EMLSAG00000000898, EMLSAG00000000898-683664 (gene) Lepeophtheirus salmonis

Overview
NameEMLSAG00000000898
Unique NameEMLSAG00000000898-683664
Typegene
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Homology
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BLAST of EMLSAG00000000898 vs. L. salmonis peptides
Match: EMLSAP00000000898 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1157:164971:168326:-1 gene:EMLSAG00000000898 transcript:EMLSAT00000000898 description:"snap_masked-LSalAtl2s1157-processed-gene-1.11")

HSP 1 Score: 148.288 bits (373), Expect = 7.307e-48
Identity = 73/73 (100.00%), Postives = 73/73 (100.00%), Query Frame = 0 
Query:    1 MSRSYRTKGLSLEEIQSLLDEEYSDSETECAQVLTIEPPIEEAAADTDCDSDSSDNQKTRLPEGTFLNTNCIG 73
            MSRSYRTKGLSLEEIQSLLDEEYSDSETECAQVLTIEPPIEEAAADTDCDSDSSDNQKTRLPEGTFLNTNCIG
Sbjct:    1 MSRSYRTKGLSLEEIQSLLDEEYSDSETECAQVLTIEPPIEEAAADTDCDSDSSDNQKTRLPEGTFLNTNCIG 73
The following BLAST results are available for this feature:
BLAST of EMLSAG00000000898 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000000898 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000000898 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self)
Total hits: 1
Match NameE-valueIdentityDescription
EMLSAP000000008987.307e-48100.00pep:novel supercontig:LSalAtl2s:LSalAtl2s1157:1649... [more]
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BLAST of EMLSAG00000000898 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000000898 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000000898 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017))
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000000898 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1157supercontigLSalAtl2s1157:164971..168326 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Blast vs. GO2014-04-02
TblastN vs C. finmarchicus TSA2014-05-09
Blastp vs. self2014-05-10
Blastp vs. SwissProt2017-02-10
Blastp vs. Selected Arthropods2017-02-20
Blastp vs. NR (2/2017)2017-02-20
Blastp vs. Tigriopus kingsejongensis proteins2018-04-18
Properties
Property NameValue
Logic nameensemblgenomes
Descriptionsnap_masked-LSalAtl2s1157-processed-gene-1.11
Biotypeprotein_coding
EvidenceIEA
NoteHypothetical protein
Cross References
External references for this gene
DatabaseAccession
Ensembl Metazoa (gene)EMLSAG00000000898 (primary cross-reference)
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
EMLSAT00000000898EMLSAT00000000898-696745Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at LSalAtl2s1157:164971..168326-

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAG00000000898-683664 ID=EMLSAG00000000898-683664|Name=EMLSAG00000000898|organism=Lepeophtheirus salmonis|type=gene|length=3356bp|location=Sequence derived from alignment at LSalAtl2s1157:164971..168326- (Lepeophtheirus salmonis)
ATGTCGCGATCCTACAGAACTAAAGGGTATGTTTTAACTAAACAACCCGT
AATATATATATAATCTTTTCACATACTTTCATGCATGAAGAACTGTTCCA
TATTTTTGGACAACTTTATTTCATATTTTTCATTATTTATCAGCATAAAT
ATAAGGGATGGGAACAAATTTTCCCATTCGGCGTTGGTATAACGCTGCAT
GCTATTACATATGTTTTGTCTTGCATCATAGTTACTATTCTTGTGAACTC
GTTATAGATGTTGTACAAATGTATTGTTTTGAGCAATATATATCACAAAT
AATAGATGTCAATAGTAGTCAGTGCCTCTTAATTTAGTAAATTTTTTTCT
AGATTGTCTTTGGAAGAAATACAATCTTTGCTTGATGAAGAATATTCTGA
CAGTGAAACTGAGTGTGCTCAAGTTTTAACAATTGAACCGCCCATTGAAG
AAGCAGCAGCGGACACAGACTGTGACTCTGATTCATCCGACAATCAGGTG
ACTGTAATCACACACATGAATCAGGTCATGAAGAATAGTAAATTTCAAGG
AAAATTTATGAGCGTAGATGAAATAATGGTGCCATATTATGGAAGGCATG
GGGATAAACAATATATTAGAGGGAAACCTCTTAGATTTGGCTTCAAGCTT
TGGGCTGCATGTTTAGCCTTATTGTAAATCATGTACAAACATACCTGATC
ATGGATTTGGCCACGGTCCAAATGTTGTATTAGAAATGGTAAATAAGACT
GGASTAAAAGAAGGACAGCATGTAATCTGCGACAATTATTTTGGAATTGT
TCTTATGCTGAAAGAACTATCACGAATGAAAATTGCTTGCACTACAACTC
TTCGTGAAGACCGGTTGGGTGGAGCTCCAGTCTTGTCAAGGCCACATATG
AACAAAAAAGCTCGTGGATCCATGGAAGAGGCATATACAGATTGTGGCTC
KTTAGTTAAATGGAAAAATAACAAAGTTGTAAGTGTAGCTTCYAARAAGA
TGAGASCKCAGCCATTGCAGAAAGTGAAACGGTGGGACAGGAAGCAGAAG
AAATATATTTAAATAGATATTCCAAATTCTATTTGTATCTACAATAAATA
CATGGGAGCTGTTGACCTTTTCGATCAACAAGTAGCAGCCTACAGAATAA
GGATAAGATCAAAAAAATGGCGGMGGCCTTTGTTTGCATGGAGTGTCNAT
GCTTGGCGTTTCAGCAGACAAAATAACCCTAATCTCAGCCTTCTGATTTT
TTCTCTAAATTTAGTTATTGCAGTGCTGAAAACATACGGGGTTGCAAAGA
AGCGTCCAGGACCAAAATATCCATTGGGAAGTGCAGCAGAAAGTGTTCGA
CTCAGTAATGAAGGCCACTGGACTGCAAGAGGAGAGCATGCTAGAAGTAG
ATGCAAAGAATGTAAAGGCCGCACACCTCATATATGTAAAAAGTGCAAAG
TTCCTTTGCACCCAGAATGCATGGAACCTTATCACACAAAGGAGTAAATG
CTCCAGTATCATCTTATGTTCATTTATAATATAATAAAAAGGATATTTTT
CTAGTTGAAATTCAATATTTGTTATCCTATTACCGAGTGGGAACATATGT
GCCCGGGCTGTATTTCTTCAGTTATAAGTAAATTTTGAAATTTTATTGTT
TTAAATGTGCCTTATTACTACTATGAGACAAACAAAATGACGATGGNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATATCTTATTATTGTA
TCTTATATTGATTGCACTATATAGGTTTTATGGATGATAACCTCGACAAA
AATGTGCAGAAAGCTTGATAATCGGTTAACATTTAAGTTGTGCGTACCAA
TTTCATCAGACAGAGGGTTTATAAGCTATGAATGGATAACGTTTTCGTTA
TTCATTTATTGATTTTATCTCTGTTTTCATCCATACCATTGAGACTGAGT
TGAAGTGCTCAGCGTTGTAATCAATCGTTTTCTATCATTAGAATTTAGAC
ACAAAATTTTTACCTCAAAGATATGAGTGTTGGCACTTCCGAATTAATTA
GGACAGAGCGTTGTTATTCTGTTCAGACCAGCGGTGAGACAAATGATATA
CAAAATCATTGTAAAATGTAGATCAAGTTTTTGACTGCTTTTAAACAATA
AGCTGCATAATCCATAATGAAAACTTTTAGTATCTCACCACAGGAATCGG
AGCTCAAAACTTTTTAAGTCAATACTTGTCATTGCTCTATGCCTTCTTAA
CATCTTTCAAATTTATTATGTTATGCGTTCTTCACTATAAACTGAACTTA
AAAATATATCAAGAGTTTCGATAAACCTGTTAATTGGGATGAATTATTAA
GAGATTTTGATTCTGTGTCTATACCTTTCATCAAACTGAGTTTTTAAATA
AATAAATATGTATCGATAAAGAATATTTATTTATGTTAGTTACCTGATTT
TTTTATATAGTTTTCTATATAAAATTTAAATCATCCATATTTAAGCTCTT
CTCTATTTAAATAGAGTTTAAGAAGTCTTATTGGTGATACTGATTAAGTA
AAAGGAGTGCTTGACTTATTCAACAGTTTCAAGCCCTGGGGTAGGAAGAA
GGCTTAAAAAGTGCCCTCATTCCCCAGGGAAAATTCCTCCTCTTGTTCTC
ACTCTGGATTAGAGGAATAATATTTTTTACAAGTTATTCCTTCGGTTAGG
ACAGCTTCCTTCACTTTTTCAAAGCTTTTATTAGTTTAAACTTGAAATAG
GTCAGACAAGTAAATCAATTTGAATTTCCTCTTCGCTTCCCTAAATGACA
ATGTATGCTAATAACATCAATAGCAKACTGGATAAAATATCCAGTGCATG
TGATGGTCTTGGGTGCTCTACACTCCCATGGCAATAAAAATGTGATTGAT
GCCTATTCTAAGGTACAATATACTTGTTCCATAGATCTTTAAGGAAACTA
TGACAGCAGAATGGTGTTCAATTGCACATAACAGCTAAGACTCTAAGATC
ATGTAAGGAAAACAACTTCTGACAACCTTATCACCAGACCTGACCCATTA
GGGCTTTTAAAAGTTGGATATCGTTGAAAGTATGATTAATTCAAATATGA
AACCCCTCAATACTAGTATTACAAAGGAATTGATAAAATTTCCTGAAGAT
AACCGAAACATGCCTCAATTACGTTATGATCAAATATATAATACCTTTTT
GGTTTAAAAAATCTAAATTTCAATTTATAATAAGTAAAAAGTTATCATTC
TTTAGAAGACAAGGTTACCAGAAGGGACATTTCTGAATACAAACTGTATA
GGGTAG
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