EMLSAG00000000775, EMLSAG00000000775-683541 (gene) Lepeophtheirus salmonis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of EMLSAG00000000775 vs. C. finmarchicus
Match: gi|592887209|gb|GAXK01071166.1| (TSA: Calanus finmarchicus comp2036492_c0_seq1 transcribed RNA sequence) HSP 1 Score: 31.187 bits (69), Expect = 1.708e+0 Identity = 12/31 (38.71%), Postives = 20/31 (64.52%), Query Frame = 0 Query: 11 TEDIVVAGNNIPNTSIIKWENDRNDLYCLMN 41 T+D V N + + +I++EN+RND Y + N Sbjct: 231 TDDYEVKKNEVETSELIQYENERNDKYEVRN 323
BLAST of EMLSAG00000000775 vs. L. salmonis peptides
Match: EMLSAP00000000775 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1124:54869:55594:-1 gene:EMLSAG00000000775 transcript:EMLSAT00000000775 description:"maker-LSalAtl2s1124-snap-gene-0.2") HSP 1 Score: 389.423 bits (999), Expect = 3.106e-139 Identity = 187/187 (100.00%), Postives = 187/187 (100.00%), Query Frame = 0 Query: 1 MALAKVSGLPTEDIVVAGNNIPNTSIIKWENDRNDLYCLMNSLKTKFKIFTYAEKKNLTLPPQIDIVTYKDDGNSKVMPSYKDHKCGMQKRLMLCTQAHIDTEISYSKFAQLIPKCCVLPGASGTYKVCAGFVYQNDVLMSSAREFDYKKRMKEDVCDMDDKLCMVHNCENCPGQSNLAKKVLELFK 187 MALAKVSGLPTEDIVVAGNNIPNTSIIKWENDRNDLYCLMNSLKTKFKIFTYAEKKNLTLPPQIDIVTYKDDGNSKVMPSYKDHKCGMQKRLMLCTQAHIDTEISYSKFAQLIPKCCVLPGASGTYKVCAGFVYQNDVLMSSAREFDYKKRMKEDVCDMDDKLCMVHNCENCPGQSNLAKKVLELFK Sbjct: 1 MALAKVSGLPTEDIVVAGNNIPNTSIIKWENDRNDLYCLMNSLKTKFKIFTYAEKKNLTLPPQIDIVTYKDDGNSKVMPSYKDHKCGMQKRLMLCTQAHIDTEISYSKFAQLIPKCCVLPGASGTYKVCAGFVYQNDVLMSSAREFDYKKRMKEDVCDMDDKLCMVHNCENCPGQSNLAKKVLELFK 187
BLAST of EMLSAG00000000775 vs. Select Arthropod Genomes
Match: EFX66632.1 (hypothetical protein DAPPUDRAFT_116125 [Daphnia pulex]) HSP 1 Score: 59.6918 bits (143), Expect = 7.096e-10 Identity = 44/141 (31.21%), Postives = 61/141 (43.26%), Query Frame = 0 Query: 63 QIDIVTYKDDGNSKVMPSYKD---------HKCGMQKRLMLCTQAHIDTE--------------ISYSKFAQLIPKCCVLPGASGTYKVCAGFVYQNDVLMSSAREFDYKKRMKED--VCDMDDKLCMVHNCENCPGQSNL 178 Q I Y D S+ +P ++ + MQKRL+LC A + E +S F L P V GA GT+ VC +QN LM SA + +K + D VC + ++ CM+ C CPG NL Sbjct: 281 QTIIDFYVSDEYSRQLPGMRNVKSVKLSDGQRIKMQKRLLLCNIADLHIEYKKKMNLTTGSRKPFGFSIFVSLRPSHVVTVGAGGTHSVCVCVYHQNVKLMLSAIDVVNEKNLFMDKIVCSVHNQECMMDRCAACPGTENL 421
BLAST of EMLSAG00000000775 vs. Select Arthropod Genomes
Match: EFX75283.1 (hypothetical protein DAPPUDRAFT_108106 [Daphnia pulex]) HSP 1 Score: 58.151 bits (139), Expect = 2.210e-9 Identity = 43/141 (30.50%), Postives = 63/141 (44.68%), Query Frame = 0 Query: 69 YKDDGNSKVMPSYKDHKC---------GMQKRLMLCTQAHIDTE-------------ISYSKFAQLIPKCCVLPGASGTYKVCAGFVYQNDVLMSSAREFDYKKRMKED--VCDMDDKLCMVHNCENCPGQSNLAKKVLEL 185 Y D S+ +P K K +QKRL+L + E + +S FA L PK + G+SGT+ VC +QN LM S+ ++ + D VC + +K CM+ C NCPG + L + EL Sbjct: 290 YISDEYSRQLPGMKSVKSVKQADGKRLKVQKRLLLLNIDELHGEYKKKFKDIVGIKTVGFSAFADLRPKHVITVGSSGTHSVCVCVYHQNVKLMLSSIGLGEERHLLMDKVVCSVYNKTCMLSGCPNCPGSNALESFLEEL 430
BLAST of EMLSAG00000000775 vs. nr
Match: gi|1048002055|ref|XP_017473543.1| (PREDICTED: uncharacterized protein LOC108364380 [Rhagoletis zephyria] >gi|1048005507|ref|XP_017490024.1| PREDICTED: uncharacterized protein LOC108378244 [Rhagoletis zephyria] >gi|1048017894|ref|XP_017470011.1| PREDICTED: uncharacterized protein LOC108361772 [Rhagoletis zephyria] >gi|1048021305|ref|XP_017471158.1| PREDICTED: uncharacterized protein LOC108362614 [Rhagoletis zephyria] >gi|1048048687|ref|XP_017479386.1| PREDICTED: uncharacterized protein LOC108368929 [Rhagoletis zephyria]) HSP 1 Score: 67.781 bits (164), Expect = 4.835e-10 Identity = 46/147 (31.29%), Postives = 70/147 (47.62%), Query Frame = 0 Query: 69 YKDDGNSKVMPSYKD--------HKCGMQKRLMLCT---------QAHIDTEISYSKFAQLIPKCCVLPGASGTYKVCAGFVYQNDVLM-----------SSAREFD-YKKRMKEDVCDMDDKLCMVHNCENCPGQSNLAKKVLELF 186 Y+ D S++MP KD K MQKR++LC H D +I ++KF QL PK CVL G+SGT+ VC ++N LM S + + Y+ +K +C C + C NCPG + + + +++ F Sbjct: 202 YQRDDMSRLMPGMKDWVSVRIDGKKVQMQKRIILCNLNELFASFQSEHEDIKIGFTKFTQLRPKHCVLAGSSGTHTVCVCIYHENVKLMLKEINLNYLTNDSPEDLNSYRDCLKLTMCPNVSTSCHLGECSNCPGTTFIKENLVKSF 348
BLAST of EMLSAG00000000775 vs. nr
Match: gi|1048028977|ref|XP_017475233.1| (PREDICTED: uncharacterized protein LOC108365655 [Rhagoletis zephyria]) HSP 1 Score: 67.781 bits (164), Expect = 4.890e-10 Identity = 46/147 (31.29%), Postives = 70/147 (47.62%), Query Frame = 0 Query: 69 YKDDGNSKVMPSYKD--------HKCGMQKRLMLCT---------QAHIDTEISYSKFAQLIPKCCVLPGASGTYKVCAGFVYQNDVLM-----------SSAREFD-YKKRMKEDVCDMDDKLCMVHNCENCPGQSNLAKKVLELF 186 Y+ D S++MP KD K MQKR++LC H D +I ++KF QL PK CVL G+SGT+ VC ++N LM S + + Y+ +K +C C + C NCPG + + + +++ F Sbjct: 154 YQRDDMSRLMPGMKDWVSVRIDGKKVQMQKRIILCNLNELFASFQSEHEDIKIGFTKFTQLRPKHCVLAGSSGTHTVCVCIYHENVKLMLKEINLNYLTNDSPEDLNSYRDCLKLTMCPNVSTSCHLGECSNCPGTTFIKENLVKSF 300
BLAST of EMLSAG00000000775 vs. nr
Match: gi|1009402076|gb|KYN21878.1| (hypothetical protein ALC57_05740 [Trachymyrmex cornetzi]) HSP 1 Score: 67.0106 bits (162), Expect = 1.036e-9 Identity = 45/147 (30.61%), Postives = 73/147 (49.66%), Query Frame = 0 Query: 69 YKDDGNSKVMPSYKD--------HKCGMQKRLM---------LCTQAHIDTEISYSKFAQLIPKCCVLPGASGTYKVCAGFVYQNDVLMSSAREFD------------YKKRMKEDVCDMDDKLCMVHNCENCPGQSNLAKKVLELF 186 Y D NS++MP KD + +QKRL+ L + + D I +SKFA L PK C+LPGASGT+ VC ++ N L+ A + + YK +++ C+ + C + +C+ CP +N+ + +L+L Sbjct: 175 YISDENSRIMPGKKDVVSVKNENGRSLVQKRLLLLDLKGLFCLYKERNQDFPIGFSKFALLRPKECILPGASGTHSVCVCIIHHNCKLLLDAIDIEKLTKNSENPIKNYKDVLRQITCEHPSENCYLGDCDECPSIANVCRYLLQLL 321
BLAST of EMLSAG00000000775 vs. nr
Match: gi|1012980521|gb|KYQ54441.1| (hypothetical protein ALC60_06673 [Trachymyrmex zeteki]) HSP 1 Score: 67.0106 bits (162), Expect = 1.040e-9 Identity = 48/148 (32.43%), Postives = 71/148 (47.97%), Query Frame = 0 Query: 69 YKDDGNSKVMPSYKD--------HKCGMQKRLMLC---------TQAHIDTEISYSKFAQLIPKCCVLPGASGTYKVCAGFVYQNDVLMSSAREF------------DYKKRMKEDVCDMDDKLCMVHNCENCPGQSNLAKKVLELFK 187 Y+ D NS+V+P KD +C KRL+L +++ D ++ +SKFAQL P+ C+L G+SGT+ VC ++QN LM A DYK +++ C + C + CE CP S L V EL + Sbjct: 82 YESDTNSRVIPGMKDVISVKNEDGRC--LKRLLLFDLRGLFLAFKESNPDIKVGFSKFAQLRPRQCILAGSSGTHSVCVCTIHQNCKLMLDAVNITKLTEKSVKPISDYKDCLQQITCTDPSEECSLGECEKCPNISELMLNVQELLE 227
BLAST of EMLSAG00000000775 vs. nr
Match: gi|828207236|ref|XP_012557214.1| (PREDICTED: uncharacterized protein LOC100212627 [Hydra vulgaris]) HSP 1 Score: 64.6994 bits (156), Expect = 5.648e-9 Identity = 44/138 (31.88%), Postives = 69/138 (50.00%), Query Frame = 0 Query: 69 YKDDGNSKVMPSYKDH--------KCGMQKRLMLCT---------QAHIDTEISYSKFAQLIPKCCV-LPGASGTYKVCAGFVYQNDVLMSSARE--FDYKKRMKEDVCDMDDKLCMVHNCENCPGQSNLAKKVLELF 186 Y+ D S++ P K + + QKRL+L + +D +I +SKF +L PK C+ + GASG + VC +QN L++ DYK + VCD+ ++ CM+H C+NCP L + + LF Sbjct: 489 YQSDEYSRMCPGKKQYVSTQVDGKRHHFQKRLLLLNIRELYLEFGKISLDVKIRFSKFCELRPKWCIPVGGASGLHSVCVCEYHQNAKLLALKIPDISDYKNLLTLVVCDLTNRDCMLHCCDNCPDNDTLKEYLTTLF 626 The following BLAST results are available for this feature:
BLAST of EMLSAG00000000775 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO) Total hits: 0
BLAST of EMLSAG00000000775 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA) Total hits: 1
BLAST of EMLSAG00000000775 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self) Total hits: 1
BLAST of EMLSAG00000000775 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt) Total hits: 0
BLAST of EMLSAG00000000775 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods) Total hits: 2
BLAST of EMLSAG00000000775 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017)) Total hits: 25
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BLAST of EMLSAG00000000775 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins) Total hits: 0
Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Cross References
External references for this gene
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at LSalAtl2s1124:54869..55594- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>EMLSAG00000000775-683541 ID=EMLSAG00000000775-683541|Name=EMLSAG00000000775|organism=Lepeophtheirus salmonis|type=gene|length=726bp|location=Sequence derived from alignment at LSalAtl2s1124:54869..55594- (Lepeophtheirus salmonis)back to top Add to Basket
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