EMLSAG00000000918, EMLSAG00000000918-683684 (gene) Lepeophtheirus salmonis

Overview
NameEMLSAG00000000918
Unique NameEMLSAG00000000918-683684
Typegene
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Homology
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BLAST of EMLSAG00000000918 vs. L. salmonis peptides
Match: EMLSAP00000000918 (pep:novel supercontig:LSalAtl2s:LSalAtl2s115:532910:535167:-1 gene:EMLSAG00000000918 transcript:EMLSAT00000000918 description:"maker-LSalAtl2s115-snap-gene-5.8")

HSP 1 Score: 198.749 bits (504), Expect = 5.173e-67
Identity = 97/97 (100.00%), Postives = 97/97 (100.00%), Query Frame = 0 
Query:    1 MLALNTLEVMCQIVPANIQNSPSPPQSSRTYEYMSELSKGDQIETYDIDSNLAHLEVLKYINNSSTKMSSLDLFSTIKEMFLKYNTMIQSSAPVERR 97
            MLALNTLEVMCQIVPANIQNSPSPPQSSRTYEYMSELSKGDQIETYDIDSNLAHLEVLKYINNSSTKMSSLDLFSTIKEMFLKYNTMIQSSAPVERR
Sbjct:    1 MLALNTLEVMCQIVPANIQNSPSPPQSSRTYEYMSELSKGDQIETYDIDSNLAHLEVLKYINNSSTKMSSLDLFSTIKEMFLKYNTMIQSSAPVERR 97
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BLAST of EMLSAG00000000918 vs. Select Arthropod Genomes
Match: gb|EFA12573.1| (hypothetical protein TcasGA2_TC004202 [Tribolium castaneum])

HSP 1 Score: 50.447 bits (119), Expect = 7.827e-8
Identity = 23/42 (54.76%), Postives = 32/42 (76.19%), Query Frame = 0 
Query:   55 LEVLKYINNSSTKMSSLDLFSTIKEMFLKYNTMIQSSAPVER 96
            LE+L+Y  ++S  + SL+ F  I+E+FLKYNT + SSAPVER
Sbjct:  599 LEILQYAEDTSIDLKSLNRFPVIQELFLKYNTCLPSSAPVER 640
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BLAST of EMLSAG00000000918 vs. Select Arthropod Genomes
Match: gb|EFA13333.1| (Zinc finger BED domain-containing protein 4-like Protein [Tribolium castaneum])

HSP 1 Score: 50.447 bits (119), Expect = 7.990e-8
Identity = 23/42 (54.76%), Postives = 32/42 (76.19%), Query Frame = 0 
Query:   55 LEVLKYINNSSTKMSSLDLFSTIKEMFLKYNTMIQSSAPVER 96
            LE+L+Y  ++S  + SL+ F  I+E+FLKYNT + SSAPVER
Sbjct:  366 LEILQYAEDTSIDLKSLNRFPVIQELFLKYNTCLPSSAPVER 407
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BLAST of EMLSAG00000000918 vs. nr
Match: gi|751235578|ref|XP_011171577.1| (PREDICTED: uncharacterized protein LOC105204223 [Solenopsis invicta])

HSP 1 Score: 56.9954 bits (136), Expect = 1.128e-7
Identity = 29/60 (48.33%), Postives = 37/60 (61.67%), Query Frame = 0 
Query:   37 LSKGDQIETYDIDSNLAHLEVLKYINNSSTKMSSLDLFSTIKEMFLKYNTMIQSSAPVER 96
            L   D +ET D   N   +EVL Y+++    + SL  F  IK +FLKYNT+I SSAPVER
Sbjct:  159 LKDQDHVETTDTTDNTIGMEVLSYLSDKQKDIESLARFPHIKHLFLKYNTIIPSSAPVER 218
The following BLAST results are available for this feature:
BLAST of EMLSAG00000000918 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000000918 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000000918 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self)
Total hits: 1
Match NameE-valueIdentityDescription
EMLSAP000000009185.173e-67100.00pep:novel supercontig:LSalAtl2s:LSalAtl2s115:53291... [more]
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BLAST of EMLSAG00000000918 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000000918 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods)
Total hits: 2
Match NameE-valueIdentityDescription
gb|EFA12573.1|7.827e-854.76hypothetical protein TcasGA2_TC004202 [Tribolium c... [more]
gb|EFA13333.1|7.990e-854.76Zinc finger BED domain-containing protein 4-like P... [more]
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BLAST of EMLSAG00000000918 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017))
Total hits: 1
Match NameE-valueIdentityDescription
gi|751235578|ref|XP_011171577.1|1.128e-748.33PREDICTED: uncharacterized protein LOC105204223 [S... [more]
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BLAST of EMLSAG00000000918 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s115supercontigLSalAtl2s115:532910..535167 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Blast vs. GO2014-04-02
TblastN vs C. finmarchicus TSA2014-05-09
Blastp vs. self2014-05-10
Blastp vs. SwissProt2017-02-10
Blastp vs. Selected Arthropods2017-02-20
Blastp vs. NR (2/2017)2017-02-20
Blastp vs. Tigriopus kingsejongensis proteins2018-04-18
Properties
Property NameValue
Logic nameensemblgenomes
Descriptionmaker-LSalAtl2s115-snap-gene-5.8
Biotypeprotein_coding
EvidenceIEA
NoteHypothetical protein
Cross References
External references for this gene
DatabaseAccession
Ensembl Metazoa (gene)EMLSAG00000000918 (primary cross-reference)
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
EMLSAT00000000918EMLSAT00000000918-696765Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at LSalAtl2s115:532910..535167-

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAG00000000918-683684 ID=EMLSAG00000000918-683684|Name=EMLSAG00000000918|organism=Lepeophtheirus salmonis|type=gene|length=2258bp|location=Sequence derived from alignment at LSalAtl2s115:532910..535167- (Lepeophtheirus salmonis)
ATGCTTGCCCTGAACACATTAGAAGTCATGTGCCAAATCGTACCTGCAAA
TATACAGAATAGTCCATCACCCCCACAGTCTTCAAGAACATATGAATACA
TGTCTGAATTATCCAAGGGTGATCAAATTGAAACTTATGATATTGACTCT
AATTTAGCTCATCTTGAAGTCCTGAAATATATTAACAACTCGTCGACCAA
AATGTCATCATTAGATCTATTTTCTACTATTAAAGAAATGTTTCTCAAAT
ATAATACCATGATTCAATCCTCAGCTCCTGTAGAACGAGTATTTAGTATT
GCTGATGATATTCAAAACGCCCAAACGAACCTTTTGAATCCTTCTTTTTT
TGAAAAACTGTTATTCTTGAAATTAACAATTAATTTTTATCATCAAATTG
TGTAATTTGCAAATTCAAAACATTGATGAATAAAACCAGTTAGTTATTTC
TTTATTTTTATAAAAGACACAATTTGGGATGATGCCCTCCTGACCTTTCG
AAAATAAAAAAAATTGGTAACCGACACAAGTATAAGTGACACTCTAGTAG
TAAATATTCGTAATTTTATCAAATCATATTTGTATTCATTTTTTCAATGG
ACAAATTAGAAACTATATATATAAAATAATACGTATTTATAAAAAGTGAC
TAATTTTGTACAAAAAATTTCATACCCCATTGAATCAAAGGCTTTAATAT
TGAAGGAATACTATAGTTGAAAATAAAATGATGTGCCAGTATATTATAAA
TGAAATCGAAAATTTACGTGATAACTAAGATCATAAGAAGAATGTTTGGG
AGATAGGCAAGGATTACATCTATACCAATACTCAATTCTACTTCGATTTC
AAAAAGGAAATAATCTTATAACTCCGTAATCCTTAGTTTTACTCTTTGAC
TATGAGACACTGGTTATTACTTTATACTTTGATCTTTTTTCTTCAAGAAA
GACAGAATAATTTTGAAAATTAAAAGTATTGCAATAACAGAAAGAGCACG
ATTTTCCATTTTCATATTTTTTACTCATATTCATTTCAGTGTTCCTTGAT
CTAAGTATAATTTATAACCCTTTATTTGAGCTAATGTTATGTTTTAGTTG
TCAATTTTAAATTTGTTTATAAATTAGGATATTGAAATTAATATTTGTTA
ACATGCATTATTATGAAAAAATTATAAAAACGATATACTTGAGAAAATAA
CAATAGCCAATTTACTAGTTAAGCTTTCGATTCATGTTTAAAAGTCAACC
GTGTGTTTTTTAACCATAGTTGAAAATAATGTGGTCTTCTAGAATGCTAA
TAAACGAAGCAGAAAGTCAACTGGTCATCTTAACAATTTGAGGAATGAGA
TAGGAGAGAAGCTTAGGTGTCATGMCTTTTCATTAAGTTAGCTGCGAGWA
GATANNNNNNTGAAAGGAACAAATACAAGCCCCACTTTGTATGCAGCAAT
GATATAGGCAGGATATAATCCAAWTTCGATCGTCAATTTTACTCTTAGCT
CAATAATGACTTACACTTATAATTCCGTAACCAATCTTTAGTATTACTTT
TCATCTTTTTCACACTAATTATTACTTTATACTTTTATGTTATCTCTTCA
AGAATGATGATAACATCTTTGAAAATTAGAAACATATATTTAAGTAGGAA
CTAAACAAAGCCAGACCATTCTCCATTATAATATTAAATTCGTCTATGAC
GAATACTGTCAATTTATCCACAATTGGTGGTCCGTAATTTTATTTCATAT
TATATCAAATAAAGAAATAACAATAGGTATAAGAATCAAACTTTTATTTT
TAACGTACCATTAATCCTGCATGACTTGATTCTTCTTACTTTTTTACCTT
TTGCACTTAAATTAATTAAAATATCTTAAAGATATATGTTTTAAAAAGTG
TATTTGCTTTCTTTGTACAAAGAGATTGTAGTTAAGAGCCCCCATAAAAA
AAACATTGATCCTCATAATTCTTATGGTATTGCATCAAATTCTTGGCTCG
TAATCTTGTTAAGCATCTAGGATGCATTTGTAGGATATAATCATAAAATC
AAGTAGTAAACGTAGAAATAAAAAATTATCTTACTAAGAATTCAAATGAT
GCACGCAGCAAACTACATTTTTAAGAGTGCTTGTATAAATTATTTATATG
TTCAAATTAATATACAGGGTGTTCTATAATAACTGACATACTTTTCCAAA
CTATGTATATAAACGGTTTAAAAAAATATATATTCGATTTATTTATATGT
AGAGATAG
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