EMLSAG00000000716, EMLSAG00000000716-683482 (gene) Lepeophtheirus salmonis

Overview


Name	EMLSAG00000000716
Unique Name	EMLSAG00000000716-683482
Type	gene
Organism	Lepeophtheirus salmonis (salmon louse)

Associated RNAi Experiments

Nothing found

Homology

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BLAST of EMLSAG00000000716 vs. GO
Match: - (symbol:Cabp1 "calcium binding protein 1" species:10116 "Rattus norvegicus" [GO:0000139 "Golgi membrane" evidence=IEA;ISO] [GO:0005509 "calcium ion binding" evidence=IDA] [GO:0005515 "protein binding" evidence=IPI] [GO:0005615 "extracellular space" evidence=ISO] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0005856 "cytoskeleton" evidence=IDA] [GO:0005886 "plasma membrane" evidence=ISO;IDA] [GO:0007275 "multicellular organismal development" evidence=IEA] [GO:0008139 "nuclear localization sequence binding" evidence=IDA] [GO:0009898 "cytoplasmic side of plasma membrane" evidence=IDA] [GO:0010651 "negative regulation of cell communication by electrical coupling" evidence=IDA] [GO:0014069 "postsynaptic density" evidence=ISO;IDA] [GO:0019904 "protein domain specific binding" evidence=IPI] [GO:0030425 "dendrite" evidence=IDA] [GO:0031800 "type 3 metabotropic glutamate receptor binding" evidence=IPI] [GO:0042308 "negative regulation of protein import into nucleus" evidence=IMP] [GO:0042803 "protein homodimerization activity" evidence=IDA] [GO:0043025 "neuronal cell body" evidence=IDA] [GO:0043234 "protein complex" evidence=IDA] [GO:0044325 "ion channel binding" evidence=IPI] [GO:0048167 "regulation of synaptic plasticity" evidence=NAS] [GO:0048306 "calcium-dependent protein binding" evidence=ISO;IDA;IPI] [GO:0048471 "perinuclear region of cytoplasm" evidence=IDA] [GO:1901385 "regulation of voltage-gated calcium channel activity" evidence=IDA] [GO:1901386 "negative regulation of voltage-gated calcium channel activity" evidence=IDA] InterPro:IPR002048 InterPro:IPR011992 Pfam:PF00036 PROSITE:PS50222 SMART:SM00054 Prosite:PS00018 RGD:620385 GO:GO:0007275 GO:GO:0005829 GO:GO:0005634 GO:GO:0048471 GO:GO:0048167 GO:GO:0043234 GO:GO:0042803 GO:GO:0014069 GO:GO:0000139 GO:GO:0005509 Gene3D:1.10.238.10 InterPro:IPR018247 GO:GO:0043025 GO:GO:0030425 GO:GO:0048306 GO:GO:0042308 GO:GO:0009898 GO:GO:0008139 CTD:9478 eggNOG:COG5126 GeneTree:ENSGT00740000114946 HOGENOM:HOG000233018 HOVERGEN:HBG012180 OMA:MRQEEKT OrthoDB:EOG7XM303 InterPro:IPR015754 PANTHER:PTHR23050:SF21 GO:GO:0010651 GO:GO:1901386 EMBL:Y17048 EMBL:AJ315761 EMBL:AJ315657 RefSeq:NP_001028847.1 RefSeq:NP_001028848.1 RefSeq:NP_598213.1 UniGene:Rn.23560 ProteinModelPortal:O88751 IntAct:O88751 PaxDb:O88751 PRIDE:O88751 Ensembl:ENSRNOT00000001551 Ensembl:ENSRNOT00000001552 Ensembl:ENSRNOT00000039281 GeneID:171051 KEGG:rno:171051 UCSC:RGD:620385 InParanoid:O88751 NextBio:621595 ArrayExpress:O88751 Genevestigator:O88751 Uniprot:O88751)

HSP 1 Score: 43.8986 bits (102), Expect = 1.747e-4
Identity = 23/55 (41.82%), Postives = 31/55 (56.36%), Query Frame = 0

Query:  106 SFKTIDRNSDGYLSKGEL-----KLANKDSRMVDIEEVMRDADLNMDKRIDYAEY 155
            +F+  D N DG +S  EL     KL        DIEE++RD DLN D R+D+ E+
Sbjct:  238 AFREFDTNGDGEISTSELREAMRKLLGHQVGHRDIEEIIRDVDLNGDGRVDFEEF 292

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BLAST of EMLSAG00000000716 vs. GO
Match: - (symbol:CABP1 "Calcium-binding protein 1" species:9606 "Homo sapiens" [GO:0000139 "Golgi membrane" evidence=IDA] [GO:0004857 "enzyme inhibitor activity" evidence=TAS] [GO:0005509 "calcium ion binding" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI] [GO:0005615 "extracellular space" evidence=IDA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IDA] [GO:0005938 "cell cortex" evidence=IEA] [GO:0008139 "nuclear localization sequence binding" evidence=ISS] [GO:0009898 "cytoplasmic side of plasma membrane" evidence=IEA] [GO:0010651 "negative regulation of cell communication by electrical coupling" evidence=IEA] [GO:0014069 "postsynaptic density" evidence=IDA] [GO:0019904 "protein domain specific binding" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0030425 "dendrite" evidence=IEA] [GO:0031800 "type 3 metabotropic glutamate receptor binding" evidence=IEA] [GO:0042308 "negative regulation of protein import into nucleus" evidence=ISS] [GO:0042803 "protein homodimerization activity" evidence=IEA] [GO:0043025 "neuronal cell body" evidence=IEA] [GO:0043086 "negative regulation of catalytic activity" evidence=TAS] [GO:0043234 "protein complex" evidence=IEA] [GO:0044325 "ion channel binding" evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0048306 "calcium-dependent protein binding" evidence=IPI] [GO:0048471 "perinuclear region of cytoplasm" evidence=IEA] [GO:1901386 "negative regulation of voltage-gated calcium channel activity" evidence=IEA] InterPro:IPR002048 InterPro:IPR011992 Pfam:PF00036 PROSITE:PS50222 SMART:SM00054 Prosite:PS00018 GO:GO:0005829 GO:GO:0005886 GO:GO:0005938 GO:GO:0005634 GO:GO:0048471 GO:GO:0005615 GO:GO:0043234 GO:GO:0014069 GO:GO:0000139 GO:GO:0005509 Gene3D:1.10.238.10 InterPro:IPR018247 GO:GO:0043025 GO:GO:0030054 GO:GO:0045211 GO:GO:0030425 GO:GO:0004857 GO:GO:0042308 GO:GO:0009898 GO:GO:0008139 CTD:9478 eggNOG:COG5126 HOGENOM:HOG000233018 HOVERGEN:HBG012180 OrthoDB:EOG7XM303 TreeFam:TF334804 InterPro:IPR015754 PANTHER:PTHR23050:SF21 EMBL:X94700 EMBL:AF169148 EMBL:AF169149 EMBL:AC069234 EMBL:BC030201 RefSeq:NP_001028849.1 RefSeq:NP_004267.2 RefSeq:NP_112482.1 UniGene:Hs.458482 PDB:2K7B PDB:2K7C PDB:2K7D PDB:2LAN PDB:2LAP PDB:3OX5 PDB:3OX6 PDBsum:2K7B PDBsum:2K7C PDBsum:2K7D PDBsum:2LAN PDBsum:2LAP PDBsum:3OX5 PDBsum:3OX6 ProteinModelPortal:Q9NZU7 SMR:Q9NZU7 BioGrid:114863 DIP:DIP-35477N IntAct:Q9NZU7 STRING:9606.ENSP00000317310 PhosphoSite:Q9NZU7 DMDM:257051082 PaxDb:Q9NZU7 PRIDE:Q9NZU7 DNASU:9478 Ensembl:ENST00000288616 Ensembl:ENST00000316803 Ensembl:ENST00000351200 GeneID:9478 KEGG:hsa:9478 UCSC:uc001tyu.3 UCSC:uc001tyv.4 UCSC:uc001tyw.4 GeneCards:GC12P121078 HGNC:HGNC:1384 HPA:HPA051438 MIM:605563 neXtProt:NX_Q9NZU7 PharmGKB:PA26000 ChiTaRS:CABP1 EvolutionaryTrace:Q9NZU7 GenomeRNAi:9478 NextBio:35520 PRO:PR:Q9NZU7 ArrayExpress:Q9NZU7 Bgee:Q9NZU7 CleanEx:HS_CABP1 Genevestigator:Q9NZU7 GO:GO:0010651 GO:GO:1901386 Uniprot:Q9NZU7)

HSP 1 Score: 44.2838 bits (103), Expect = 1.812e-4
Identity = 23/55 (41.82%), Postives = 31/55 (56.36%), Query Frame = 0

Query:  106 SFKTIDRNSDGYLSKGEL-----KLANKDSRMVDIEEVMRDADLNMDKRIDYAEY 155
            +F+  D N DG +S  EL     KL        DIEE++RD DLN D R+D+ E+
Sbjct:  310 AFREFDTNGDGEISTSELREAMRKLLGHQVGHRDIEEIIRDVDLNGDGRVDFEEF 364

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BLAST of EMLSAG00000000716 vs. GO
Match: - (symbol:cal-5 "Protein CAL-5" species:6239 "Caenorhabditis elegans" [GO:0005509 "calcium ion binding" evidence=IEA] InterPro:IPR002048 InterPro:IPR011992 Pfam:PF00036 PROSITE:PS50222 SMART:SM00054 Prosite:PS00018 GO:GO:0005509 Gene3D:1.10.238.10 InterPro:IPR018247 eggNOG:COG5126 HOGENOM:HOG000233018 GeneTree:ENSGT00670000097718 OMA:GACCSSK EMBL:FO080658 PIR:T15596 RefSeq:NP_508864.2 UniGene:Cel.19801 ProteinModelPortal:Q18136 SMR:Q18136 STRING:6239.C24H10.5 PaxDb:Q18136 PRIDE:Q18136 EnsemblMetazoa:C24H10.5 GeneID:192083 KEGG:cel:CELE_C24H10.5 UCSC:C24H10.5 CTD:192083 WormBase:C24H10.5 InParanoid:Q18136 OrthoDB:EOG70PC03 NextBio:951514 Uniprot:Q18136)

HSP 1 Score: 42.3578 bits (98), Expect = 2.876e-4
Identity = 33/117 (28.21%), Postives = 59/117 (50.43%), Query Frame = 0

Query:   51 DSLLPCEYLNVINNELGIRLSMEELDGILQYLPRKDDTREILLKDFMEMKLISPLS------FKTIDRNSDGYLSKGELKLANKDSRM------VDIEEVMRDADLNMDKRIDYAEY 155
            D  +  E L  +  ++G   + +ELD + Q    KD    I  ++F+ +   +PLS      F+ +D + DGY+++ EL+ A +  RM       DI+ + R  D N D +I++ E+
Sbjct:   35 DGYIQREELRAVMQKMGQSPTEDELDAMFQ-AADKDCDGNIDFQEFLVIAKANPLSLSLKAVFEELDVDGDGYITRSELRTAFQ--RMGHSLSDQDIKAIYRHVDQNNDGKINFQEF 148

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BLAST of EMLSAG00000000716 vs. GO
Match: - (symbol:tnnc1b "troponin C type 1b (slow)" species:7955 "Danio rerio" [GO:0005509 "calcium ion binding" evidence=IEA] [GO:0005575 "cellular_component" evidence=ND] [GO:0060048 "cardiac muscle contraction" evidence=IMP] [GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001125 InterPro:IPR002048 InterPro:IPR011992 Pfam:PF13499 PRINTS:PR00450 PROSITE:PS50222 SMART:SM00054 Prosite:PS00018 ZFIN:ZDB-GENE-040625-62 GO:GO:0005509 Gene3D:1.10.238.10 InterPro:IPR018247 GO:GO:0060048 eggNOG:COG5126 HOGENOM:HOG000233018 HOVERGEN:HBG012180 GeneTree:ENSGT00690000101871 TreeFam:TF318191 KO:K05865 OrthoDB:EOG76X61W EMBL:AL953864 EMBL:BC071546 RefSeq:NP_001002085.1 UniGene:Dr.31101 STRING:7955.ENSDARP00000054663 Ensembl:ENSDART00000054664 GeneID:415175 KEGG:dre:415175 CTD:415175 InParanoid:Q6IQ64 OMA:CMKEESK NextBio:20818845 PRO:PR:Q6IQ64 Uniprot:Q6IQ64)

HSP 1 Score: 41.5874 bits (96), Expect = 7.214e-4
Identity = 24/59 (40.68%), Postives = 34/59 (57.63%), Query Frame = 0

Query:  107 FKTIDRNSDGYLSKGELK--LANKDSRMV--DIEEVMRDADLNMDKRIDYAEYQIYTSG 161
            F+  D+N DGY+   ELK  L +    +   DIEE+M+D D N D +IDY E+  +  G
Sbjct:  101 FRMFDKNGDGYIDLDELKNMLESTGEAITEDDIEELMKDGDKNNDGKIDYDEFLDFMKG 159

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BLAST of EMLSAG00000000716 vs. C. finmarchicus
Match: gi|592834918|gb|GAXK01122626.1| (TSA: Calanus finmarchicus comp2415630_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 83.1889 bits (204), Expect = 3.966e-19
Identity = 41/100 (41.00%), Postives = 68/100 (68.00%), Query Frame = 0

Query:   57 EYLNVINNELGIRLSMEELDGILQYLPRKDDTREILLKDFMEMKLISPLSFKTIDRNSDGYLSKGELKLANKDSRMVDIEEVMRDADLNMDKRIDYAEYQ 156
            E+ NVI  + G+  S E++    ++LP K  + +I ++DF+ + ++S   FKTIDRN DG++S GELKLANK   M DI++ ++  DL++D++++  EYQ
Sbjct:  151 EWFNVIKLQNGVECSREQISKACEHLP-KSKSGKIKIEDFIHLPILSEEVFKTIDRNKDGFISIGELKLANKQYSMRDIDKTIKAHDLDLDRKLNLEEYQ 447

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BLAST of EMLSAG00000000716 vs. C. finmarchicus
Match: gi|592916722|gb|GAXK01041653.1| (TSA: Calanus finmarchicus comp325900_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 77.7962 bits (190), Expect = 3.600e-17
Identity = 37/103 (35.92%), Postives = 67/103 (65.05%), Query Frame = 0

Query:   53 LLPCEYLNVINNELGIRLSMEELDGILQYLPRKDDTREILLKDFMEMKLISPLSFKTIDRNSDGYLSKGELKLANKDSRMVDIEEVMRDADLNMDKRIDYAEY 155
            L P E+ NV+  + G+  + EE+  +   LP   D + I ++DF+ + + S  +F+ +DRN DGY++KGELKLA K   M ++++V+++ D++ D ++DY E+
Sbjct:  145 LTPDEFFNVLKLQNGVECTKEEVKTVCGPLPCTKDGK-IKIRDFLYLDIHSESAFRAMDRNKDGYITKGELKLAKKKMTMKEVDQVIKEYDIDQDGKLDYNEF 450

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BLAST of EMLSAG00000000716 vs. C. finmarchicus
Match: gi|592907183|gb|GAXK01051192.1| (TSA: Calanus finmarchicus comp2942403_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 73.559 bits (179), Expect = 1.403e-15
Identity = 49/152 (32.24%), Postives = 86/152 (56.58%), Query Frame = 0

Query:    7 LSTTALIQILARVHGSQKCIKSLSSIFEDKCIHYNSVEDTASLRDSLLPCEYLNVINNELGIRLSMEELDGILQYLPRKDDTREILLKDFMEMKLISPLSFKTIDRNSDGYLSKGELKLANKDSRMVDIEEVMRDADLNMDKRIDYAEYQIY 158
            LS +A+ QIL     S+K +K        K I  ++ +   S +  L   E  NV+  +  +    E++  I  +LPR   T ++ + +F+ + +IS  +F  IDRN DG+L+KGE+KL NK++ M ++ EV+ D DL+ D +++ +EY+ +
Sbjct:   74 LSLSAVRQILT---ASRKSLKPEEEEELIKRIEESAKKFDPSGKGELSDKEMFNVLKIQNKVECKQEQVFSICSHLPR-GRTGKMRIAEFINLPIISEETFTAIDRNKDGFLTKGEIKLTNKNASMSEVLEVINDHDLDKDGKLNLSEYRDF 517

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BLAST of EMLSAG00000000716 vs. C. finmarchicus
Match: gi|592955360|gb|GAXK01003196.1| (TSA: Calanus finmarchicus comp186710_c0_seq2 transcribed RNA sequence)

HSP 1 Score: 55.8398 bits (133), Expect = 5.106e-9
Identity = 41/140 (29.29%), Postives = 72/140 (51.43%), Query Frame = 0

Query:    6 LLSTTALIQILARVHG--SQKCIKSLSSIFEDKCIHYNSVEDTASLRDSLLPCEYLNVINNELGIRLSMEELDGILQYLPRKDDTREILLKDFMEMKLISPLSFKTIDRNSDGYLSKGELKLANKDSRMVDIEEVMRDAD 143
            LL   AL+Q++ +     ++K  K L    E +C  ++        +  L   +Y +V+  +  + L+  ++  ++  LP  D   +I ++DF    ++S   FK +D+N+DG +SKGELKLA KD  M  I+ +M   D
Sbjct:  271 LLGQPALVQLVDKADNGKNEKEKKELLRKIETQCKSFDG-------KGKLTVDDYYSVLKVQCKVDLTKNDIRKVVADLPM-DKNYKISVQDFCRTPILSDEVFKAMDKNNDGQISKGELKLARKDLTMKQIQSIMSKLD 666

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BLAST of EMLSAG00000000716 vs. C. finmarchicus
Match: gi|592955359|gb|GAXK01003197.1| (TSA: Calanus finmarchicus comp186710_c0_seq3 transcribed RNA sequence)

HSP 1 Score: 52.7582 bits (125), Expect = 3.727e-8
Identity = 30/87 (34.48%), Postives = 51/87 (58.62%), Query Frame = 0

Query:   57 EYLNVINNELGIRLSMEELDGILQYLPRKDDTREILLKDFMEMKLISPLSFKTIDRNSDGYLSKGELKLANKDSRMVDIEEVMRDAD 143
            +Y +V+  +  + L+  ++  ++  LP  D   +I ++DF    ++S   FK +D+N+DG +SKGELKLA KD  M  I+ +M   D
Sbjct:  279 DYYSVLKVQCKVDLTKNDIRKVVADLPM-DKNYKISVQDFCRTPILSDEVFKAMDKNNDGQISKGELKLARKDLTMKQIQSIMSKLD 536

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BLAST of EMLSAG00000000716 vs. C. finmarchicus
Match: gi|592955361|gb|GAXK01003195.1| (TSA: Calanus finmarchicus comp186710_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 48.521 bits (114), Expect = 2.254e-6
Identity = 31/91 (34.07%), Postives = 54/91 (59.34%), Query Frame = 0

Query:   57 EYLNVINNELGIRLSMEELDGILQYLPRKDDTREILLKDFMEMKLISPLSFKTIDRNSDGYLSKGELKLANKDSRMVDIEEVMR--DADLN 145
            +Y +V+  +  + L+  ++  ++  LP  D   +I ++DF    ++S   FK +D+N+DG +SKGELKLA K+  +  IE ++   DAD N
Sbjct:  279 DYYSVLKVQCKVDLTKNDIRKVVADLPM-DKNYKISVQDFCRTPILSDEVFKAMDKNNDGQISKGELKLARKNLTLKQIEMLISKLDADGN 548

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BLAST of EMLSAG00000000716 vs. C. finmarchicus
Match: gi|592814518|gb|GAXK01140050.1| (TSA: Calanus finmarchicus comp687402_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 47.7506 bits (112), Expect = 2.788e-6
Identity = 31/105 (29.52%), Postives = 58/105 (55.24%), Query Frame = 0

Query:   57 EYLNVINNELGIRLSMEELDGILQYLPRKDDTREILL--KDFMEMKLISPLSFKTIDRNSDGYLSKGELKLANKDS----RMVDIEEVMRDADLNMDKRIDYAEY 155
            EY+ V   E G+ ++ EE   +  Y   KD  R+ L+  ++F   K ++  +F+ +D NSDGY+SK E+  A++ +       ++E   ++ D N D ++ Y+E+
Sbjct:  125 EYVRVFR-EHGVNITKEE---VSIYFSSKDKDRDGLISYQEFCGRKTVTEKAFEALDINSDGYISKPEMIAASQRTGRRLSKTEVEATFKEYDQNKDNKLSYSEF 427

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BLAST of EMLSAG00000000716 vs. C. finmarchicus
Match: gi|592813090|gb|GAXK01141478.1| (TSA: Calanus finmarchicus comp190429_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 45.4394 bits (106), Expect = 7.935e-6
Identity = 29/109 (26.61%), Postives = 52/109 (47.71%), Query Frame = 0

Query:   50 RDSLLPCEYLNVINNELGIRLSMEELDGILQYLPRKDDTREILLKDFMEMKLISPLSFKTIDRNSDGYLSKGELKLANKDSRMVDIEEVMRDADLNMDKRIDYAEYQIY 158
            +D  L  E    +  + G+  + E++D     + R  D R + L++FM  +      FK +D+N DG+++K E +   K      ++      D N D R+DY E+ I+
Sbjct:  113 KDGKLTTEEWREVLEQSGVNTTQEQVDKFFATMDRDFDGR-LTLEEFMGEETPIEKLFKLMDKNGDGFVTKKEFQTICKKLSKEQVKIAFSQFDTNGDDRLDYREFCIF 436

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BLAST of EMLSAG00000000716 vs. C. finmarchicus
Match: gi|592810563|gb|GAXK01144005.1| (TSA: Calanus finmarchicus comp1988307_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 45.0542 bits (105), Expect = 1.609e-5
Identity = 33/107 (30.84%), Postives = 53/107 (49.53%), Query Frame = 0

Query:   53 LLPCEYLNVINNELGIRLSMEELDGILQYLPRKDDTR----EILLKDFMEMKLISPLSFKTIDRNSDGYLSKGELKLANKDSRMVDIEEVMRDADLNMDKRIDYAEY 155
            L P E+ N++ +  G+  + EE+D     + R  D R    EI+ +D    KL     FK +D+N DGY++K E K   K      ++   +  D N D R++Y E+
Sbjct:   54 LSPEEWKNLLTS-AGLTGTSEEVDHFFATIDRDFDGRLSFAEIMGEDTSVEKL-----FKIMDKNGDGYVTKNEFKTICKKLTKEQVQIAFKKFDTNGDNRLNYREF 356

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BLAST of EMLSAG00000000716 vs. C. finmarchicus
Match: gi|592762147|gb|GAXK01192266.1| (TSA: Calanus finmarchicus comp910522_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 43.8986 bits (102), Expect = 7.022e-5
Identity = 25/103 (24.27%), Postives = 51/103 (49.51%), Query Frame = 0

Query:   53 LLPCEYLNVINNELGIRLSMEELDGILQYLPRKDDTREILLKDFMEMKLISPLSFKTIDRNSDGYLSKGELKLANKDSRMVDIEEVMRDADLNMDKRIDYAEY 155
            +   E+  V+N   G+  +M E+DG  + L +  D + +   +F+  +      F+T+D+N+DG++SK E      +     ++      D N D +++Y E+
Sbjct:  130 ITKAEWFKVLNT-AGVPTTMREVDGFFKILDKDLDGK-LSFSEFLGEESHIERIFRTMDKNNDGFVSKEEFHSVCPNLTAAQVDTAFSTFDTNNDGQLNYREF 432

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BLAST of EMLSAG00000000716 vs. L. salmonis peptides
Match: EMLSAP00000000716 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1110:72574:73323:1 gene:EMLSAG00000000716 transcript:EMLSAT00000000716 description:"maker-LSalAtl2s1110-augustus-gene-0.27")

HSP 1 Score: 327.791 bits (839), Expect = 1.087e-115
Identity = 162/162 (100.00%), Postives = 162/162 (100.00%), Query Frame = 0

Query:    1 MNNKELLSTTALIQILARVHGSQKCIKSLSSIFEDKCIHYNSVEDTASLRDSLLPCEYLNVINNELGIRLSMEELDGILQYLPRKDDTREILLKDFMEMKLISPLSFKTIDRNSDGYLSKGELKLANKDSRMVDIEEVMRDADLNMDKRIDYAEYQIYTSGD 162
            MNNKELLSTTALIQILARVHGSQKCIKSLSSIFEDKCIHYNSVEDTASLRDSLLPCEYLNVINNELGIRLSMEELDGILQYLPRKDDTREILLKDFMEMKLISPLSFKTIDRNSDGYLSKGELKLANKDSRMVDIEEVMRDADLNMDKRIDYAEYQIYTSGD
Sbjct:    1 MNNKELLSTTALIQILARVHGSQKCIKSLSSIFEDKCIHYNSVEDTASLRDSLLPCEYLNVINNELGIRLSMEELDGILQYLPRKDDTREILLKDFMEMKLISPLSFKTIDRNSDGYLSKGELKLANKDSRMVDIEEVMRDADLNMDKRIDYAEYQIYTSGD 162

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BLAST of EMLSAG00000000716 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold373_size192110-snap-gene-0.37 (protein:Tk03500 transcript:maker-scaffold373_size192110-snap-gene-0.37-mRNA-1 annotation:"hypothetical protein PRUPE_ppa012426mg")

HSP 1 Score: 72.0182 bits (175), Expect = 1.541e-16
Identity = 45/158 (28.48%), Postives = 94/158 (59.49%), Query Frame = 0

Query:    6 LLSTTALIQILARVH-GSQKCIKSLSSIFEDKCIHYNSVEDTASLRDSLLPCEYLNVINNELGIRLSMEELDGILQYLPRKDDTREILLKDFMEMKLISPLSFKTIDRNSDGYLSKGELKLANKDSRMVDIEEVMRDADLNMDKRIDYAEYQIYTSGD 162
            LL   A+ Q++++++  SQ  ++ +  ++++ C+ ++    + +L +S    ++ NV+  +  + +  +EL  I+  LPR D   +I + DF  + + S  +F+ +D+N DG+++KGE+KLA K   + DI++ ++D DL+ D  ++  E+Q   SGD
Sbjct:   28 LLGIPAVKQVVSKLNKSSQDEVELVQKLYKN-CVQFDHA-GSGTLSES----DFFNVLKIQNKVPIEKDELKAIMAPLPR-DKGGKIKIDDFFTLDIHSSTAFEAMDKNKDGFITKGEMKLAKKSVPLKDIDKCIKDHDLDDDGMLNLDEFQ--KSGD 176

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BLAST of EMLSAG00000000716 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold373_size192110-snap-gene-0.36 (protein:Tk03503 transcript:maker-scaffold373_size192110-snap-gene-0.36-mRNA-1 annotation:"PREDICTED: calmodulin-4-like")

HSP 1 Score: 51.6026 bits (122), Expect = 8.195e-9
Identity = 31/97 (31.96%), Postives = 56/97 (57.73%), Query Frame = 0

Query:   60 NVINNELGIRLSMEELDGILQYLPRKDDTREILLKDFMEMKLISPLSFKTIDRNSDGYLSKGELKLANKDSRMVDIEEVMRDADLNMDKRIDYAEYQ 156
            NV+  +  I  S +++  + + L  KD    + ++DF+ M +IS   F  +D+N DG++SKGELK+A K   M +++ ++   D N D ++ Y E +
Sbjct:   70 NVVKLQNKIDTSKDDIQEVTRDLD-KDADGNVAIEDFVYMPIISESVFAAMDKNKDGFVSKGELKMAQKSLSMSELKSIIDSIDKNSDGQLTYDEVK 165

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BLAST of EMLSAG00000000716 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold144_size312663-snap-gene-0.7 (protein:Tk07265 transcript:maker-scaffold144_size312663-snap-gene-0.7-mRNA-1 annotation:"Calmodulin")

HSP 1 Score: 51.2174 bits (121), Expect = 9.954e-9
Identity = 33/105 (31.43%), Postives = 62/105 (59.05%), Query Frame = 0

Query:   57 EYLNVINNELGIRLSMEELDGILQYLPRKDDTRE--ILLKDFMEMKLISPLSFKTIDRNSDGYLSKGE-LKLANKDSRMV---DIEEVMRDADLNMDKRIDYAEY 155
            EY+ V  +  GI ++ +E   ++ +   KD  R+  I  ++F + + ++  +FK +D N+DG++SK E LK +N+ +R +   DIE   R+ D + DK++ Y E+
Sbjct:   43 EYVGVFQDH-GIAITQDE---VMMFFNSKDRDRDGRISYEEFCDKETVNERAFKAMDINNDGFVSKAEMLKASNRSTRRLSADDIEACFREFDKDRDKKLSYEEF 143

The following BLAST results are available for this feature:

BLAST of EMLSAG00000000716 vs. GO
BLAST of EMLSAG00000000716 vs. C. finmarchicus
BLAST of EMLSAG00000000716 vs. L. salmonis peptides
BLAST of EMLSAG00000000716 vs. SwissProt
BLAST of EMLSAG00000000716 vs. Select Arthropod Genomes
BLAST of EMLSAG00000000716 vs. nr
BLAST of EMLSAG00000000716 vs. Tigriopus kingsejongenis genes

BLAST of EMLSAG00000000716 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO)
Total hits: 24


Match Name	E-value	Identity	Description
-	1.747e-4	41.82	symbol:Cabp1 "calcium binding protein 1" species:1...	[more]
-	1.812e-4	41.82	symbol:CABP1 "Calcium-binding protein 1" species:9...	[more]
-	2.876e-4	28.21	symbol:cal-5 "Protein CAL-5" species:6239 "Caenorh...	[more]
-	7.214e-4	40.68	symbol:tnnc1b "troponin C type 1b (slow)" species:...	[more]

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BLAST of EMLSAG00000000716 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA)
Total hits: 25


Match Name	E-value	Identity	Description
gi\|592834918\|gb\|GAXK01122626.1\|	3.966e-19	41.00	TSA: Calanus finmarchicus comp2415630_c0_seq1 tran...	[more]
gi\|592916722\|gb\|GAXK01041653.1\|	3.600e-17	35.92	TSA: Calanus finmarchicus comp325900_c0_seq1 trans...	[more]
gi\|592907183\|gb\|GAXK01051192.1\|	1.403e-15	32.24	TSA: Calanus finmarchicus comp2942403_c0_seq1 tran...	[more]
gi\|592955360\|gb\|GAXK01003196.1\|	5.106e-9	29.29	TSA: Calanus finmarchicus comp186710_c0_seq2 trans...	[more]
gi\|592955359\|gb\|GAXK01003197.1\|	3.727e-8	34.48	TSA: Calanus finmarchicus comp186710_c0_seq3 trans...	[more]
gi\|592955361\|gb\|GAXK01003195.1\|	2.254e-6	34.07	TSA: Calanus finmarchicus comp186710_c0_seq1 trans...	[more]
gi\|592814518\|gb\|GAXK01140050.1\|	2.788e-6	29.52	TSA: Calanus finmarchicus comp687402_c0_seq1 trans...	[more]
gi\|592813090\|gb\|GAXK01141478.1\|	7.935e-6	26.61	TSA: Calanus finmarchicus comp190429_c0_seq1 trans...	[more]
gi\|592810563\|gb\|GAXK01144005.1\|	1.609e-5	30.84	TSA: Calanus finmarchicus comp1988307_c0_seq1 tran...	[more]
gi\|592762147\|gb\|GAXK01192266.1\|	7.022e-5	24.27	TSA: Calanus finmarchicus comp910522_c0_seq1 trans...	[more]

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BLAST of EMLSAG00000000716 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self)
Total hits: 1


Match Name	E-value	Identity	Description
EMLSAP00000000716	1.087e-115	100.00	pep:novel supercontig:LSalAtl2s:LSalAtl2s1110:7257...	[more]

BLAST of EMLSAG00000000716 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt)
Total hits: 0


Match Name	E-value	Identity	Description

BLAST of EMLSAG00000000716 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods)
Total hits: 0


Match Name	E-value	Identity	Description

BLAST of EMLSAG00000000716 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017))
Total hits: 0


Match Name	E-value	Identity	Description

BLAST of EMLSAG00000000716 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins)
Total hits: 3


Match Name	E-value	Identity	Description
maker-scaffold373_size192110-snap-gene-0.37	1.541e-16	28.48	protein:Tk03500 transcript:maker-scaffold373_size1...	[more]
maker-scaffold373_size192110-snap-gene-0.36	8.195e-9	31.96	protein:Tk03503 transcript:maker-scaffold373_size1...	[more]
maker-scaffold144_size312663-snap-gene-0.7	9.954e-9	31.43	protein:Tk07265 transcript:maker-scaffold144_size3...	[more]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
LSalAtl2s1110	supercontig	LSalAtl2s1110:72574..73323 +

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
ensembl	2013-09-26 .965016
Blast vs. GO	2014-04-02
TblastN vs C. finmarchicus TSA	2014-05-09
Blastp vs. self	2014-05-10
Blastp vs. SwissProt	2017-02-10
Blastp vs. Selected Arthropods	2017-02-20
Blastp vs. NR (2/2017)	2017-02-20
Blastp vs. Tigriopus kingsejongensis proteins	2018-04-18

Properties


Property Name	Value
Logic name	ensemblgenomes
Description	maker-LSalAtl2s1110-augustus-gene-0.27
Biotype	protein_coding
Evidence	IEA
Note	Hypothetical protein

Cross References

External references for this gene


Database	Accession
Ensembl Metazoa (gene)	EMLSAG00000000716 (primary cross-reference)

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
EMLSAT00000000716	EMLSAT00000000716-696563	Lepeophtheirus salmonis	mRNA

Sequences

The following sequences are available for this feature:

gene from alignment at LSalAtl2s1110:72574..73323+

gene from alignment at LSalAtl2s1110:72574..73323+

Legend: mRNA

Hold the cursor over a type above to highlight its positions in the sequence below.

>EMLSAG00000000716-683482 ID=EMLSAG00000000716-683482|Name=EMLSAG00000000716|organism=Lepeophtheirus salmonis|type=gene|length=750bp|location=Sequence derived from alignment at LSalAtl2s1110:72574..73323+ (Lepeophtheirus salmonis)
ATAAAGTCTAGTAAGAAAATATGAACAACAAAGAACTCCTAAGCACAACA
GCTTTAATCCAAATCCTTGCACGAGTCCATGGCTCTCAAAAGTGTATAAA
ATCCCTCTCAAGTATTTTTGAAGATAAATGCATACACTACAATAGTGTTG
AAGATACTGCGAGTCTCAGAGACTCCTTACTACCTTGTGAGTATTTAAAC
GTGATTAACAATGAACTAGGGATTCGTTTGAGTATGGAAGAGCTAGATGG
GATTCTACAATATCTTCCACGGAAGGATGATACGCGAGAAATACTCTTAA
AGGATTTCATGGAAATGAAGTTGATTTCCCCCCTTAGTTTTAAAGTAAGG
AAACCTCAAGTATTTTTCCATTTATATTGAACCTATTTTTACAAATTAAC
GTTATAATAATTTACACCATATAGACGATAGATCGTAATAGTGATGGATA
CCTTTCAAAAGGTGAGCTCAAATTAGCGAATAAGGATAGTAGAATGGTGG
ATATAGAAGAAGTCATGAGGGACGCAGATCTCAACATGGATAAAAGGATT
GACTATGCAGAGTATCAAATTTATACAAGTGGTGATTAAAGAACTAATAC
ACAAAAATCTTGGTTTATTTTTTGCATACAAAACATCAATGGACCAGGAC
CAAGGTTTATGATGATGTCATCGAATTGAAATAAATAACGCCTCATGTAT
GAAGGCGTATGATTATTTACTGTTTAGTATTATAAAAAATATATTGCGAA

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