EMLSAG00000000786, EMLSAG00000000786-683552 (gene) Lepeophtheirus salmonis

Overview


Name	EMLSAG00000000786
Unique Name	EMLSAG00000000786-683552
Type	gene
Organism	Lepeophtheirus salmonis (salmon louse)

Associated RNAi Experiments

Nothing found

Homology

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BLAST of EMLSAG00000000786 vs. GO
Match: - (symbol:pio "piopio" species:7227 "Drosophila melanogaster" [GO:0007475 "apposition of dorsal and ventral imaginal disc-derived wing surfaces" evidence=IMP] [GO:0003674 "molecular_function" evidence=ND] [GO:0007424 "open tracheal system development" evidence=IMP] [GO:0045177 "apical part of cell" evidence=IDA] [GO:0008362 "chitin-based embryonic cuticle biosynthetic process" evidence=IMP] [GO:0040005 "chitin-based cuticle attachment to epithelium" evidence=IMP] EMBL:AE013599 GO:GO:0008362 GO:GO:0045177 GO:GO:0007475 GO:GO:0007424 InterPro:IPR001507 OrthoDB:EOG74BJSD Pfam:PF00100 SMART:SM00241 PROSITE:PS51034 GO:GO:0040005 EMBL:BT003795 EMBL:BT011382 EMBL:AY862157 RefSeq:NP_001163295.1 RefSeq:NP_726461.1 UniGene:Dm.4060 MINT:MINT-1659650 STRING:7227.FBpp0072219 EnsemblMetazoa:FBtr0072312 EnsemblMetazoa:FBtr0301502 GeneID:37929 KEGG:dme:Dmel_CG3541 UCSC:CG3541-RB CTD:37929 FlyBase:FBgn0020521 eggNOG:NOG85683 GeneTree:ENSGT00390000001072 InParanoid:Q8IRK0 OMA:PATIEVF GenomeRNAi:37929 NextBio:806100 Uniprot:Q8IRK0)

HSP 1 Score: 58.151 bits (139), Expect = 3.778e-9
Identity = 24/36 (66.67%), Postives = 31/36 (86.11%), Query Frame = 0

Query:    1 MIYPKGLSKNSTCMTEFIELEGTVTYKIPLHSCNTM 36
            MIYPKGLSKNSTC++E+ +  G++ YK+PL SCNTM
Sbjct:   91 MIYPKGLSKNSTCLSEYRDHVGSLRYKLPLRSCNTM 126

HSP 2 Score: 55.4546 bits (132), Expect = 3.354e-8
Identity = 49/131 (37.40%), Postives = 73/131 (55.73%), Query Frame = 0

Query:   42 PVCNPNGENTLKRRKKRQTITELDSNEDSYDLAENDLNVRVFSGYFVRKSDDEQPREEDA----------------NFAIGIAIVGLILIVVVIIAIMILLSKRRRRKDLSTTGSSIYSGPYTNTAYSNSS 156
            P C    + + KR K++      DS E+    A     + VFSG +V ++++    +EDA                 FAI IAI GLIL++ V+ A++ +++ RR  K +S +GSSIYSGPYTNTA+S+SS
Sbjct:  340 PTCQEAPQCSGKRPKRQAAA---DSKEEDGLPA----TIEVFSGLYVNENENANDSDEDAVYKEKTLDDALCVSQRTFAIAIAIAGLILMLAVVAAVLCIMA-RRSTKTVSNSGSSIYSGPYTNTAFSHSS 462

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BLAST of EMLSAG00000000786 vs. C. finmarchicus
Match: gi|592931630|gb|GAXK01026923.1| (TSA: Calanus finmarchicus comp19504_c1_seq3 transcribed RNA sequence)

HSP 1 Score: 70.4774 bits (171), Expect = 1.534e-13
Identity = 30/40 (75.00%), Postives = 35/40 (87.50%), Query Frame = 0

Query:    1 MIYPKGLSKNSTCMTEFIELEGTVTYKIPLHSCNTMNTDV 40
            MIYPKGLSKNSTCMTE+I+ EG + Y +PL SCNTM+TDV
Sbjct:  390 MIYPKGLSKNSTCMTEYIQQEGIIIYVLPLRSCNTMSTDV 509

HSP 2 Score: 59.6918 bits (143), Expect = 5.533e-10
Identity = 66/133 (49.62%), Postives = 86/133 (64.66%), Query Frame = 0

Query:   40 VPPVCNPNGENTLKRRKKRQTITELDSNEDSYDLAENDLNVRVFSGYFVRKS----DDEQPREEDA----------------NFXXXXXXXXXXXXXXXXXXXXXXXSKXXXXXDLSTTGSSIYSGPYTNTAY 152
            VPP+C  NG N +  RKKRQ + E+D   ++YDL E +  ++V+SG +V ++    DDE     D                 +FAIGIAI GLIL+  V++AIMIL+S +RRRK+LSTTGSSIYSGPYTNTAY
Sbjct: 1080 VPPICE-NGVNIV--RKKRQVV-EVDERNNAYDLVEREETIKVYSGLYVNEAQDLDDDEFAENLDQPDVSVYDPNTFCISQRSFAIGIAIAGLILMTAVVVAIMILVS-KRRRKNLSTTGSSIYSGPYTNTAY 1463

[Close]

BLAST of EMLSAG00000000786 vs. C. finmarchicus
Match: gi|592931632|gb|GAXK01026921.1| (TSA: Calanus finmarchicus comp19504_c1_seq1 transcribed RNA sequence)

HSP 1 Score: 70.4774 bits (171), Expect = 1.579e-13
Identity = 30/40 (75.00%), Postives = 35/40 (87.50%), Query Frame = 0

Query:    1 MIYPKGLSKNSTCMTEFIELEGTVTYKIPLHSCNTMNTDV 40
            MIYPKGLSKNSTCMTE+I+ EG + Y +PL SCNTM+TDV
Sbjct:  390 MIYPKGLSKNSTCMTEYIQQEGIIIYVLPLRSCNTMSTDV 509

HSP 2 Score: 59.6918 bits (143), Expect = 5.643e-10
Identity = 66/133 (49.62%), Postives = 86/133 (64.66%), Query Frame = 0

Query:   40 VPPVCNPNGENTLKRRKKRQTITELDSNEDSYDLAENDLNVRVFSGYFVRKS----DDEQPREEDA----------------NFXXXXXXXXXXXXXXXXXXXXXXXSKXXXXXDLSTTGSSIYSGPYTNTAY 152
            VPP+C  NG N +  RKKRQ + E+D   ++YDL E +  ++V+SG +V ++    DDE     D                 +FAIGIAI GLIL+  V++AIMIL+S +RRRK+LSTTGSSIYSGPYTNTAY
Sbjct: 1080 VPPICE-NGVNIV--RKKRQVV-EVDERNNAYDLVEREETIKVYSGLYVNEAQDLDDDEFAENLDQPDVSVYDPNTFCISQRSFAIGIAIAGLILMTAVVVAIMILVS-KRRRKNLSTTGSSIYSGPYTNTAY 1463

[Close]

BLAST of EMLSAG00000000786 vs. C. finmarchicus
Match: gi|592931629|gb|GAXK01026924.1| (TSA: Calanus finmarchicus comp19504_c1_seq4 transcribed RNA sequence)

HSP 1 Score: 70.4774 bits (171), Expect = 1.731e-13
Identity = 30/40 (75.00%), Postives = 35/40 (87.50%), Query Frame = 0

Query:    1 MIYPKGLSKNSTCMTEFIELEGTVTYKIPLHSCNTMNTDV 40
            MIYPKGLSKNSTCMTE+I+ EG + Y +PL SCNTM+TDV
Sbjct:  390 MIYPKGLSKNSTCMTEYIQQEGIIIYVLPLRSCNTMSTDV 509

HSP 2 Score: 59.6918 bits (143), Expect = 5.260e-10
Identity = 66/133 (49.62%), Postives = 86/133 (64.66%), Query Frame = 0

Query:   40 VPPVCNPNGENTLKRRKKRQTITELDSNEDSYDLAENDLNVRVFSGYFVRKS----DDEQPREEDA----------------NFXXXXXXXXXXXXXXXXXXXXXXXSKXXXXXDLSTTGSSIYSGPYTNTAY 152
            VPP+C  NG N +  RKKRQ + E+D   ++YDL E +  ++V+SG +V ++    DDE     D                 +FAIGIAI GLIL+  V++AIMIL+S +RRRK+LSTTGSSIYSGPYTNTAY
Sbjct: 1038 VPPICE-NGVNIV--RKKRQVV-EVDERNNAYDLVEREETIKVYSGLYVNEAQDLDDDEFAENLDQPDVSVYDPNTFCISQRSFAIGIAIAGLILMTAVVVAIMILVS-KRRRKNLSTTGSSIYSGPYTNTAY 1421

[Close]

BLAST of EMLSAG00000000786 vs. C. finmarchicus
Match: gi|592931631|gb|GAXK01026922.1| (TSA: Calanus finmarchicus comp19504_c1_seq2 transcribed RNA sequence)

HSP 1 Score: 70.4774 bits (171), Expect = 1.783e-13
Identity = 30/40 (75.00%), Postives = 35/40 (87.50%), Query Frame = 0

Query:    1 MIYPKGLSKNSTCMTEFIELEGTVTYKIPLHSCNTMNTDV 40
            MIYPKGLSKNSTCMTE+I+ EG + Y +PL SCNTM+TDV
Sbjct:  390 MIYPKGLSKNSTCMTEYIQQEGIIIYVLPLRSCNTMSTDV 509

HSP 2 Score: 59.6918 bits (143), Expect = 5.369e-10
Identity = 66/133 (49.62%), Postives = 86/133 (64.66%), Query Frame = 0

Query:   40 VPPVCNPNGENTLKRRKKRQTITELDSNEDSYDLAENDLNVRVFSGYFVRKS----DDEQPREEDA----------------NFXXXXXXXXXXXXXXXXXXXXXXXSKXXXXXDLSTTGSSIYSGPYTNTAY 152
            VPP+C  NG N +  RKKRQ + E+D   ++YDL E +  ++V+SG +V ++    DDE     D                 +FAIGIAI GLIL+  V++AIMIL+S +RRRK+LSTTGSSIYSGPYTNTAY
Sbjct: 1038 VPPICE-NGVNIV--RKKRQVV-EVDERNNAYDLVEREETIKVYSGLYVNEAQDLDDDEFAENLDQPDVSVYDPNTFCISQRSFAIGIAIAGLILMTAVVVAIMILVS-KRRRKNLSTTGSSIYSGPYTNTAY 1421

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BLAST of EMLSAG00000000786 vs. L. salmonis peptides
Match: EMLSAP00000000786 (pep:novel supercontig:LSalAtl2s:LSalAtl2s112:137864:144339:-1 gene:EMLSAG00000000786 transcript:EMLSAT00000000786 description:"maker-LSalAtl2s112-augustus-gene-1.7")

HSP 1 Score: 320.472 bits (820), Expect = 5.833e-113
Identity = 156/156 (100.00%), Postives = 156/156 (100.00%), Query Frame = 0

Query:    1 MIYPKGLSKNSTCMTEFIELEGTVTYKIPLHSCNTMNTDVPPVCNPNGENTLKRRKKRQTITELDSNEDSYDLAENDLNVRVFSGYFVRKSDDEQPREEDANFAIGIAIVGLILIVVVIIAIMILLSKRRRRKDLSTTGSSIYSGPYTNTAYSNSS 156
            MIYPKGLSKNSTCMTEFIELEGTVTYKIPLHSCNTMNTDVPPVCNPNGENTLKRRKKRQTITELDSNEDSYDLAENDLNVRVFSGYFVRKSDDEQPREEDANFAIGIAIVGLILIVVVIIAIMILLSKRRRRKDLSTTGSSIYSGPYTNTAYSNSS
Sbjct:    1 MIYPKGLSKNSTCMTEFIELEGTVTYKIPLHSCNTMNTDVPPVCNPNGENTLKRRKKRQTITELDSNEDSYDLAENDLNVRVFSGYFVRKSDDEQPREEDANFAIGIAIVGLILIVVVIIAIMILLSKRRRRKDLSTTGSSIYSGPYTNTAYSNSS 156

[Close]

BLAST of EMLSAG00000000786 vs. Select Arthropod Genomes
Match: ACZ94567.1 (piopio, isoform D [Drosophila melanogaster])

HSP 1 Score: 58.151 bits (139), Expect = 9.003e-10
Identity = 24/36 (66.67%), Postives = 31/36 (86.11%), Query Frame = 0

Query:    1 MIYPKGLSKNSTCMTEFIELEGTVTYKIPLHSCNTM 36
            MIYPKGLSKNSTC++E+ +  G++ YK+PL SCNTM
Sbjct:   91 MIYPKGLSKNSTCLSEYRDHVGSLRYKLPLRSCNTM 126

HSP 2 Score: 55.4546 bits (132), Expect = 9.005e-9
Identity = 49/131 (37.40%), Postives = 73/131 (55.73%), Query Frame = 0

Query:   42 PVCNPNGENTLKRRKKRQTITELDSNEDSYDLAENDLNVRVFSGYFVRKSDDEQPREEDA----------------NFAIGIAIVGLILIVVVIIAIMILLSKRRRRKDLSTTGSSIYSGPYTNTAYSNSS 156
            P C    + + KR K++      DS E+    A     + VFSG +V ++++    +EDA                 FAI IAI GLIL++ V+ A++ +++ RR  K +S +GSSIYSGPYTNTA+S+SS
Sbjct:  340 PTCQEAPQCSGKRPKRQAAA---DSKEEDGLPA----TIEVFSGLYVNENENANDSDEDAVYKEKTLDDALCVSQRTFAIAIAIAGLILMLAVVAAVLCIMA-RRSTKTVSNSGSSIYSGPYTNTAFSHSS 462

[Close]

BLAST of EMLSAG00000000786 vs. Select Arthropod Genomes
Match: AAM68320.2 (piopio, isoform B [Drosophila melanogaster])

HSP 1 Score: 58.151 bits (139), Expect = 9.003e-10
Identity = 24/36 (66.67%), Postives = 31/36 (86.11%), Query Frame = 0

Query:    1 MIYPKGLSKNSTCMTEFIELEGTVTYKIPLHSCNTM 36
            MIYPKGLSKNSTC++E+ +  G++ YK+PL SCNTM
Sbjct:   91 MIYPKGLSKNSTCLSEYRDHVGSLRYKLPLRSCNTM 126

HSP 2 Score: 55.4546 bits (132), Expect = 9.005e-9
Identity = 49/131 (37.40%), Postives = 73/131 (55.73%), Query Frame = 0

Query:   42 PVCNPNGENTLKRRKKRQTITELDSNEDSYDLAENDLNVRVFSGYFVRKSDDEQPREEDA----------------NFAIGIAIVGLILIVVVIIAIMILLSKRRRRKDLSTTGSSIYSGPYTNTAYSNSS 156
            P C    + + KR K++      DS E+    A     + VFSG +V ++++    +EDA                 FAI IAI GLIL++ V+ A++ +++ RR  K +S +GSSIYSGPYTNTA+S+SS
Sbjct:  340 PTCQEAPQCSGKRPKRQAAA---DSKEEDGLPA----TIEVFSGLYVNENENANDSDEDAVYKEKTLDDALCVSQRTFAIAIAIAGLILMLAVVAAVLCIMA-RRSTKTVSNSGSSIYSGPYTNTAFSHSS 462

[Close]

BLAST of EMLSAG00000000786 vs. Select Arthropod Genomes
Match: gb|KPM11511.1| (Zona pellucida-like domain containing protein 10 [Sarcoptes scabiei])

HSP 1 Score: 49.6766 bits (117), Expect = 8.466e-7
Identity = 20/40 (50.00%), Postives = 31/40 (77.50%), Query Frame = 0

Query:    1 MIYPKGLSKNSTCMTEFIELEGTVTYKIPLHSCNTMNTDV 40
            MIYPKGLS N++CM E+ ++     Y++PL +CNTM+T++
Sbjct:  108 MIYPKGLSTNTSCMMEYFDV-NEFEYRLPLRACNTMSTEL 146

[Close]

BLAST of EMLSAG00000000786 vs. nr
Match: gi|1070591919|ref|XP_018392927.1| (PREDICTED: uncharacterized protein LOC108771995 [Cyphomyrmex costatus])

HSP 1 Score: 90.5077 bits (223), Expect = 1.701e-18
Identity = 57/139 (41.01%), Postives = 77/139 (55.40%), Query Frame = 0

Query:   38 TDVPPVCNPNGENTLKRRKKRQTITELDSNEDSYDLAENDLNVRVFSGYFVRKSDDEQPREEDAN--------------------FAIGIAIVGLILIVVVIIAIMILLSKRRRRKDLSTTGSSIYSGPYTNTAYSNSS 156
            ++ PP+CN    +  +RR+      E    ED   L      + V+SG +V ++ D   + + +N                    FAIGIA  GLIL++ V+ AI+ILL+KRR  K LSTTGSSIYSGPYTNTAYS+SS
Sbjct:  283 SNTPPLCN----SIARRRRDTANAHETKGIED---LDGTPATIEVYSGLYVNEASDVSSKSDFSNDVFRERALDDPNTICISQRSFAIGIAAAGLILMLAVVAAILILLAKRRH-KSLSTTGSSIYSGPYTNTAYSHSS 413

[Close]

BLAST of EMLSAG00000000786 vs. nr
Match: gi|1009414539|gb|KYN33390.1| (Cuticlin-1 [Trachymyrmex septentrionalis])

HSP 1 Score: 90.5077 bits (223), Expect = 2.027e-18
Identity = 57/139 (41.01%), Postives = 78/139 (56.12%), Query Frame = 0

Query:   38 TDVPPVCNPNGENTLKRRKKRQTITELDSNEDSYDLAENDLNVRVFSGYFVRKSDDEQPREEDAN--------------------FAIGIAIVGLILIVVVIIAIMILLSKRRRRKDLSTTGSSIYSGPYTNTAYSNSS 156
            ++ PP+CN    + ++RR+      E    ED   L      + V+SG +V ++ D   + + +N                    FAIGIA  GLIL++ V+ AI+ILL+KRR  K LSTTGSSIYSGPYTNTAYS+SS
Sbjct:  350 SNTPPLCN----SIVRRRRDTANAHEAKGVED---LDGTPATIEVYSGLYVNEASDVSSKSDFSNDVFRERALDDPNTICISQRSFAIGIAAAGLILMLAVVAAILILLAKRRH-KSLSTTGSSIYSGPYTNTAYSHSS 480

[Close]

BLAST of EMLSAG00000000786 vs. nr
Match: gi|759056962|ref|XP_011337724.1| (PREDICTED: uncharacterized protein LOC105279563 [Cerapachys biroi])

HSP 1 Score: 89.7373 bits (221), Expect = 2.967e-18
Identity = 57/139 (41.01%), Postives = 79/139 (56.83%), Query Frame = 0

Query:   38 TDVPPVCNPNGENTLKRRKKRQTITELDSNEDSYDLAENDLNVRVFSGYFVRKSDDEQPREE------------DAN--------FAIGIAIVGLILIVVVIIAIMILLSKRRRRKDLSTTGSSIYSGPYTNTAYSNSS 156
            ++ PP+CN    +  +RR+      E+   E    L      + V+SG +V ++ D  P+ +            D N        FAIGIAI GLIL++ V+ AI++LL+KRR  K +STTGSSIYSGPYTNTAYS+SS
Sbjct:  284 SNTPPLCN----SIARRRRDAANDEEVKGVEG---LDGTPATIEVYSGLYVNEASDVGPKSDFSDDVLRERAIDDPNTICISQRSFAIGIAIAGLILMLAVVAAILVLLAKRRH-KSVSTTGSSIYSGPYTNTAYSHSS 414

[Close]

BLAST of EMLSAG00000000786 vs. nr
Match: gi|1009382305|gb|KYN05042.1| (Cuticlin-1 [Cyphomyrmex costatus])

HSP 1 Score: 89.3521 bits (220), Expect = 3.335e-18
Identity = 57/136 (41.91%), Postives = 75/136 (55.15%), Query Frame = 0

Query:   41 PPVCNPNGENTLKRRKKRQTITELDSNEDSYDLAENDLNVRVFSGYFVRKSDDEQPREEDAN--------------------FAIGIAIVGLILIVVVIIAIMILLSKRRRRKDLSTTGSSIYSGPYTNTAYSNSS 156
            PP+CN    +  +RR+      E    ED   L      + V+SG +V ++ D   + + +N                    FAIGIA  GLIL++ V+ AI+ILL+KRR  K LSTTGSSIYSGPYTNTAYS+SS
Sbjct:  237 PPLCN----SIARRRRDTANAHETKGIED---LDGTPATIEVYSGLYVNEASDVSSKSDFSNDVFRERALDDPNTICISQRSFAIGIAAAGLILMLAVVAAILILLAKRRH-KSLSTTGSSIYSGPYTNTAYSHSS 364

[Close]

BLAST of EMLSAG00000000786 vs. nr
Match: gi|769862613|ref|XP_011643124.1| (PREDICTED: uncharacterized protein LOC105430964 [Pogonomyrmex barbatus])

HSP 1 Score: 89.7373 bits (221), Expect = 3.366e-18
Identity = 58/139 (41.73%), Postives = 78/139 (56.12%), Query Frame = 0

Query:   38 TDVPPVCNPNGENTLKRRKKRQTITELDSNEDSYDLAENDLNVRVFSGYFVRKSDDEQPREE------------DAN--------FAIGIAIVGLILIVVVIIAIMILLSKRRRRKDLSTTGSSIYSGPYTNTAYSNSS 156
            ++ PP+CN         R++R T  EL   E    L      + V+SG +V ++ D   + +            D N        FAIGIAI GLIL++ V+ AI++LL+KRR  K +STTGSSIYSGPYTNTAYS+SS
Sbjct:  282 SNTPPLCNSIA------RRRRDTANELKGVEG---LDGTPATIEVYSGLYVNEASDVGSKADFSDDVFRERAIDDPNTICISQRSFAIGIAIAGLILMLAVVAAILVLLAKRRH-KSVSTTGSSIYSGPYTNTAYSHSS 410

[Close]

BLAST of EMLSAG00000000786 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold75_size407189-snap-gene-2.16 (protein:Tk10131 transcript:maker-scaffold75_size407189-snap-gene-2.16-mRNA-1 annotation:"cuticlin- partial")

HSP 1 Score: 100.138 bits (248), Expect = 1.065e-25
Identity = 78/140 (55.71%), Postives = 96/140 (68.57%), Query Frame = 0

Query:   39 DVPPVCNPNGENTLKRRKKRQTITELDSNEDSYDLAENDLNVRVFSGYFVRKS---DDEQPREEDA-------------------NFAIGIAIVGLILIVVVIIAIMILLSKRRRRKDLSTTGSSIYSGPYTNTAYSNSS 156
            + PP+C+ NGENTLKRR+KRQTI   ++    YD   ++L V+VFSG +V ++   D+E   EED                    +FAI IAI GLILI++VIIAI+ LLSKRRRRKDLSTTGSSIYSGPYTNTAYS+SS
Sbjct:  302 ETPPICDANGENTLKRRRKRQTIEVDETQGVLYDPDRDNLKVKVFSGLYVNEASEYDEENFTEEDIADEIAARAHDPSRICFPQRDFAIAIAIAGLILILIVIIAILCLLSKRRRRKDLSTTGSSIYSGPYTNTAYSHSS 441

HSP 2 Score: 66.2402 bits (160), Expect = 9.806e-14
Identity = 28/40 (70.00%), Postives = 34/40 (85.00%), Query Frame = 0

Query:    1 MIYPKGLSKNSTCMTEFIELEGTVTYKIPLHSCNTMNTDV 40
            +IYPKGLSKNS+CM+E+I  E  + Y IPLHSCNTM+TDV
Sbjct:   87 LIYPKGLSKNSSCMSEYIRQEDDIVYIIPLHSCNTMSTDV 126

The following BLAST results are available for this feature:

BLAST of EMLSAG00000000786 vs. GO
BLAST of EMLSAG00000000786 vs. C. finmarchicus
BLAST of EMLSAG00000000786 vs. L. salmonis peptides
BLAST of EMLSAG00000000786 vs. SwissProt
BLAST of EMLSAG00000000786 vs. Select Arthropod Genomes
BLAST of EMLSAG00000000786 vs. nr
BLAST of EMLSAG00000000786 vs. Tigriopus kingsejongenis genes

BLAST of EMLSAG00000000786 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO)
Total hits: 1


Match Name	E-value	Identity	Description
-	3.778e-9	66.67	symbol:pio "piopio" species:7227 "Drosophila melan...	[more]

BLAST of EMLSAG00000000786 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA)
Total hits: 4


Match Name	E-value	Identity	Description
gi\|592931630\|gb\|GAXK01026923.1\|	1.534e-13	75.00	TSA: Calanus finmarchicus comp19504_c1_seq3 transc...	[more]
gi\|592931632\|gb\|GAXK01026921.1\|	1.579e-13	75.00	TSA: Calanus finmarchicus comp19504_c1_seq1 transc...	[more]
gi\|592931629\|gb\|GAXK01026924.1\|	1.731e-13	75.00	TSA: Calanus finmarchicus comp19504_c1_seq4 transc...	[more]
gi\|592931631\|gb\|GAXK01026922.1\|	1.783e-13	75.00	TSA: Calanus finmarchicus comp19504_c1_seq2 transc...	[more]

BLAST of EMLSAG00000000786 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self)
Total hits: 1


Match Name	E-value	Identity	Description
EMLSAP00000000786	5.833e-113	100.00	pep:novel supercontig:LSalAtl2s:LSalAtl2s112:13786...	[more]

BLAST of EMLSAG00000000786 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt)
Total hits: 0


Match Name	E-value	Identity	Description

BLAST of EMLSAG00000000786 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods)
Total hits: 13


Match Name	E-value	Identity	Description
ACZ94567.1	9.003e-10	66.67	piopio, isoform D [Drosophila melanogaster]	[more]
AAM68320.2	9.003e-10	66.67	piopio, isoform B [Drosophila melanogaster]	[more]
gb\|KPM11511.1\|	8.466e-7	50.00	Zona pellucida-like domain containing protein 10 [...	[more]

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BLAST of EMLSAG00000000786 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017))
Total hits: 25


Match Name	E-value	Identity	Description
gi\|1070591919\|ref\|XP_018392927.1\|	1.701e-18	41.01	PREDICTED: uncharacterized protein LOC108771995 [C...	[more]
gi\|1009414539\|gb\|KYN33390.1\|	2.027e-18	41.01	Cuticlin-1 [Trachymyrmex septentrionalis]	[more]
gi\|759056962\|ref\|XP_011337724.1\|	2.967e-18	41.01	PREDICTED: uncharacterized protein LOC105279563 [C...	[more]
gi\|1009382305\|gb\|KYN05042.1\|	3.335e-18	41.91	Cuticlin-1 [Cyphomyrmex costatus]	[more]
gi\|769862613\|ref\|XP_011643124.1\|	3.366e-18	41.73	PREDICTED: uncharacterized protein LOC105430964 [P...	[more]

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BLAST of EMLSAG00000000786 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins)
Total hits: 1


Match Name	E-value	Identity	Description
maker-scaffold75_size407189-snap-gene-2.16	1.065e-25	55.71	protein:Tk10131 transcript:maker-scaffold75_size40...	[more]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
LSalAtl2s112	supercontig	LSalAtl2s112:137864..144339 -

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
ensembl	2013-09-26 .965016
Blast vs. GO	2014-04-02
TblastN vs C. finmarchicus TSA	2014-05-09
Blastp vs. self	2014-05-10
Blastp vs. SwissProt	2017-02-10
Blastp vs. Selected Arthropods	2017-02-20
Blastp vs. NR (2/2017)	2017-02-20
Blastp vs. Tigriopus kingsejongensis proteins	2018-04-18

Properties


Property Name	Value
Logic name	ensemblgenomes
Description	maker-LSalAtl2s112-augustus-gene-1.7
Biotype	protein_coding
Evidence	IEA
Note	Cuticlin-1, partial [Zootermopsis nevadensis]

Cross References

External references for this gene


Database	Accession
Ensembl Metazoa (gene)	EMLSAG00000000786 (primary cross-reference)

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
EMLSAT00000000786	EMLSAT00000000786-696633	Lepeophtheirus salmonis	mRNA

Sequences

The following sequences are available for this feature:

gene from alignment at LSalAtl2s112:137864..144339-

gene from alignment at LSalAtl2s112:137864..144339-

Legend: mRNA

Hold the cursor over a type above to highlight its positions in the sequence below.

>EMLSAG00000000786-683552 ID=EMLSAG00000000786-683552|Name=EMLSAG00000000786|organism=Lepeophtheirus salmonis|type=gene|length=6476bp|location=Sequence derived from alignment at LSalAtl2s112:137864..144339- (Lepeophtheirus salmonis)
GTTGTCAAGGATATTCGTATCTTCTGCAACTCTCATGACATCACACTGAA
TATAAAAACTGTGGATAATTACTTTAACGGAATGATTTATCCAAAAGGAC
TCTCTAAGAACTCAACTTGCATGACAGAATTTATTGAATTGGAAGGAACA
GTCACTTATAAAATACCTCTTCATTCCTGCAACACTATGAATACTGATGT
CGTAAGTTAAATATTTATTCGATGCAAGATAATAAATTATGTTACTGACT
AAATCAGTTCAACAAACTTTCATGTATGAATACATGGAGCGTAAATTAAA
AGTTAGCAGATTGGAACGTTTGTTTGTATTTTTTACATGAGATGAAAGGT
TGCGTGTCTCTAAATAAAATAATACTTCCGTGTTTTTGTTTCGTACAAAT
TGGGATTTCTGTGCAAGTTGTAACTTGTAAGCGTGGATTGTACTAGTTAA
AACTTCTAAATCTCATTACGCTTTACATAATTAAATTTCACCCATTTTAA
TTAGCATATATTTTTTGATGCTATCAATTCATTTTGACTTATTAAAAAGC
CATTGGTACATAATATGGTTACAATTTTGTATAAATGTATTGCACGTCAT
TGTAAAAACTATCTTGAATAAAAGAGNAATCCATTTTTTTTTCTTGAGAA
AATAGTTATAACCTGTTCTATTGTTGACAAATTACATAAGTTAAATATAA
ATATATATATATGTATTGATAAATATTTATTATTATTTTAGAACACAGGT
ATCGAGTACTTCAATACCATAGTTGTTCAACCTCATCGAAAACTAGTGAC
GAATCAAGGAAGAGGTTACCATATACGATGCCGATACCAAACCCAGGAAA
GACTTTTATTAACCAGTCCTATATCTAAGTGAGTATTTAATATTTGGATC
TTCAAAATTAAATATATGTGATAAGGAATTGTTCCTAAAATTGGCTGTCT
AAAAATGCTGGTTAATTTTTAAAAAGTTTGCTTTGTAAAAAAAAAATATT
TTAATATCACTATGTTTTAAAAAATTCATCAAAATCATAATAATAGGTTA
ATTTTACAAGCCGAAAAAAATTATCATTTTACATTTGACACGGCATTACC
TCAATAATGCATAAATATAGATTGTATTTGGTTGTTTAGTGTTTATTTAT
CTGATTTTATCAGTTTTCTAACCATTGATTGGTTAAATTATAATTTGATT
TTTTTTTATGCTGTGAACAATTCCTGACAATGATAATTAAATAATAAATT
GCATTATTGGGAAGAATTTGCTTCATACAAAATTGATATAAGCTCTTTTT
TATGCTTTTTTGAAGTAAAGGTTGCGTTATATATTAAAAGTAATGGCGTA
TTGAGTTTTACATTGTTAACTATTTTGGTCAAATATGTTAATTTTTTTTA
TAATAAATGAAATTTAAATATGAAAAATCAGGATAAGAGCTATTTTTCGA
CTCTAAAGTCACTTTTATTTTAAAAATATCATATGGACCTTTTTATTTGT
CCCAAAAATAATGAAAGTTCTTTCTTAATAAATAGTTTGGGTTATTTTTA
ATCGAATGATCTTGTTTTGGTTTTTTAATTACCTTTTGAAAAGATCTAGC
ATTTTTTGGTTCCTTTTCCTAGAATGTATGGATAAATTAGTTTAAAGACG
CTTTTTTAGTCGCACCGGCCTTGGGAATAATGTCAAATCCTACGCAAAAT
TAACCATTTCATTAAATAACTACTTTTAATAGAAAATAAAAANNGATTTA
GTTCAAAAGTACAATCATCTAAACCGGATCTCAAGGAACTAAGAATATTT
CCCTGTTACAAAAGAAATCKACCTCATAGAATTATATTCAAATATATAAA
TTATTCAGGATTTCCGTAAATGTCCACTATAAACGATTATGCGTATTAAA
CGTAGACAGAACTGAGCTCTATTTCAATATAACTTCAATGAAGTTGATAA
TAGGTATCTCTAACAGTGTATTATTATTAAAACATTATTTTTTTCAAATA
TAACTTTGTATTTGTGGGCATCCTTTTGTAACTCACATACAAATAAAATA
AGTTGTACATCCCACTTTTGTTTAAAGGTTTATCTATGTAGGGAAAAACA
TTAAAAATCATATTATATATAAATATTTTTTCAAGGTCAATTTGCAGAAT
TTAGCAAATATCCCACGTATCCCACGCAAAGTCTTTTAATTAACTGAATG
CATTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACAG
GGCATATGTGTGGTGTGTATTTGAAATAATCAAGGTCGTACTTTAATCAC
GCAGGCGGTTCAATGATTAATAGAATTGGAACTGTCAAGCTTGAACTTAG
ACCAAATAATTCTGTTTATTGGTTTACGTTCTATAAATTTACAAAATGTC
ATTTTATGAATGGCCGTTATTTCTTCATACCTAAAATTGCCGAGTTGTCT
AAAAAGTCGCCTAGCAATTTAAATTTGAGATTTTTAATGATGTTTTATTT
ATCTTCTAAGATATTAATTTTAAAAAAGGACAAATTATAATGATATACAT
ATTAAATATAATTATAAACATACTTATTTTTTTAAAATCAAAATAAATTA
AGTTTTGTTTTTTAAAATTGTTTAATAAAAAATCATTTTCATAAAATAAG
ATAGTTTAATACCAATTAAAACTGAAAAGGACATCCAGATGTGTATTTTG
GGAAAAAATGTAACTCCAAATTTTGTTTATAATCAGTGTAAACCGATTGT
TGAACCATGATCGAAACCAATGTAATTATGGAACCTGAATCGGGTACAAC
TTTGACAGAAAGTGTTTATGGTATATTTAACATGAGTTCTTCCAAGATTA
CATTGACTCTCATTTCTTTTCTAAAGATAAAGACCAAAATGAGCCGAGAA
TAAGAAAAATAGTGTTATTAGGTATATCAGTACTACGGCGTTGGCGTATT
TAAAACGGAATTATACTAAGCATCTAGGCATACAATGAAACTGATACTTG
AAGATCCACTACGACATAAAAAATAGCTTCCTGATGACGTGACCCATCAA
ATGTATGATCCAACATACAACATCCCAAACAAAATTTCCAAATTAAATCA
AAATACTCTCCTATTAATATTTTTTTTGTTCTATATTTTAAGTCGATAGA
AGTATCTATAATTACGGAAATATTCAGATCTATATTTGTACCAAAACTGG
TTCAAAAATATTAGGAACAAAACAACACTTATACTAATAATAGTATAAAA
TTGAGCCTTGAATGATACATTTTGTAAAACTGGATTCGAAAAGGCCGAAG
TCCATTATATGAAATTTGAAATTTTATAATAGATATTGGGAAGAGTTGAT
TAATAATGGAAACAATATTTAACTGTGTCCCTAAAATAACCAAAGAAAAC
AGAAATATATTTGCTTAATCTTTGTAGTTTGTTTATATACCCCAAGATAA
TGGTGCCACCCTGCGTTCATTGTTTATTATTAGCATTTTGAATACTTATT
TGTATATTACAACGGCATTCTATGTACATTTGCGCCATCTTGCGCATACC
CTATTTTTATGAACATTCAAAGCGAGGATTTTGTTAAATTATCTTTCTTC
TCATAACTATTCTACTCTAATAAATAGCCCTTAGTTGATCAAAAAAAAAA
TGAGTATACGTTCCAGGAATAGATTATTCTTTGCCCTATATCATTATTTA
AAGATTTAATCTTCTCTAATAGCTCMCTCGGAACAACTSCTYCCCCAGAC
ACTACCACAATGCCAGGAACGCATATGAAAATTTACCAAGGAGAACCCTC
TGATGGAGCTATTGCAGAGAGTGTCAAAATTGGTGATTTGCTTACACTGG
TTGTATCTATTGATGATCAAGAAATCTACGGAATGCAAGTGACAGAGTGT
CTTGTAAGAGATGGACTTGGATGGTCTNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNCTTTRTTTRTTTTTRTTTTTTTTTTTTTTTAAAGGGAACCT
ATWTWTATATARTTATWTTCRTTWGTTGTCCAGTTMWTTWTGAAATCATG
GGCCCAATGGAGTACAGCACCGAAAAAACTACTGCCTATGTGCATTTCCA
TGCACACAAGTTTCCATACGCACCTTCAGTATATTATCAATGTAACATTA
GATTGTGCATTAGACACGCCGGTGGCTGTGATAATGTGGTGAGTCTGAAT
TTATTAATTACCTACACAAGTTATAAAAATCTTACTTGCATGAAAGTTTA
TTTATTTTTATCTTTTGTAACATTTTATGTTGCTTTAAATAGTAATTTTT
TATACATGCGATCATTGAAGCCCAAGAAATGCAATTTAAAGGTTTTGACT
TTTCATTTTCTTTTACCCCAAACGGTGTATTTATTTAAAACTTAAATGGT
TAAAGTTTTGTTTAAAAAAGAGTATCAGGTCTAATTCATCAGTAATATTT
ATATGATTTGCGTTAAGGGGTAAAAGTTGAAAAGTGTTTTTTTTGTTGTT
GAATTGTGTTATAGATCTTTTTTTATATGTTTACAAAATGAACTCACAAA
TTTTATTTCCCTAGCCACCCGTCTGCAATCCAAACGGTGAAAATACACTT
AAGAGAAGAAAGAAACGTCAAACCATAACAGAATTAGATTCAAATGAAGA
TTCATACGATCTTGCAGAAAATGATTTGAATGTCAGAGTCTTTTCAGGAT
ATTTTGTCAGAAAAAGTGATGATGAACAGCCAAGAGAGGAAGATGCTGTA
AGTTAGAGTGCATTGACTAAGGTTGTGTAGATCCTAAATATGGTTCGTAG
AAGTGTCCAATCCCACGTGCCGGCTTGCCCTTGTACTGGGTCTTTCAAAA
TATCCCAAAAGTGTAGACCCCCTCCCCCTACGTGGTATCATTTTCACTAC
GTATAACTTATACTTATTACTTATATTAGAGGACGCTTTGTCCTACTTTA
TTCGGGAAAAAATTTGGAAGTAGTTACTTATCTATAAATAATTTTTTAGT
TATAGATTTTCAATTATGTTTTGTTAGAAAACTTTGTAAAATAAATTAAA
TTTCTTGGAGTATTCACTTCGTCCCCCAGATCTTTTGATATTGTAGATAG
TACTAAAAAGTATAGTCTCATATATTTATATATTAGCAATATTAGCTGAC
AGAAAAGAAAGGGTTCTTCTCCCTTATTCACTTTATAGCTTAATAACTCA
AACTATTATTCATGATTTTTACTAATTTAAGGCAGTAATCACAGTTTGGT
TATTATTTATTTTTTTTTTNNNTACTAAAAAGTATAGTCTCATATATTTA
TATATTAGCAATATTAGCTGACAGAAAAGAAAGGGTTCTTCTCCCTTATT
CACTTTATAGCTTAATAACTCAAACTATTATTCATGATTTTTACTAATTT
AAGGCAGTAATCACAGTTTGGTTATTATTATTTTTTTTTTGGGGGGGGGG
GGGCGCTWCTTTTAGTAAGGTCGAGCTTTATGWTTAACTCGAAACATAGA
CTGACAAAAGACGAAATAGAAATTTGAAAAAAAACATGCCATTTAGATAT
TTTCATAGAGAAAGAAATATTACTTTATCTATGAATATGATTTTATTAAA
AAAAAATTGAATTGAAGTCCTTAATTTATATAAAGTAATGTAAAAATTAA
TATACAAAGTAATACCCTTATACGAGTTCATTATATGTCAAATCAACTGC
TTTAAATCAATAAAGAGACCATTCATAAAAATGAATGAAAACATTTTTAA
CAAAAAAAACTCTGTATCTTTGTATATTCCTAAATGCCCGACTTGAGTGA
CTATGGATGACTTACTACTACCGAAAATGTTATTGAAGAAGAGTCCAAAC
TAGCTCCCATTAAGTAAGGCCCTGTAATATGATAGTAAAGAACCTCAGTT
TACCACAAGAATTAGTTTGGTAAAACTTCAAGTATTTCTCTGGTACGATA
TTAGTTTGTCATTATTCTTATTTTAGACCTTATTAAAACATTTATTATTG
TAATAAAAATTGTGGAAGATGTATTAATAATTATGTGATTTAGCAAAAAT
GTTCTAAATCTATATGATAGAGTTAGTGTCCTATTCAGATGTGTCCATAA
AATTTTGGGATGGGACCTGACAGAAACTCAAAAATTTAGAAACTCCAACA
TCCTTAGCATTTTCTAAATTATTTGGACTAACTATTTAAATTGAAATATC
TTTATTTTTATAGCCACAACGCGTTCATCAACCTGACAAGATATGTTTTC
CTCAAAAGAACTTTGCAATTGGAATTGCAATTGTTGGACTTATACTCATA
GTGGTTGTCATCATTGCGATTATGATCCTTCTCTCCAAGAGAAGGAGACG
AAAGGACTTATCAACCACTGGCTCTTCCATTTATAGTGGACCATATACTA
ATACTGCCTATTCAAATAGTAGTTAA

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