EMLSAG00000000802, EMLSAG00000000802-683568 (gene) Lepeophtheirus salmonis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of EMLSAG00000000802 vs. C. finmarchicus
Match: gi|592871120|gb|GAXK01086442.1| (TSA: Calanus finmarchicus comp479109_c0_seq1 transcribed RNA sequence) HSP 1 Score: 45.4394 bits (106), Expect = 4.186e-6 Identity = 37/85 (43.53%), Postives = 42/85 (49.41%), Query Frame = 0 Query: 4 NGLVVDAAASHSPNVSGSRMFFVSGQSQMLRIPPVKLTKPYTPIGNAGCILSNEPTIGDKILPKRAATVAKLRAVVRSTVGKSSL 88 NGL + S S VSGS VSG+ + R P K+ P T IG G I + G I P A AK RA R TVGKSSL Sbjct: 286 NGLFLLRNISPSTKVSGSFFLLVSGRRMVCR-PTTKVIVPNTKIGRIGSISAR*AINGAVIEPILAMEQAKERATDRMTVGKSSL 537
BLAST of EMLSAG00000000802 vs. C. finmarchicus
Match: gi|592805408|gb|GAXK01149160.1| (TSA: Calanus finmarchicus comp96011_c0_seq1 transcribed RNA sequence) HSP 1 Score: 42.3578 bits (98), Expect = 8.804e-5 Identity = 35/84 (41.67%), Postives = 43/84 (51.19%), Query Frame = 0 Query: 6 LVVDAAASHSPNVSGSRM-FFVSGQSQMLRIPPVKLTKPYTPIGNAGCILSNEPTIGDKILPKRAATVAKLRAVVRSTVGKSSL 88 L+ AA S S VSGS + VSG S LR+PP T PYT + G +S + T G + P AA + RA TVG SL Sbjct: 1351 LLPPAATSPSSKVSGSMVHLLVSGCSIKLRMPPTMATTPYTRMDMPGL*VSVKTTKGAMMAPSLAALLQVARAEFLMTVGNISL 1602
BLAST of EMLSAG00000000802 vs. C. finmarchicus
Match: gi|592754121|gb|GAXK01200292.1| (TSA: Calanus finmarchicus comp307940_c0_seq1 transcribed RNA sequence) HSP 1 Score: 40.0466 bits (92), Expect = 5.383e-4 Identity = 35/84 (41.67%), Postives = 40/84 (47.62%), Query Frame = 0 Query: 5 GLVVDAAASHSPNVSGSRMFFVSGQSQMLRIPPVKLTKPYTPIGNAGCILSNEPTIGDKILPKRAATVAKLRAVVRSTVGKSSL 88 GL S S VSGS FVSG S M+ P K+ P T IG+ G + G + P A A RA R TVGKSSL Sbjct: 79 GLFFLRNISPSCKVSGSFFLFVSG-SNMV*SPTTKVIVPNTKIGSTGFTSAK*AMKGASMDPILAMEQANDRATDRITVGKSSL 327
BLAST of EMLSAG00000000802 vs. C. finmarchicus
Match: gi|592751853|gb|GAXK01202560.1| (TSA: Calanus finmarchicus comp6536121_c0_seq1 transcribed RNA sequence) HSP 1 Score: 30.8018 bits (68), Expect = 2.827e-1 Identity = 13/37 (35.14%), Postives = 21/37 (56.76%), Query Frame = 0 Query: 23 MFFVSGQSQMLRIPPVKLTKPYTPIGNAGCILSNEPT 59 FF+ ++LR+PPV+L P P+ C+ S+ P Sbjct: 136 FFFICEGVELLRLPPVRLNTP--PVIAVDCVSSSNPC 240
BLAST of EMLSAG00000000802 vs. C. finmarchicus
Match: gi|592774224|gb|GAXK01180344.1| (TSA: Calanus finmarchicus comp1633361_c0_seq1 transcribed RNA sequence) HSP 1 Score: 28.4906 bits (62), Expect = 3.244e+0 Identity = 25/70 (35.71%), Postives = 32/70 (45.71%), Query Frame = 0 Query: 18 VSGSRMFFVSGQSQMLRIPPVKLTKPYTPIGNAGCILSNEPTIGDKILPKRAATVAKLRAVVRSTVGKSS 87 VSG + VSG+ + + PP + T P T +G AG T G I P R AV + VG SS Sbjct: 1412 VSGRFVPCVSGRIRNIIRPPARDTTPITIMGRAGETRDRR*T*GASIPPTRPHIEDTPMAVFLTEVGNSS 1621
BLAST of EMLSAG00000000802 vs. C. finmarchicus
Match: gi|592769134|gb|GAXK01185434.1| (TSA: Calanus finmarchicus comp321731_c0_seq1 transcribed RNA sequence) HSP 1 Score: 28.1054 bits (61), Expect = 3.792e+0 Identity = 11/48 (22.92%), Postives = 26/48 (54.17%), Query Frame = 0 Query: 44 YTPIGNAGCILSNEPTIGDKILPKRAATVAKLRAVVRSTVGKSSLQKI 91 Y+P+ + GC+ N ++ + PKR ++ R+T +S+++ + Sbjct: 622 YSPLTHKGCMYDNCNSLRPAVAPKRLQFSENYASLRRATHNQSAMENV 765
BLAST of EMLSAG00000000802 vs. C. finmarchicus
Match: gi|592923672|gb|GAXK01034743.1| (TSA: Calanus finmarchicus comp111406_c0_seq2 transcribed RNA sequence) HSP 1 Score: 28.1054 bits (61), Expect = 4.310e+0 Identity = 27/71 (38.03%), Postives = 32/71 (45.07%), Query Frame = 0 Query: 18 VSGSRMFFVSGQSQMLRIPPVKLTKPYTPIGNAGCIL-SNEPTIGDKILPKRAATVAKLRAVVRSTVGKSS 87 VSGS +FFVSG R P P G AG + S+ P G +LP RA A +TVG S Sbjct: 1174 VSGSLVFFVSGSRSTTR-PANTDVTPKMITGAAGLLRPSSLPM*GAMMLPTRAHMEADPTPTFLTTVGNIS 1383
BLAST of EMLSAG00000000802 vs. C. finmarchicus
Match: gi|592923673|gb|GAXK01034742.1| (TSA: Calanus finmarchicus comp111406_c0_seq1 transcribed RNA sequence) HSP 1 Score: 28.1054 bits (61), Expect = 4.313e+0 Identity = 27/71 (38.03%), Postives = 32/71 (45.07%), Query Frame = 0 Query: 18 VSGSRMFFVSGQSQMLRIPPVKLTKPYTPIGNAGCIL-SNEPTIGDKILPKRAATVAKLRAVVRSTVGKSS 87 VSGS +FFVSG R P P G AG + S+ P G +LP RA A +TVG S Sbjct: 1174 VSGSLVFFVSGSRSTTR-PANTDVTPKMITGAAGLLRPSSLPM*GAMMLPTRAHMEADPTPTFLTTVGNIS 1383
BLAST of EMLSAG00000000802 vs. C. finmarchicus
Match: gi|592810119|gb|GAXK01144449.1| (TSA: Calanus finmarchicus comp366465_c0_seq1 transcribed RNA sequence) HSP 1 Score: 27.7202 bits (60), Expect = 4.570e+0 Identity = 23/70 (32.86%), Postives = 35/70 (50.00%), Query Frame = 0 Query: 18 VSGSRMFFVSGQSQMLRIPPVKLTKPYTPIGNAGCILSNEPTIGDKILPKRAATVAKLRAVVRSTVGKSS 87 VSGS +FFVSG+++ +++T +A + S+ P G P A + R R+TVGK S Sbjct: 167 VSGSAIFFVSGRNRTKMAAMIEVTPNMMSGASALFLASSLPM*GAITPPTLAHVEEEPRPTFRTTVGKIS 376
BLAST of EMLSAG00000000802 vs. C. finmarchicus
Match: gi|592810118|gb|GAXK01144450.1| (TSA: Calanus finmarchicus comp366465_c1_seq1 transcribed RNA sequence) HSP 1 Score: 27.7202 bits (60), Expect = 5.053e+0 Identity = 25/75 (33.33%), Postives = 37/75 (49.33%), Query Frame = 0 Query: 13 SHSPNVSGSRMFFVSGQSQMLRIPPVKLTKPYTPIGNAGCILSNEPTIGDKILPKRAATVAKLRAVVRSTVGKSS 87 S S VSGS +FFVSG+++ +++T +A + S+ P G P A + R R+TVGK S Sbjct: 64 SPSSMVSGSAIFFVSGRNRTKMAAMIEVTPNMMSGASALFLASSLPM*GAITPPTLAQVEEEPRPTFRTTVGKIS 288
BLAST of EMLSAG00000000802 vs. L. salmonis peptides
Match: EMLSAP00000000802 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1136:166515:166895:-1 gene:EMLSAG00000000802 transcript:EMLSAT00000000802 description:"maker-LSalAtl2s1136-snap-gene-1.92") HSP 1 Score: 184.496 bits (467), Expect = 1.510e-61 Identity = 91/91 (100.00%), Postives = 91/91 (100.00%), Query Frame = 0 Query: 1 MMKNGLVVDAAASHSPNVSGSRMFFVSGQSQMLRIPPVKLTKPYTPIGNAGCILSNEPTIGDKILPKRAATVAKLRAVVRSTVGKSSLQKI 91 MMKNGLVVDAAASHSPNVSGSRMFFVSGQSQMLRIPPVKLTKPYTPIGNAGCILSNEPTIGDKILPKRAATVAKLRAVVRSTVGKSSLQKI Sbjct: 1 MMKNGLVVDAAASHSPNVSGSRMFFVSGQSQMLRIPPVKLTKPYTPIGNAGCILSNEPTIGDKILPKRAATVAKLRAVVRSTVGKSSLQKI 91 The following BLAST results are available for this feature:
BLAST of EMLSAG00000000802 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO) Total hits: 0
BLAST of EMLSAG00000000802 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA) Total hits: 11
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BLAST of EMLSAG00000000802 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self) Total hits: 1
BLAST of EMLSAG00000000802 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt) Total hits: 0
BLAST of EMLSAG00000000802 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods) Total hits: 0
BLAST of EMLSAG00000000802 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017)) Total hits: 0
BLAST of EMLSAG00000000802 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins) Total hits: 0
Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Cross References
External references for this gene
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at LSalAtl2s1136:166515..166895- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>EMLSAG00000000802-683568 ID=EMLSAG00000000802-683568|Name=EMLSAG00000000802|organism=Lepeophtheirus salmonis|type=gene|length=381bp|location=Sequence derived from alignment at LSalAtl2s1136:166515..166895- (Lepeophtheirus salmonis)back to top Add to Basket
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