EMLSAG00000000749, EMLSAG00000000749-683515 (gene) Lepeophtheirus salmonis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of EMLSAG00000000749 vs. GO
Match: - (symbol:Rps16 "ribosomal protein S16" species:10116 "Rattus norvegicus" [GO:0003674 "molecular_function" evidence=ND] [GO:0003723 "RNA binding" evidence=IEA;ISO] [GO:0003735 "structural constituent of ribosome" evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA;ISO] [GO:0006412 "translation" evidence=IEA] [GO:0008150 "biological_process" evidence=ND] [GO:0015935 "small ribosomal subunit" evidence=ISO;ISS] [GO:0022627 "cytosolic small ribosomal subunit" evidence=ISO;IDA] [GO:0042274 "ribosomal small subunit biogenesis" evidence=IEA;ISO] [GO:0044822 "poly(A) RNA binding" evidence=ISO] [GO:0070062 "extracellular vesicular exosome" evidence=ISO] InterPro:IPR000754 InterPro:IPR020574 Pfam:PF00380 PROSITE:PS00360 RGD:621031 GO:GO:0006412 GO:GO:0003723 GO:GO:0003735 Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0022627 eggNOG:COG0103 PANTHER:PTHR21569 KO:K02960 OMA:NRRCEPK GeneTree:ENSGT00390000013067 CTD:6217 HOVERGEN:HBG055171 OrthoDB:EOG754HQW NextBio:24141 EMBL:X17665 PIR:S09041 RefSeq:NP_001162617.1 UniGene:Rn.29791 ProteinModelPortal:P62250 SMR:P62250 BioGrid:250819 IntAct:P62250 MINT:MINT-4576994 PhosphoSite:P62250 PaxDb:P62250 PRIDE:P62250 Ensembl:ENSRNOT00000026576 GeneID:140655 KEGG:rno:140655 UCSC:RGD:621031 InParanoid:P62250 PRO:PR:P62250 ArrayExpress:P62250 Genevestigator:P62250 Uniprot:P62250) HSP 1 Score: 48.1358 bits (113), Expect = 7.071e-7 Identity = 23/42 (54.76%), Postives = 29/42 (69.05%), Query Frame = 0 Query: 10 KIITKMIKC--GKGIIKVNGSPLEHVEPNVLQYKLKEPIVLV 49 K T + C G G+IKVNG PLE +EP LQYKL EP++L+ Sbjct: 17 KTATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLL 58
BLAST of EMLSAG00000000749 vs. GO
Match: - (symbol:Rps16 "ribosomal protein S16" species:10090 "Mus musculus" [GO:0003723 "RNA binding" evidence=ISO] [GO:0003735 "structural constituent of ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0006364 "rRNA processing" evidence=ISO] [GO:0006412 "translation" evidence=IEA] [GO:0015935 "small ribosomal subunit" evidence=ISO] [GO:0022627 "cytosolic small ribosomal subunit" evidence=ISO] [GO:0030529 "ribonucleoprotein complex" evidence=IEA] [GO:0042274 "ribosomal small subunit biogenesis" evidence=ISO] [GO:0044822 "poly(A) RNA binding" evidence=ISO] [GO:0070062 "extracellular vesicular exosome" evidence=ISO] InterPro:IPR000754 InterPro:IPR020574 Pfam:PF00380 PROSITE:PS00360 MGI:MGI:98118 GO:GO:0006412 GO:GO:0003723 GO:GO:0003735 Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0006364 GO:GO:0042274 GO:GO:0022627 GO:GO:0015935 eggNOG:COG0103 PANTHER:PTHR21569 KO:K02960 OMA:NRRCEPK GeneTree:ENSGT00390000013067 CTD:6217 HOVERGEN:HBG055171 OrthoDB:EOG754HQW TreeFam:TF300088 EMBL:M11408 EMBL:AK010613 EMBL:AK010641 EMBL:AK011060 EMBL:AK019400 EMBL:AK083946 EMBL:AK088413 EMBL:AK088716 EMBL:AK150808 EMBL:AK168207 EMBL:AK169328 PIR:S11623 RefSeq:NP_038675.2 UniGene:Mm.702 ProteinModelPortal:P14131 SMR:P14131 BioGrid:203004 IntAct:P14131 MINT:MINT-1856568 PhosphoSite:P14131 PaxDb:P14131 PRIDE:P14131 Ensembl:ENSMUST00000082134 GeneID:20055 KEGG:mmu:20055 UCSC:uc012fgr.1 InParanoid:P14131 NextBio:297567 PRO:PR:P14131 ArrayExpress:P14131 Bgee:P14131 CleanEx:MM_RPS16 Genevestigator:P14131 Uniprot:P14131) HSP 1 Score: 48.1358 bits (113), Expect = 7.071e-7 Identity = 23/42 (54.76%), Postives = 29/42 (69.05%), Query Frame = 0 Query: 10 KIITKMIKC--GKGIIKVNGSPLEHVEPNVLQYKLKEPIVLV 49 K T + C G G+IKVNG PLE +EP LQYKL EP++L+ Sbjct: 17 KTATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLL 58
BLAST of EMLSAG00000000749 vs. GO
Match: - (symbol:RPS16 "40S ribosomal protein S16" species:9823 "Sus scrofa" [GO:0003723 "RNA binding" evidence=IEA] [GO:0003735 "structural constituent of ribosome" evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0015935 "small ribosomal subunit" evidence=ISS] [GO:0022627 "cytosolic small ribosomal subunit" evidence=IEA] [GO:0042274 "ribosomal small subunit biogenesis" evidence=IEA] InterPro:IPR000754 InterPro:IPR020574 Pfam:PF00380 PROSITE:PS00360 GO:GO:0006412 GO:GO:0003723 GO:GO:0003735 Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0006364 GO:GO:0042274 GO:GO:0022627 GO:GO:0015935 eggNOG:COG0103 PANTHER:PTHR21569 HOGENOM:HOG000019803 KO:K02960 OMA:NRRCEPK GeneTree:ENSGT00390000013067 CTD:6217 HOVERGEN:HBG055171 OrthoDB:EOG754HQW TreeFam:TF300088 EMBL:F14526 EMBL:AY550068 RefSeq:NP_001131092.1 RefSeq:XP_003355952.1 UniGene:Ssc.16651 ProteinModelPortal:Q29201 SMR:Q29201 PaxDb:Q29201 PRIDE:Q29201 Ensembl:ENSSSCT00000024602 GeneID:100623279 GeneID:414397 KEGG:ssc:100623279 KEGG:ssc:414397 ArrayExpress:Q29201 Uniprot:Q29201) HSP 1 Score: 48.1358 bits (113), Expect = 7.071e-7 Identity = 23/42 (54.76%), Postives = 29/42 (69.05%), Query Frame = 0 Query: 10 KIITKMIKC--GKGIIKVNGSPLEHVEPNVLQYKLKEPIVLV 49 K T + C G G+IKVNG PLE +EP LQYKL EP++L+ Sbjct: 17 KTATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLL 58
BLAST of EMLSAG00000000749 vs. GO
Match: - (symbol:RPS16 "40S ribosomal protein S16" species:9606 "Homo sapiens" [GO:0000184 "nuclear-transcribed mRNA catabolic process, nonsense-mediated decay" evidence=TAS] [GO:0003723 "RNA binding" evidence=IDA] [GO:0003735 "structural constituent of ribosome" evidence=IEA] [GO:0005829 "cytosol" evidence=TAS] [GO:0006364 "rRNA processing" evidence=IMP] [GO:0006412 "translation" evidence=IC;NAS;TAS] [GO:0006413 "translational initiation" evidence=TAS] [GO:0006414 "translational elongation" evidence=TAS] [GO:0006415 "translational termination" evidence=TAS] [GO:0006614 "SRP-dependent cotranslational protein targeting to membrane" evidence=TAS] [GO:0010467 "gene expression" evidence=TAS] [GO:0015935 "small ribosomal subunit" evidence=IDA] [GO:0016032 "viral process" evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS] [GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0019058 "viral life cycle" evidence=TAS] [GO:0019083 "viral transcription" evidence=TAS] [GO:0022627 "cytosolic small ribosomal subunit" evidence=NAS;IDA] [GO:0042274 "ribosomal small subunit biogenesis" evidence=IMP] [GO:0044267 "cellular protein metabolic process" evidence=TAS] [GO:0044822 "poly(A) RNA binding" evidence=IDA] [GO:0070062 "extracellular vesicular exosome" evidence=IDA] Reactome:REACT_71 Reactome:REACT_21257 Reactome:REACT_17015 InterPro:IPR000754 InterPro:IPR020574 Pfam:PF00380 PROSITE:PS00360 GO:GO:0070062 Reactome:REACT_116125 GO:GO:0000184 GO:GO:0006413 EMBL:CH471126 GO:GO:0003723 GO:GO:0003735 Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0006364 GO:GO:0042274 GO:GO:0006415 GO:GO:0006414 PDB:3J3A PDBsum:3J3A GO:GO:0022627 Reactome:REACT_1762 GO:GO:0006614 GO:GO:0019083 eggNOG:COG0103 PANTHER:PTHR21569 HOGENOM:HOG000019803 KO:K02960 OMA:NRRCEPK CTD:6217 HOVERGEN:HBG055171 TreeFam:TF300088 ChiTaRS:RPS16 EMBL:M60854 EMBL:AB061841 EMBL:AK315498 EMBL:BC004324 EMBL:BC007977 PIR:A39760 RefSeq:NP_001011.1 UniGene:Hs.397609 ProteinModelPortal:P62249 SMR:P62249 BioGrid:112131 IntAct:P62249 MINT:MINT-5001167 STRING:9606.ENSP00000251453 PhosphoSite:P62249 DMDM:50403607 PaxDb:P62249 PeptideAtlas:P62249 PRIDE:P62249 DNASU:6217 Ensembl:ENST00000251453 GeneID:6217 KEGG:hsa:6217 UCSC:uc002olk.3 GeneCards:GC19M039923 H-InvDB:HIX0212796 HGNC:HGNC:10396 HPA:HPA064222 MIM:603675 neXtProt:NX_P62249 PharmGKB:PA34796 GeneWiki:RPS16 GenomeRNAi:6217 NextBio:24141 PRO:PR:P62249 ArrayExpress:P62249 Bgee:P62249 CleanEx:HS_RPS16 Genevestigator:P62249 Uniprot:P62249) HSP 1 Score: 48.1358 bits (113), Expect = 7.071e-7 Identity = 23/42 (54.76%), Postives = 29/42 (69.05%), Query Frame = 0 Query: 10 KIITKMIKC--GKGIIKVNGSPLEHVEPNVLQYKLKEPIVLV 49 K T + C G G+IKVNG PLE +EP LQYKL EP++L+ Sbjct: 17 KTATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLL 58
BLAST of EMLSAG00000000749 vs. GO
Match: - (symbol:RPS16 "40S ribosomal protein S16" species:9913 "Bos taurus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0003735 "structural constituent of ribosome" evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0022627 "cytosolic small ribosomal subunit" evidence=IEA] [GO:0042274 "ribosomal small subunit biogenesis" evidence=IEA] InterPro:IPR000754 InterPro:IPR020574 Pfam:PF00380 PROSITE:PS00360 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211 eggNOG:COG0103 PANTHER:PTHR21569 HOGENOM:HOG000019803 KO:K02960 OMA:NRRCEPK GeneTree:ENSGT00390000013067 EMBL:BC102215 RefSeq:NP_001028796.1 UniGene:Bt.59450 ProteinModelPortal:Q3T0X6 SMR:Q3T0X6 STRING:9913.ENSBTAP00000028093 PaxDb:Q3T0X6 PRIDE:Q3T0X6 Ensembl:ENSBTAT00000028093 GeneID:506297 KEGG:bta:506297 CTD:6217 HOVERGEN:HBG055171 InParanoid:Q3T0X6 OrthoDB:EOG754HQW TreeFam:TF300088 NextBio:20867545 Uniprot:Q3T0X6) HSP 1 Score: 48.1358 bits (113), Expect = 7.071e-7 Identity = 23/42 (54.76%), Postives = 29/42 (69.05%), Query Frame = 0 Query: 10 KIITKMIKC--GKGIIKVNGSPLEHVEPNVLQYKLKEPIVLV 49 K T + C G G+IKVNG PLE +EP LQYKL EP++L+ Sbjct: 17 KTATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLL 58
BLAST of EMLSAG00000000749 vs. GO
Match: - (symbol:RPS16 "40S ribosomal protein S16" species:9606 "Homo sapiens" [GO:0003735 "structural constituent of ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412 "translation" evidence=IEA] InterPro:IPR000754 InterPro:IPR020574 Pfam:PF00380 PROSITE:PS00360 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211 EMBL:AC011500 PANTHER:PTHR21569 KO:K02960 CTD:6217 OrthoDB:EOG754HQW UniGene:Hs.397609 GeneID:6217 KEGG:hsa:6217 HGNC:HGNC:10396 RefSeq:XP_005259197.1 ProteinModelPortal:M0R3H0 SMR:M0R3H0 Ensembl:ENST00000599539 ArrayExpress:M0R3H0 Uniprot:M0R3H0) HSP 1 Score: 47.7506 bits (112), Expect = 7.078e-7 Identity = 23/42 (54.76%), Postives = 29/42 (69.05%), Query Frame = 0 Query: 10 KIITKMIKC--GKGIIKVNGSPLEHVEPNVLQYKLKEPIVLV 49 K T + C G G+IKVNG PLE +EP LQYKL EP++L+ Sbjct: 17 KTATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLL 58
BLAST of EMLSAG00000000749 vs. GO
Match: - (symbol:RPS16 "Uncharacterized protein" species:9615 "Canis lupus familiaris" [GO:0003723 "RNA binding" evidence=IEA] [GO:0003735 "structural constituent of ribosome" evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0022627 "cytosolic small ribosomal subunit" evidence=IEA] [GO:0042274 "ribosomal small subunit biogenesis" evidence=IEA] InterPro:IPR000754 InterPro:IPR020574 Pfam:PF00380 PROSITE:PS00360 GO:GO:0006412 GO:GO:0003723 GO:GO:0003735 Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0006364 GO:GO:0042274 GO:GO:0022627 PANTHER:PTHR21569 PDB:2ZKQ PDBsum:2ZKQ OMA:NRRCEPK GeneTree:ENSGT00390000013067 OrthoDB:EOG754HQW TreeFam:TF300088 EMBL:AAEX03000956 ProteinModelPortal:F1PKR6 Ensembl:ENSCAFT00000008872 Uniprot:F1PKR6) HSP 1 Score: 48.1358 bits (113), Expect = 7.234e-7 Identity = 23/42 (54.76%), Postives = 29/42 (69.05%), Query Frame = 0 Query: 10 KIITKMIKC--GKGIIKVNGSPLEHVEPNVLQYKLKEPIVLV 49 K T + C G G+IKVNG PLE +EP LQYKL EP++L+ Sbjct: 31 KTATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLL 72
BLAST of EMLSAG00000000749 vs. GO
Match: - (symbol:F1SP46 "Uncharacterized protein" species:9823 "Sus scrofa" [GO:0003735 "structural constituent of ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412 "translation" evidence=IEA] InterPro:IPR000754 InterPro:IPR020574 Pfam:PF00380 PROSITE:PS00360 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211 PANTHER:PTHR21569 GeneTree:ENSGT00390000013067 OrthoDB:EOG754HQW TreeFam:TF300088 EMBL:CU062655 RefSeq:XP_005660372.1 Ensembl:ENSSSCT00000005976 GeneID:100154893 OMA:PRPCESK Uniprot:F1SP46) HSP 1 Score: 48.1358 bits (113), Expect = 7.499e-7 Identity = 23/42 (54.76%), Postives = 29/42 (69.05%), Query Frame = 0 Query: 10 KIITKMIKC--GKGIIKVNGSPLEHVEPNVLQYKLKEPIVLV 49 K T + C G G+IKVNG PLE +EP LQYKL EP++L+ Sbjct: 17 KTATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLL 58
BLAST of EMLSAG00000000749 vs. GO
Match: - (symbol:rps-16 species:6239 "Caenorhabditis elegans" [GO:0000003 "reproduction" evidence=IMP] [GO:0002119 "nematode larval development" evidence=IMP] [GO:0009792 "embryo development ending in birth or egg hatching" evidence=IMP] [GO:0018996 "molting cycle, collagen and cuticulin-based cuticle" evidence=IMP] [GO:0006915 "apoptotic process" evidence=IMP] InterPro:IPR000754 InterPro:IPR020574 Pfam:PF00380 PROSITE:PS00360 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211 EMBL:Z78413 eggNOG:COG0103 PANTHER:PTHR21569 HOGENOM:HOG000019803 KO:K02960 OMA:NRRCEPK GeneTree:ENSGT00390000013067 PIR:T24280 RefSeq:NP_506690.1 UniGene:Cel.23499 ProteinModelPortal:Q22054 SMR:Q22054 BioGrid:44994 IntAct:Q22054 STRING:6239.T01C3.6.2 PaxDb:Q22054 PRIDE:Q22054 EnsemblMetazoa:T01C3.6.1 EnsemblMetazoa:T01C3.6.2 GeneID:179998 KEGG:cel:CELE_T01C3.6 UCSC:T01C3.6.2 CTD:179998 WormBase:T01C3.6 InParanoid:Q22054 NextBio:907694 PRO:PR:Q22054 Uniprot:Q22054) HSP 1 Score: 47.7506 bits (112), Expect = 7.813e-7 Identity = 22/42 (52.38%), Postives = 31/42 (73.81%), Query Frame = 0 Query: 10 KIITKMIKC--GKGIIKVNGSPLEHVEPNVLQYKLKEPIVLV 49 K T + C G+G+IKVNG PLE +EP +L+ KL+EP++LV Sbjct: 15 KTATAVAHCKKGQGLIKVNGRPLEFLEPQILRIKLQEPLLLV 56
BLAST of EMLSAG00000000749 vs. GO
Match: - (symbol:rps-16 "40S ribosomal protein S16" species:6239 "Caenorhabditis elegans" [GO:0003735 "structural constituent of ribosome" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0030529 "ribonucleoprotein complex" evidence=IEA] InterPro:IPR000754 InterPro:IPR020574 Pfam:PF00380 PROSITE:PS00360 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211 EMBL:Z78413 eggNOG:COG0103 PANTHER:PTHR21569 HOGENOM:HOG000019803 KO:K02960 OMA:NRRCEPK GeneTree:ENSGT00390000013067 PIR:T24280 RefSeq:NP_506690.1 UniGene:Cel.23499 ProteinModelPortal:Q22054 SMR:Q22054 BioGrid:44994 IntAct:Q22054 STRING:6239.T01C3.6.2 PaxDb:Q22054 PRIDE:Q22054 EnsemblMetazoa:T01C3.6.1 EnsemblMetazoa:T01C3.6.2 GeneID:179998 KEGG:cel:CELE_T01C3.6 UCSC:T01C3.6.2 CTD:179998 WormBase:T01C3.6 InParanoid:Q22054 NextBio:907694 PRO:PR:Q22054 Uniprot:Q22054) HSP 1 Score: 47.7506 bits (112), Expect = 7.813e-7 Identity = 22/42 (52.38%), Postives = 31/42 (73.81%), Query Frame = 0 Query: 10 KIITKMIKC--GKGIIKVNGSPLEHVEPNVLQYKLKEPIVLV 49 K T + C G+G+IKVNG PLE +EP +L+ KL+EP++LV Sbjct: 15 KTATAVAHCKKGQGLIKVNGRPLEFLEPQILRIKLQEPLLLV 56
BLAST of EMLSAG00000000749 vs. C. finmarchicus
Match: gi|592784355|gb|GAXK01170213.1| (TSA: Calanus finmarchicus comp310_c1_seq2 transcribed RNA sequence) HSP 1 Score: 51.2174 bits (121), Expect = 2.807e-8 Identity = 23/33 (69.70%), Postives = 27/33 (81.82%), Query Frame = 0 Query: 17 KCGKGIIKVNGSPLEHVEPNVLQYKLKEPIVLV 49 K GKG+IKVNG PLE VEP L YKL+EPI+L+ Sbjct: 347 KRGKGLIKVNGRPLELVEPRALSYKLQEPILLL 445
BLAST of EMLSAG00000000749 vs. C. finmarchicus
Match: gi|592784356|gb|GAXK01170212.1| (TSA: Calanus finmarchicus comp310_c1_seq1 transcribed RNA sequence) HSP 1 Score: 51.2174 bits (121), Expect = 2.807e-8 Identity = 23/33 (69.70%), Postives = 27/33 (81.82%), Query Frame = 0 Query: 17 KCGKGIIKVNGSPLEHVEPNVLQYKLKEPIVLV 49 K GKG+IKVNG PLE VEP L YKL+EPI+L+ Sbjct: 347 KRGKGLIKVNGRPLELVEPRALSYKLQEPILLL 445
BLAST of EMLSAG00000000749 vs. C. finmarchicus
Match: gi|592869830|gb|GAXK01087732.1| (TSA: Calanus finmarchicus comp4300994_c0_seq1 transcribed RNA sequence) HSP 1 Score: 46.2098 bits (108), Expect = 1.916e-6 Identity = 21/33 (63.64%), Postives = 26/33 (78.79%), Query Frame = 0 Query: 17 KCGKGIIKVNGSPLEHVEPNVLQYKLKEPIVLV 49 K G G+IKVNG PL +EP +LQYKL EPI+L+ Sbjct: 115 KRGHGLIKVNGRPLSIIEPRLLQYKLYEPILLL 213
BLAST of EMLSAG00000000749 vs. C. finmarchicus
Match: gi|592810542|gb|GAXK01144026.1| (TSA: Calanus finmarchicus comp6494520_c0_seq1 transcribed RNA sequence) HSP 1 Score: 40.817 bits (94), Expect = 1.158e-4 Identity = 18/33 (54.55%), Postives = 25/33 (75.76%), Query Frame = 0 Query: 17 KCGKGIIKVNGSPLEHVEPNVLQYKLKEPIVLV 49 K G G+IKVNG P+E VEP +L+ K EP++L+ Sbjct: 67 KRGSGLIKVNGCPIELVEPEILRVKTFEPVLLL 165
BLAST of EMLSAG00000000749 vs. C. finmarchicus
Match: gi|592758797|gb|GAXK01195616.1| (TSA: Calanus finmarchicus comp3126592_c0_seq1 transcribed RNA sequence) HSP 1 Score: 39.6614 bits (91), Expect = 2.742e-4 Identity = 15/31 (48.39%), Postives = 25/31 (80.65%), Query Frame = 0 Query: 19 GKGIIKVNGSPLEHVEPNVLQYKLKEPIVLV 49 G+G+I+VNG PLE + P VL+ K+ EP++++ Sbjct: 70 GQGLIRVNGVPLEQIRPEVLRVKVLEPVLVL 162
BLAST of EMLSAG00000000749 vs. C. finmarchicus
Match: gi|592954720|gb|GAXK01003833.1| (TSA: Calanus finmarchicus comp2093893_c0_seq1 transcribed RNA sequence) HSP 1 Score: 35.039 bits (79), Expect = 1.826e-2 Identity = 14/34 (41.18%), Postives = 26/34 (76.47%), Query Frame = 0 Query: 16 IKCGKGIIKVNGSPLEHVEPNVLQYKLKEPIVLV 49 ++ GKG+++VNGSP++ V+P K+ EP++L+ Sbjct: 276 VRTGKGVLRVNGSPIDLVKPESY*IKILEPVLLL 377
BLAST of EMLSAG00000000749 vs. L. salmonis peptides
Match: EMLSAP00000000749 (pep:novel supercontig:LSalAtl2s:LSalAtl2s111:437363:462272:-1 gene:EMLSAG00000000749 transcript:EMLSAT00000000749 description:"snap_masked-LSalAtl2s111-processed-gene-4.3") HSP 1 Score: 221.09 bits (562), Expect = 2.299e-75 Identity = 110/110 (100.00%), Postives = 110/110 (100.00%), Query Frame = 0 Query: 1 MIEFIYKIVKIITKMIKCGKGIIKVNGSPLEHVEPNVLQYKLKEPIVLVVYKLVTTQVSNIEEDRAYAYCYINDPKIMFLLDLGSNGNILPKQYIARKSMEENTGIYLNA 110 MIEFIYKIVKIITKMIKCGKGIIKVNGSPLEHVEPNVLQYKLKEPIVLVVYKLVTTQVSNIEEDRAYAYCYINDPKIMFLLDLGSNGNILPKQYIARKSMEENTGIYLNA Sbjct: 1 MIEFIYKIVKIITKMIKCGKGIIKVNGSPLEHVEPNVLQYKLKEPIVLVVYKLVTTQVSNIEEDRAYAYCYINDPKIMFLLDLGSNGNILPKQYIARKSMEENTGIYLNA 110
BLAST of EMLSAG00000000749 vs. L. salmonis peptides
Match: EMLSAP00000008099 (pep:novel supercontig:LSalAtl2s:LSalAtl2s481:72730:74131:1 gene:EMLSAG00000008099 transcript:EMLSAT00000008099 description:"maker-LSalAtl2s481-augustus-gene-0.35") HSP 1 Score: 53.5286 bits (127), Expect = 2.531e-10 Identity = 23/33 (69.70%), Postives = 28/33 (84.85%), Query Frame = 0 Query: 17 KCGKGIIKVNGSPLEHVEPNVLQYKLKEPIVLV 49 K GKG++KVNG PLE VEP LQYKL+EPI+L+ Sbjct: 27 KRGKGLVKVNGRPLEQVEPKALQYKLQEPILLL 59
BLAST of EMLSAG00000000749 vs. SwissProt
Match: gi|54039384|sp|P62251.1|RS16_AEDAE (RecName: Full=40S ribosomal protein S16) HSP 1 Score: 50.8322 bits (120), Expect = 5.182e-8 Identity = 20/33 (60.61%), Postives = 29/33 (87.88%), Query Frame = 0 Query: 17 KCGKGIIKVNGSPLEHVEPNVLQYKLKEPIVLV 49 K GKG+++VNG PL+ +EP VLQYKL+EP++L+ Sbjct: 28 KRGKGLLRVNGRPLDQIEPKVLQYKLQEPLLLL 60
BLAST of EMLSAG00000000749 vs. SwissProt
Match: gi|54039449|sp|Q9W237.1|RS16_DROME (RecName: Full=40S ribosomal protein S16) HSP 1 Score: 50.447 bits (119), Expect = 7.645e-8 Identity = 21/33 (63.64%), Postives = 28/33 (84.85%), Query Frame = 0 Query: 17 KCGKGIIKVNGSPLEHVEPNVLQYKLKEPIVLV 49 K G G++KVNG PLE +EP VLQYKL+EP++L+ Sbjct: 28 KRGNGLLKVNGRPLEQIEPKVLQYKLQEPLLLL 60
BLAST of EMLSAG00000000749 vs. SwissProt
Match: gi|59800207|sp|Q6FR56.1|RS16_CANGA (RecName: Full=40S ribosomal protein S16) HSP 1 Score: 48.1358 bits (113), Expect = 4.395e-7 Identity = 20/34 (58.82%), Postives = 29/34 (85.29%), Query Frame = 0 Query: 16 IKCGKGIIKVNGSPLEHVEPNVLQYKLKEPIVLV 49 +K GKG+IKVNGSP+ VEP +L++K+ EP++LV Sbjct: 22 VKAGKGLIKVNGSPITLVEPEILRFKVYEPLLLV 55
BLAST of EMLSAG00000000749 vs. SwissProt
Match: gi|338819318|sp|P0CX51.1|RS16A_YEAST (RecName: Full=40S ribosomal protein S16-A; AltName: Full=RP61R >gi|338819319|sp|P0CX52.1|RS16B_YEAST RecName: Full=40S ribosomal protein S16-B; AltName: Full=RP61R) HSP 1 Score: 48.1358 bits (113), Expect = 4.830e-7 Identity = 20/34 (58.82%), Postives = 29/34 (85.29%), Query Frame = 0 Query: 16 IKCGKGIIKVNGSPLEHVEPNVLQYKLKEPIVLV 49 +K GKG+IKVNGSP+ VEP +L++K+ EP++LV Sbjct: 22 VKAGKGLIKVNGSPITLVEPEILRFKVYEPLLLV 55
BLAST of EMLSAG00000000749 vs. SwissProt
Match: gi|50403607|sp|P62249.2|RS16_HUMAN (RecName: Full=40S ribosomal protein S16 >gi|54039370|sp|P62250.2|RS16_RAT RecName: Full=40S ribosomal protein S16 >gi|54039372|sp|P14131.4|RS16_MOUSE RecName: Full=40S ribosomal protein S16 >gi|60394813|sp|Q29201.4|RS16_PIG RecName: Full=40S ribosomal protein S16 >gi|108860953|sp|Q3T0X6.3|RS16_BOVIN RecName: Full=40S ribosomal protein S16) HSP 1 Score: 48.1358 bits (113), Expect = 5.670e-7 Identity = 23/42 (54.76%), Postives = 29/42 (69.05%), Query Frame = 0 Query: 10 KIITKMIKC--GKGIIKVNGSPLEHVEPNVLQYKLKEPIVLV 49 K T + C G G+IKVNG PLE +EP LQYKL EP++L+ Sbjct: 17 KTATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLL 58
BLAST of EMLSAG00000000749 vs. SwissProt
Match: gi|2500429|sp|Q22054.3|RS16_CAEEL (RecName: Full=40S ribosomal protein S16) HSP 1 Score: 47.7506 bits (112), Expect = 6.240e-7 Identity = 22/42 (52.38%), Postives = 31/42 (73.81%), Query Frame = 0 Query: 10 KIITKMIKC--GKGIIKVNGSPLEHVEPNVLQYKLKEPIVLV 49 K T + C G+G+IKVNG PLE +EP +L+ KL+EP++LV Sbjct: 15 KTATAVAHCKKGQGLIKVNGRPLEFLEPQILRIKLQEPLLLV 56
BLAST of EMLSAG00000000749 vs. SwissProt
Match: gi|54039445|sp|Q90YQ7.1|RS16_ICTPU (RecName: Full=40S ribosomal protein S16) HSP 1 Score: 47.7506 bits (112), Expect = 7.138e-7 Identity = 23/42 (54.76%), Postives = 29/42 (69.05%), Query Frame = 0 Query: 10 KIITKMIKC--GKGIIKVNGSPLEHVEPNVLQYKLKEPIVLV 49 K T + C G G+IKVNG PLE +EP LQYKL EP++L+ Sbjct: 17 KTATAVAHCKRGNGLIKVNGRPLETIEPATLQYKLLEPVLLL 58
BLAST of EMLSAG00000000749 vs. SwissProt
Match: gi|54039448|sp|Q98TR7.1|RS16_HETFO (RecName: Full=40S ribosomal protein S16) HSP 1 Score: 47.7506 bits (112), Expect = 7.138e-7 Identity = 23/42 (54.76%), Postives = 29/42 (69.05%), Query Frame = 0 Query: 10 KIITKMIKC--GKGIIKVNGSPLEHVEPNVLQYKLKEPIVLV 49 K T + C G G+IKVNG PLE +EP LQYKL EP++L+ Sbjct: 17 KTATAVAHCKRGNGLIKVNGRPLETIEPATLQYKLLEPVLLL 58
BLAST of EMLSAG00000000749 vs. SwissProt
Match: gi|54039446|sp|Q95V31.1|RS16_SPOFR (RecName: Full=40S ribosomal protein S16) HSP 1 Score: 47.7506 bits (112), Expect = 7.914e-7 Identity = 20/33 (60.61%), Postives = 28/33 (84.85%), Query Frame = 0 Query: 17 KCGKGIIKVNGSPLEHVEPNVLQYKLKEPIVLV 49 K G G+++VNG PL+ VEP +LQYKL+EPI+L+ Sbjct: 31 KRGHGVLRVNGRPLDLVEPRLLQYKLQEPILLL 63
BLAST of EMLSAG00000000749 vs. Select Arthropod Genomes
Match: AHN56526.1 (ribosomal protein S16, isoform B [Drosophila melanogaster]) HSP 1 Score: 50.447 bits (119), Expect = 3.705e-8 Identity = 21/33 (63.64%), Postives = 28/33 (84.85%), Query Frame = 0 Query: 17 KCGKGIIKVNGSPLEHVEPNVLQYKLKEPIVLV 49 K G G++KVNG PLE +EP VLQYKL+EP++L+ Sbjct: 28 KRGNGLLKVNGRPLEQIEPKVLQYKLQEPLLLL 60
BLAST of EMLSAG00000000749 vs. Select Arthropod Genomes
Match: AAF46862.1 (ribosomal protein S16, isoform A [Drosophila melanogaster]) HSP 1 Score: 50.447 bits (119), Expect = 3.705e-8 Identity = 21/33 (63.64%), Postives = 28/33 (84.85%), Query Frame = 0 Query: 17 KCGKGIIKVNGSPLEHVEPNVLQYKLKEPIVLV 49 K G G++KVNG PLE +EP VLQYKL+EP++L+ Sbjct: 28 KRGNGLLKVNGRPLEQIEPKVLQYKLQEPLLLL 60
BLAST of EMLSAG00000000749 vs. Select Arthropod Genomes
Match: XP_001122174.1 (PREDICTED: 40S ribosomal protein S16 [Apis mellifera]) HSP 1 Score: 48.9062 bits (115), Expect = 1.187e-7 Identity = 22/33 (66.67%), Postives = 28/33 (84.85%), Query Frame = 0 Query: 17 KCGKGIIKVNGSPLEHVEPNVLQYKLKEPIVLV 49 K G+G ++VNG PLE VEP VLQYKL+EPI+L+ Sbjct: 28 KRGRGNLRVNGRPLELVEPRVLQYKLQEPILLL 60
BLAST of EMLSAG00000000749 vs. Select Arthropod Genomes
Match: EAA43797.2 (AGAP011424-PA, partial [Anopheles gambiae str. PEST]) HSP 1 Score: 48.521 bits (114), Expect = 1.677e-7 Identity = 19/42 (45.24%), Postives = 32/42 (76.19%), Query Frame = 0 Query: 10 KIITKMIKC--GKGIIKVNGSPLEHVEPNVLQYKLKEPIVLV 49 K T + C GKG++++NG PL+ +EP +L+YKL+EP++L+ Sbjct: 19 KTATAVAHCKRGKGLLRINGRPLDQIEPKILRYKLQEPLLLL 60
BLAST of EMLSAG00000000749 vs. Select Arthropod Genomes
Match: EEB11520.1 (40S ribosomal protein S16, putative [Pediculus humanus corporis]) HSP 1 Score: 47.3654 bits (111), Expect = 4.891e-7 Identity = 20/33 (60.61%), Postives = 27/33 (81.82%), Query Frame = 0 Query: 17 KCGKGIIKVNGSPLEHVEPNVLQYKLKEPIVLV 49 K GKG I+VNG PL+ +EP +LQYKL+EP +L+ Sbjct: 29 KRGKGNIRVNGRPLDMIEPRILQYKLQEPFLLL 61
BLAST of EMLSAG00000000749 vs. Select Arthropod Genomes
Match: gb|EEZ98753.1| (40S ribosomal protein S16-like Protein [Tribolium castaneum]) HSP 1 Score: 47.3654 bits (111), Expect = 5.901e-7 Identity = 21/33 (63.64%), Postives = 27/33 (81.82%), Query Frame = 0 Query: 17 KCGKGIIKVNGSPLEHVEPNVLQYKLKEPIVLV 49 K GKGI++VNG PL VEP +LQ KL+EPI+L+ Sbjct: 32 KRGKGILRVNGRPLSQVEPKMLQDKLQEPILLL 64
BLAST of EMLSAG00000000749 vs. nr
Match: gi|1108477083|emb|CRK95108.1| (CLUMA_CG008586, isoform A [Clunio marinus]) HSP 1 Score: 53.9138 bits (128), Expect = 9.291e-7 Identity = 23/46 (50.00%), Postives = 33/46 (71.74%), Query Frame = 0 Query: 4 FIYKIVKIITKMIKCGKGIIKVNGSPLEHVEPNVLQYKLKEPIVLV 49 F K I T K G+G+++VNG PLE +EP +LQYKL+EP++L+ Sbjct: 22 FGRKKTAIATAYCKRGRGLLRVNGRPLEQIEPKILQYKLQEPLLLL 67
BLAST of EMLSAG00000000749 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold272_size230267-snap-gene-0.18 (protein:Tk00250 transcript:maker-scaffold272_size230267-snap-gene-0.18-mRNA-1 annotation:"40s ribosomal protein s16-like") HSP 1 Score: 54.299 bits (129), Expect = 8.278e-11 Identity = 23/33 (69.70%), Postives = 28/33 (84.85%), Query Frame = 0 Query: 17 KCGKGIIKVNGSPLEHVEPNVLQYKLKEPIVLV 49 K GKG++KVNG PLE VEP LQYKL+EPI+L+ Sbjct: 27 KRGKGLVKVNGRPLEQVEPKALQYKLQEPILLL 59 The following BLAST results are available for this feature:
BLAST of EMLSAG00000000749 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO) Total hits: 25
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BLAST of EMLSAG00000000749 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA) Total hits: 6
BLAST of EMLSAG00000000749 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self) Total hits: 2
BLAST of EMLSAG00000000749 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt) Total hits: 9
BLAST of EMLSAG00000000749 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods) Total hits: 6
BLAST of EMLSAG00000000749 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017)) Total hits: 1
BLAST of EMLSAG00000000749 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins) Total hits: 1
Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Cross References
External references for this gene
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at LSalAtl2s111:437363..462272- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>EMLSAG00000000749-683515 ID=EMLSAG00000000749-683515|Name=EMLSAG00000000749|organism=Lepeophtheirus salmonis|type=gene|length=24910bp|location=Sequence derived from alignment at LSalAtl2s111:437363..462272- (Lepeophtheirus salmonis)back to top Add to Basket
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