EMLSAG00000000848, EMLSAG00000000848-683614 (gene) Lepeophtheirus salmonis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of EMLSAG00000000848 vs. C. finmarchicus
Match: gi|592816436|gb|GAXK01138132.1| (TSA: Calanus finmarchicus comp103790_c6_seq27 transcribed RNA sequence) HSP 1 Score: 34.2686 bits (77), Expect = 1.199e-1 Identity = 18/58 (31.03%), Postives = 29/58 (50.00%), Query Frame = 0 Query: 19 VDCLYRFFACSDDHTYGKWPMNARVCLRDY-QVCTAERKWNQKETDYGRVKITRPIIN 75 DC + +F+C+ ++YG+WP N C + + Q C W Q T RP+I+ Sbjct: 175 ADCTWDYFSCT--NSYGRWPGNKDCCDQRFNQCCMLVMTWQQPTT-------HRPVIS 321
BLAST of EMLSAG00000000848 vs. C. finmarchicus
Match: gi|592816402|gb|GAXK01138166.1| (TSA: Calanus finmarchicus comp103790_c19_seq31 transcribed RNA sequence) HSP 1 Score: 34.2686 bits (77), Expect = 1.303e-1 Identity = 18/58 (31.03%), Postives = 29/58 (50.00%), Query Frame = 0 Query: 19 VDCLYRFFACSDDHTYGKWPMNARVCLRDY-QVCTAERKWNQKETDYGRVKITRPIIN 75 DC + +F+C+ ++YG+WP N C + + Q C W Q T RP+I+ Sbjct: 11 ADCTWDYFSCT--NSYGRWPGNKDCCDQRFNQCCMLVMTWQQPTT-------HRPVIS 157
BLAST of EMLSAG00000000848 vs. C. finmarchicus
Match: gi|592816441|gb|GAXK01138127.1| (TSA: Calanus finmarchicus comp103790_c6_seq22 transcribed RNA sequence) HSP 1 Score: 34.6538 bits (78), Expect = 1.321e-1 Identity = 18/58 (31.03%), Postives = 29/58 (50.00%), Query Frame = 0 Query: 19 VDCLYRFFACSDDHTYGKWPMNARVCLRDY-QVCTAERKWNQKETDYGRVKITRPIIN 75 DC + +F+C+ ++YG+WP N C + + Q C W Q T RP+I+ Sbjct: 175 ADCTWDYFSCT--NSYGRWPGNKDCCDQRFNQCCMLVMTWQQPTT-------HRPVIS 321
BLAST of EMLSAG00000000848 vs. C. finmarchicus
Match: gi|592816408|gb|GAXK01138160.1| (TSA: Calanus finmarchicus comp103790_c19_seq25 transcribed RNA sequence) HSP 1 Score: 34.2686 bits (77), Expect = 1.588e-1 Identity = 18/58 (31.03%), Postives = 29/58 (50.00%), Query Frame = 0 Query: 19 VDCLYRFFACSDDHTYGKWPMNARVCLRDY-QVCTAERKWNQKETDYGRVKITRPIIN 75 DC + +F+C+ ++YG+WP N C + + Q C W Q T RP+I+ Sbjct: 11 ADCTWDYFSCT--NSYGRWPGNKDCCDQRFNQCCMLVMTWQQPTT-------HRPVIS 157
BLAST of EMLSAG00000000848 vs. C. finmarchicus
Match: gi|592816442|gb|GAXK01138126.1| (TSA: Calanus finmarchicus comp103790_c6_seq21 transcribed RNA sequence) HSP 1 Score: 34.2686 bits (77), Expect = 1.605e-1 Identity = 18/58 (31.03%), Postives = 29/58 (50.00%), Query Frame = 0 Query: 19 VDCLYRFFACSDDHTYGKWPMNARVCLRDY-QVCTAERKWNQKETDYGRVKITRPIIN 75 DC + +F+C+ ++YG+WP N C + + Q C W Q T RP+I+ Sbjct: 235 ADCTWDYFSCT--NSYGRWPGNKDCCDQRFNQCCMLVMTWQQPTT-------HRPVIS 381
BLAST of EMLSAG00000000848 vs. C. finmarchicus
Match: gi|592898302|gb|GAXK01060073.1| (TSA: Calanus finmarchicus comp1860483_c0_seq1 transcribed RNA sequence) HSP 1 Score: 35.039 bits (79), Expect = 1.643e-1 Identity = 15/32 (46.88%), Postives = 19/32 (59.38%), Query Frame = 0 Query: 20 DCLYRFFACSDDHTYGKWPMNARVCLRDYQVC 51 DCL+ FF+CSD G WP N + C R + C Sbjct: 401 DCLFLFFSCSDYEAPG-WPENKKRCSRLFDFC 493
BLAST of EMLSAG00000000848 vs. C. finmarchicus
Match: gi|592816445|gb|GAXK01138123.1| (TSA: Calanus finmarchicus comp103790_c6_seq18 transcribed RNA sequence) HSP 1 Score: 34.6538 bits (78), Expect = 1.749e-1 Identity = 18/58 (31.03%), Postives = 29/58 (50.00%), Query Frame = 0 Query: 19 VDCLYRFFACSDDHTYGKWPMNARVCLRDY-QVCTAERKWNQKETDYGRVKITRPIIN 75 DC + +F+C+ ++YG+WP N C + + Q C W Q T RP+I+ Sbjct: 235 ADCTWDYFSCT--NSYGRWPGNKDCCDQRFNQCCMLVMTWQQPTTH-------RPVIS 381
BLAST of EMLSAG00000000848 vs. C. finmarchicus
Match: gi|592816404|gb|GAXK01138164.1| (TSA: Calanus finmarchicus comp103790_c19_seq29 transcribed RNA sequence) HSP 1 Score: 33.8834 bits (76), Expect = 1.802e-1 Identity = 18/58 (31.03%), Postives = 29/58 (50.00%), Query Frame = 0 Query: 19 VDCLYRFFACSDDHTYGKWPMNARVCLRDY-QVCTAERKWNQKETDYGRVKITRPIIN 75 DC + +F+C+ ++YG+WP N C + + Q C W Q T RP+I+ Sbjct: 30 ADCTWDYFSCT--NSYGRWPDNKDCCDQRFNQCCMLVMTWQQPTT-------HRPVIS 176
BLAST of EMLSAG00000000848 vs. C. finmarchicus
Match: gi|592816409|gb|GAXK01138159.1| (TSA: Calanus finmarchicus comp103790_c19_seq24 transcribed RNA sequence) HSP 1 Score: 33.8834 bits (76), Expect = 2.357e-1 Identity = 18/58 (31.03%), Postives = 29/58 (50.00%), Query Frame = 0 Query: 19 VDCLYRFFACSDDHTYGKWPMNARVCLRDY-QVCTAERKWNQKETDYGRVKITRPIIN 75 DC + +F+C+ ++YG+WP N C + + Q C W Q T RP+I+ Sbjct: 30 ADCTWDYFSCT--NSYGRWPDNKDCCDQRFNQCCMLVMTWQQPTT-------HRPVIS 176
BLAST of EMLSAG00000000848 vs. C. finmarchicus
Match: gi|592816456|gb|GAXK01138112.1| (TSA: Calanus finmarchicus comp103790_c6_seq7 transcribed RNA sequence) HSP 1 Score: 33.8834 bits (76), Expect = 5.415e-1 Identity = 18/58 (31.03%), Postives = 29/58 (50.00%), Query Frame = 0 Query: 19 VDCLYRFFACSDDHTYGKWPMNARVCLRDY-QVCTAERKWNQKETDYGRVKITRPIIN 75 DC + +F+C+ ++YG+WP N C + + Q C W Q T RP+I+ Sbjct: 235 ADCTWDYFSCT--NSYGRWPGNKDCCDQRFNQCCMLVMTWQQPTTH-------RPVIS 381
BLAST of EMLSAG00000000848 vs. L. salmonis peptides
Match: EMLSAP00000000848 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1142:30276:37232:-1 gene:EMLSAG00000000848 transcript:EMLSAT00000000848 description:"maker-LSalAtl2s1142-snap-gene-0.20") HSP 1 Score: 562.377 bits (1448), Expect = 0.000e+0 Identity = 272/272 (100.00%), Postives = 272/272 (100.00%), Query Frame = 0 Query: 1 MFNYKIIILSIIGFVLCQVDCLYRFFACSDDHTYGKWPMNARVCLRDYQVCTAERKWNQKETDYGRVKITRPIINPNHQTENGSYLTPRIVDYLYSFSCFDTICGNQRKKLSCGSNGKIKLYFVFYGRAEKDECSANLSHLDFLENQIIPSTSEPYNSSFSGSMVVDDKKKIPYDRSDKNIYSIIDKSCSKELLDVSCESYGGNIEIIEHIVGRTRGICDSANQDLECFERIPGILPSCEGQRKCMIDLTGTETCPIETKYRRILYRCTNFG 272 MFNYKIIILSIIGFVLCQVDCLYRFFACSDDHTYGKWPMNARVCLRDYQVCTAERKWNQKETDYGRVKITRPIINPNHQTENGSYLTPRIVDYLYSFSCFDTICGNQRKKLSCGSNGKIKLYFVFYGRAEKDECSANLSHLDFLENQIIPSTSEPYNSSFSGSMVVDDKKKIPYDRSDKNIYSIIDKSCSKELLDVSCESYGGNIEIIEHIVGRTRGICDSANQDLECFERIPGILPSCEGQRKCMIDLTGTETCPIETKYRRILYRCTNFG Sbjct: 1 MFNYKIIILSIIGFVLCQVDCLYRFFACSDDHTYGKWPMNARVCLRDYQVCTAERKWNQKETDYGRVKITRPIINPNHQTENGSYLTPRIVDYLYSFSCFDTICGNQRKKLSCGSNGKIKLYFVFYGRAEKDECSANLSHLDFLENQIIPSTSEPYNSSFSGSMVVDDKKKIPYDRSDKNIYSIIDKSCSKELLDVSCESYGGNIEIIEHIVGRTRGICDSANQDLECFERIPGILPSCEGQRKCMIDLTGTETCPIETKYRRILYRCTNFG 272
BLAST of EMLSAG00000000848 vs. L. salmonis peptides
Match: EMLSAP00000000847 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1142:20434:22839:-1 gene:EMLSAG00000000847 transcript:EMLSAT00000000847 description:"maker-LSalAtl2s1142-snap-gene-0.19") HSP 1 Score: 129.413 bits (324), Expect = 5.904e-34 Identity = 65/155 (41.94%), Postives = 89/155 (57.42%), Query Frame = 0 Query: 5 KIIILSIIGFVLCQV---------------------DCLYRFFACSDDHTYGKWPMNARVCLRDYQVCTAERKWNQKETDYGRVKITRPIINPNHQTENGSYLTPRIVDYLYSFSCFDTICGNQRKKLSCGSNGKIKLYFVFYGRAEKDECSANL 138 K+I+LSI+G + + DCLYR+F+CSDDHTYGKWPMN+R+C RDYQ C AE KWN + V IT P+ NP + TE + I YL++F+ + IC +++ LSCG G I + FVF+GR E ++C L Sbjct: 4 KVILLSILGGICTPIGGDKRNKFPLGSHANPPFEFADCLYRYFSCSDDHTYGKWPMNSRICYRDYQFCLAEAKWNXGVXSHXGVTITYPLENPTYNTEIST-----IGHYLFNFAFHERICSYKKENLSCGPFGNIHIIFVFFGRVEGNDCPTIL 153 HSP 2 Score: 75.485 bits (184), Expect = 1.184e-15 Identity = 33/76 (43.42%), Postives = 53/76 (69.74%), Query Frame = 0 Query: 171 KIPYDRSDKNIYSIIDKSCSKELLDVSCESYGGNIEIIEHIVGRTRGICDSANQDLECFERIPGILPSCEGQRKCM 246 ++P ++KNIY IIDK+C+K+ + +SC +YGGN+ +IE I GRT+G+C+S +EC + +LPSC + C+ Sbjct: 357 EMPNQNTEKNIYVIIDKACAKDQISLSCYNYGGNVIVIEFITGRTKGMCNSEMPIIECSKTFNEMLPSCMDYQACL 432
BLAST of EMLSAG00000000848 vs. L. salmonis peptides
Match: EMLSAP00000000849 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1142:40745:42648:-1 gene:EMLSAG00000000849 transcript:EMLSAT00000000849 description:"maker-LSalAtl2s1142-snap-gene-0.21") HSP 1 Score: 105.531 bits (262), Expect = 4.692e-26 Identity = 58/110 (52.73%), Postives = 69/110 (62.73%), Query Frame = 0 Query: 171 KIPYDRSDKNIYSIIDKSCSKELLDVSCESYGGNIEIIEHIVGRTRGICDSANQDLECFERIPGILPSCEGQRKC-----------MIDLTGTETCPIETKYRRILYRCT 269 +IPY+RS KNIY I DKSC++ELL +SC YGGNIEIIE I+GRT G CDS N DLEC R+ GILPSC G+ C +DL+ TC + I Y CT Sbjct: 101 QIPYERSKKNIYVIYDKSCARELLAISCNVYGGNIEIIESIIGRTSGECDSLNPDLECSIRVTGILPSCLGKPVCDPVEDRLFKQTNLDLSQQATCK-GINFYEIRYTCT 209 HSP 2 Score: 51.2174 bits (121), Expect = 1.308e-7 Identity = 23/35 (65.71%), Postives = 26/35 (74.29%), Query Frame = 0 Query: 238 SCEGQRKCMIDLTGTETCPIETKYRRILYRCTNFG 272 +C Q C IDLT TETCP T YRRIL+RC+NFG Sbjct: 429 NCLNQEICNIDLTRTETCPEPTHYRRILFRCSNFG 463
BLAST of EMLSAG00000000848 vs. L. salmonis peptides
Match: EMLSAP00000003788 (pep:novel supercontig:LSalAtl2s:LSalAtl2s2052:11675:16438:1 gene:EMLSAG00000003788 transcript:EMLSAT00000003788 description:"snap_masked-LSalAtl2s2052-processed-gene-0.2") HSP 1 Score: 58.151 bits (139), Expect = 5.368e-10 Identity = 36/127 (28.35%), Postives = 56/127 (44.09%), Query Frame = 0 Query: 13 GFVLCQVDCLYRFFACSDDHTYGKWPMNARVCLRDYQVCTAERKWNQKETDYGRVKIT---RPIINPNHQTENGSYLTPRIVDYLYSFSCFDTICGN--QRKKLSCGSNGKIKLYFVFYGRAEKDEC 134 F+L DC Y F +C TYG + +N +C Y C + N YG + + PI + ++ N Y +L +++ D C + Q LSC +NG+I + FYGR + C Sbjct: 5 SFILEHDDCTYLFISCMAHDTYGNYYVNRELCQTHYHDCLHSLELNTVTNKYGSITVITPKEPISHISYDKYNKYYYVTHDRRHLSTYTIKDVACSSPPQDLNLSCKNNGRIIIKRTFYGRRDSSTC 131 The following BLAST results are available for this feature:
BLAST of EMLSAG00000000848 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO) Total hits: 0
BLAST of EMLSAG00000000848 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA) Total hits: 25
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BLAST of EMLSAG00000000848 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self) Total hits: 4
BLAST of EMLSAG00000000848 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt) Total hits: 0
BLAST of EMLSAG00000000848 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods) Total hits: 0
BLAST of EMLSAG00000000848 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017)) Total hits: 0
BLAST of EMLSAG00000000848 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins) Total hits: 0
Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Cross References
External references for this gene
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at LSalAtl2s1142:30276..37232- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>EMLSAG00000000848-683614 ID=EMLSAG00000000848-683614|Name=EMLSAG00000000848|organism=Lepeophtheirus salmonis|type=gene|length=6957bp|location=Sequence derived from alignment at LSalAtl2s1142:30276..37232- (Lepeophtheirus salmonis)back to top Add to Basket
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