EMLSAG00000000749, EMLSAG00000000749-683515 (gene) Lepeophtheirus salmonis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of EMLSAG00000000749 vs. GO
Match: - (symbol:RpS16 "Ribosomal protein S16" species:7227 "Drosophila melanogaster" [GO:0006412 "translation" evidence=ISS] [GO:0022627 "cytosolic small ribosomal subunit" evidence=ISS] [GO:0003735 "structural constituent of ribosome" evidence=ISS;IDA] [GO:0005840 "ribosome" evidence=IDA] [GO:0000022 "mitotic spindle elongation" evidence=IMP] [GO:0007052 "mitotic spindle organization" evidence=IMP] InterPro:IPR000754 InterPro:IPR020574 Pfam:PF00380 PROSITE:PS00360 EMBL:AE013599 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0000022 PDB:3J38 PDBsum:3J38 eggNOG:COG0103 PANTHER:PTHR21569 KO:K02960 OMA:NRRCEPK GeneTree:ENSGT00390000013067 CTD:6217 OrthoDB:EOG754HQW EMBL:AY070671 RefSeq:NP_611685.1 UniGene:Dm.7604 ProteinModelPortal:Q9W237 SMR:Q9W237 BioGrid:63196 MINT:MINT-900418 STRING:7227.FBpp0071766 PaxDb:Q9W237 PRIDE:Q9W237 EnsemblMetazoa:FBtr0071855 GeneID:37580 KEGG:dme:Dmel_CG4046 FlyBase:FBgn0034743 InParanoid:Q9W237 PhylomeDB:Q9W237 ChiTaRS:RPS16 GenomeRNAi:37580 NextBio:804391 PRO:PR:Q9W237 Bgee:Q9W237 Uniprot:Q9W237) HSP 1 Score: 50.447 bits (119), Expect = 1.090e-7 Identity = 21/33 (63.64%), Postives = 28/33 (84.85%), Query Frame = 0 Query: 17 KCGKGIIKVNGSPLEHVEPNVLQYKLKEPIVLV 49 K G G++KVNG PLE +EP VLQYKL+EP++L+ Sbjct: 28 KRGNGLLKVNGRPLEQIEPKVLQYKLQEPLLLL 60
BLAST of EMLSAG00000000749 vs. GO
Match: - (symbol:E1BAT6 "Uncharacterized protein" species:9913 "Bos taurus" [GO:0003735 "structural constituent of ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412 "translation" evidence=IEA] InterPro:IPR000754 InterPro:IPR020574 Pfam:PF00380 PROSITE:PS00360 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211 PANTHER:PTHR21569 OMA:HITENGR GeneTree:ENSGT00390000013067 OrthoDB:EOG754HQW TreeFam:TF300088 EMBL:DAAA02009362 Ensembl:ENSBTAT00000002015 NextBio:20870670 Uniprot:E1BAT6) HSP 1 Score: 48.521 bits (114), Expect = 4.742e-7 Identity = 23/46 (50.00%), Postives = 29/46 (63.04%), Query Frame = 0 Query: 4 FIYKIVKIITKMIKCGKGIIKVNGSPLEHVEPNVLQYKLKEPIVLV 49 F +K K G G+IKVNG PLE +EP LQYKL EP++L+ Sbjct: 13 FGHKKTATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLL 58
BLAST of EMLSAG00000000749 vs. GO
Match: - (symbol:CAGL0I00792g species:5478 "Candida glabrata" [GO:0003735 "structural constituent of ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0030686 "90S preribosome" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0000462 "maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA] InterPro:IPR000754 InterPro:IPR020574 Pfam:PF00380 PROSITE:PS00360 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 EMBL:CR380955 Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211 PANTHER:PTHR21569 KO:K02960 OMA:NRRCEPK OrthoDB:EOG7ZPNXQ RefSeq:XP_447288.1 ProteinModelPortal:Q6FR56 SMR:Q6FR56 PRIDE:Q6FR56 GeneID:2889042 KEGG:cgr:CAGL0I00792g Uniprot:Q6FR56) HSP 1 Score: 48.1358 bits (113), Expect = 5.668e-7 Identity = 20/34 (58.82%), Postives = 29/34 (85.29%), Query Frame = 0 Query: 16 IKCGKGIIKVNGSPLEHVEPNVLQYKLKEPIVLV 49 +K GKG+IKVNGSP+ VEP +L++K+ EP++LV Sbjct: 22 VKAGKGLIKVNGSPITLVEPEILRFKVYEPLLLV 55
BLAST of EMLSAG00000000749 vs. GO
Match: - (symbol:F1SEG5 "Uncharacterized protein" species:9823 "Sus scrofa" [GO:0003735 "structural constituent of ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412 "translation" evidence=IEA] InterPro:IPR000754 InterPro:IPR020574 Pfam:PF00380 PROSITE:PS00360 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211 PANTHER:PTHR21569 GeneTree:ENSGT00390000013067 TreeFam:TF300088 EMBL:FP236263 Ensembl:ENSSSCT00000011719 Uniprot:F1SEG5) HSP 1 Score: 48.1358 bits (113), Expect = 5.928e-7 Identity = 23/42 (54.76%), Postives = 29/42 (69.05%), Query Frame = 0 Query: 10 KIITKMIKC--GKGIIKVNGSPLEHVEPNVLQYKLKEPIVLV 49 K T + C G G+IKVNG PLE +EP LQYKL EP++L+ Sbjct: 17 KTATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLL 58
BLAST of EMLSAG00000000749 vs. GO
Match: - (symbol:K7GSD9 "Uncharacterized protein" species:9823 "Sus scrofa" [GO:0003735 "structural constituent of ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412 "translation" evidence=IEA] InterPro:IPR000754 InterPro:IPR020574 Pfam:PF00380 PROSITE:PS00360 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211 PANTHER:PTHR21569 GeneTree:ENSGT00390000013067 EMBL:FP236263 Ensembl:ENSSSCT00000032834 Uniprot:K7GSD9) HSP 1 Score: 48.1358 bits (113), Expect = 5.935e-7 Identity = 23/42 (54.76%), Postives = 29/42 (69.05%), Query Frame = 0 Query: 10 KIITKMIKC--GKGIIKVNGSPLEHVEPNVLQYKLKEPIVLV 49 K T + C G G+IKVNG PLE +EP LQYKL EP++L+ Sbjct: 16 KTATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLL 57
BLAST of EMLSAG00000000749 vs. GO
Match: - (symbol:RPS16B "Protein component of the small (40S) ribosomal subunit" species:559292 "Saccharomyces cerevisiae S288c" [GO:0002181 "cytoplasmic translation" evidence=NAS] [GO:0006412 "translation" evidence=IEA] [GO:0000462 "maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IGI] [GO:0005840 "ribosome" evidence=IEA] [GO:0030529 "ribonucleoprotein complex" evidence=IEA] [GO:0022627 "cytosolic small ribosomal subunit" evidence=NAS] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0003735 "structural constituent of ribosome" evidence=IEA;NAS] InterPro:IPR000754 InterPro:IPR020574 Pfam:PF00380 PROSITE:PS00360 SGD:S000002241 EMBL:BK006938 GO:GO:0003735 GO:GO:0002181 Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0000462 GO:GO:0022627 PANTHER:PTHR21569 KO:K02960 PIR:S67619 RefSeq:NP_010200.1 RefSeq:NP_013863.2 BioGrid:31978 BioGrid:35319 EnsemblFungi:YDL083C EnsemblFungi:YMR143W GeneID:851476 GeneID:855174 KEGG:sce:YDL083C KEGG:sce:YMR143W OrthoDB:EOG7ZPNXQ NextBio:968780 EMBL:Z74131 ProteinModelPortal:P0CX52 SMR:P0CX52 IntAct:P0CX52 MINT:MINT-8285669 GeneTree:ENSGT00390000013067 BioCyc:YEAST:G3O-29492-MONOMER PRO:PR:P0CX52 ArrayExpress:P0CX52 Uniprot:P0CX52) HSP 1 Score: 48.1358 bits (113), Expect = 6.188e-7 Identity = 20/34 (58.82%), Postives = 29/34 (85.29%), Query Frame = 0 Query: 16 IKCGKGIIKVNGSPLEHVEPNVLQYKLKEPIVLV 49 +K GKG+IKVNGSP+ VEP +L++K+ EP++LV Sbjct: 22 VKAGKGLIKVNGSPITLVEPEILRFKVYEPLLLV 55
BLAST of EMLSAG00000000749 vs. GO
Match: - (symbol:RPS16A "Protein component of the small (40S) ribosomal subunit" species:559292 "Saccharomyces cerevisiae S288c" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0003735 "structural constituent of ribosome" evidence=IEA;NAS] [GO:0002181 "cytoplasmic translation" evidence=NAS] [GO:0022627 "cytosolic small ribosomal subunit" evidence=NAS] [GO:0030686 "90S preribosome" evidence=IDA] [GO:0006412 "translation" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0000462 "maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IGI] [GO:0030529 "ribonucleoprotein complex" evidence=IEA] InterPro:IPR000754 InterPro:IPR020574 Pfam:PF00380 PROSITE:PS00360 SGD:S000004751 EMBL:BK006946 GO:GO:0003735 GO:GO:0002181 Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0000462 EMBL:Z47071 PDB:1S1H PDBsum:1S1H GO:GO:0022627 PDB:3IZB PDB:3O2Z PDB:3O30 PDB:3U5C PDB:3U5G PDB:4BYL PDB:4BYT PDBsum:3IZB PDBsum:3O2Z PDBsum:3O30 PDBsum:3U5C PDBsum:3U5G PDBsum:4BYL PDBsum:4BYT PANTHER:PTHR21569 PDB:1K5X PDBsum:1K5X KO:K02960 PIR:S67619 RefSeq:NP_010200.1 RefSeq:NP_013863.2 ProteinModelPortal:P0CX51 SMR:P0CX51 BioGrid:31978 BioGrid:35319 IntAct:P0CX51 MINT:MINT-8285666 EnsemblFungi:YDL083C EnsemblFungi:YMR143W GeneID:851476 GeneID:855174 KEGG:sce:YDL083C KEGG:sce:YMR143W OrthoDB:EOG7ZPNXQ BioCyc:YEAST:G3O-32835-MONOMER EvolutionaryTrace:P0CX51 NextBio:968780 ArrayExpress:P0CX51 Uniprot:P0CX51) HSP 1 Score: 48.1358 bits (113), Expect = 6.188e-7 Identity = 20/34 (58.82%), Postives = 29/34 (85.29%), Query Frame = 0 Query: 16 IKCGKGIIKVNGSPLEHVEPNVLQYKLKEPIVLV 49 +K GKG+IKVNGSP+ VEP +L++K+ EP++LV Sbjct: 22 VKAGKGLIKVNGSPITLVEPEILRFKVYEPLLLV 55
BLAST of EMLSAG00000000749 vs. GO
Match: - (symbol:RPS16 "Uncharacterized protein" species:9031 "Gallus gallus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0003735 "structural constituent of ribosome" evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0022627 "cytosolic small ribosomal subunit" evidence=IEA] [GO:0042274 "ribosomal small subunit biogenesis" evidence=IEA] InterPro:IPR000754 InterPro:IPR020574 Pfam:PF00380 PROSITE:PS00360 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211 PANTHER:PTHR21569 KO:K02960 GeneTree:ENSGT00390000013067 CTD:6217 EMBL:AADN03001056 RefSeq:XP_004937643.1 RefSeq:XP_416113.1 Ensembl:ENSGALT00000046025 GeneID:417871 KEGG:gga:417871 Uniprot:R4GGJ0) HSP 1 Score: 48.1358 bits (113), Expect = 6.933e-7 Identity = 23/42 (54.76%), Postives = 29/42 (69.05%), Query Frame = 0 Query: 10 KIITKMIKC--GKGIIKVNGSPLEHVEPNVLQYKLKEPIVLV 49 K T + C G G+IKVNG PLE +EP LQYKL EP++L+ Sbjct: 17 KTATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLL 58
BLAST of EMLSAG00000000749 vs. GO
Match: - (symbol:RPS16 "RPS16 protein" species:9606 "Homo sapiens" [GO:0003735 "structural constituent of ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412 "translation" evidence=IEA] InterPro:IPR000754 Pfam:PF00380 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211 EMBL:AC011500 PANTHER:PTHR21569 HOGENOM:HOG000019803 KO:K02960 CTD:6217 ChiTaRS:RPS16 UniGene:Hs.397609 GeneID:6217 KEGG:hsa:6217 HGNC:HGNC:10396 EMBL:BC071674 RefSeq:XP_005259194.1 Ensembl:ENST00000339471 UCSC:uc002olm.3 HOVERGEN:HBG061802 Uniprot:Q6IPX4) HSP 1 Score: 48.1358 bits (113), Expect = 6.984e-7 Identity = 23/47 (48.94%), Postives = 31/47 (65.96%), Query Frame = 0 Query: 5 IYKIVKIITKMIKC--GKGIIKVNGSPLEHVEPNVLQYKLKEPIVLV 49 ++ K T + C G G+IKVNG PLE +EP LQYKL EP++L+ Sbjct: 12 VFGRKKTATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLL 58
BLAST of EMLSAG00000000749 vs. GO
Match: - (symbol:Rps16 "40S ribosomal protein S16" species:10116 "Rattus norvegicus" [GO:0003735 "structural constituent of ribosome" evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0015935 "small ribosomal subunit" evidence=ISS] InterPro:IPR000754 InterPro:IPR020574 Pfam:PF00380 PROSITE:PS00360 RGD:621031 GO:GO:0006412 GO:GO:0003723 GO:GO:0003735 Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0022627 eggNOG:COG0103 PANTHER:PTHR21569 KO:K02960 OMA:NRRCEPK GeneTree:ENSGT00390000013067 CTD:6217 HOVERGEN:HBG055171 OrthoDB:EOG754HQW NextBio:24141 EMBL:X17665 PIR:S09041 RefSeq:NP_001162617.1 UniGene:Rn.29791 ProteinModelPortal:P62250 SMR:P62250 BioGrid:250819 IntAct:P62250 MINT:MINT-4576994 PhosphoSite:P62250 PaxDb:P62250 PRIDE:P62250 Ensembl:ENSRNOT00000026576 GeneID:140655 KEGG:rno:140655 UCSC:RGD:621031 InParanoid:P62250 PRO:PR:P62250 ArrayExpress:P62250 Genevestigator:P62250 Uniprot:P62250) HSP 1 Score: 48.1358 bits (113), Expect = 7.071e-7 Identity = 23/42 (54.76%), Postives = 29/42 (69.05%), Query Frame = 0 Query: 10 KIITKMIKC--GKGIIKVNGSPLEHVEPNVLQYKLKEPIVLV 49 K T + C G G+IKVNG PLE +EP LQYKL EP++L+ Sbjct: 17 KTATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLL 58
BLAST of EMLSAG00000000749 vs. C. finmarchicus
Match: gi|592784355|gb|GAXK01170213.1| (TSA: Calanus finmarchicus comp310_c1_seq2 transcribed RNA sequence) HSP 1 Score: 51.2174 bits (121), Expect = 2.807e-8 Identity = 23/33 (69.70%), Postives = 27/33 (81.82%), Query Frame = 0 Query: 17 KCGKGIIKVNGSPLEHVEPNVLQYKLKEPIVLV 49 K GKG+IKVNG PLE VEP L YKL+EPI+L+ Sbjct: 347 KRGKGLIKVNGRPLELVEPRALSYKLQEPILLL 445
BLAST of EMLSAG00000000749 vs. C. finmarchicus
Match: gi|592784356|gb|GAXK01170212.1| (TSA: Calanus finmarchicus comp310_c1_seq1 transcribed RNA sequence) HSP 1 Score: 51.2174 bits (121), Expect = 2.807e-8 Identity = 23/33 (69.70%), Postives = 27/33 (81.82%), Query Frame = 0 Query: 17 KCGKGIIKVNGSPLEHVEPNVLQYKLKEPIVLV 49 K GKG+IKVNG PLE VEP L YKL+EPI+L+ Sbjct: 347 KRGKGLIKVNGRPLELVEPRALSYKLQEPILLL 445
BLAST of EMLSAG00000000749 vs. C. finmarchicus
Match: gi|592869830|gb|GAXK01087732.1| (TSA: Calanus finmarchicus comp4300994_c0_seq1 transcribed RNA sequence) HSP 1 Score: 46.2098 bits (108), Expect = 1.916e-6 Identity = 21/33 (63.64%), Postives = 26/33 (78.79%), Query Frame = 0 Query: 17 KCGKGIIKVNGSPLEHVEPNVLQYKLKEPIVLV 49 K G G+IKVNG PL +EP +LQYKL EPI+L+ Sbjct: 115 KRGHGLIKVNGRPLSIIEPRLLQYKLYEPILLL 213
BLAST of EMLSAG00000000749 vs. C. finmarchicus
Match: gi|592810542|gb|GAXK01144026.1| (TSA: Calanus finmarchicus comp6494520_c0_seq1 transcribed RNA sequence) HSP 1 Score: 40.817 bits (94), Expect = 1.158e-4 Identity = 18/33 (54.55%), Postives = 25/33 (75.76%), Query Frame = 0 Query: 17 KCGKGIIKVNGSPLEHVEPNVLQYKLKEPIVLV 49 K G G+IKVNG P+E VEP +L+ K EP++L+ Sbjct: 67 KRGSGLIKVNGCPIELVEPEILRVKTFEPVLLL 165
BLAST of EMLSAG00000000749 vs. C. finmarchicus
Match: gi|592758797|gb|GAXK01195616.1| (TSA: Calanus finmarchicus comp3126592_c0_seq1 transcribed RNA sequence) HSP 1 Score: 39.6614 bits (91), Expect = 2.742e-4 Identity = 15/31 (48.39%), Postives = 25/31 (80.65%), Query Frame = 0 Query: 19 GKGIIKVNGSPLEHVEPNVLQYKLKEPIVLV 49 G+G+I+VNG PLE + P VL+ K+ EP++++ Sbjct: 70 GQGLIRVNGVPLEQIRPEVLRVKVLEPVLVL 162
BLAST of EMLSAG00000000749 vs. C. finmarchicus
Match: gi|592954720|gb|GAXK01003833.1| (TSA: Calanus finmarchicus comp2093893_c0_seq1 transcribed RNA sequence) HSP 1 Score: 35.039 bits (79), Expect = 1.826e-2 Identity = 14/34 (41.18%), Postives = 26/34 (76.47%), Query Frame = 0 Query: 16 IKCGKGIIKVNGSPLEHVEPNVLQYKLKEPIVLV 49 ++ GKG+++VNGSP++ V+P K+ EP++L+ Sbjct: 276 VRTGKGVLRVNGSPIDLVKPESY*IKILEPVLLL 377
BLAST of EMLSAG00000000749 vs. L. salmonis peptides
Match: EMLSAP00000000749 (pep:novel supercontig:LSalAtl2s:LSalAtl2s111:437363:462272:-1 gene:EMLSAG00000000749 transcript:EMLSAT00000000749 description:"snap_masked-LSalAtl2s111-processed-gene-4.3") HSP 1 Score: 221.09 bits (562), Expect = 2.299e-75 Identity = 110/110 (100.00%), Postives = 110/110 (100.00%), Query Frame = 0 Query: 1 MIEFIYKIVKIITKMIKCGKGIIKVNGSPLEHVEPNVLQYKLKEPIVLVVYKLVTTQVSNIEEDRAYAYCYINDPKIMFLLDLGSNGNILPKQYIARKSMEENTGIYLNA 110 MIEFIYKIVKIITKMIKCGKGIIKVNGSPLEHVEPNVLQYKLKEPIVLVVYKLVTTQVSNIEEDRAYAYCYINDPKIMFLLDLGSNGNILPKQYIARKSMEENTGIYLNA Sbjct: 1 MIEFIYKIVKIITKMIKCGKGIIKVNGSPLEHVEPNVLQYKLKEPIVLVVYKLVTTQVSNIEEDRAYAYCYINDPKIMFLLDLGSNGNILPKQYIARKSMEENTGIYLNA 110
BLAST of EMLSAG00000000749 vs. L. salmonis peptides
Match: EMLSAP00000008099 (pep:novel supercontig:LSalAtl2s:LSalAtl2s481:72730:74131:1 gene:EMLSAG00000008099 transcript:EMLSAT00000008099 description:"maker-LSalAtl2s481-augustus-gene-0.35") HSP 1 Score: 53.5286 bits (127), Expect = 2.531e-10 Identity = 23/33 (69.70%), Postives = 28/33 (84.85%), Query Frame = 0 Query: 17 KCGKGIIKVNGSPLEHVEPNVLQYKLKEPIVLV 49 K GKG++KVNG PLE VEP LQYKL+EPI+L+ Sbjct: 27 KRGKGLVKVNGRPLEQVEPKALQYKLQEPILLL 59
BLAST of EMLSAG00000000749 vs. SwissProt
Match: gi|54039384|sp|P62251.1|RS16_AEDAE (RecName: Full=40S ribosomal protein S16) HSP 1 Score: 50.8322 bits (120), Expect = 5.182e-8 Identity = 20/33 (60.61%), Postives = 29/33 (87.88%), Query Frame = 0 Query: 17 KCGKGIIKVNGSPLEHVEPNVLQYKLKEPIVLV 49 K GKG+++VNG PL+ +EP VLQYKL+EP++L+ Sbjct: 28 KRGKGLLRVNGRPLDQIEPKVLQYKLQEPLLLL 60
BLAST of EMLSAG00000000749 vs. SwissProt
Match: gi|54039449|sp|Q9W237.1|RS16_DROME (RecName: Full=40S ribosomal protein S16) HSP 1 Score: 50.447 bits (119), Expect = 7.645e-8 Identity = 21/33 (63.64%), Postives = 28/33 (84.85%), Query Frame = 0 Query: 17 KCGKGIIKVNGSPLEHVEPNVLQYKLKEPIVLV 49 K G G++KVNG PLE +EP VLQYKL+EP++L+ Sbjct: 28 KRGNGLLKVNGRPLEQIEPKVLQYKLQEPLLLL 60
BLAST of EMLSAG00000000749 vs. SwissProt
Match: gi|59800207|sp|Q6FR56.1|RS16_CANGA (RecName: Full=40S ribosomal protein S16) HSP 1 Score: 48.1358 bits (113), Expect = 4.395e-7 Identity = 20/34 (58.82%), Postives = 29/34 (85.29%), Query Frame = 0 Query: 16 IKCGKGIIKVNGSPLEHVEPNVLQYKLKEPIVLV 49 +K GKG+IKVNGSP+ VEP +L++K+ EP++LV Sbjct: 22 VKAGKGLIKVNGSPITLVEPEILRFKVYEPLLLV 55
BLAST of EMLSAG00000000749 vs. SwissProt
Match: gi|338819318|sp|P0CX51.1|RS16A_YEAST (RecName: Full=40S ribosomal protein S16-A; AltName: Full=RP61R >gi|338819319|sp|P0CX52.1|RS16B_YEAST RecName: Full=40S ribosomal protein S16-B; AltName: Full=RP61R) HSP 1 Score: 48.1358 bits (113), Expect = 4.830e-7 Identity = 20/34 (58.82%), Postives = 29/34 (85.29%), Query Frame = 0 Query: 16 IKCGKGIIKVNGSPLEHVEPNVLQYKLKEPIVLV 49 +K GKG+IKVNGSP+ VEP +L++K+ EP++LV Sbjct: 22 VKAGKGLIKVNGSPITLVEPEILRFKVYEPLLLV 55
BLAST of EMLSAG00000000749 vs. SwissProt
Match: gi|50403607|sp|P62249.2|RS16_HUMAN (RecName: Full=40S ribosomal protein S16 >gi|54039370|sp|P62250.2|RS16_RAT RecName: Full=40S ribosomal protein S16 >gi|54039372|sp|P14131.4|RS16_MOUSE RecName: Full=40S ribosomal protein S16 >gi|60394813|sp|Q29201.4|RS16_PIG RecName: Full=40S ribosomal protein S16 >gi|108860953|sp|Q3T0X6.3|RS16_BOVIN RecName: Full=40S ribosomal protein S16) HSP 1 Score: 48.1358 bits (113), Expect = 5.670e-7 Identity = 23/42 (54.76%), Postives = 29/42 (69.05%), Query Frame = 0 Query: 10 KIITKMIKC--GKGIIKVNGSPLEHVEPNVLQYKLKEPIVLV 49 K T + C G G+IKVNG PLE +EP LQYKL EP++L+ Sbjct: 17 KTATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLL 58
BLAST of EMLSAG00000000749 vs. SwissProt
Match: gi|2500429|sp|Q22054.3|RS16_CAEEL (RecName: Full=40S ribosomal protein S16) HSP 1 Score: 47.7506 bits (112), Expect = 6.240e-7 Identity = 22/42 (52.38%), Postives = 31/42 (73.81%), Query Frame = 0 Query: 10 KIITKMIKC--GKGIIKVNGSPLEHVEPNVLQYKLKEPIVLV 49 K T + C G+G+IKVNG PLE +EP +L+ KL+EP++LV Sbjct: 15 KTATAVAHCKKGQGLIKVNGRPLEFLEPQILRIKLQEPLLLV 56
BLAST of EMLSAG00000000749 vs. SwissProt
Match: gi|54039445|sp|Q90YQ7.1|RS16_ICTPU (RecName: Full=40S ribosomal protein S16) HSP 1 Score: 47.7506 bits (112), Expect = 7.138e-7 Identity = 23/42 (54.76%), Postives = 29/42 (69.05%), Query Frame = 0 Query: 10 KIITKMIKC--GKGIIKVNGSPLEHVEPNVLQYKLKEPIVLV 49 K T + C G G+IKVNG PLE +EP LQYKL EP++L+ Sbjct: 17 KTATAVAHCKRGNGLIKVNGRPLETIEPATLQYKLLEPVLLL 58
BLAST of EMLSAG00000000749 vs. SwissProt
Match: gi|54039448|sp|Q98TR7.1|RS16_HETFO (RecName: Full=40S ribosomal protein S16) HSP 1 Score: 47.7506 bits (112), Expect = 7.138e-7 Identity = 23/42 (54.76%), Postives = 29/42 (69.05%), Query Frame = 0 Query: 10 KIITKMIKC--GKGIIKVNGSPLEHVEPNVLQYKLKEPIVLV 49 K T + C G G+IKVNG PLE +EP LQYKL EP++L+ Sbjct: 17 KTATAVAHCKRGNGLIKVNGRPLETIEPATLQYKLLEPVLLL 58
BLAST of EMLSAG00000000749 vs. SwissProt
Match: gi|54039446|sp|Q95V31.1|RS16_SPOFR (RecName: Full=40S ribosomal protein S16) HSP 1 Score: 47.7506 bits (112), Expect = 7.914e-7 Identity = 20/33 (60.61%), Postives = 28/33 (84.85%), Query Frame = 0 Query: 17 KCGKGIIKVNGSPLEHVEPNVLQYKLKEPIVLV 49 K G G+++VNG PL+ VEP +LQYKL+EPI+L+ Sbjct: 31 KRGHGVLRVNGRPLDLVEPRLLQYKLQEPILLL 63
BLAST of EMLSAG00000000749 vs. Select Arthropod Genomes
Match: AHN56526.1 (ribosomal protein S16, isoform B [Drosophila melanogaster]) HSP 1 Score: 50.447 bits (119), Expect = 3.705e-8 Identity = 21/33 (63.64%), Postives = 28/33 (84.85%), Query Frame = 0 Query: 17 KCGKGIIKVNGSPLEHVEPNVLQYKLKEPIVLV 49 K G G++KVNG PLE +EP VLQYKL+EP++L+ Sbjct: 28 KRGNGLLKVNGRPLEQIEPKVLQYKLQEPLLLL 60
BLAST of EMLSAG00000000749 vs. Select Arthropod Genomes
Match: AAF46862.1 (ribosomal protein S16, isoform A [Drosophila melanogaster]) HSP 1 Score: 50.447 bits (119), Expect = 3.705e-8 Identity = 21/33 (63.64%), Postives = 28/33 (84.85%), Query Frame = 0 Query: 17 KCGKGIIKVNGSPLEHVEPNVLQYKLKEPIVLV 49 K G G++KVNG PLE +EP VLQYKL+EP++L+ Sbjct: 28 KRGNGLLKVNGRPLEQIEPKVLQYKLQEPLLLL 60
BLAST of EMLSAG00000000749 vs. Select Arthropod Genomes
Match: XP_001122174.1 (PREDICTED: 40S ribosomal protein S16 [Apis mellifera]) HSP 1 Score: 48.9062 bits (115), Expect = 1.187e-7 Identity = 22/33 (66.67%), Postives = 28/33 (84.85%), Query Frame = 0 Query: 17 KCGKGIIKVNGSPLEHVEPNVLQYKLKEPIVLV 49 K G+G ++VNG PLE VEP VLQYKL+EPI+L+ Sbjct: 28 KRGRGNLRVNGRPLELVEPRVLQYKLQEPILLL 60
BLAST of EMLSAG00000000749 vs. Select Arthropod Genomes
Match: EAA43797.2 (AGAP011424-PA, partial [Anopheles gambiae str. PEST]) HSP 1 Score: 48.521 bits (114), Expect = 1.677e-7 Identity = 19/42 (45.24%), Postives = 32/42 (76.19%), Query Frame = 0 Query: 10 KIITKMIKC--GKGIIKVNGSPLEHVEPNVLQYKLKEPIVLV 49 K T + C GKG++++NG PL+ +EP +L+YKL+EP++L+ Sbjct: 19 KTATAVAHCKRGKGLLRINGRPLDQIEPKILRYKLQEPLLLL 60
BLAST of EMLSAG00000000749 vs. Select Arthropod Genomes
Match: EEB11520.1 (40S ribosomal protein S16, putative [Pediculus humanus corporis]) HSP 1 Score: 47.3654 bits (111), Expect = 4.891e-7 Identity = 20/33 (60.61%), Postives = 27/33 (81.82%), Query Frame = 0 Query: 17 KCGKGIIKVNGSPLEHVEPNVLQYKLKEPIVLV 49 K GKG I+VNG PL+ +EP +LQYKL+EP +L+ Sbjct: 29 KRGKGNIRVNGRPLDMIEPRILQYKLQEPFLLL 61
BLAST of EMLSAG00000000749 vs. Select Arthropod Genomes
Match: gb|EEZ98753.1| (40S ribosomal protein S16-like Protein [Tribolium castaneum]) HSP 1 Score: 47.3654 bits (111), Expect = 5.901e-7 Identity = 21/33 (63.64%), Postives = 27/33 (81.82%), Query Frame = 0 Query: 17 KCGKGIIKVNGSPLEHVEPNVLQYKLKEPIVLV 49 K GKGI++VNG PL VEP +LQ KL+EPI+L+ Sbjct: 32 KRGKGILRVNGRPLSQVEPKMLQDKLQEPILLL 64
BLAST of EMLSAG00000000749 vs. nr
Match: gi|1108477083|emb|CRK95108.1| (CLUMA_CG008586, isoform A [Clunio marinus]) HSP 1 Score: 53.9138 bits (128), Expect = 9.291e-7 Identity = 23/46 (50.00%), Postives = 33/46 (71.74%), Query Frame = 0 Query: 4 FIYKIVKIITKMIKCGKGIIKVNGSPLEHVEPNVLQYKLKEPIVLV 49 F K I T K G+G+++VNG PLE +EP +LQYKL+EP++L+ Sbjct: 22 FGRKKTAIATAYCKRGRGLLRVNGRPLEQIEPKILQYKLQEPLLLL 67
BLAST of EMLSAG00000000749 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold272_size230267-snap-gene-0.18 (protein:Tk00250 transcript:maker-scaffold272_size230267-snap-gene-0.18-mRNA-1 annotation:"40s ribosomal protein s16-like") HSP 1 Score: 54.299 bits (129), Expect = 8.278e-11 Identity = 23/33 (69.70%), Postives = 28/33 (84.85%), Query Frame = 0 Query: 17 KCGKGIIKVNGSPLEHVEPNVLQYKLKEPIVLV 49 K GKG++KVNG PLE VEP LQYKL+EPI+L+ Sbjct: 27 KRGKGLVKVNGRPLEQVEPKALQYKLQEPILLL 59 The following BLAST results are available for this feature:
BLAST of EMLSAG00000000749 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO) Total hits: 25
Pagesback to top
BLAST of EMLSAG00000000749 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA) Total hits: 6
BLAST of EMLSAG00000000749 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self) Total hits: 2
BLAST of EMLSAG00000000749 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt) Total hits: 9
BLAST of EMLSAG00000000749 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods) Total hits: 6
BLAST of EMLSAG00000000749 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017)) Total hits: 1
BLAST of EMLSAG00000000749 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins) Total hits: 1
Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Cross References
External references for this gene
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at LSalAtl2s111:437363..462272- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>EMLSAG00000000749-683515 ID=EMLSAG00000000749-683515|Name=EMLSAG00000000749|organism=Lepeophtheirus salmonis|type=gene|length=24910bp|location=Sequence derived from alignment at LSalAtl2s111:437363..462272- (Lepeophtheirus salmonis)back to top Add to Basket
|