EMLSAG00000000755, EMLSAG00000000755-683521 (gene) Lepeophtheirus salmonis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of EMLSAG00000000755 vs. C. finmarchicus
Match: gi|592943249|gb|GAXK01015304.1| (TSA: Calanus finmarchicus comp630977_c0_seq1 transcribed RNA sequence) HSP 1 Score: 33.8834 bits (76), Expect = 4.931e-1 Identity = 14/35 (40.00%), Postives = 24/35 (68.57%), Query Frame = 0 Query: 200 INDLNEIENVGANKKTRLVSPEALMRNPWLQNKCK 234 ++D ++E VGA + RL+SP+ L R PW+++ C Sbjct: 464 VDDDGQVEVVGAMRN*RLISPDHLTR-PWVRSDCA 565
BLAST of EMLSAG00000000755 vs. C. finmarchicus
Match: gi|592796674|gb|GAXK01157894.1| (TSA: Calanus finmarchicus comp202971_c0_seq1 transcribed RNA sequence) HSP 1 Score: 31.9574 bits (71), Expect = 3.307e+0 Identity = 31/144 (21.53%), Postives = 64/144 (44.44%), Query Frame = 0 Query: 4 ISFGLSMLLAFLFQVWAQSGLKQDECHALDGTPCLQPTESEVLKYFQYYGWNSTCFKYKGKRRCMIQTGRLRLCSCSKECDCGGIENDLTKKSVFRKPFNMKKYGRKRRINLKSRSAQVPSDIGNTNIKVFEQWQIKIERNEKG 147 +S G +L L ++ +G K H+ G+ TE+++ Y N C + + +I S S+E D I++ + K +K++ R R +L S++ ++ ++GN +++ E ++ I E+G Sbjct: 1270 LSMGCLLLRIALHEIIKPTGEKN---HSEPGSAATNITENKLADY----EGNPECVAGRAVQAAVI--------SYSQEADSYAIQHKVNK---------LKQHHR-RAFDLISKALKIDEEVGNRDVRTVEMYKKGINELERG 1626
BLAST of EMLSAG00000000755 vs. C. finmarchicus
Match: gi|592917540|gb|GAXK01040835.1| (TSA: Calanus finmarchicus comp5199355_c0_seq1 transcribed RNA sequence) HSP 1 Score: 29.6462 bits (65), Expect = 5.610e+0 Identity = 19/52 (36.54%), Postives = 26/52 (50.00%), Query Frame = 0 Query: 41 TESEVLKYFQYYGWNSTCFKYKGKRRCM--IQTGRLRLCSCSKECDCGGIEN 90 T S +KYF+Y+ W T KYK K + + +Q + RL C C I N Sbjct: 101 TTSFFIKYFEYFEWKMTSQKYKNK*KLIFVMQPPKYRL-----RCGCNMIVN 241
BLAST of EMLSAG00000000755 vs. L. salmonis peptides
Match: EMLSAP00000000755 (pep:novel supercontig:LSalAtl2s:LSalAtl2s111:652866:654437:-1 gene:EMLSAG00000000755 transcript:EMLSAT00000000755 description:"snap_masked-LSalAtl2s111-processed-gene-5.5") HSP 1 Score: 613.609 bits (1581), Expect = 0.000e+0 Identity = 296/296 (100.00%), Postives = 296/296 (100.00%), Query Frame = 0 Query: 1 MARISFGLSMLLAFLFQVWAQSGLKQDECHALDGTPCLQPTESEVLKYFQYYGWNSTCFKYKGKRRCMIQTGRLRLCSCSKECDCGGIENDLTKKSVFRKPFNMKKYGRKRRINLKSRSAQVPSDIGNTNIKVFEQWQIKIERNEKGKTSCYISNPSEDNPNNGLQSSESKETNLDDDLKRSEDLEERSLLSETSPENPINDLNEIENVGANKKTRLVSPEALMRNPWLQNKCKCTCEADHFMNARPLERNNQRLSNLEEDTNEHIDDYNSQLLYPNIHQQSLDEKKVDLRNINDV 296 MARISFGLSMLLAFLFQVWAQSGLKQDECHALDGTPCLQPTESEVLKYFQYYGWNSTCFKYKGKRRCMIQTGRLRLCSCSKECDCGGIENDLTKKSVFRKPFNMKKYGRKRRINLKSRSAQVPSDIGNTNIKVFEQWQIKIERNEKGKTSCYISNPSEDNPNNGLQSSESKETNLDDDLKRSEDLEERSLLSETSPENPINDLNEIENVGANKKTRLVSPEALMRNPWLQNKCKCTCEADHFMNARPLERNNQRLSNLEEDTNEHIDDYNSQLLYPNIHQQSLDEKKVDLRNINDV Sbjct: 1 MARISFGLSMLLAFLFQVWAQSGLKQDECHALDGTPCLQPTESEVLKYFQYYGWNSTCFKYKGKRRCMIQTGRLRLCSCSKECDCGGIENDLTKKSVFRKPFNMKKYGRKRRINLKSRSAQVPSDIGNTNIKVFEQWQIKIERNEKGKTSCYISNPSEDNPNNGLQSSESKETNLDDDLKRSEDLEERSLLSETSPENPINDLNEIENVGANKKTRLVSPEALMRNPWLQNKCKCTCEADHFMNARPLERNNQRLSNLEEDTNEHIDDYNSQLLYPNIHQQSLDEKKVDLRNINDV 296
BLAST of EMLSAG00000000755 vs. L. salmonis peptides
Match: EMLSAP00000000754 (pep:novel supercontig:LSalAtl2s:LSalAtl2s111:578963:580540:1 gene:EMLSAG00000000754 transcript:EMLSAT00000000754 description:"maker-LSalAtl2s111-snap-gene-5.20") HSP 1 Score: 82.8037 bits (203), Expect = 3.196e-18 Identity = 48/122 (39.34%), Postives = 65/122 (53.28%), Query Frame = 0 Query: 10 MLLAFLFQVWAQSGLK----QDECHALDGTPCLQPTESEVLKYFQYYGWNSTCFKYKG-KRRCMIQTGRLRLCSCSKEC-DCGG--IENDLTKKSVFRKPFNMKKYGRKRRINLKSRSAQVP 123 LA ++ G++ + C +G PCL T+ +V +YFQY+ WNSTCFKY G K+RCM+ G LR C CSK+C CG I D K + F K N K+ +R S +VP Sbjct: 6 FFLALSIMLFLNEGVEMMKDKGGCRTTNGVPCLHKTDPKVYQYFQYHKWNSTCFKYNGRKQRCMVSPGVLRPCKCSKQCGGCGNKRIPTDQRKSTSF-KSLNSHKFKVSQRNGEFSAINKVP 126
BLAST of EMLSAG00000000755 vs. L. salmonis peptides
Match: EMLSAP00000011068 (pep:novel supercontig:LSalAtl2s:LSalAtl2s747:71658:81234:-1 gene:EMLSAG00000011068 transcript:EMLSAT00000011068 description:"maker-LSalAtl2s747-augustus-gene-0.5") HSP 1 Score: 58.5362 bits (140), Expect = 8.073e-10 Identity = 30/77 (38.96%), Postives = 40/77 (51.95%), Query Frame = 0 Query: 7 GLSMLLAFLFQVWAQSGLKQDECHALDGTPCLQPTESEVLKYFQYYGWNSTCFKYKGKRRCMIQTGRLRLCSCSKEC 83 GL ML+ F F G+ C + GT C+ + YF Y+ WNSTCF Y+ CMI G L+ C CS++C Sbjct: 413 GLLMLIGFPFVF----GI----CKSRFGTNCMTIDDPGARVYFAYFNWNSTCFAYQDGHYCMINLGYLQPCDCSQDC 481 HSP 2 Score: 55.0694 bits (131), Expect = 1.136e-8 Identity = 22/55 (40.00%), Postives = 32/55 (58.18%), Query Frame = 0 Query: 29 CHALDGTPCLQPTESEVLKYFQYYGWNSTCFKYKGKRRCMIQTGRLRLCSCSKEC 83 C +++G C+ YF ++ W STCFKY +R CMI G+LR C+C +C Sbjct: 24 CKSVNGEICMTKNNQGAAIYFNWFKWESTCFKYSEQRWCMISLGQLRPCTCENKC 78
BLAST of EMLSAG00000000755 vs. L. salmonis peptides
Match: EMLSAP00000000866 (pep:novel supercontig:LSalAtl2s:LSalAtl2s114:123519:124869:1 gene:EMLSAG00000000866 transcript:EMLSAT00000000866 description:"maker-LSalAtl2s114-augustus-gene-1.6") HSP 1 Score: 50.0618 bits (118), Expect = 2.869e-7 Identity = 25/70 (35.71%), Postives = 33/70 (47.14%), Query Frame = 0 Query: 14 FLFQVWAQSGLKQDECHALDGTPCLQPTESEVLKYFQYYGWNSTCFKYKGKRRCMIQTGRLRLCSCSKEC 83 LF + EC G C+ E YF+++ + STCFKY +R CMI G LR C C+ C Sbjct: 9 ILFVAVCATKQAISECLTTSGLRCMTKDEDGADLYFKHFKFKSTCFKYNEQRLCMITPGNLRQCECTNNC 78 The following BLAST results are available for this feature:
BLAST of EMLSAG00000000755 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO) Total hits: 0
BLAST of EMLSAG00000000755 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA) Total hits: 3
BLAST of EMLSAG00000000755 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self) Total hits: 4
BLAST of EMLSAG00000000755 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt) Total hits: 0
BLAST of EMLSAG00000000755 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods) Total hits: 0
BLAST of EMLSAG00000000755 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017)) Total hits: 0
BLAST of EMLSAG00000000755 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins) Total hits: 0
Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Cross References
External references for this gene
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at LSalAtl2s111:652866..654437- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>EMLSAG00000000755-683521 ID=EMLSAG00000000755-683521|Name=EMLSAG00000000755|organism=Lepeophtheirus salmonis|type=gene|length=1572bp|location=Sequence derived from alignment at LSalAtl2s111:652866..654437- (Lepeophtheirus salmonis)back to top Add to Basket
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