EMLSAG00000000921, EMLSAG00000000921-683687 (gene) Lepeophtheirus salmonis
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Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of EMLSAG00000000921 vs. C. finmarchicus
Match: gi|592805857|gb|GAXK01148711.1| (TSA: Calanus finmarchicus comp5963190_c0_seq1 transcribed RNA sequence) HSP 1 Score: 86.6557 bits (213), Expect = 1.689e-18 Identity = 59/140 (42.14%), Postives = 95/140 (67.86%), Query Frame = 0
Query: 69 LSYGAILVVSEMTLTXXXXXXXXXXXXXXREKESLLNSTLNIILGNLCFSNLMAXVFVKSIAIIYNGYAVASEKWSVELAFCTIHTLSARATWAVLPYSIIVLNWLFVINRATKIFCNIFPEWFFKKGRADNDQNHIESF 208
++ GA++V+ +M+L ++ I N+++I SIR+KE +L+ST N++L NLC SNL+ V KSI+I++NGYAVA+ E+AFC I++ S R TWAVLP++I++L+WL + R ++ N+ P G N N + +F
Sbjct: 35 MNQGALVVILDMSLAVISIFFNIMIISSIRDKEEMLDSTFNLVLLNLCSSNLLCAVITKSISIVHNGYAVAANVAHSEIAFCLIYSFSYRLTWAVLPWTIVLLSWLSFLPRFRRLQENLNP-----VGSTQNIHNEVSTF 439
BLAST of EMLSAG00000000921 vs. C. finmarchicus
Match: gi|592953218|gb|GAXK01005335.1| (TSA: Calanus finmarchicus comp2280790_c0_seq1 transcribed RNA sequence) HSP 1 Score: 86.6557 bits (213), Expect = 1.601e-17 Identity = 50/110 (45.45%), Postives = 76/110 (69.09%), Query Frame = 0
Query: 69 LSYGAILVVSEMTLTXXXXXXXXXXXXXXREKESLLNSTLNIILGNLCFSNLMAXVFVKSIAIIYNGYAVASEKWSVELAFCTIHTLSARATWAVLPYSIIVLNWLFVIN 178
L G ++V+++M+L + +V+NLIVI I+E+E+ + N++L NLC SNL + V VKSI+I++NGYAVA+ +AFC I +S RATWAVLP++I +W+ N
Sbjct: 111 LERGGVVVLTDMSLAVCSVVVNLIVITGIKEREATM-GMFNLVLVNLCLSNLTSAVLVKSISIVHNGYAVAANTTQSNIAFCNIMIVSYRATWAVLPWTIFTFSWMIFAN 437 HSP 2 Score: 61.6178 bits (148), Expect = 1.906e-9 Identity = 57/195 (29.23%), Postives = 98/195 (50.26%), Query Frame = 0
Query: 244 LGVIQKSILGFIWFVSFVYSLLSPQIFGKTSNSCVLRDPLDSKLNXXXXXXXXXXXXFFGPVICSLAQILLSFVECIIRSKCISTNELPSMNDHNCLNYSKXXXXXXXXXXXXXXXEYPISMFFVEEYIEKRETIFVFMLLKYVLGYMHIVIIPLFIIIMRKDIFNAANSVLSQKSIANQQEDDITFEQFQTHCG 438
L +++KS+L +W +S VYS+L+PQ+ + C +R+ S L +S+ + + +P+ FGPV LA + L+ V + S + + K F L+T++F++ Y I+M F E Y E I F+L+KY G +H + P+ I++ KDI + V + + DIT E+ + G
Sbjct: 704 LSLLEKSLLVLVWTMSMVYSILTPQLV--SDQECDVREDPFSTLGTVSVFMALVLPLIFGPVAAILA-VCLATVFSFFGGRRKSDD------------FHKAHIFCLVLLTVMFVITYAINMVFCEIYFEYINNIMYFILIKYCFGTLHHFLGPVIILLSYKDIRQSVVKVFLKGGTNQNESKDITDEEMKKELG 1243
BLAST of EMLSAG00000000921 vs. C. finmarchicus
Match: gi|592950192|gb|GAXK01008361.1| (TSA: Calanus finmarchicus comp2369066_c0_seq2 transcribed RNA sequence) HSP 1 Score: 85.5001 bits (210), Expect = 6.167e-17 Identity = 35/80 (43.75%), Postives = 55/80 (68.75%), Query Frame = 0
Query: 98 REKESLLNSTLNIILGNLCFSNLMAXVFVKSIAIIYNGYAVASEKWSVELAFCTIHTLSARATWAVLPYSIIVLNWLFVI 177
R E + NST N++L NLCFSNL+ VK I+ IY GY++++ W V L FC++ T+ R TW +LP++I+ +WL+++
Sbjct: 301 RHHEEMQNSTTNLLLINLCFSNLLISFLVKPISAIYAGYSMSTGSWQVSLVFCSMFTMIYRTTWCILPFTIVAFSWLYIL 540
BLAST of EMLSAG00000000921 vs. C. finmarchicus
Match: gi|592950193|gb|GAXK01008360.1| (TSA: Calanus finmarchicus comp2369066_c0_seq1 transcribed RNA sequence) HSP 1 Score: 85.1149 bits (209), Expect = 7.806e-17 Identity = 35/80 (43.75%), Postives = 55/80 (68.75%), Query Frame = 0
Query: 98 REKESLLNSTLNIILGNLCFSNLMAXVFVKSIAIIYNGYAVASEKWSVELAFCTIHTLSARATWAVLPYSIIVLNWLFVI 177
R E + NST N++L NLCFSNL+ VK I+ IY GY++++ W V L FC++ T+ R TW +LP++I+ +WL+++
Sbjct: 301 RHHEEMQNSTTNLLLINLCFSNLLISFLVKPISAIYAGYSMSTGSWQVSLVFCSMFTMIYRTTWCILPFTIVAFSWLYIL 540
BLAST of EMLSAG00000000921 vs. C. finmarchicus
Match: gi|592800319|gb|GAXK01154249.1| (TSA: Calanus finmarchicus comp7556716_c0_seq1 transcribed RNA sequence) HSP 1 Score: 79.7221 bits (195), Expect = 8.355e-17 Identity = 36/81 (44.44%), Postives = 58/81 (71.60%), Query Frame = 0
Query: 109 NIILGNLCFSNLMAXVFVKSIAIIYNGYAVASEKWSVELAFCTIHTLSARATWAVLPYSIIVLNWLFVINRATKIFCNIFP 189
N++L NLC SNL++ V VKSI+I++N YAVA+ ++AFC +++ R TW+VLP+S++VL WL V+ R ++ ++ P
Sbjct: 6 NLVLINLCSSNLLSAVMVKSISIVHNAYAVAANSTQSDIAFCILYSFGYRLTWSVLPWSVVVLCWLTVLPRWRRLQVDLAP 248
BLAST of EMLSAG00000000921 vs. C. finmarchicus
Match: gi|592817649|gb|GAXK01136919.1| (TSA: Calanus finmarchicus comp3479851_c0_seq1 transcribed RNA sequence) HSP 1 Score: 77.0258 bits (188), Expect = 1.054e-14 Identity = 83/322 (25.78%), Postives = 142/322 (44.10%), Query Frame = 0
Query: 158 RATWAVLPYSIIVLNWLFVINRATKI-------------------------------FCNI--FPEWFFKKGRADNDQNHIESFELEV--TRKEGDNKSXXXXXXXXXXXXXXXXYSGIDGLGVIQKSILGFIWFVSFVYSLLSPQIFGKTSN-SCVLRDPLDSKLNXXXXXXXXXXXXFFGPVICSLAQILLSFVECIIRSKCISTNELPSMNDHNCLNYSKXXXXXXXXXXXXXXXEYPISMFFVEEYIEKRETIFVFMLLKYVLGYMHIVIIPLFIIIMRKDIFNAANSVLSQKSIANQQED-DITFEQFQTHCGMGVN 442
R TWAV+P+SI++L+WL +R I F N+ P F +H +S T EGD K +G D K++LG++W ++ VY ++S Q+ K N C +R+ + S ++I SL+ + IP+ GPV +A L+ +E I+ + +P D L ++T+I ++ Y SM E + + E F F++LKYV G H + PL ++ +R D++ V+ +K +NQ ++ ++T+E+ Q G+GV+
Sbjct: 5 RTTWAVVPWSIVLLSWLSTQHRILHIKEVLKERSKPSLSQENSGLVEDEGILLEFSKFSNLGRRPTVFGSSSLRSAVHSHPDSGRTSRADTEMEGDRK-----------------LTGKD------KAVLGYVWTMAVVYGMMSEQMLSKEVNRPCSVREQIYSSISIASLMFGLIIPLTVGPVAVIIAHFTLNILESILDT---GPAVIPKKEDLPSL-------ICILVLTIICLITYSCSMVIAEAFAQIYENPFNFIMLKYVFGTFHHFLCPLSLLCIRSDLWELCK-VVYKKGGSNQNKNIEMTYEEMQKQLGLGVD 868
BLAST of EMLSAG00000000921 vs. C. finmarchicus
Match: gi|592930937|gb|GAXK01027616.1| (TSA: Calanus finmarchicus comp6427162_c0_seq1 transcribed RNA sequence) HSP 1 Score: 70.0922 bits (170), Expect = 1.481e-13 Identity = 41/92 (44.57%), Postives = 68/92 (73.91%), Query Frame = 0
Query: 59 WFGNEDNVSNLSYGAILVVSEMTLTXXXXXXXXXXXXXXREKESLLNSTLNIILGNLCFSNLMAXVFVKSIAIIYNGYAVASEKWSVELAFC 150
W G++ + GAI+V+++M L+L+ +VLNL+V+ ++RE++ LL T N++LGN+C SNL++ V VKSI+I+++GYAVA+ +AFC
Sbjct: 1 WLGHQ-MTDAMVEGAIMVLTDMGLSLISVVLNLMVLNALRERDILLTKTHNLVLGNICASNLVSAVLVKSISIVHHGYAVAARVTQSNIAFC 273
BLAST of EMLSAG00000000921 vs. C. finmarchicus
Match: gi|592814112|gb|GAXK01140456.1| (TSA: Calanus finmarchicus comp1127096_c0_seq1 transcribed RNA sequence) HSP 1 Score: 67.0106 bits (162), Expect = 3.305e-11 Identity = 83/362 (22.93%), Postives = 163/362 (45.03%), Query Frame = 0
Query: 68 NLSYGAILVVSEMTLTXXXXXXXXXXXXXXREKESLLNSTLNIILGNLCFSNLMAXVFVKSIAIIYNGYAVASEKWSVELAFCTIHTLSARATWAVLPYSIIVLNWLFVINRATKIFCNIFPEWFFKKGRADNDQNHIESFELEVTRKEGDNKSXXXXXXXXXXXXXXXXYSGIDGLGVI----------QKSILGFIWFVSFVYSLLSPQIFGKTSN-SCVLRDPLDSKLNXXXXXXXXXXXXFFGPVICSLAQILLSFVECIIRSKCISTNELPSMNDHNCLNYSKXXXXXXXXXXXXXXXEYPISMFFVEEYIEKRETIFVFMLLKYVLGYMHIVIIPLFIIIMRKDIFNAANSVLSQK 418
+L G++LV+++M T+V I+LNL V++++RE + + ++ N + N+ +NL+ V VKS +++ G A A+++ S+ LAFC T++ R AV P++++V+ W+ +W ++ + Q+ SF++E ++ +K+ + E E + ++ K LG IW +S + S Q ++ N C L + S + I+S+++ PV LL+ C++ K S +L N ++ T L + P S+ Y + + M++K+ L HI+ P+ I+ MR + A + ++
Sbjct: 139 SLYIGSLLVLADMATTVVAIILNLSVVLALRETQEMTSNHQNFLQLNMVLNNLLICVLVKSFEVVFTGLAAATQQTSLSLAFCNFLTVTQRMCMAVSPWTVVVMVWV---------------DWNERRKEQEKWQDPCSSFQIE--DEDASDKTNTKMTEVEILSARNLPQFPLRKNSILSMEENQFQDHHKKKLGIIWGMSLICGFCSEQALDQSKNPPCSLTRRMTSPVEIVSILLAY-------PV-----PALLTLGPCMMSLKVFSPLQLLPNNP-----ITRTTRTSLILSMCYIMSILP-SLLAELMYTNSNHHLAIMMVIKFSLASFHIIFEPIVILYMRPPLMIALRVIFRRQ 1119
BLAST of EMLSAG00000000921 vs. C. finmarchicus
Match: gi|592905769|gb|GAXK01052606.1| (TSA: Calanus finmarchicus comp5766810_c0_seq1 transcribed RNA sequence) HSP 1 Score: 63.1586 bits (152), Expect = 1.009e-10 Identity = 34/102 (33.33%), Postives = 64/102 (62.75%), Query Frame = 0
Query: 72 GAILVVSEMTLTXXXXXXXXXXXXXXREKESLLNSTLNIILGNLCFSNLMAXVFVKSIAIIYNGYAVASEKWSVELAFCTIHTLSARATWAVLPYSIIVLNW 173
I+V+S+MTL +G LN ++++++++ L ST +++L NLCFSN+ +K + I+ GYA A + +V L+FC ++T + +P+S++ L+W
Sbjct: 127 AVIIVLSQMTLAFLGAFLNSLLLVTLKDLPDLCASTYHVLLANLCFSNIFTCTVLKPVTGIFTGYAYAKTQDTVGLSFCQLYTFLSGTFLPCVPWSVLALSW 432
BLAST of EMLSAG00000000921 vs. C. finmarchicus
Match: gi|592830214|gb|GAXK01127330.1| (TSA: Calanus finmarchicus comp917273_c0_seq1 transcribed RNA sequence) HSP 1 Score: 60.077 bits (144), Expect = 7.176e-10 Identity = 48/113 (42.48%), Postives = 72/113 (63.72%), Query Frame = 0
Query: 74 ILVVSEMTLTXXXXXXXXXXXXXXREKESLLNSTLNIILGNLCFSNLMAXVFVKSIAIIYNGYAVASEKWSVELAFCTIHTLSARATWAVLPYSIIVLNWLFVINRATKI-FC 185
ILV+ EM ++GI +NL+V S+R + L ST N+++ N+CFSN++ VK I+ IY YA+++ +W V LAFCT++TL+ R TW P S++ L W + KI FC
Sbjct: 30 ILVMIEMVSAVIGIFVNLMVFSSVRNLDYLQESTSNLLITNICFSNILISFLVKPISAIYVSYALSTGEWHVGLAFCTLYTLTYRTTWLAFPLSVVSLCWDSLNTHCNKISFC 368
BLAST of EMLSAG00000000921 vs. L. salmonis peptides
Match: EMLSAP00000000921 (pep:novel supercontig:LSalAtl2s:LSalAtl2s115:778508:802604:1 gene:EMLSAG00000000921 transcript:EMLSAT00000000921 description:"maker-LSalAtl2s115-augustus-gene-7.12") HSP 1 Score: 893.649 bits (2308), Expect = 0.000e+0 Identity = 444/444 (100.00%), Postives = 444/444 (100.00%), Query Frame = 0
Query: 1 MNLYLRLAKLIEMGLIQHWKVEMSQISLKVDENDYYRMFISAEVNSTVSQWIESIFNKWFGNEDNVSNLSYGAILVVSEMTLTLVGIVLNLIVIISIREKESLLNSTLNIILGNLCFSNLMAXVFVKSIAIIYNGYAVASEKWSVELAFCTIHTLSARATWAVLPYSIIVLNWLFVINRATKIFCNIFPEWFFKKGRADNDQNHIESFELEVTRKEGDNKSELEEIEKEEEDYEVEEYSGIDGLGVIQKSILGFIWFVSFVYSLLSPQIFGKTSNSCVLRDPLDSKLNILSLIIIIPIPIFFGPVICSLAQILLSFVECIIRSKCISTNELPSMNDHNCLNYSKITYFLTFLITLIFILEYPISMFFVEEYIEKRETIFVFMLLKYVLGYMHIVIIPLFIIIMRKDIFNAANSVLSQKSIANQQEDDITFEQFQTHCGMGVNPT 444
MNLYLRLAKLIEMGLIQHWKVEMSQISLKVDENDYYRMFISAEVNSTVSQWIESIFNKWFGNEDNVSNLSYGAILVVSEMTLTLVGIVLNLIVIISIREKESLLNSTLNIILGNLCFSNLMAXVFVKSIAIIYNGYAVASEKWSVELAFCTIHTLSARATWAVLPYSIIVLNWLFVINRATKIFCNIFPEWFFKKGRADNDQNHIESFELEVTRKEGDNKSELEEIEKEEEDYEVEEYSGIDGLGVIQKSILGFIWFVSFVYSLLSPQIFGKTSNSCVLRDPLDSKLNILSLIIIIPIPIFFGPVICSLAQILLSFVECIIRSKCISTNELPSMNDHNCLNYSKITYFLTFLITLIFILEYPISMFFVEEYIEKRETIFVFMLLKYVLGYMHIVIIPLFIIIMRKDIFNAANSVLSQKSIANQQEDDITFEQFQTHCGMGVNPT
Sbjct: 1 MNLYLRLAKLIEMGLIQHWKVEMSQISLKVDENDYYRMFISAEVNSTVSQWIESIFNKWFGNEDNVSNLSYGAILVVSEMTLTLVGIVLNLIVIISIREKESLLNSTLNIILGNLCFSNLMAXVFVKSIAIIYNGYAVASEKWSVELAFCTIHTLSARATWAVLPYSIIVLNWLFVINRATKIFCNIFPEWFFKKGRADNDQNHIESFELEVTRKEGDNKSELEEIEKEEEDYEVEEYSGIDGLGVIQKSILGFIWFVSFVYSLLSPQIFGKTSNSCVLRDPLDSKLNILSLIIIIPIPIFFGPVICSLAQILLSFVECIIRSKCISTNELPSMNDHNCLNYSKITYFLTFLITLIFILEYPISMFFVEEYIEKRETIFVFMLLKYVLGYMHIVIIPLFIIIMRKDIFNAANSVLSQKSIANQQEDDITFEQFQTHCGMGVNPT 444
BLAST of EMLSAG00000000921 vs. Tigriopus kingsejongenis genes
Match: snap_masked-scaffold213_size254208-processed-gene-0.6 (protein:Tk11724 transcript:snap_masked-scaffold213_size254208-processed-gene-0.6-mRNA-1 annotation:"laminin subunit partial") HSP 1 Score: 116.316 bits (290), Expect = 8.017e-28 Identity = 53/123 (43.09%), Postives = 80/123 (65.04%), Query Frame = 0
Query: 66 VSNLSYGAILVVSEMTLTLVGIVLNLIVIISIREKESLLNSTLNIILGNLCFSNLMAXVFVKSIAIIYNGYAVASEKWSVELAFCTIHTLSARATWAVLPYSIIVLNWLFVINRATKIFCNIF 188
+ N + ILV+ EM L+ GIV NL+V+ ++R+ ESL ST+N +L NLCFSNL+ VK I+ IY GYA+++ +W V LAFCT++T + R TW V P+S++ + W ++ + C I
Sbjct: 1 MENSAQCVILVLLEMGLSFSGIVCNLLVVTTLRQDESLNASTMNFLLLNLCFSNLLISFLVKPISAIYVGYAISTGEWQVGLAFCTLYTFTYRTTWCVFPFSLVAMCWCKLLTQCKCGLCGIL 123 HSP 2 Score: 56.9954 bits (136), Expect = 1.027e-8 Identity = 59/288 (20.49%), Postives = 119/288 (41.32%), Query Frame = 0
Query: 202 QNHIESFELEVTRKEGDNKS-ELEEIEKEEEDYEVEEYSGIDGLGVIQKSILGFIWFVSFVYSLLS---PQIFG-------------------KTSNS-----CVLRDPLDSKLNILSLIIIIPIPIFFGPVICSLAQILLSFVECIIRSKCIST--NELPSMNDHNCLNYSKITYF-------------LTFLITLIFILEYPISMFFVEEYIEKRETIFVFMLLKYVLGYMHIVIIPLFIIIMRKDIFNAANSVLSQK--------SIANQQEDDITFEQFQTHCG 438
QN E E + R++ N + + +EK + +E DG QK ++ FIW S + + + ++FG T S C +R ++ L+ ++L++ + +P+ GP + + Q+L + R C S+ ++L + + + +F + TL+F + Y + M+ E YI+ F+F+ +KY +G++ ++ +PL + + K+I + SV I N++ +T + H G
Sbjct: 252 QNQEEDNEDDEAREQLMNPNFNVFAMEKRKHRRTIE-----DGPTARQKVLVAFIWLGSAFFGITTCFPDKVFGVEISQKILQDQLRTIEPSLGTPRSTDLTYCTVRTGVNDLLDYIALVVALILPLVVGPGLVGVFQVLFALFG---RFFCQSSHLSQLDNSGMGGSGSGGRNIFFQQNQSPNVLGGWGIIIGFTLVFGITYSLHMYVAEVYIQDN---FMFLFVKYCIGFLFVIFVPLITLTLEKEIRSGITSVFGSAVLCLQDIGEIDNEEPAQVTITEPPQHSG 528 The following BLAST results are available for this feature:
BLAST of EMLSAG00000000921 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO) Total hits: 0
BLAST of EMLSAG00000000921 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA) Total hits: 19
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BLAST of EMLSAG00000000921 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self) Total hits: 1
BLAST of EMLSAG00000000921 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt) Total hits: 0
BLAST of EMLSAG00000000921 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods) Total hits: 0
BLAST of EMLSAG00000000921 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017)) Total hits: 0
BLAST of EMLSAG00000000921 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins) Total hits: 1
Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Cross References
External references for this gene
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at LSalAtl2s115:778508..802604+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>EMLSAG00000000921-683687 ID=EMLSAG00000000921-683687|Name=EMLSAG00000000921|organism=Lepeophtheirus salmonis|type=gene|length=24097bp|location=Sequence derived from alignment at LSalAtl2s115:778508..802604+ (Lepeophtheirus salmonis)back to top Add to Basket
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