EMLSAG00000000853, EMLSAG00000000853-683619 (gene) Lepeophtheirus salmonis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of EMLSAG00000000853 vs. C. finmarchicus
Match: gi|592863984|gb|GAXK01093578.1| (TSA: Calanus finmarchicus comp373224_c0_seq4 transcribed RNA sequence) HSP 1 Score: 28.4906 bits (62), Expect = 6.564e+0 Identity = 14/22 (63.64%), Postives = 16/22 (72.73%), Query Frame = 0 Query: 114 GHPGEPGKRGRDGIVGLPGSAG 135 G+PG PGK G+DGI G PG G Sbjct: 169 GNPGTPGKNGKDGIPGNPGPQG 234
BLAST of EMLSAG00000000853 vs. C. finmarchicus
Match: gi|592863981|gb|GAXK01093581.1| (TSA: Calanus finmarchicus comp373224_c0_seq7 transcribed RNA sequence) HSP 1 Score: 28.1054 bits (61), Expect = 7.079e+0 Identity = 14/22 (63.64%), Postives = 16/22 (72.73%), Query Frame = 0 Query: 114 GHPGEPGKRGRDGIVGLPGSAG 135 G+PG PGK G+DGI G PG G Sbjct: 53 GNPGTPGKNGKDGIPGNPGPQG 118
BLAST of EMLSAG00000000853 vs. C. finmarchicus
Match: gi|592930725|gb|GAXK01027828.1| (TSA: Calanus finmarchicus comp246816_c0_seq11 transcribed RNA sequence) HSP 1 Score: 28.4906 bits (62), Expect = 9.687e+0 Identity = 13/27 (48.15%), Postives = 15/27 (55.56%), Query Frame = 0 Query: 110 VGPKGHPGEPGKRGRDGIVGLPGSAGR 136 G G G G+ GRDGIVG G+ G Sbjct: 125 AGAHGERGADGRDGRDGIVGKAGNIGH 205
BLAST of EMLSAG00000000853 vs. L. salmonis peptides
Match: EMLSAP00000000853 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1142:96548:98438:1 gene:EMLSAG00000000853 transcript:EMLSAT00000000853 description:"maker-LSalAtl2s1142-snap-gene-1.39") HSP 1 Score: 279.641 bits (714), Expect = 1.671e-97 Identity = 137/137 (100.00%), Postives = 137/137 (100.00%), Query Frame = 0 Query: 1 MSSNNMNSNQSNRSWSEENNSGFTNMSSFMGYRQRVEIFLEKSLPYLVAGLSVTMLFVVPLTFSAFHNINTKSAKSALTGESVGRLNDQLSKKIDAINKKLDFLEHNSKVGPKGHPGEPGKRGRDGIVGLPGSAGRK 137 MSSNNMNSNQSNRSWSEENNSGFTNMSSFMGYRQRVEIFLEKSLPYLVAGLSVTMLFVVPLTFSAFHNINTKSAKSALTGESVGRLNDQLSKKIDAINKKLDFLEHNSKVGPKGHPGEPGKRGRDGIVGLPGSAGRK Sbjct: 1 MSSNNMNSNQSNRSWSEENNSGFTNMSSFMGYRQRVEIFLEKSLPYLVAGLSVTMLFVVPLTFSAFHNINTKSAKSALTGESVGRLNDQLSKKIDAINKKLDFLEHNSKVGPKGHPGEPGKRGRDGIVGLPGSAGRK 137 The following BLAST results are available for this feature:
BLAST of EMLSAG00000000853 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO) Total hits: 0
BLAST of EMLSAG00000000853 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA) Total hits: 13
Pagesback to top
BLAST of EMLSAG00000000853 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self) Total hits: 1
BLAST of EMLSAG00000000853 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt) Total hits: 0
BLAST of EMLSAG00000000853 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods) Total hits: 0
BLAST of EMLSAG00000000853 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017)) Total hits: 0
BLAST of EMLSAG00000000853 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins) Total hits: 0
Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Cross References
External references for this gene
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at LSalAtl2s1142:96548..98438+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>EMLSAG00000000853-683619 ID=EMLSAG00000000853-683619|Name=EMLSAG00000000853|organism=Lepeophtheirus salmonis|type=gene|length=1891bp|location=Sequence derived from alignment at LSalAtl2s1142:96548..98438+ (Lepeophtheirus salmonis)back to top Add to Basket
|