EMLSAG00000000792, EMLSAG00000000792-683558 (gene) Lepeophtheirus salmonis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of EMLSAG00000000792 vs. C. finmarchicus
Match: gi|592912474|gb|GAXK01045901.1| (TSA: Calanus finmarchicus comp199420_c0_seq1 transcribed RNA sequence) HSP 1 Score: 190.274 bits (482), Expect = 1.244e-58 Identity = 101/191 (52.88%), Postives = 122/191 (63.87%), Query Frame = 0 Query: 1 MNQIFSIIYLCVIVSVLIPSVPAPVPRCSPFIIINKLAEFSNLVSDSNPYFPVPPCEYGGPLEAIRAGDYEAXFVLARPELVPRHNFYELVWFLKFGAERLGRILRGEEKFIADQNILREGYQHYTPYVRTRQIGHDTFRDPIIINDKRLYNRIVGSRLRWLFADK-----------GITRRHEGQKRISR 180 M F + L +++ + P VPAPVPRCSPFIIINKL E+++L SDSN YFPV PCEYGGP A+ GDY A F+L PE VPRHN YE VWFLK G R+ R++ G E F AD NIL EGYQHYTP +RT Q+GH T R P II+D + VG ++R LF + G RR E + R SR Sbjct: 125 MKTHFPSLVLGLLL-ISFPLVPAPVPRCSPFIIINKLVEWTSLWSDSNSYFPVGPCEYGGPFRALEEGDYNAVFLLDEPEKVPRHNIYEFVWFLKTGLTRMKRMMLGLEPFQADFNILTEGYQHYTPSIRTTQLGHGTERRPEIIDDPDTFVDFVGGKIRSLFTEGPDLQRTRYTPVGPLRRKEIRNRKSR 694
BLAST of EMLSAG00000000792 vs. C. finmarchicus
Match: gi|592824247|gb|GAXK01130321.1| (TSA: Calanus finmarchicus comp70139_c0_seq1 transcribed RNA sequence) HSP 1 Score: 134.035 bits (336), Expect = 1.091e-37 Identity = 65/125 (52.00%), Postives = 80/125 (64.00%), Query Frame = 0 Query: 23 APVPRCSPFIIINKLAEFSNLVSDSNPYFPVPPCEYGGPLEAIRAGDYEAXFVLARPELVPRHNFYELVWFLKFGAERLGRILRGEEKFIADQNILREGYQHYTPYVRTRQIGHDTFRDPIIIND 147 APVPRCSP IINK+ E +L SD NPYFPV CEYGGP++AI AGD+ + F+L P+ +P HN YEL W +K G RL RIL GEE+F IL EGY+ R +G T RD I++ Sbjct: 94 APVPRCSPLFIINKVPESMSLTSDMNPYFPVAECEYGGPIQAILAGDFNSVFILDEPDKIPLHNLYELTWIVKKGWPRLQRILAGEEEFKFSPEILLEGYKGDQKTPRLDHLGQSTSRDKTKIDE 468
BLAST of EMLSAG00000000792 vs. C. finmarchicus
Match: gi|592841163|gb|GAXK01116381.1| (TSA: Calanus finmarchicus comp295798_c0_seq1 transcribed RNA sequence) HSP 1 Score: 131.339 bits (329), Expect = 3.636e-35 Identity = 61/151 (40.40%), Postives = 96/151 (63.58%), Query Frame = 0 Query: 12 VIVSVLIPSVP--APVPRCSPFIIINKLAEFSNLVSDSNPYFPVPPCEYGGPLEAIRAGDYEAXFVLARPELVPRHNFYELVWFLKFGAERLGRILRGEEKFIADQNILREGYQHYTPYVRTRQIGHDTFRDPIIINDKRLYNRIVGSRLR 160 ++ L+P +P AP+P CSPFI++NK+ E +NL+SD +PY+P+PPC +GGPL+A+ GD + F+ + VPRH +YEL W L G R + G+ + +IL EGY+H T RT Q GH + R+P + + K++++++V R Sbjct: 206 LLALALVPPIPCLAPMPPCSPFILMNKMIESTNLLSDIHPYYPIPPCPHGGPLQALSKGDINSVFI----KDVPRHLWYELSWLLAVGLPRKWEAITGKYPVKVNMDILTEGYKHRTREPRTEQFGHSSSRNPDLFHQKKIFDQLVARNFR 646
BLAST of EMLSAG00000000792 vs. C. finmarchicus
Match: gi|592831585|gb|GAXK01125959.1| (TSA: Calanus finmarchicus comp311264_c0_seq2 transcribed RNA sequence) HSP 1 Score: 95.5153 bits (236), Expect = 1.183e-23 Identity = 45/81 (55.56%), Postives = 56/81 (69.14%), Query Frame = 0 Query: 82 VPRHNFYELVWFLKFGAERLGRILRGEEKFIADQNILREGYQHYTPYVRTRQIGHDTFRDPIIINDKRLYNRIVGSRLRWL 162 +P HN YE VW LK G R+ RIL G+E FI D ILREG+QH TPYVRT Q+GH T R P II++K Y ++GS++ L Sbjct: 199 IPLHNLYEFVWLLKTGFPRMVRILAGKEPFIYDTKILREGFQHSTPYVRTGQLGHGTKRRPEIIDNKNTYKAVLGSKVGQL 441
BLAST of EMLSAG00000000792 vs. C. finmarchicus
Match: gi|592831586|gb|GAXK01125958.1| (TSA: Calanus finmarchicus comp311264_c0_seq1 transcribed RNA sequence) HSP 1 Score: 96.6709 bits (239), Expect = 1.954e-23 Identity = 46/86 (53.49%), Postives = 59/86 (68.60%), Query Frame = 0 Query: 77 ARPELVPRHNFYELVWFLKFGAERLGRILRGEEKFIADQNILREGYQHYTPYVRTRQIGHDTFRDPIIINDKRLYNRIVGSRLRWL 162 ++P +P HN YE VW LK G R+ RIL G+E FI D ILREG+QH TPYVRT Q+GH T R P II++K Y ++GS++ L Sbjct: 401 SQPLNIPLHNLYEFVWLLKTGFPRMVRILAGKEPFIYDTKILREGFQHSTPYVRTGQLGHGTKRRPEIIDNKNTYKAVLGSKVGQL 658
BLAST of EMLSAG00000000792 vs. C. finmarchicus
Match: gi|592831584|gb|GAXK01125960.1| (TSA: Calanus finmarchicus comp311264_c1_seq1 transcribed RNA sequence) HSP 1 Score: 93.2041 bits (230), Expect = 8.331e-23 Identity = 45/75 (60.00%), Postives = 58/75 (77.33%), Query Frame = 0 Query: 10 LCVIVSVLIPS-VPAPVPRCSPFIIINKLAEFSNLVSDSNPYFPVPPCEYGGPLEAIRAGDYEAXFVLARPELVP 83 L ++V + +PS PAPVPRCSPFI INKLAE++N+ SDSNPYFPVPPCEYGGP+ A+ GD + V ++P +P Sbjct: 2 LILLVFLSLPSPTPAPVPRCSPFIFINKLAEWTNIWSDSNPYFPVPPCEYGGPVAALTKGDIRSVLVTSQPLNIP 226
BLAST of EMLSAG00000000792 vs. C. finmarchicus
Match: gi|592824246|gb|GAXK01130322.1| (TSA: Calanus finmarchicus comp70139_c0_seq2 transcribed RNA sequence) HSP 1 Score: 69.707 bits (169), Expect = 1.920e-14 Identity = 34/80 (42.50%), Postives = 47/80 (58.75%), Query Frame = 0 Query: 68 GDYEAXFVLARPELVPRHNFYELVWFLKFGAERLGRILRGEEKFIADQNILREGYQHYTPYVRTRQIGHDTFRDPIIIND 147 GD+ + F+L +P+ +P HN YEL W +K G RL RIL GEE+F IL EGY+ R + +G T RD I++ Sbjct: 1 GDFNSVFILDQPDKIPLHNLYELTWIVKKGWPRLQRILAGEEEFKFSPEILLEGYKGDQKTPRLKHLGQSTSRDKTKIDE 240
BLAST of EMLSAG00000000792 vs. C. finmarchicus
Match: gi|592894089|gb|GAXK01064286.1| (TSA: Calanus finmarchicus comp183056_c0_seq2 transcribed RNA sequence) HSP 1 Score: 29.6462 bits (65), Expect = 4.752e+0 Identity = 19/56 (33.93%), Postives = 26/56 (46.43%), Query Frame = 0 Query: 76 LARPELVPRHNFYELVWFLKFGAERLGRILRGEEKFIADQNILREGYQHYTPYVRT 131 L RP P E VW L FG ER I RG++ + + L GY+ P + + Sbjct: 284 LGRPAFFP---LPEFVWNLVFGEERAVMITRGQK--VEPRRTLESGYKFLFPTIES 436
BLAST of EMLSAG00000000792 vs. C. finmarchicus
Match: gi|592894090|gb|GAXK01064285.1| (TSA: Calanus finmarchicus comp183056_c0_seq1 transcribed RNA sequence) HSP 1 Score: 29.6462 bits (65), Expect = 4.934e+0 Identity = 19/56 (33.93%), Postives = 26/56 (46.43%), Query Frame = 0 Query: 76 LARPELVPRHNFYELVWFLKFGAERLGRILRGEEKFIADQNILREGYQHYTPYVRT 131 L RP P E VW L FG ER I RG++ + + L GY+ P + + Sbjct: 284 LGRPAFFP---LPEFVWNLVFGEERAVMITRGQK--VEPRRTLESGYKFLFPTIES 436
BLAST of EMLSAG00000000792 vs. L. salmonis peptides
Match: EMLSAP00000000792 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1130:7195:13371:1 gene:EMLSAG00000000792 transcript:EMLSAT00000000792 description:"maker-LSalAtl2s1130-augustus-gene-0.6") HSP 1 Score: 392.504 bits (1007), Expect = 2.817e-140 Identity = 192/192 (100.00%), Postives = 192/192 (100.00%), Query Frame = 0 Query: 1 MNQIFSIIYLCVIVSVLIPSVPAPVPRCSPFIIINKLAEFSNLVSDSNPYFPVPPCEYGGPLEAIRAGDYEAXFVLARPELVPRHNFYELVWFLKFGAERLGRILRGEEKFIADQNILREGYQHYTPYVRTRQIGHDTFRDPIIINDKRLYNRIVGSRLRWLFADKGITRRHEGQKRISREDQTDITSHRLD 192 MNQIFSIIYLCVIVSVLIPSVPAPVPRCSPFIIINKLAEFSNLVSDSNPYFPVPPCEYGGPLEAIRAGDYEAXFVLARPELVPRHNFYELVWFLKFGAERLGRILRGEEKFIADQNILREGYQHYTPYVRTRQIGHDTFRDPIIINDKRLYNRIVGSRLRWLFADKGITRRHEGQKRISREDQTDITSHRLD Sbjct: 1 MNQIFSIIYLCVIVSVLIPSVPAPVPRCSPFIIINKLAEFSNLVSDSNPYFPVPPCEYGGPLEAIRAGDYEAXFVLARPELVPRHNFYELVWFLKFGAERLGRILRGEEKFIADQNILREGYQHYTPYVRTRQIGHDTFRDPIIINDKRLYNRIVGSRLRWLFADKGITRRHEGQKRISREDQTDITSHRLD 192
BLAST of EMLSAG00000000792 vs. L. salmonis peptides
Match: EMLSAP00000012106 (pep:novel supercontig:LSalAtl2s:LSalAtl2s868:259044:273007:1 gene:EMLSAG00000012106 transcript:EMLSAT00000012106 description:"augustus-LSalAtl2s868-processed-gene-1.7") HSP 1 Score: 156.377 bits (394), Expect = 9.304e-47 Identity = 71/99 (71.72%), Postives = 81/99 (81.82%), Query Frame = 0 Query: 5 FSIIYLCVIVSVLIPSVPAPVPRCSPFIIINKLAEFSNLVSDSNPYFPVPPCEYGGPLEAIRAGDYEAXFVLARPELVPRHNFYELVWFLKFGAERLGR 103 S+ Y I+ + VPAPVPRCSPFIIINKLAEFSN++SDSNPYFPVPPCEYGGP AIR GDYE FVLARP+L+PRHNFYEL+WF+K+GA R R Sbjct: 144 LSLFYFLSILHL----VPAPVPRCSPFIIINKLAEFSNVLSDSNPYFPVPPCEYGGPGNAIRYGDYEXVFVLARPDLIPRHNFYELIWFMKYGASRFVR 238
BLAST of EMLSAG00000000792 vs. nr
Match: gi|961376506|gb|ALS04997.1| (hypothetical protein [Calanus sinicus]) HSP 1 Score: 140.969 bits (354), Expect = 2.214e-39 Identity = 69/124 (55.65%), Postives = 83/124 (66.94%), Query Frame = 0 Query: 23 APVPRCSPFIIINKLAEFSNLVSDSNPYFPVPPCEYGGPLEAIRAGDYEAXFVLARPELVPRHNFYELVWFLKFGAERLGRILRGEEKFIADQNILREGYQHYTPYVRTRQIGHDTFRDPIIIN 146 APVPRCSP IIINK+ E +L SD NPYFPV CEYGGP++AI AGD+ + F+L P +P HN YELVW +K G RL RIL GEE+F IL EGY+ R +Q+GH T RD I+ Sbjct: 20 APVPRCSPLIIINKVPESMSLTSDMNPYFPVAECEYGGPMQAILAGDFNSVFILDEPGKIPLHNLYELVWIVKKGWPRLQRILAGEEEFKFSPEILLEGYRGDQKTPRLQQLGHGTSRDKTKID 143
BLAST of EMLSAG00000000792 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold1073_size64583-snap-gene-0.7 (protein:Tk02398 transcript:maker-scaffold1073_size64583-snap-gene-0.7-mRNA-1 annotation:"unnamed protein product") HSP 1 Score: 201.06 bits (510), Expect = 7.164e-62 Identity = 88/149 (59.06%), Postives = 113/149 (75.84%), Query Frame = 0 Query: 12 VIVSVLIPSVPAPVPRCSPFIIINKLAEFSNLVSDSNPYFPVPPCEYGGPLEAIRAGDYEAXFVLARPELVPRHNFYELVWFLKFGAERLGRILRGEEKFIADQNILREGYQHYTPYVRTRQIGHDTFRDPIIINDKRLYNRIVGSRLR 160 ++V LI VPAPVPRCSP IIINKLAE +N++SDSNPYFPVPPCEYGG EA+ GD++A + A P+ +P HNFYE +W LK G R+ R+L GEE+F ++ IL EGY H+TP+VRT+Q G T R+PIII+DK Y IVG+R++ Sbjct: 115 ILVLELIQPVPAPVPRCSPLIIINKLAESTNILSDSNPYFPVPPCEYGGWTEALAEGDFQAVSIFAEPQKIPLHNFYEFIWLLKTGGPRMFRMLTGEEEFKMNRQILNEGYHHHTPHVRTQQFGQYTHRNPIIIDDKNTYKVIVGNRIK 263 The following BLAST results are available for this feature:
BLAST of EMLSAG00000000792 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO) Total hits: 0
BLAST of EMLSAG00000000792 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA) Total hits: 9
BLAST of EMLSAG00000000792 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self) Total hits: 2
BLAST of EMLSAG00000000792 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt) Total hits: 0
BLAST of EMLSAG00000000792 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods) Total hits: 0
BLAST of EMLSAG00000000792 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017)) Total hits: 1
BLAST of EMLSAG00000000792 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins) Total hits: 1
Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Cross References
External references for this gene
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at LSalAtl2s1130:7195..13371+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>EMLSAG00000000792-683558 ID=EMLSAG00000000792-683558|Name=EMLSAG00000000792|organism=Lepeophtheirus salmonis|type=gene|length=6177bp|location=Sequence derived from alignment at LSalAtl2s1130:7195..13371+ (Lepeophtheirus salmonis)back to top Add to Basket
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