.71%), Query Frame = 0 
Query:   92 NQMF----------YKDVIDERSLLKLCGYPLCTHSLPKIIPRQ-KYHIVSSQRKVYDLTERKKFCSNSC 150
            NQ+F          Y+DV+ ER++ KLCGY LC   LP  + R+ KY I     KVYDL E  KFCS  C
Sbjct:   29 NQLFAARKLMSRSDYEDVVTERAIAKLCGYTLCQRFLPSDVSRRGKYRISLKDHKVYDLQETSKFCSAGC 98
[Close]
BLAST of EMLSAG00000000696 vs. Select Arthropod Genomes
Match: XP_016768443.1 (PREDICTED: putative RNA polymerase II subunit B1 CTD phosphatase Rpap2 [Apis mellifera])

HSP 1 Score: 122.479 bits (306), Expect = 9.928e-30
Identity = 62/144 (43.06%), Postives = 95/144 (65.97%), Query Frame = 0 
Query:   52 IRTGLLRKKQSEATALEIVEKLLDSEIEFLWFEEEALPSLNQMFYKDVIDERSLLKLCGYPLCTHSLPKIIPRQKYHIVSSQRKVYDLTERKKFCSNSCYNASSYILEQLDNEPLWMRDDKPGSERPMIKILGKDYGKYPGEEI 195
            ++  +++KK+ +A AL IVE+LL+S+I+  W     L  +N+   +DVI+ER+++KLCGY LC ++L K I  Q+YHI + + KVYD+T RK FCS+ CY AS+Y+LEQ+   PLW+RD +   E  ++    K      G+EI
Sbjct:   24 MQLAIIKKKKCDAKALTIVEQLLESKIDSQWLLSN-LKYINKNHMEDVIEERAIIKLCGYVLCNNAL-KTITDQRYHISTKKNKVYDITRRKNFCSSHCYGASNYLLEQMLTSPLWLRDKEEIPEFQILLTKDKFIKNVVGDEI 165

HSP 2 Score: 57.7658 bits (138), Expect = 3.092e-8
Identity = 29/114 (25.44%), Postives = 67/114 (58.77%), Query Frame = 0 
Query:  285 RTQVVWNQLDSVLPEILTLFG-------IQMPDISDDVRILIKGFYLTSSNIVFSMHEWTLLALVILEMIRDKNVKLRTVLKSKDAKKYLNMLLLNFDLEEKAISSMIINSIAD 391
            R ++  ++L+ +LP++            +   + S  +++LI  F L++SN++F   EWTL+ L+I++M+   + +L+ +L +K A  Y++M+L+++ L+   +  +I+  I +
Sbjct:  402 RRRIFLDKLNKILPDLFNALTKNKLSQYVYNSEKSTLIKVLINTFSLSASNVIFKTAEWTLVGLIIIKMLSMIDPELKCLLSTKQALMYISMILMSYKLDSNYLERLIMELINN 515
[Close]
BLAST of EMLSAG00000000696 vs. Select Arthropod Genomes
Match: ABV53661.1 (uncharacterized protein Dmel_CG34183 [Drosophila melanogaster])

HSP 1 Score: 112.464 bits (280), Expect = 4.521e-29
Identity = 62/144 (43.06%), Postives = 91/144 (63.19%), Query Frame = 0 
Query:   46 EERREKIRTGLLRKKQSEATALEIVEKLLDSEI---EFLWFEEEALPSLNQMFYKDVIDERSLLKLCGYPLCTHSLPKIIPRQKYHIVSSQRKVYDLTERKKFCSNSCYNASSYILEQLDNEPLWMRDDKPGSERPMIKILGKD 186
            E+ R+++   +++K+ + A A EIV +LL+  I   EFL    E  P      Y D++DER + KLCGYPLC+  L + +P+QKY I +S+ KVYD+TERKKFCS  C+ AS YI  Q+   PLW+RD +    RP  ++L ++
Sbjct:    7 EQLRQQLIAAVVKKRAAIARAHEIVVRLLEPGIPEPEFLSLLCEIGPP----NYSDIVDEREINKLCGYPLCSTVL-ENVPKQKYSISASKNKVYDITERKKFCSGYCFKASEYIKSQVPTSPLWLRDRE---TRPSFQLLPRN 142
[Close]
BLAST of EMLSAG00000000696 vs. Select Arthropod Genomes
Match: EDO63560.1 (AGAP008431-PA, partial [Anopheles gambiae str. PEST])

HSP 1 Score: 108.997 bits (271), Expect = 1.030e-26
Identity = 54/125 (43.20%), Postives = 82/125 (65.60%), Query Frame = 0 
Query:   49 REKIRTGLLRKKQSEATALEIVEKLLD---SEIEFLWFEEEALPSLNQMFYKDVIDERSLLKLCGYPLCTHSLPKIIPRQKYHIVSSQRKVYDLTERKKFCSNSCYNASSYILEQLDNEPLWMRD 170
            +E+++  L +KK+    A  +VE L++   +E E L      L  +NQ   +D++ ER+++K+CGYPLC + L K IP+Q+Y I  +Q KV+D+TERK FCS  CY AS+YI +Q+   PLW+RD
Sbjct:   36 KEQLQKALRKKKECNDKAQRVVETLIEPGRTEDELLTL----LKDINQCHMEDIVQERAIVKICGYPLCDNEL-KNIPKQQYVISVTQNKVFDITERKNFCSGDCYKASNYIKQQMLTSPLWLRD 155
[Close]
BLAST of EMLSAG00000000696 vs. Select Arthropod Genomes
Match: gb|EFA00145.2| (hypothetical protein TcasGA2_TC002966 [Tribolium castaneum])

HSP 1 Score: 110.923 bits (276), Expect = 2.633e-25
Identity = 62/171 (36.26%), Postives = 99/171 (57.89%), Query Frame = 0 
Query:   59 KKQSEATALEIVEKLLDSEI--EFLWFEEEALPSLNQMFYKDVIDERSLLKLCGYPLCTHSLPKIIPRQKYHIVSSQRKVYDLTERKKFCSNSCYNASSYILEQLDNEPLWMRDDKPGSERPMIKILGKDYGKYPGEEIP---LSQAESPEIGDTKSFCDPKTHEEIEDEL 224
            KK+ +A AL+I++  ++ ++  + L+   + LP +NQ  Y+D+++ER++ KLCGYPLC+  +P + P+++++I +   KVYD+T+RK +CSN CY AS +I  Q+D  PLW+R      E+    +L K     PGE I    +  A  P      SF      E  E EL
Sbjct:   33 KKECDAKALQILQFAIEGKMRSDALF---KCLPYINQSHYQDIVEERAISKLCGYPLCSKKIPDM-PKKQFYISTKNNKVYDITDRKNYCSNFCYRASLHIKGQIDTSPLWLR---KYQEKAHYTLLNKSEKGLPGEMIDQGVIKPAVEPYFTSVSSFTQMSLDEAEELEL 196
[Close]
BLAST of EMLSAG00000000696 vs. Select Arthropod Genomes
Match: gb|KFM57894.1| (putative RNA polymerase II subunit B1 CTD phosphatase rpap2, partial [Stegodyphus mimosarum])

HSP 1 Score: 105.531 bits (262), Expect = 7.902e-24
Identity = 64/144 (44.44%), Postives = 87/144 (60.42%), Query Frame = 0 
Query:   53 RTGLLRKKQSEATALEIVEKLLDSEIEFLWFEEEALPSLNQMFYKDVIDERSLLKLCGYPLCTHSLPKIIPRQKYHIVSSQRKVYDLTERKKFCSNSCYNASSYILEQLDNEPLWMRDDKPGSERPMIKILGK-DYGKYPGEEI 195
            R  +L+ K+S    L+IVE LL+ ++   WF +     L Q  Y DVI ERS+  +CGYPLC+  + ++ P+QKYHI     KVYDLTERK FCSN+CY AS+++  QL   PL+MR +    E  +I +L   D     GEEI
Sbjct:   28 REKVLKIKRS---ILKIVEALLEEDVSKEWFLDNCT-KLCQNDYDDVIQERSIEHMCGYPLCSKIITQV-PKQKYHISRLSNKVYDLTERKCFCSNACYKASNFVKAQLSPVPLYMRKE----ETIIINLLSDCDNKGSAGEEI 162
[Close]
BLAST of EMLSAG00000000696 vs. Select Arthropod Genomes
Match: EFX69879.1 (hypothetical protein DAPPUDRAFT_300664 [Daphnia pulex])

HSP 1 Score: 101.679 bits (252), Expect = 1.097e-22
Identity = 49/124 (39.52%), Postives = 82/124 (66.13%), Query Frame = 0 
Query:   47 ERREKIRTGLLRKKQSEATALEIVEKLL-DSEIEFLWFEEEALPSLNQMFYKDVIDERSLLKLCGYPLCTHSLPKIIPRQKYHIVSSQRKVYDLTERKKFCSNSCYNASSYILEQLDNEPLWMR 169
            E+R  +     +KK+SE  AL +VE ++ +S ++  W  ++A   +N  +Y+D I+ER++ K CG+P+C H+L +   +QKY I    +KV+D+T+RK FCS+ C++AS++  +QL   PLWMR
Sbjct:   19 EKRAAVEAAFRKKKESERRALGLVEHMVENSAVDTQWLADKA-KFINPQYYQDTIEERAIAKQCGFPVC-HNLIEKELKQKYRIDLKTKKVFDVTQRKNFCSDVCFSASNHFKDQLLTSPLWMR 140
[Close]
BLAST of EMLSAG00000000696 vs. Select Arthropod Genomes
Match: EEB17600.1 (conserved hypothetical protein [Pediculus humanus corporis])

HSP 1 Score: 97.0561 bits (240), Expect = 7.403e-21
Identity = 55/139 (39.57%), Postives = 88/139 (63.31%), Query Frame = 0 
Query:   32 SSSSKKKPFKKLSEEERREKIRTGLLRKKQSEATALEIVEKLLDSEIEFLWFEEEALPSLNQMFYKDVIDERSLLKLCGYPLCTHSLPKIIPRQKYHIVSSQRKVYDLTERKKFCSNSCYNASSYILEQLDNEPLWMRD 170
            +S SKKK   K  ++  +E+++  L +KK+  A A +IVE L + +I+  WF +  +   NQ  ++DV  ERS+ K+CGYPLC + L  I+ +Q +HI +   +V+D+T+RK FCS+ CY ++ ++  QL   PLW RD
Sbjct:    2 ASKSKKKNIPKSIKDMSKEELQETLEKKKKQNAKAQKIVEMLCELKIDEQWFLDNHI---NQSHFEDVTIERSISKICGYPLCDNELKNILTQQ-FHISTKYNRVFDITQRKNFCSSLCYKSAMFVKNQLFTSPLWFRD 136
[Close]
BLAST of EMLSAG00000000696 vs. nr
Match: gi|63102016|gb|AAH95735.1| (RNA polymerase II associated protein 2 [Danio rerio])

HSP 1 Score: 135.191 bits (339), Expect = 8.713e-33
Identity = 100/346 (28.90%), Postives = 167/346 (48.27%), Query Frame = 0 
Query:   45 EEERREKIRTGLLRKKQSEATALEIVEKLLDSEI--EFLWFEEEALPSLNQMFYKDVIDERSLLKLCGYPLCTHSLPKIIPRQKYHIVSSQRKVYDLTERKKFCSNSCYNASSYILEQLDNEPLWMRDDKPGSERPMIKILGKDYGKYPGEEIPLSQAESPEIGDTKSFCDPKTHEEIEDELEKELE--TLPDVEELIHGVRQILLDISKETILFGRTDMWMDNEKEKEDNSELHLRMVPKVISRTQVVWNQLDSVLPEILTLFGIQMPDISDDVRILIKGFYLTSSNIVFSMHEWTLLALVILEMIRDKNVKLRTVLKSKDAKKYLNMLLLNFDLEEKAISSMII 386
            E +RRE ++  L +K + E  A ++VE+LL+  +  EFL    +    +    YKD ++ERS+ KLCGYP+C + L  + P Q+Y I +   KVYD+TERK FCSN CY AS     Q+   PLW+R ++     P IK++ +  G   G+EI L                P T  +I++ +E   +   LP V+   H   QI                                        + ++V  +L   L +I+    + M D+ +DV  L++ F  T++NI+    EWTL+A+V+L ++ + +  LR  L S  + +Y++  +    LE+K + ++++
Sbjct:   31 EAKRREAVKEQLRQKLELERKARQVVERLLEDSVTEEFLM---DCAWHITPANYKDTVEERSIAKLCGYPMCPNKLTNV-PTQQYEISTKTNKVYDITERKCFCSNFCYKASKSFELQISKIPLWLRKEE---SPPEIKLMKQGDGGSSGQEIKLIDK-------------PITEADIDNPIEDSGKDPPLPLVDS--HAQHQI----------------------------------------QKRIVVEKLSHSLRDIVGPLRLTMSDVINDVNNLVRTFRFTNTNIIHKSPEWTLIAVVLLSVLTEVSPLLRESLASVSSLEYISCFMKELKLEDKDLHNLVL 314
[Close]
BLAST of EMLSAG00000000696 vs. nr
Match: gi|485050345|ref|NP_001019603.2| (putative RNA polymerase II subunit B1 CTD phosphatase rpap2 isoform 2 [Danio rerio])

HSP 1 Score: 135.191 bits (339), Expect = 8.894e-33
Identity = 100/346 (28.90%), Postives = 167/346 (48.27%), Query Frame = 0 
Query:   45 EEERREKIRTGLLRKKQSEATALEIVEKLLDSEI--EFLWFEEEALPSLNQMFYKDVIDERSLLKLCGYPLCTHSLPKIIPRQKYHIVSSQRKVYDLTERKKFCSNSCYNASSYILEQLDNEPLWMRDDKPGSERPMIKILGKDYGKYPGEEIPLSQAESPEIGDTKSFCDPKTHEEIEDELEKELE--TLPDVEELIHGVRQILLDISKETILFGRTDMWMDNEKEKEDNSELHLRMVPKVISRTQVVWNQLDSVLPEILTLFGIQMPDISDDVRILIKGFYLTSSNIVFSMHEWTLLALVILEMIRDKNVKLRTVLKSKDAKKYLNMLLLNFDLEEKAISSMII 386
            E +RRE ++  L +K + E  A ++VE+LL+  +  EFL    +    +    YKD ++ERS+ KLCGYP+C + L  + P Q+Y I +   KVYD+TERK FCSN CY AS     Q+   PLW+R ++     P IK++ +  G   G+EI L                P T  +I++ +E   +   LP V+   H   QI                                        + ++V  +L   L +I+    + M D+ +DV  L++ F  T++NI+    EWTL+A+V+L ++ + +  LR  L S  + +Y++  +    LE+K + ++++
Sbjct:   31 EAKRREAVKEQLRQKLELERKARQVVERLLEDSVTEEFLM---DCAWHITPANYKDTVEERSIAKLCGYPMCPNKLTNV-PTQQYKISTKTNKVYDITERKCFCSNFCYKASKSFELQISKIPLWLRKEE---SPPEIKLMKQGDGGSSGQEIKLIDK-------------PITEADIDNPIEDSGKDPPLPLVDS--HAQHQI----------------------------------------QKRIVVEKLSHSLRDIVGPLRLTMSDVINDVNNLVRTFRFTNTNIIHKSPEWTLIAVVLLSVLTEVSPLLRESLASVSSLEYISCFMKELKLEDKDLHNLVL 314
[Close]
BLAST of EMLSAG00000000696 vs. nr
Match: gi|998508367|ref|XP_015514552.1| (PREDICTED: putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 [Neodiprion lecontei])

HSP 1 Score: 130.568 bits (327), Expect = 1.105e-29
Identity = 80/232 (34.48%), Postives = 128/232 (55.17%), Query Frame = 0 
Query:   31 SSSSSKKKPFKKLSEEERREKIRTGLLRKKQSEATALEIVEKLLDSEIEFLWFEEEALPSLNQMFYKDVIDERSLLKLCGYPLCTHSLPKIIPRQKYHIVSSQRKVYDLTERKKFCSNSCYNASSYILEQLDNEPLWMRDDKPGSERPMIKIL---GKDYGKYPGEEIPLSQ----AESPEIGDTKS--FCDPKTHEEIEDELEKELETLPDVEELIHGVRQILLDISKETI 253
            +S+S K+    +   +  +E+++  L +K+Q +A AL IVE+L+D  ++  W  E  L  +N+    DV++ER++L+ CGY LC + L K+   QKYHI +   KVYD++ RK FCSN+CY A++YILEQ+   PLW+R+ K   E+P  ++L   G      PG+E+ L +     +S EI  T      D     E  + +E  +  +PD      G   +  D+S + I
Sbjct:    2 TSTSRKRNDGSRTKMKMSKEQLQLALTKKRQCDARALAIVERLIDDAVDQTWLLEN-LEHINRCHMDDVVEERAILRRCGYALCDNPL-KLNINQKYHISTRNNKVYDVSRRKNFCSNNCYGATNYILEQMLTSPLWLRNPK---EKPCFQLLPPTGLIKKSTPGDEVYLGRENVSVDSCEIQKTDKAIVSDKLPSTESNNAIENTINNVPDNSINKSGTEIVEGDVSAKEI 228

HSP 2 Score: 66.6254 bits (161), Expect = 2.753e-8
Identity = 50/196 (25.51%), Postives = 100/196 (51.02%), Query Frame = 0 
Query:  221 EDELEKELETLPDVEELIHGVRQILLDI----SKETILFGRTDMWMDNEKEKEDNSELHLRMV----PKVISRTQVVWNQLDSVLPEIL-TLFG--------IQMPDISDDVRILIKGFYLTSSNIVFSMHEWTLLALVILEMIRDKNVKLRTVLKSKDAKKYLNMLLLNFDLEEKAISSMIINSIADINLLMHKG 399
            E++ +++L+ LPD   L     QI + +      +T++        +    +ED+S   + M+    P+ + R +++  +LD VLPE++ TL G        I        V+ L+  F L++SN++    EW LL L+ + ++     +LR +L +  A KY+ M+L++++LE   + +++  +  DI L+ +K 
Sbjct:  355 EEDSKRDLKPLPDYSVLKEASAQIEVKVRAFYQGQTLIDATKPPSGNAVANEEDDSSTFMPMLGEREPRTLRR-RIILEKLDKVLPEMVRTLAGGEFAVDGCISTNGCGKTVKALVNTFSLSASNVIPKPAEWNLLGLIFIRLLSTSEPRLRFLLGTDRASKYITMILMSYNLEPSDLDTLVAVA-TDIQLVSNKN 548
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BLAST of EMLSAG00000000696 vs. nr
Match: gi|914554034|gb|KOB64773.1| (putative RNA polymerase II associated protein 2 [Operophtera brumata])

HSP 1 Score: 129.413 bits (324), Expect = 3.083e-29
Identity = 75/178 (42.13%), Postives = 105/178 (58.99%), Query Frame = 0 
Query:   31 SSSSSKKKPFKKLSEEERREKIRTGLLRKKQSEATALEIVEKLLDSEI--EFLWFEEEALPSLNQMFYKDVIDERSLLKLCGYPLCTHSLP-KIIPRQKYHIVSSQRKVYDLTERKKFCSNSCYNASSYILEQLDNEPLWMRDDKPGSERPMIKILGKDYGKYPGEEIPLSQAESPEI 205
            +++  KKKP K   EE  +++IR  LLRKK+  A A +IVE LL+  I  E L    + LP +NQ  + DV +ER++L LCGYP+C HS+  K IP+QKY I     KVYD+T RK FCSN CY ++ Y+ +Q+   PLW R+ +     P   +L  D     G+E+ L   E  +I
Sbjct:    3 TNNKHKKKPMK--FEEMSKDQIRQALLRKKECNAKAQKIVESLLEEGISEEHLL---QCLPDINQAHFDDVFEERAILHLCGYPICQHSISYKDIPKQKYRISLKTNKVYDITARKNFCSNRCYKSAMYVKQQMLTSPLWFREHEVI---PSFHLLPGDTAGSMGQEVDLGVIERVKI 172

HSP 2 Score: 65.855 bits (159), Expect = 4.832e-8
Identity = 47/182 (25.82%), Postives = 102/182 (56.04%), Query Frame = 0 
Query:  222 DELEKELETLPDVEELIHGVRQILLDISKETILFGRTDM----WMDNEKEKEDNSELHLRMV---PKVISRTQVVWNQLDSVLPEILTLFGIQMPDISDDVRILIKGFYLTSSNIVFSMHEWTLLALVILEMIRDKNVKLRTVLKSKDAKKYLNMLLLNFDLEEKAISSMIINSIADINLLM 396
            ++ +K+++ LPD   L    ++I L +     + G T++      + EK+ ED +   L +V    +   R ++V+  L+ VLP++L   G+       DVR+L+  F L ++NI++   +WTL+AL+ ++++  ++ +L  +L+   A +++ +LLL++ L+   +  + I+ + DI+ L+
Sbjct:  388 NKFQKQMQPLPDYSILQEESKRIQLKV--RAYMAGETNIPKPEECEKEKQIEDGTVTQLPLVDTNSQNALRRRIVYQHLNKVLPDLLQSLGLLTLTTRSDVRLLVNTFKLKANNIMYKPMQWTLIALIFIKLLSIRDKRLEYLLEHATAYQHMQLLLLSYKLDGGYLERL-ISWLTDIDRLL 566
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BLAST of EMLSAG00000000696 vs. nr
Match: gi|340716286|ref|XP_003396630.1| (PREDICTED: putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 isoform X1 [Bombus terrestris])

HSP 1 Score: 129.798 bits (325), Expect = 3.437e-29
Identity = 64/133 (48.12%), Postives = 94/133 (70.68%), Query Frame = 0 
Query:   51 KIRTGLLRKKQSEATALEIVEKLLDSEIEFLWFEEEALPSLNQMFYKDVIDERSLLKLCGYPLCTHSLPKIIPRQKYHIVSSQRKVYDLTERKKFCSNSCYNASSYILEQLDNEPLWMRDDKPGSERPMIKIL 183
            +++  +++KKQ +A AL IVE LL+ +I+F W     L  +N+   +DVI+ER+++KLCGY LC+++L KII  Q+YHI + + KVYD+T RK FCS+ CY AS+Y+LEQ+   PLW+RD +   E P  KIL
Sbjct:   24 QMQLAIIKKKQCDAKALRIVEHLLEPKIDFQWLLTN-LRYINKSHMEDVIEERAIIKLCGYVLCSNTLTKIID-QRYHISTIKNKVYDITRRKNFCSSHCYGASNYLLEQMPTSPLWLRDKE---EIPEFKIL 151
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BLAST of EMLSAG00000000696 vs. nr
Match: gi|808125139|ref|XP_012165680.1| (PREDICTED: putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 isoform X2 [Bombus terrestris])

HSP 1 Score: 129.413 bits (324), Expect = 4.326e-29
Identity = 64/132 (48.48%), Postives = 93/132 (70.45%), Query Frame = 0 
Query:   52 IRTGLLRKKQSEATALEIVEKLLDSEIEFLWFEEEALPSLNQMFYKDVIDERSLLKLCGYPLCTHSLPKIIPRQKYHIVSSQRKVYDLTERKKFCSNSCYNASSYILEQLDNEPLWMRDDKPGSERPMIKIL 183
            ++  +++KKQ +A AL IVE LL+ +I+F W     L  +N+   +DVI+ER+++KLCGY LC+++L KII  Q+YHI + + KVYD+T RK FCS+ CY AS+Y+LEQ+   PLW+RD +   E P  KIL
Sbjct:    1 MQLAIIKKKQCDAKALRIVEHLLEPKIDFQWLLTN-LRYINKSHMEDVIEERAIIKLCGYVLCSNTLTKIID-QRYHISTIKNKVYDITRRKNFCSSHCYGASNYLLEQMPTSPLWLRDKE---EIPEFKIL 127
[Close]
BLAST of EMLSAG00000000696 vs. nr
Match: gi|1101334675|ref|XP_018902571.1| (PREDICTED: putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 [Bemisia tabaci] >gi|1101334679|ref|XP_018902586.1| PREDICTED: putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 [Bemisia tabaci])

HSP 1 Score: 129.413 bits (324), Expect = 6.262e-29
Identity = 69/165 (41.82%), Postives = 103/165 (62.42%), Query Frame = 0 
Query:   36 KKKPFKKLSEEERREKIRTGLLRKKQSEATALEIVEKLLDSEIEFLWFEEEALPSLNQMFYKDVIDERSLLKLCGYPLCTHSLPKIIPRQKYHIVSSQRKVYDLTERKKFCSNSCYNASSYILEQLDNEPLWMRDDKPGSERPMIKILGKDYGKYPGEEIPLSQA 200
            KK P K LS    +E +R    +KK++   A+ I+EK++DS++E  W  + ++ S+ Q  Y+DV +ER++ +LCGYPLC + L K +P + YHI + Q KVYD+T+RK FCS+ CY AS ++ +QL + PLW+RD      RP  KIL  D G   G E+    +
Sbjct:    8 KKVPKKALS----KEALRVTAQKKKETTIKAMAIIEKMIDSKVEEKWLLD-SVHSITQDQYQDVTEERAITELCGYPLCCNIL-KNVPSKIYHISTRQNKVYDITDRKNFCSSGCYKASIFLKDQLLSSPLWLRD---AEGRPDYKILHIDKGGSLGAEVDFGHS 163

HSP 2 Score: 64.3142 bits (155), Expect = 1.688e-7
Identity = 48/183 (26.23%), Postives = 98/183 (53.55%), Query Frame = 0 
Query:  223 ELEKELETLPDVEELIHGVRQILLDISKETILFGRTDMWMDNEK----EKEDNSELHLRMV---PKVISRTQVVWNQLDSVLPEILTLFGIQMPDISDDVRILIKGFYLTSSNIVFSMHEWTLLALVILEMIRDKNVKLRTVLKSKDAKKYLNMLLLNFDLEEKAISSMIINSIADINLLMHK 398
            E   +L+ LPD   L    +Q  L+I   +   G T + ++        KED+  + L +V    +   R ++V ++L+ +LP++     +   +++  VR L + F  +SSNI F   EW  +A+V+++++  ++  +  +L+S  ++KYL +LL+N+ L+   +  +I+  + DI+ L+ K
Sbjct:  557 EKNADLKPLPDYSLLQREAKQ--LEIKVRSFYEGSTRIEIEEATPQNCNKEDDEGVVLPLVDLHAQKALRRRIVLDRLNVILPDLGRTLNLSTFNLTSAVRSLSQTFNFSSSNITFKPPEWYFIAMVLVKLLSLQDKNMHILLESGSSEKYLTLLLMNWGLDAGYLDRLIL-WLMDIDYLLQK 736
[Close]
BLAST of EMLSAG00000000696 vs. nr
Match: gi|815904971|ref|XP_012238380.1| (PREDICTED: putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 isoform X2 [Bombus impatiens])

HSP 1 Score: 128.642 bits (322), Expect = 6.803e-29
Identity = 63/128 (49.22%), Postives = 92/128 (71.88%), Query Frame = 0 
Query:   56 LLRKKQSEATALEIVEKLLDSEIEFLWFEEEALPSLNQMFYKDVIDERSLLKLCGYPLCTHSLPKIIPRQKYHIVSSQRKVYDLTERKKFCSNSCYNASSYILEQLDNEPLWMRDDKPGSERPMIKIL 183
            +++KKQ +A AL IVE LL+ +I+F W     +  +N+   +DVI+ER+++KLCGY LC+++L KII  Q+YHI +++ KVYD+T RK FCS+ CY AS+Y+LEQ+   PLW+RD +   E P  KIL
Sbjct:    5 IIKKKQCDAKALRIVEHLLEPKIDFQWLLTN-VRYINKSHMEDVIEERAIIKLCGYVLCSNALTKIID-QRYHISTTKNKVYDITRRKNFCSSHCYGASNYLLEQMPTSPLWLRDKE---EIPEFKIL 127
[Close]
BLAST of EMLSAG00000000696 vs. nr
Match: gi|815904969|ref|XP_012238379.1| (PREDICTED: putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 isoform X1 [Bombus impatiens])

HSP 1 Score: 128.642 bits (322), Expect = 6.920e-29
Identity = 63/128 (49.22%), Postives = 92/128 (71.88%), Query Frame = 0 
Query:   56 LLRKKQSEATALEIVEKLLDSEIEFLWFEEEALPSLNQMFYKDVIDERSLLKLCGYPLCTHSLPKIIPRQKYHIVSSQRKVYDLTERKKFCSNSCYNASSYILEQLDNEPLWMRDDKPGSERPMIKIL 183
            +++KKQ +A AL IVE LL+ +I+F W     +  +N+   +DVI+ER+++KLCGY LC+++L KII  Q+YHI +++ KVYD+T RK FCS+ CY AS+Y+LEQ+   PLW+RD +   E P  KIL
Sbjct:   29 IIKKKQCDAKALRIVEHLLEPKIDFQWLLTN-VRYINKSHMEDVIEERAIIKLCGYVLCSNALTKIID-QRYHISTTKNKVYDITRRKNFCSSHCYGASNYLLEQMPTSPLWLRDKE---EIPEFKIL 151
[Close]
BLAST of EMLSAG00000000696 vs. nr
Match: gi|936573356|ref|XP_014218895.1| (PREDICTED: RNA polymerase II subunit B1 CTD phosphatase Rpap2 [Copidosoma floridanum])

HSP 1 Score: 129.028 bits (323), Expect = 8.105e-29
Identity = 72/179 (40.22%), Postives = 115/179 (64.25%), Query Frame = 0 
Query:   25 KSKSSTSSSSSKKKPFKKLSEEERREKIRTGLLRKKQSEATALEIVEKLLDSEIEFLWFEEEALPSLNQMFYKDVIDERSLLKLCGYPLCTHSLPKIIPRQKYHIVSSQRKVYDLTERKKFCSNSCYNASSYILEQLDNEPLWMRDDKPGSERPMIKILGKDY-GK--YPGEEIPLSQA 200
            ++K S  ++S+ KK          RE+I+  +++KK+ +A AL+IVE+LL+ E++  W  E+ L  +N+   +DVI+ER++ ++CGY LC   L  ++ +Q+YHI    ++VYD+++RK FCS+SC+ AS+Y+LEQL   PLWMRD +   E P  KI  KD  GK  + G  + L+Q 
Sbjct:    3 RTKRSPKATSNVKKKMT-------REQIQEAIIKKKECDARALKIVEQLLEPEVDPSWLVEK-LQHINRCHMEDVIEERAITRICGYVLCQKPLT-VVYKQQYHISLKDKQVYDVSKRKNFCSSSCFGASNYLLEQLLTSPLWMRDKE---EIPTFKIFKKDVLGKNNHHGATLDLNQG 169
The following BLAST results are available for this feature:
BLAST of EMLSAG00000000696 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO)
Total hits: 18
Match NameE-valueIdentityDescription
-1.008e-1037.72symbol:rtr1 "RNA polymerase II CTD phosphatase Rtr... [more]
-1.336e-945.71symbol:AT5G26760 "AT5G26760" species:3702 "Arabido... [more]
-5.930e-631.71symbol:RTR1 "CTD phosphatase" species:559292 "Sacc... [more]
-2.271e-431.03symbol:AFUA_2G10310 "DUF408 domain protein" specie... [more]
-2.271e-431.03symbol:Afu2g10310 species:746128 "Aspergillus fumi... [more]
-4.010e-431.68symbol:An16g04680 "Similarity to hypothetical prot... [more]
-4.010e-431.68symbol:An16g04680 species:5061 "Aspergillus niger"... [more]
-4.118e-431.68symbol:ASPNIDRAFT_183811 "Uncharacterized protein"... [more]

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BLAST of EMLSAG00000000696 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA)
Total hits: 3
Match NameE-valueIdentityDescription
gi|592899568|gb|GAXK01058807.1|1.104e-2846.15TSA: Calanus finmarchicus comp126072_c0_seq1 trans... [more]
gi|592794329|gb|GAXK01160239.1|5.003e-139.39TSA: Calanus finmarchicus comp142829_c2_seq1 trans... [more]
gi|592899642|gb|GAXK01058733.1|6.064e+037.25TSA: Calanus finmarchicus comp6104055_c0_seq1 tran... [more]
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BLAST of EMLSAG00000000696 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self)
Total hits: 1
Match NameE-valueIdentityDescription
EMLSAP000000006960.000e+0100.00pep:novel supercontig:LSalAtl2s:LSalAtl2s110:43467... [more]
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BLAST of EMLSAG00000000696 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt)
Total hits: 12
Match NameE-valueIdentityDescription
gi|380877128|sp|A8DYY5.1|RPAP2_DROME9.328e-2943.06RecName: Full=Putative RNA polymerase II subunit B... [more]
gi|115503693|sp|Q8VC34.2|RPAP2_MOUSE2.546e-2832.18RecName: Full=Putative RNA polymerase II subunit B... [more]
gi|81882974|sp|Q5I0E6.1|RPAP2_RAT3.896e-2834.38RecName: Full=RNA polymerase II subunit B1 CTD pho... [more]
gi|74750745|sp|Q8IXW5.1|RPAP2_HUMAN5.334e-2837.57RecName: Full=Putative RNA polymerase II subunit B... [more]
gi|75041829|sp|Q5RA37.1|RPAP2_PONAB8.476e-2837.57RecName: Full=Putative RNA polymerase II subunit B... [more]
gi|380877126|sp|F6RRD7.1|RPAP2_BOVIN5.206e-2741.83RecName: Full=Putative RNA polymerase II subunit B... [more]
gi|380877127|sp|B0UYH6.1|RPAP2_DANRE1.358e-2440.00RecName: Full=Putative RNA polymerase II subunit B... [more]
gi|267548|sp|P30641.1|RPAP2_CAEEL7.043e-1438.82RecName: Full=Putative RNA polymerase II subunit B... [more]
gi|74582120|sp|O42853.1|RPAP2_SCHPO6.506e-1137.72RecName: Full=Putative RNA polymerase II subunit B... [more]
gi|380877125|sp|F4K1B1.1|RPAP2_ARATH1.020e-945.71RecName: Full=Putative RNA polymerase II subunit B... [more]

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BLAST of EMLSAG00000000696 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods)
Total hits: 7
Match NameE-valueIdentityDescription
XP_016768443.19.928e-3043.06PREDICTED: putative RNA polymerase II subunit B1 C... [more]
ABV53661.14.521e-2943.06uncharacterized protein Dmel_CG34183 [Drosophila m... [more]
EDO63560.11.030e-2643.20AGAP008431-PA, partial [Anopheles gambiae str. PES... [more]
gb|EFA00145.2|2.633e-2536.26hypothetical protein TcasGA2_TC002966 [Tribolium c... [more]
gb|KFM57894.1|7.902e-2444.44putative RNA polymerase II subunit B1 CTD phosphat... [more]
EFX69879.11.097e-2239.52hypothetical protein DAPPUDRAFT_300664 [Daphnia pu... [more]
EEB17600.17.403e-2139.57conserved hypothetical protein [Pediculus humanus ... [more]
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BLAST of EMLSAG00000000696 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017))
Total hits: 25
Match NameE-valueIdentityDescription
gi|63102016|gb|AAH95735.1|8.713e-3328.90RNA polymerase II associated protein 2 [Danio reri... [more]
gi|485050345|ref|NP_001019603.2|8.894e-3328.90putative RNA polymerase II subunit B1 CTD phosphat... [more]
gi|998508367|ref|XP_015514552.1|1.105e-2934.48PREDICTED: putative RNA polymerase II subunit B1 C... [more]
gi|914554034|gb|KOB64773.1|3.083e-2942.13putative RNA polymerase II associated protein 2 [O... [more]
gi|340716286|ref|XP_003396630.1|3.437e-2948.12PREDICTED: putative RNA polymerase II subunit B1 C... [more]
gi|808125139|ref|XP_012165680.1|4.326e-2948.48PREDICTED: putative RNA polymerase II subunit B1 C... [more]
gi|1101334675|ref|XP_018902571.1|6.262e-2941.82PREDICTED: putative RNA polymerase II subunit B1 C... [more]
gi|815904971|ref|XP_012238380.1|6.803e-2949.22PREDICTED: putative RNA polymerase II subunit B1 C... [more]
gi|815904969|ref|XP_012238379.1|6.920e-2949.22PREDICTED: putative RNA polymerase II subunit B1 C... [more]
gi|936573356|ref|XP_014218895.1|8.105e-2940.22PREDICTED: RNA polymerase II subunit B1 CTD phosph... [more]

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BLAST of EMLSAG00000000696 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s110supercontigLSalAtl2s110:434670..436202 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Blast vs. GO2014-04-02
TblastN vs C. finmarchicus TSA2014-05-09
Blastp vs. self2014-05-10
Blastp vs. SwissProt2017-02-10
Blastp vs. Selected Arthropods2017-02-20
Blastp vs. NR (2/2017)2017-02-20
Blastp vs. Tigriopus kingsejongensis proteins2018-04-18
Properties
Property NameValue
Logic nameensemblgenomes
Descriptionsnap_masked-LSalAtl2s110-processed-gene-4.16
Biotypeprotein_coding
EvidenceIEA
NotePutative RNA polymerase II subunit B1 CTD phosphatase Rpap2
Cross References
External references for this gene
DatabaseAccession
Ensembl Metazoa (gene)EMLSAG00000000696 (primary cross-reference)
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
EMLSAT00000000696EMLSAT00000000696-696543Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at LSalAtl2s110:434670..436202-

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAG00000000696-683462 ID=EMLSAG00000000696-683462|Name=EMLSAG00000000696|organism=Lepeophtheirus salmonis|type=gene|length=1533bp|location=Sequence derived from alignment at LSalAtl2s110:434670..436202- (Lepeophtheirus salmonis)
ATGATTGGAAATTCGCAAATTGACTGCGAAATGACGGAGGAAGAAATTTT
TGAAATTGCCCGTGAGGCTTTGAAGAGTAAGTCCTCTACAAGCTCCTCCT
CTTCGAAGAAAAAACCCTTTAAAAAGTTATCTGAAGAGGAACGTCGTGAA
AAAATTCGTACAGGTCTTCTTAGAAAGAAGCAATCGGAGGCTACTGCTTT
AGAGATTGTTGAAAAATTATTAGATTCTGAGATTGAATTTCTCTGGTTTG
AAGAAGAAGCTCTTCCAAGCTTGAACCAAATGTTTTATAAGGACGTTATA
GATGAAAGGAGTTTGCTCAAATTGTGTGGATATCCACTTTGCACTCATTC
ACTACCCAAAATCATTCCCCGTCAAAAATATCACATTGTGTCCTCACAAC
GAAAAGTCTATGACCTGACGGAACGGAAAAAATTCTGCTCCAATTCCTGC
TATAATGCATCCTCTTATATTTTAGAGCAACTTGACAATGAGCCCCTCTG
GATGAGAGATGATAAACCAGGGTCAGAGAGGCCAATGATTAAAATCCTTG
GAAAAGACTATGGGAAATATCCAGGTGAAGAAATTCCTCTATCACAGGCA
GAATCTCCTGAAATTGGGGATACAAAGAGCTTTTGCGATCCAAAAACGCA
TGAAGAGATTGAGGATGAATTAGAAAAAGAATTAGAGACTCTACCTGACG
TTGAAGAACTCATACAGTCATTAAATATTAATTCAGATGCTCCTATTAGG
AATCAAACCCTAATCTCATTGCCTCCTAAGCCCAAAAAGACAAACTCATC
TCCGATTGAATTAATTAAATTACGACTCAAAGAGTGGTGTACGACAGATA
CTCTTAGATATCTCAAAGGAGACGATTTTGTTTGGTATTCTCTTGTAGAA
AATAACTATGGACCCGAGAAGATATTTCAAGTTCTTGGAGAAAATCCGAA
TTTATCCCCTGGCATTGCTACTGCCTTCAATGAAATGATTACGGCTGYTA
TAATCAATAATAAAGTTACCGAATCTCTGAAGTTCTCATTGGATCCTATG
GATAATTTGAAACTAATGACTTTTCTTAAAGGTAGAACAGATATGTGGAT
GGACAACGAAAAAGAGAAGGAGGATAATAGTGAATTGCACTTGAGAATGG
TTCCAAAAGTAATTAGTCGTACTCAAGTTGTATGGAATCAATTGGACTCT
GTGCTACCAGAAATATTGACTTTATTTGGGATTCAAATGCCTGACATATC
GGATGATGTTCGAATCCTAATTAAAGGATTTTATTTAACGTCTTCAAATA
TTGTTTTTTCAATGCATGAGTGGACATTATTAGCCCTTGTTATTTTAGAG
ATGATTCGTGATAAAAATGTTAAACTCAGAACTGTTTTAAAGTCTAAGGA
CGCTAAGAAATATTTGAATATGTTATTGTTAAATTTTGATCTGGAAGAAA
AGGCAATTTCGAGTATGATCATCAACTCCATTGCTGATATTAACTTACTT
ATGCATAAGGGTGCCTTTAAATCAAATGGATAA
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