EMLSAG00000000943, EMLSAG00000000943-683709 (gene) Lepeophtheirus salmonis

Overview


Name	EMLSAG00000000943
Unique Name	EMLSAG00000000943-683709
Type	gene
Organism	Lepeophtheirus salmonis (salmon louse)

Associated RNAi Experiments

Nothing found

Homology

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BLAST of EMLSAG00000000943 vs. GO
Match: - (symbol:LOC100621709 "Uncharacterized protein" species:9823 "Sus scrofa" [GO:0005484 "SNAP receptor activity" evidence=IEA] [GO:0006886 "intracellular protein transport" evidence=IEA] [GO:0016020 "membrane" evidence=IEA] InterPro:IPR006012 PROSITE:PS00914 GO:GO:0006886 GO:GO:0016020 InterPro:IPR019529 Pfam:PF10496 OMA:IFMRTCA TreeFam:TF105868 GeneTree:ENSGT00390000014853 OrthoDB:EOG79KPFJ Ensembl:ENSSSCT00000026563 Uniprot:I3L7R7)

HSP 1 Score: 81.2629 bits (199), Expect = 6.141e-17
Identity = 62/213 (29.11%), Postives = 106/213 (49.77%), Query Frame = 0

Query:   65 LSSEERDEIENGALSLLRTTKLLITKLKKDVDNTSNIGSQVKTH----------FLGDVSKNFTKQKEIRLESMGMTREMSRLH-----DGSSLFSPD-----PHNNETGYAEDEEYL--------------------EEELSPDEIQLFQKENXTMYEELRKTQTEVQSIENKVVKIAELQELFSEKILEQKDDIDLVSRNALAASENIKDG 237
            ++  ERD+I+  A + +RT    I +L+    +      QVK H          +L  V K +++Q+ IR++ +   + +S+L            SP+     P  +       EEY                     E+ELSP+E+Q+F++EN  +  E+     EV+ IE KVV+I+ LQE+F+EK+L+Q+ +ID + +  + A+ENIK+G
Sbjct:   32 MTDTERDQIDQDAQTFMRTCSEAIQQLRAQA-HKEVPSQQVKEHRSAVLDFIEDYLKRVCKLYSEQRAIRVKRVVDKKRLSKLEPEPNTKARESMSPEKVSQSPSKDSEEKPATEEYSAEKIPAEAQPELGTWGDGKGEDELSPEEVQMFEQENQRLIGEMNSLFDEVRQIEGKVVEISRLQEIFTEKVLQQEAEIDSIHQLVVGATENIKEG 243

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BLAST of EMLSAG00000000943 vs. GO
Match: - (symbol:Syx18 "Syntaxin 18" species:7227 "Drosophila melanogaster" [GO:0005484 "SNAP receptor activity" evidence=ISS;NAS] [GO:0016192 "vesicle-mediated transport" evidence=ISS;NAS] [GO:0005886 "plasma membrane" evidence=NAS] [GO:0007269 "neurotransmitter secretion" evidence=NAS] [GO:0007274 "neuromuscular synaptic transmission" evidence=IMP] [GO:0005938 "cell cortex" evidence=IDA] [GO:0031594 "neuromuscular junction" evidence=IDA] [GO:0007528 "neuromuscular junction development" evidence=IMP] [GO:0031201 "SNARE complex" evidence=ISS] [GO:0000149 "SNARE binding" evidence=ISS] InterPro:IPR000727 PROSITE:PS50192 EMBL:AE014297 GO:GO:0005938 GO:GO:0007528 GO:GO:0007274 GO:GO:0031594 GO:GO:0016192 GO:GO:0005484 eggNOG:NOG271515 KO:K08492 InterPro:IPR019529 Pfam:PF10496 GeneTree:ENSGT00390000014853 OrthoDB:EOG79KPFJ EMBL:AY051876 RefSeq:NP_524485.1 UniGene:Dm.1652 SMR:Q9VC58 IntAct:Q9VC58 MINT:MINT-1565292 STRING:7227.FBpp0084050 EnsemblMetazoa:FBtr0084670 GeneID:42933 KEGG:dme:Dmel_CG13626 UCSC:CG13626-RA CTD:42933 FlyBase:FBgn0039212 InParanoid:Q9VC58 OMA:KSAAHMT GenomeRNAi:42933 NextBio:831349 PRO:PR:Q9VC58 Uniprot:Q9VC58)

HSP 1 Score: 77.0258 bits (188), Expect = 8.273e-15
Identity = 36/87 (41.38%), Postives = 58/87 (66.67%), Query Frame = 0

Query:  166 LSPDEIQLFQKENXTMYEELRKTQTEVQSIENKVVKIAELQELFSEKILEQKDDIDLVSRNALAASENIKDGNEELRKAIQNKASIR 252
            LS +++QLF+ EN  +Y  L+    EV+ IE  VV IA+LQ++F+EK+  Q+ +ID +    +  +EN+KD NE++R+A Q  A +R
Sbjct:  287 LSAEDVQLFEAENVHIYNFLQGVSEEVEQIEKNVVDIAQLQDIFTEKVAMQQHNIDRIVSAVVGTTENVKDANEQIRQATQRNAGLR 373

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BLAST of EMLSAG00000000943 vs. GO
Match: - (symbol:syx-18 species:6239 "Caenorhabditis elegans" [GO:0002119 "nematode larval development" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] InterPro:IPR000727 PROSITE:PS50192 KO:K08492 GeneTree:ENSGT00390000014853 OrthoDB:EOG79KPFJ EMBL:FO081382 PIR:T33238 RefSeq:NP_504687.1 UniGene:Cel.24498 ProteinModelPortal:O76413 SMR:O76413 DIP:DIP-25036N IntAct:O76413 MINT:MINT-1104201 STRING:6239.T10H9.3 PaxDb:O76413 PRIDE:O76413 EnsemblMetazoa:T10H9.3 GeneID:179055 KEGG:cel:CELE_T10H9.3 UCSC:T10H9.3 CTD:179055 WormBase:T10H9.3 eggNOG:NOG237073 HOGENOM:HOG000021506 InParanoid:O76413 OMA:KHIRRHN NextBio:903712 PRO:PR:O76413 Uniprot:O76413)

HSP 1 Score: 61.6178 bits (148), Expect = 1.365e-9
Identity = 29/67 (43.28%), Postives = 43/67 (64.18%), Query Frame = 0

Query:  191 EVQSIENKVVKIAELQELFSEKILEQKDDIDLVSRNALAASENIKDGNEELRKAIQNKASIRNLLTY 257
            E+  ++  + +IA L  +FSEK+LEQ  D++L+  +AL  +ENI DGNE +RKAI N    R  L +
Sbjct:  332 EILKLQQHLTEIASLHTVFSEKVLEQDRDVELIHDHALHTTENITDGNEWIRKAITNSGKQRAFLLF 398

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BLAST of EMLSAG00000000943 vs. GO
Match: - (symbol:AO090011000678 "Predicted protein" species:510516 "Aspergillus oryzae RIB40" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575 "cellular_component" evidence=ND] [GO:0008150 "biological_process" evidence=ND] InterPro:IPR000727 PROSITE:PS50192 EMBL:AP007171 InterPro:IPR019529 Pfam:PF10496 OrthoDB:EOG7B5X75 ProteinModelPortal:Q2TZX6 EnsemblFungi:CADAORAT00005398 OMA:AYRINTH Uniprot:Q2TZX6)

HSP 1 Score: 51.9878 bits (123), Expect = 2.142e-6
Identity = 36/126 (28.57%), Postives = 66/126 (52.38%), Query Frame = 0

Query:  144 FSPDPHNNETGYAEDEE---YLEEELSPDEIQLFQKENXTMYEELRKTQTEVQSIENKVVKIAELQELFSEKILEQKDDIDLVSRNALAASENIKDGNEELRKAIQNKASIRNLLTYLNYNGTFKL 266
            F+ D      G   DE     +EEELS +++QLF+ EN  M      T ++VQ+ E  +++I+ LQ+     +  Q++ I  +  +A +   NI  GN+EL++A + +++ + +     + GT  L
Sbjct:  218 FAVDDTVGLKGAGMDESEVRAIEEELSAEQLQLFEAENDAMVRYYEDTLSKVQNAEKSLLEISSLQQTLVSHLSTQEEYISQLVTDAESTQTNIGRGNKELKRASERRSAAQAV-----FWGTVGL 338

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BLAST of EMLSAG00000000943 vs. GO
Match: - (symbol:ufe1 species:5062 "Aspergillus oryzae" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575 "cellular_component" evidence=ND] [GO:0008150 "biological_process" evidence=ND] InterPro:IPR000727 PROSITE:PS50192 EMBL:AP007171 InterPro:IPR019529 Pfam:PF10496 OrthoDB:EOG7B5X75 ProteinModelPortal:Q2TZX6 EnsemblFungi:CADAORAT00005398 OMA:AYRINTH Uniprot:Q2TZX6)

HSP 1 Score: 51.9878 bits (123), Expect = 2.142e-6
Identity = 36/126 (28.57%), Postives = 66/126 (52.38%), Query Frame = 0

Query:  144 FSPDPHNNETGYAEDEE---YLEEELSPDEIQLFQKENXTMYEELRKTQTEVQSIENKVVKIAELQELFSEKILEQKDDIDLVSRNALAASENIKDGNEELRKAIQNKASIRNLLTYLNYNGTFKL 266
            F+ D      G   DE     +EEELS +++QLF+ EN  M      T ++VQ+ E  +++I+ LQ+     +  Q++ I  +  +A +   NI  GN+EL++A + +++ + +     + GT  L
Sbjct:  218 FAVDDTVGLKGAGMDESEVRAIEEELSAEQLQLFEAENDAMVRYYEDTLSKVQNAEKSLLEISSLQQTLVSHLSTQEEYISQLVTDAESTQTNIGRGNKELKRASERRSAAQAV-----FWGTVGL 338

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BLAST of EMLSAG00000000943 vs. GO
Match: - (symbol:AFUA_2G09670 "SNARE protein (Ufe1), putative" species:330879 "Aspergillus fumigatus Af293" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575 "cellular_component" evidence=ND] [GO:0008150 "biological_process" evidence=ND] EMBL:AAHF01000001 InterPro:IPR019529 Pfam:PF10496 OrthoDB:EOG7B5X75 HOGENOM:HOG000162861 OMA:AYRINTH RefSeq:XP_755300.1 STRING:5085.CADAFUAP00004674 EnsemblFungi:CADAFUAT00004674 GeneID:3513628 KEGG:afm:AFUA_2G09670 Uniprot:Q4X1K3)

HSP 1 Score: 51.2174 bits (121), Expect = 4.419e-6
Identity = 36/142 (25.35%), Postives = 70/142 (49.30%), Query Frame = 0

Query:  139 DGSSLFSPDPHNNETGYAEDE-EYLEEELSPDEIQLFQKENXTMYEELRKTQTEVQSI-------------ENKVVKIAELQELFSEKILEQKDDIDLVSRNALAASENIKDGNEELRKAIQNKASIRNLLTYLNYNGTFKL 266
             G    + DPH   +  +E E   +E ELSP+++QLF +EN  +  +     ++VQ +             E  +++I+ LQ+     +  Q++ I+ +  +A   + NI  GN+EL++A Q +++ + +     + GT  L
Sbjct:  238 SGPGPATADPHLRGSTLSETETAAIEAELSPEQLQLFAEENDLLLRQYEDALSKVQYVTFYSSLTLWRRNAEKSLLEISSLQQTLVSHLSTQEEYIEQLVMDASTTTTNIGQGNKELKRATQRRSTAQAV-----FWGTVGL 374

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BLAST of EMLSAG00000000943 vs. GO
Match: - (symbol:Afu2g09670 species:746128 "Aspergillus fumigatus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575 "cellular_component" evidence=ND] [GO:0008150 "biological_process" evidence=ND] EMBL:AAHF01000001 InterPro:IPR019529 Pfam:PF10496 OrthoDB:EOG7B5X75 HOGENOM:HOG000162861 OMA:AYRINTH RefSeq:XP_755300.1 STRING:5085.CADAFUAP00004674 EnsemblFungi:CADAFUAT00004674 GeneID:3513628 KEGG:afm:AFUA_2G09670 Uniprot:Q4X1K3)

HSP 1 Score: 51.2174 bits (121), Expect = 4.419e-6
Identity = 36/142 (25.35%), Postives = 70/142 (49.30%), Query Frame = 0

Query:  139 DGSSLFSPDPHNNETGYAEDE-EYLEEELSPDEIQLFQKENXTMYEELRKTQTEVQSI-------------ENKVVKIAELQELFSEKILEQKDDIDLVSRNALAASENIKDGNEELRKAIQNKASIRNLLTYLNYNGTFKL 266
             G    + DPH   +  +E E   +E ELSP+++QLF +EN  +  +     ++VQ +             E  +++I+ LQ+     +  Q++ I+ +  +A   + NI  GN+EL++A Q +++ + +     + GT  L
Sbjct:  238 SGPGPATADPHLRGSTLSETETAAIEAELSPEQLQLFAEENDLLLRQYEDALSKVQYVTFYSSLTLWRRNAEKSLLEISSLQQTLVSHLSTQEEYIEQLVMDASTTTTNIGQGNKELKRATQRRSTAQAV-----FWGTVGL 374

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BLAST of EMLSAG00000000943 vs. GO
Match: - (symbol:SYP81 "syntaxin of plants 81" species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM] [GO:0000226 "microtubule cytoskeleton organization" evidence=RCA] InterPro:IPR010989 GO:GO:0016021 EMBL:CP002684 EMBL:AC025294 GO:GO:0015031 GO:GO:0016192 SUPFAM:SSF47661 eggNOG:NOG271515 KO:K08492 InterPro:IPR019529 Pfam:PF10496 EMBL:BT002917 EMBL:BT004352 EMBL:AY086569 RefSeq:NP_564597.1 UniGene:At.37765 ProteinModelPortal:P59277 SMR:P59277 IntAct:P59277 PaxDb:P59277 PRIDE:P59277 EnsemblPlants:AT1G51740.1 GeneID:841599 KEGG:ath:AT1G51740 GeneFarm:3898 TAIR:AT1G51740 HOGENOM:HOG000005979 InParanoid:P59277 OMA:QIKEHRG PhylomeDB:P59277 ProtClustDB:CLSN2688688 PRO:PR:P59277 Genevestigator:P59277 Uniprot:P59277)

HSP 1 Score: 44.669 bits (104), Expect = 4.895e-4
Identity = 27/84 (32.14%), Postives = 48/84 (57.14%), Query Frame = 0

Query:  169 DEIQLFQKENXTMYEELRKTQTEVQSIENKVVKIAELQELFSEKILEQKDDIDLVSRNALAASENIKDGNEELRKAIQNKASIR 252
            DE Q  Q E   + +  R+T+T       K+V+++ L  L +  +L+Q   I+ +   A+ A++N++ GN+EL +AIQ  +S R
Sbjct:  213 DETQALQVELSNLLDGARQTET-------KMVEMSALNHLMATHVLQQAQQIEFLYDQAVEATKNVELGNKELSQAIQRNSSSR 289

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BLAST of EMLSAG00000000943 vs. C. finmarchicus
Match: gi|592830381|gb|GAXK01127163.1| (TSA: Calanus finmarchicus comp47952_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 84.7297 bits (208), Expect = 4.386e-18
Identity = 42/94 (44.68%), Postives = 65/94 (69.15%), Query Frame = 0

Query:  173 LFQKENXTMYEELRKTQTEVQSIENKVVKIAELQELFSEKILEQKDDIDLVSRNALAASENIKDGNEELRKAIQNKASIRNLLTYLNYNGTFKL 266
            + + EN  + ++L      V+ +++KVVKIAELQ +F+EK+LEQ DDI+ V  + +A++ENIK GNE +R+AIQNKAS R  + ++    +F L
Sbjct:  785 MMEMENERLVDQLNSLNNAVEQVQSKVVKIAELQSIFTEKVLEQADDIERVHADTVASTENIKGGNEAVRQAIQNKASYRVYILFIILVFSFSL 1066

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BLAST of EMLSAG00000000943 vs. L. salmonis peptides
Match: EMLSAP00000000943 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1166:162994:164031:1 gene:EMLSAG00000000943 transcript:EMLSAT00000000943 description:"snap_masked-LSalAtl2s1166-processed-gene-1.14")

HSP 1 Score: 534.258 bits (1375), Expect = 0.000e+0
Identity = 266/266 (100.00%), Postives = 266/266 (100.00%), Query Frame = 0

Query:    1 MVDITEQFRXCLSDISRRPGIEPLDKDRILKPRKPPHTFSVQARSILGDINKVDRFLKEENMSDLSSEERDEIENGALSLLRTTKLLITKLKKDVDNTSNIGSQVKTHFLGDVSKNFTKQKEIRLESMGMTREMSRLHDGSSLFSPDPHNNETGYAEDEEYLEEELSPDEIQLFQKENXTMYEELRKTQTEVQSIENKVVKIAELQELFSEKILEQKDDIDLVSRNALAASENIKDGNEELRKAIQNKASIRNLLTYLNYNGTFKL 266
            MVDITEQFRXCLSDISRRPGIEPLDKDRILKPRKPPHTFSVQARSILGDINKVDRFLKEENMSDLSSEERDEIENGALSLLRTTKLLITKLKKDVDNTSNIGSQVKTHFLGDVSKNFTKQKEIRLESMGMTREMSRLHDGSSLFSPDPHNNETGYAEDEEYLEEELSPDEIQLFQKENXTMYEELRKTQTEVQSIENKVVKIAELQELFSEKILEQKDDIDLVSRNALAASENIKDGNEELRKAIQNKASIRNLLTYLNYNGTFKL
Sbjct:    1 MVDITEQFRXCLSDISRRPGIEPLDKDRILKPRKPPHTFSVQARSILGDINKVDRFLKEENMSDLSSEERDEIENGALSLLRTTKLLITKLKKDVDNTSNIGSQVKTHFLGDVSKNFTKQKEIRLESMGMTREMSRLHDGSSLFSPDPHNNETGYAEDEEYLEEELSPDEIQLFQKENXTMYEELRKTQTEVQSIENKVVKIAELQELFSEKILEQKDDIDLVSRNALAASENIKDGNEELRKAIQNKASIRNLLTYLNYNGTFKL 266

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BLAST of EMLSAG00000000943 vs. SwissProt
Match: gi|82226253|sp|Q4VBI7.1|STX18_DANRE (RecName: Full=Syntaxin-18)

HSP 1 Score: 125.946 bits (315), Expect = 2.891e-33
Identity = 83/271 (30.63%), Postives = 148/271 (54.61%), Query Frame = 0

Query:   31 KPR-KPPHTFSVQARSILGDINKVDRFLKEEN-------------MSDLSSEERDEIENGALSLLRTTKLLITKLKKDVDNTSNIGSQVKTH----------FLGDVSKNFTKQKEIRLESMGMTREMSRLH-----------DGSSLFSPDPHNNETGYAEDEEYLEEELSPDEIQLFQKENXTMYEELRKTQTEVQSIENKVVKIAELQELFSEKILEQKDDIDLVSRNALAASENIKDGNEELRKAIQNKASIRNLLTYLNYNGTFKL 266
            +PR +   +FS +AR ++ +I+K+  FL +               +S ++  ERD+I+  A   +RT    I++L+ ++D    +  QVK H          +L  V K +++Q+ +R++ +   + +SRL            DG     P    N   + E+   +E++LSP+EIQ+F++EN  +  E+     EV+ IE KVV+I+ LQE+FSEK+L+Q+ +ID + +  + A+EN+K+GNE++R+AI+N A  R  + +     +F L
Sbjct:   39 RPRPRQRDSFSCKAREVISNISKLKDFLLQHRKDYVNAGSVMSSEVSRMTDSERDQIDQDAQIFMRTCAEAISQLRSEMDK-KQVSMQVKDHRAAVLDLIDSYLKGVCKLYSEQRAVRVKRVVDKKRLSRLEPEQINTEKRQSDGEENDKPVSDGNVDLWEENR--VEDDLSPEEIQMFEQENQRLVGEMNSLLDEVRQIEGKVVEISRLQEIFSEKVLQQETEIDSIHQLVVGATENVKEGNEDIREAIKNNAGFRVWILFFLVMCSFSL 306

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BLAST of EMLSAG00000000943 vs. SwissProt
Match: gi|67461733|sp|Q68FW4.1|STX18_RAT (RecName: Full=Syntaxin-18)

HSP 1 Score: 114.005 bits (284), Expect = 1.354e-28
Identity = 89/293 (30.38%), Postives = 144/293 (49.15%), Query Frame = 0

Query:   32 PRKPPHTFSVQARSILGDINKVDRFLKEE----------NMSD---LSSEERDEIENGALSLLRTTKLLITKLKKDVDNTSNIGSQVKTH----------FLGDVSKNFTKQKEIRLESMGMTREMSRLHDGSSLFSPDPHNN---------------------------ETGYAEDEEYL--------EEELSPDEIQLFQKENXTMYEELRKTQTEVQSIENKVVKIAELQELFSEKILEQKDDIDLVSRNALAASENIKDGNEELRKAIQNKASIRNLLTYLNYNGTFKL 266
            PR P   FS +AR ++  I K+  FL E            MS+   ++  ERD+I+  A   +RT K  I +L+ +     +   QVK H          +L  V K +++Q+ IR++ +   + +S+L        P+PH                             E   AE +  L        E+ELSP+EIQ+F++EN  +  E+     EV+ IE KVV+I+ LQE+F+EK+L+Q+ +ID + +  + A+ENIK+GNE++R+AI+N A  R  + +     +F L
Sbjct:   43 PR-PKGDFSSRAREVISHIGKLRDFLLEHRKEYINAYSHTMSEYGRMTDTERDQIDQDAQIFMRTCKDAIQQLRTEAHKEIH-SQQVKEHRTAVLDFVEDYLKRVCKLYSEQRAIRVKRVVDKKRLSKL-------EPEPHTKRKEPASEKSSHNASQDSEEKPAAEDLPEKPLAESQPELGTWGDGKGEDELSPEEIQMFEQENQRLIGEMNSLFDEVRQIEGKVVEISRLQEIFTEKVLQQETEIDSIHQLVVGATENIKEGNEDIREAIKNNAGFRVWILFFLVMCSFSL 326

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BLAST of EMLSAG00000000943 vs. SwissProt
Match: gi|93141319|sp|Q8VDS8.2|STX18_MOUSE (RecName: Full=Syntaxin-18)

HSP 1 Score: 114.005 bits (284), Expect = 1.517e-28
Identity = 89/293 (30.38%), Postives = 143/293 (48.81%), Query Frame = 0

Query:   32 PRKPPHTFSVQARSILGDINKVDRFLKEE----------NMSD---LSSEERDEIENGALSLLRTTKLLITKLKKDVDNTSNIGSQVKTH----------FLGDVSKNFTKQKEIRLESMGMTREMSRLHDGSSLFSPDPHNN---------------------------ETGYAEDEEYL--------EEELSPDEIQLFQKENXTMYEELRKTQTEVQSIENKVVKIAELQELFSEKILEQKDDIDLVSRNALAASENIKDGNEELRKAIQNKASIRNLLTYLNYNGTFKL 266
            PR P   FS +AR ++  I K+  FL E            MSD   ++  ERD+I+  A   +RT    I +L+ +     +   QVK H          +L  V K +++Q+ IR++ +   + +S+L        P+PH                             E   AE +  L        E+ELSP+EIQ+F++EN  +  E+     EV+ IE KVV+I+ LQE+F+EK+L+Q+ +ID + +  + A+ENIK+GNE++R+AI+N A  R  + +     +F L
Sbjct:   43 PR-PKGDFSSRAREVISHIGKLRDFLLEHRKEYINAYSHTMSDYGRMTDTERDQIDQDAQIFIRTCSEAIHQLRTEAHKEIH-SQQVKEHRTAVLDFVDDYLKRVCKLYSEQRAIRVKRVVDKKRLSKL-------EPEPHTKRKDSTSEKAPQNASQDSEGKPAAEELPEKPLAESQPELGTWGDGKGEDELSPEEIQMFEQENQRLIGEMNSLFDEVRQIEGKVVEISRLQEIFTEKVLQQETEIDSIHQLVVGATENIKEGNEDIREAIKNNAGFRVWILFFLVMCSFSL 326

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BLAST of EMLSAG00000000943 vs. SwissProt
Match: gi|17369347|sp|Q9P2W9.1|STX18_HUMAN (RecName: Full=Syntaxin-18; AltName: Full=Cell growth-inhibiting gene 9 protein)

HSP 1 Score: 108.227 bits (269), Expect = 2.231e-26
Identity = 88/287 (30.66%), Postives = 139/287 (48.43%), Query Frame = 0

Query:   32 PRKPPHTFSVQARSILGDINKVDRFLKEE----------NMSD---LSSEERDEIENGALSLLRTTKLLITKLKKDVDNTSNIGSQVKTH----------FLGDVSKNFTKQKEIRL--------------ESMGMTREMSRLHDGSSLFSPDPHNNETGYAEDEEYL---------------EEELSPDEIQLFQKENXTMYEELRKTQTEVQSIENKVVKIAELQELFSEKILEQKDDIDLVSRNALAASENIKDGNEELRKAIQNKASIRNLLTYLNYNGTFKL 266
            PR P   FS +AR ++  I K+  FL E            MS+   ++  ERD+I+  A   +RT    I +L+ +     +   QVK H          +L  V K +++Q+ IR+              E    TRE +     S   S D   N       E+ L               E+ELSP+EIQ+F++EN  +  E+     EV+ IE +VV+I+ LQE+F+EK+L+Q+ +ID + +  + A+ENIK+GNE++R+AI+N A  R  + +     +F L
Sbjct:   43 PR-PKGDFSSRAREVISHIGKLRDFLLEHRKDYINAYSHTMSEYGRMTDTERDQIDQDAQIFMRTCSEAIQQLRTEAHKEIH-SQQVKEHRTAVLDFIEDYLKRVCKLYSEQRAIRVKRVVDKKRLSKLEPEPNTKTRESTSSEKVSQSPSKDSEENPATEERPEKILAETQPELGTWGDGKGEDELSPEEIQMFEQENQRLIGEMNSLFDEVRQIEGRVVEISRLQEIFTEKVLQQEAEIDSIHQLVVGATENIKEGNEDIREAIKNNAGFRVWILFFLVMCSFSL 327

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BLAST of EMLSAG00000000943 vs. SwissProt
Match: gi|67462025|sp|Q5REB4.1|STX18_PONAB (RecName: Full=Syntaxin-18)

HSP 1 Score: 108.227 bits (269), Expect = 2.325e-26
Identity = 86/285 (30.18%), Postives = 138/285 (48.42%), Query Frame = 0

Query:   34 KPPHTFSVQARSILGDINKVDRFLKEE----------NMSD---LSSEERDEIENGALSLLRTTKLLITKLKKDVDNTSNIGSQVKTH----------FLGDVSKNFTKQKEIRL--------------ESMGMTREMSRLHDGSSLFSPDPHNNETGYAEDEEYL---------------EEELSPDEIQLFQKENXTMYEELRKTQTEVQSIENKVVKIAELQELFSEKILEQKDDIDLVSRNALAASENIKDGNEELRKAIQNKASIRNLLTYLNYNGTFKL 266
            +P   FS +AR ++  I K+  FL E            MS+   ++  ERD+I+  A   +RT    I +L+ +     +   QVK H          +L  V K +++Q+ IR+              E    TRE +     S   S D   N       E+ L               E+ELSP+EIQ+F++EN  +  E+     EV+ IE +VV+I+ LQE+F+EK+L+Q+ +ID + +  + A+ENIK+GNE++R+AI+N A  R  + +     +F L
Sbjct:   44 RPKGDFSSRAREVISHIGKLRDFLLEHRKDYINAYSHTMSEYGRMTDTERDQIDQDAQIFMRTCSEAIQQLRTEAHKEIH-SQQVKEHRTAVLDFIEDYLKRVCKLYSEQRAIRVKRVVDKKRLSKLEPEPNTKTRESTSSEKVSRSPSKDSEENPATEERPEKILAETQPELGTWGDGKGEDELSPEEIQMFEQENQRLIGEMNSLFDEVRQIEGRVVEISRLQEIFTEKVLQQEAEIDSIHQLVVGATENIKEGNEDIREAIKNNAGFRVWILFFLVMCSFSL 327

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BLAST of EMLSAG00000000943 vs. Select Arthropod Genomes
Match: gb|KFM62495.1| (Syntaxin-18, partial [Stegodyphus mimosarum])

HSP 1 Score: 60.077 bits (144), Expect = 7.763e-10
Identity = 60/237 (25.32%), Postives = 106/237 (44.73%), Query Frame = 0

Query:    1 MVDITEQFRXCLSDI-SRRPGIEPLDKDRIL-----KPRKPPHTFSVQARSILGDINKVDRFLKEE------------NMSDLSSEERDEIENGALSLLRTTKLLITKLKKDVDNTSNIGSQVKTH----------FLGDVSKNFTKQKEIRLESMGMTREMSRLHDGSSLFSPDPHNNETGYAED-----------EEYLE-----EELSPDEIQLFQKENXTMYEELRKTQTEVQ 193
            ++D+T  F+ C+  + +R   +   DKD+ +     K  K    F+V+A+ +LG I K+  FL +              +S+++  ERD+I++ A + ++    +I  L  +V  T     Q+K H          +L  V K ++ QK IR++     ++M RL        P P        E            +EYL       E SP+E+Q+F++EN  +YE++     EV+
Sbjct:    4 VMDVTPVFKACVKTLRTRNKALGLGDKDKSILSSSSKGNKHKSEFTVKAKEVLGTITKMRDFLLDHRKDYINVSHILHGVSNMTDSERDKIDSDAQAFMQMCVEVIKTLSLEVQKT--FSPQLKEHQTAVIFLIEQYLKAVCKIYSGQKAIRVKQAVDRQKMLRLESDFRKGKPLPETKLNASDETRISPTKELPVVDEYLSLDSANVEFSPEELQIFEEENQRLYEDMNTLVDEVR 238

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BLAST of EMLSAG00000000943 vs. nr
Match: gi|1129954222|ref|XP_019736679.1| (PREDICTED: syntaxin-18 [Hippocampus comes] >gi|1129954224|ref|XP_019736680.1| PREDICTED: syntaxin-18 [Hippocampus comes])

HSP 1 Score: 127.872 bits (320), Expect = 1.936e-31
Identity = 95/315 (30.16%), Postives = 163/315 (51.75%), Query Frame = 0

Query:    2 VDITEQFRXCLSDISRR---PGIEPLD--KDRILKPRKPPHTFSVQARSILGDINKVDRFLKEE-------------NMSDLSSEERDEIENGALSLLRTTKLLITKLKKDVDNTSNIGSQVKTH----------FLGDVSKNFTKQKEIRLESMGMTREMSRL----------------------HDGSSLFSPDPHNNETGYAEDEEYLEEELSPDEIQLFQKENXTMYEELRKTQTEVQSIENKVVKIAELQELFSEKILEQKDDIDLVSRNALAASENIKDGNEELRKAIQNKASIRNLLTYLNYNGTFKL 266
            VDIT  F+  +  +  R    GI   D  KD I K  +P + FS +A+ ++ +I K+  FL +              +++ ++  ERD+I+  A   +RT    I +L+ D D  +   +Q K H          +L  V K +++Q+ IR++ M   + +SRL                       + SS  S    ++++    +E  +E+ELSP+EIQ+F++EN  +  E+     EV+ IE KVV+I+ LQE+FSEK+L+Q+ +ID + +  + A+EN+K+GNE++R+AI+N A  R  + +     +F L
Sbjct:    3 VDITLLFKASVKTVKTRNKAIGI-GFDSAKDEIFKRSRPKNGFSPKAKEVIINITKLKDFLLQHRKDYVSAGSLISSDLTRMTDSERDQIDQDAQIFMRTCSDAIKQLRIDADKPAT-SAQTKEHRGAVLDLIEMYLKGVCKLYSEQRAIRVKRMVDKKRLSRLGSEQHGRVEKIVDEESKEEVTAKEQSSDKSATEASDQSVNLWEEGKVEDELSPEEIQMFEQENQRLVSEMSNLVDEVRQIEGKVVEISRLQEIFSEKVLQQETEIDNIHQLVVGATENVKEGNEDIREAIKNNAGFRVWILFFLVMCSFSL 315

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BLAST of EMLSAG00000000943 vs. nr
Match: gi|498960381|ref|XP_004545247.1| (PREDICTED: syntaxin-18 [Maylandia zebra])

HSP 1 Score: 127.102 bits (318), Expect = 3.595e-31
Identity = 96/317 (30.28%), Postives = 163/317 (51.42%), Query Frame = 0

Query:    2 VDITEQFRXCLSDISRR---PGIEPLD--KDRILKPRKPPHTFSVQARSILGDINKVDRFLKEE-------------NMSDLSSEERDEIENGALSLLRTTKLLITKLKKDVDNTSNIGSQVKTH----------FLGDVSKNFTKQKEIRLESMGMTREMSRL----------------------HDGSS--LFSPDPHNNETGYAEDEEYLEEELSPDEIQLFQKENXTMYEELRKTQTEVQSIENKVVKIAELQELFSEKILEQKDDIDLVSRNALAASENIKDGNEELRKAIQNKASIRNLLTYLNYNGTFKL 266
            VDIT  F+  +  +  R    GI   D  KD I K  +P   FS +A+ ++ +I K+  FL +              ++S ++  +RD+I+  A   +RT    I +L+ + +    I +Q+K H          +L  V K +++Q+ IR++ M   + +SRL                       +GSS    S +  +N     E E  +E+ELSP+EIQ+F++EN  +  E+     EV+ IE KVV+I+ LQE+F+EK+L+Q+ +ID + +  + A+EN+K+GNE++R+AI+N A  R  + +     +F L
Sbjct:    3 VDITLLFKASVKTVKTRNKAIGI-GFDSTKDEIFKRSRPKSGFSPRAKEVITNITKLKDFLLQHRKDYVSAGSLISSDLSRMTDNDRDQIDQDAQIFMRTCSEAIKQLRNEAEKQV-ISAQIKEHRGAVLDLIETYLKGVCKLYSEQRAIRVKRMVDKKRLSRLVPEHHGPVEKKVEVEPTEEDTVKEGSSEKTASSEVQDNPVNLWE-ESRVEDELSPEEIQMFEQENQRLISEMNSLVDEVRQIEGKVVEISRLQEIFAEKVLQQEAEIDNIHQLVVGATENVKEGNEDIREAIKNNAGFRVWILFFLVMCSFSL 316

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BLAST of EMLSAG00000000943 vs. nr
Match: gi|1079728215|ref|XP_018533137.1| (PREDICTED: syntaxin-18 [Lates calcarifer])

HSP 1 Score: 126.716 bits (317), Expect = 5.755e-31
Identity = 91/318 (28.62%), Postives = 160/318 (50.31%), Query Frame = 0

Query:    2 VDITEQFRXCLSDISRR---PGIEPLD--KDRILKPRKPPHTFSVQARSILGDINKVDRFLKEE-------------NMSDLSSEERDEIENGALSLLRTTKLLITKLKKDVDNTSNIGSQVKTH----------FLGDVSKNFTKQKEIRLESMGMTREMSRLHDGSSLFS-------------------------PDPHNNETGYAEDEEYLEEELSPDEIQLFQKENXTMYEELRKTQTEVQSIENKVVKIAELQELFSEKILEQKDDIDLVSRNALAASENIKDGNEELRKAIQNKASIRNLLTYLNYNGTFKL 266
            VDIT  F+  +  +  R    GI   D  KD I K  +P   FS +A+ ++ +I K+  FL +              +++ ++  ERD+I+  A   +RT    I +L+ + +      +Q+K H          +L  V K +++Q+ IR++ M   + +SRL      F+                          +  +N   +  +E  +E+ELSP+EIQ+F++EN  +  E+     EV+ IE KVV+I+ LQE+F+EK+L+Q+ +ID + +  + A+EN+K+GNE++R+AI+N A  R  + +     +F L
Sbjct:    3 VDITLLFKASVKTVKTRNKAIGI-GFDSTKDEIFKRSRPKSGFSPKAKEVITNITKLKDFLLQHRKDYVSAGSLISSDLTRMTDSERDQIDQDAQIFMRTCSEAIKQLRNEAEKKVT-SAQIKEHRGAVLDLIEMYLKGVCKLYSEQRAIRVKRMVDKKRLSRLAPEQEYFTRVEKTQEVEPTEEKAVKEESSEKNVSEVLDNTVEHLWEEGRMEDELSPEEIQMFEQENQRLVSEMNSLVDEVRQIEGKVVEISRLQEIFAEKVLQQETEIDSIHQLVVGATENVKEGNEDIREAIKNNAGFRVWILFFLVMCSFSL 318

[Close]

BLAST of EMLSAG00000000943 vs. nr
Match: gi|632959252|ref|XP_007895510.1| (PREDICTED: syntaxin-18 isoform X2 [Callorhinchus milii])

HSP 1 Score: 126.331 bits (316), Expect = 6.507e-31
Identity = 95/322 (29.50%), Postives = 163/322 (50.62%), Query Frame = 0

Query:    2 VDITEQFRXCLSDISRR---PGIEPLDKDRILKPRKPPHTFSVQARSILGDINKVDRFLKEEN-------------MSDLSSEERDEIENGALSLLRTTKLLITKLKKD-VDNTSNIGSQVKTH----------FLGDVSKNFTKQKEIRLESMGMTREMSRL----HDGSSLFSP------------------DPHNNET--------GYAEDEEYLEEELSPDEIQLFQKENXTMYEELRKTQTEVQSIENKVVKIAELQELFSEKILEQKDDIDLVSRNALAASENIKDGNEELRKAIQNKASIRNLLTYLNYNGTFKL 266
             DIT  FR  +  +  R    G+    ++ IL+  +P   FS +A+ ++ +I+K+  FL E                S ++  ERD+I+  A   LRT    I +L+ + + N   I  QVK H          +L  V K +++Q+ IR++ +   + +SR+    H    L S                   D +N+++        G  ED ++ E+ELSP+EIQ+F++EN  +  ++     EV+ IE KVV+I+ LQE+F+EK+L+Q+ DID + +  +  +EN+K+GNE++R+AI+N A  R  + +     +F L
Sbjct:    3 ADITPLFRASVKTVKTRNKAMGVSAEPREEILRRGRPKGGFSSRAKEVVANISKLKDFLLEHRKDYINASSCFMSEYSRMTDTERDQIDQDAQIFLRTCSDAIQQLRTEAIKNV--ISPQVKEHREGVLYLLEAYLKSVCKVYSEQRAIRVKRLVDKKRLSRIAPEQHSKKPLVSSSELNLPSKTENSEEQVIKDENNDKSIPEVQDNLGLWEDGKW-EDELSPEEIQMFEQENQRLLTDMNSLVDEVRQIEGKVVEISRLQEIFTEKVLQQEKDIDNIHQLVVGTTENVKEGNEDIREAIKNNAGFRVWILFFLVMCSFSL 321

[Close]

BLAST of EMLSAG00000000943 vs. nr
Match: gi|66773090|ref|NP_001019596.1| (syntaxin-18 [Danio rerio] >gi|82226253|sp|Q4VBI7.1|STX18_DANRE RecName: Full=Syntaxin-18 >gi|66267410|gb|AAH95763.1| Zgc:112326 [Danio rerio])

HSP 1 Score: 125.946 bits (315), Expect = 6.857e-31
Identity = 83/271 (30.63%), Postives = 148/271 (54.61%), Query Frame = 0

Query:   31 KPR-KPPHTFSVQARSILGDINKVDRFLKEEN-------------MSDLSSEERDEIENGALSLLRTTKLLITKLKKDVDNTSNIGSQVKTH----------FLGDVSKNFTKQKEIRLESMGMTREMSRLH-----------DGSSLFSPDPHNNETGYAEDEEYLEEELSPDEIQLFQKENXTMYEELRKTQTEVQSIENKVVKIAELQELFSEKILEQKDDIDLVSRNALAASENIKDGNEELRKAIQNKASIRNLLTYLNYNGTFKL 266
            +PR +   +FS +AR ++ +I+K+  FL +               +S ++  ERD+I+  A   +RT    I++L+ ++D    +  QVK H          +L  V K +++Q+ +R++ +   + +SRL            DG     P    N   + E+   +E++LSP+EIQ+F++EN  +  E+     EV+ IE KVV+I+ LQE+FSEK+L+Q+ +ID + +  + A+EN+K+GNE++R+AI+N A  R  + +     +F L
Sbjct:   39 RPRPRQRDSFSCKAREVISNISKLKDFLLQHRKDYVNAGSVMSSEVSRMTDSERDQIDQDAQIFMRTCAEAISQLRSEMDK-KQVSMQVKDHRAAVLDLIDSYLKGVCKLYSEQRAVRVKRVVDKKRLSRLEPEQINTEKRQSDGEENDKPVSDGNVDLWEENR--VEDDLSPEEIQMFEQENQRLVGEMNSLLDEVRQIEGKVVEISRLQEIFSEKVLQQETEIDSIHQLVVGATENVKEGNEDIREAIKNNAGFRVWILFFLVMCSFSL 306

[Close]

BLAST of EMLSAG00000000943 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold156_size297567-snap-gene-0.20 (protein:Tk07662 transcript:maker-scaffold156_size297567-snap-gene-0.20-mRNA-1 annotation:"syntaxin-18 isoform x1")

HSP 1 Score: 137.117 bits (344), Expect = 1.459e-38
Identity = 97/323 (30.03%), Postives = 160/323 (49.54%), Query Frame = 0

Query:   12 LSDISRRPGIEPLDKDRILKPRKPPHTFSVQARSILGDINKVDRFLKEE-------------NMSDLSSEERDEIENGALSLLRTTKLLITKLKKDVDNTSNIGSQVKTH----------FLGDVSKNFTKQKEIRLESMGMTREMSRLH--------------------------------------DGSSLFSPD-------PHNNETGYAEDEEYLEEELSPDEIQLFQKENXTMYEELRKTQTEVQSIENKVVKIAELQELFSEKILEQKDDIDLVSRNALAASENIKDGNEELRKAIQNKASIRNLLTYLNYNGTFKL 266
            L  +S R G+EPL+                 AR I+ +  ++  FL +                  L+ +++D I+ GA   +RT + LITK ++D+D +S +  + ++H          +L  V + + +Q+ IR++     ++++RL                                       + +S  SP        P    + Y E+EE + E L+PDEIQ+F++EN  +Y++  + +  V  I+NKVVKIAELQ++F+EK+L+QK DIDLV  +A++ +EN+KD NEELRKAIQN+ASIR  + +     +F L
Sbjct:   41 LRRVSLRGGLEPLES---------------LARDIVANTTRLKEFLLDHRSDYVDVVRAAWSGQCGLTHQQKDHIDAGANRFIRTCQGLITKFQRDLDQSSALSGERRSHLAAVGQILAGYLKAVCRIYAQQQAIRVQRELEFQKLARLEIKARKSSESQPRDSRRLESDLLSRLGHSSSSSMDSSDEEATSESSPKRRKSEDIPLTASSNYPEEEEEVSE-LTPDEIQMFEQENAQLYQDFMQVKDSVHQIQNKVVKIAELQDVFTEKVLQQKGDIDLVHHHAVSTTENVKDANEELRKAIQNQASIRVYILFFLLMMSFSL 347

The following BLAST results are available for this feature:

BLAST of EMLSAG00000000943 vs. GO
BLAST of EMLSAG00000000943 vs. C. finmarchicus
BLAST of EMLSAG00000000943 vs. L. salmonis peptides
BLAST of EMLSAG00000000943 vs. SwissProt
BLAST of EMLSAG00000000943 vs. Select Arthropod Genomes
BLAST of EMLSAG00000000943 vs. nr
BLAST of EMLSAG00000000943 vs. Tigriopus kingsejongenis genes

BLAST of EMLSAG00000000943 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO)
Total hits: 18


Match Name	E-value	Identity	Description
-	6.141e-17	29.11	symbol:LOC100621709 "Uncharacterized protein" spec...	[more]
-	8.273e-15	41.38	symbol:Syx18 "Syntaxin 18" species:7227 "Drosophil...	[more]
-	1.365e-9	43.28	symbol:syx-18 species:6239 "Caenorhabditis elegans...	[more]
-	2.142e-6	28.57	symbol:AO090011000678 "Predicted protein" species:...	[more]
-	2.142e-6	28.57	symbol:ufe1 species:5062 "Aspergillus oryzae" [GO:...	[more]
-	4.419e-6	25.35	symbol:AFUA_2G09670 "SNARE protein (Ufe1), putativ...	[more]
-	4.419e-6	25.35	symbol:Afu2g09670 species:746128 "Aspergillus fumi...	[more]
-	4.895e-4	32.14	symbol:SYP81 "syntaxin of plants 81" species:3702 ...	[more]

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BLAST of EMLSAG00000000943 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA)
Total hits: 1


Match Name	E-value	Identity	Description
gi\|592830381\|gb\|GAXK01127163.1\|	4.386e-18	44.68	TSA: Calanus finmarchicus comp47952_c0_seq1 transc...	[more]

BLAST of EMLSAG00000000943 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self)
Total hits: 1


Match Name	E-value	Identity	Description
EMLSAP00000000943	0.000e+0	100.00	pep:novel supercontig:LSalAtl2s:LSalAtl2s1166:1629...	[more]

BLAST of EMLSAG00000000943 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|82226253\|sp\|Q4VBI7.1\|STX18_DANRE	2.891e-33	30.63	RecName: Full=Syntaxin-18	[more]
gi\|67461733\|sp\|Q68FW4.1\|STX18_RAT	1.354e-28	30.38	RecName: Full=Syntaxin-18	[more]
gi\|93141319\|sp\|Q8VDS8.2\|STX18_MOUSE	1.517e-28	30.38	RecName: Full=Syntaxin-18	[more]
gi\|17369347\|sp\|Q9P2W9.1\|STX18_HUMAN	2.231e-26	30.66	RecName: Full=Syntaxin-18; AltName: Full=Cell grow...	[more]
gi\|67462025\|sp\|Q5REB4.1\|STX18_PONAB	2.325e-26	30.18	RecName: Full=Syntaxin-18	[more]

BLAST of EMLSAG00000000943 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods)
Total hits: 11


Match Name	E-value	Identity	Description
gb\|KFM62495.1\|	7.763e-10	25.32	Syntaxin-18, partial [Stegodyphus mimosarum]	[more]

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BLAST of EMLSAG00000000943 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017))
Total hits: 25


Match Name	E-value	Identity	Description
gi\|1129954222\|ref\|XP_019736679.1\|	1.936e-31	30.16	PREDICTED: syntaxin-18 [Hippocampus comes] >gi\|112...	[more]
gi\|498960381\|ref\|XP_004545247.1\|	3.595e-31	30.28	PREDICTED: syntaxin-18 [Maylandia zebra]	[more]
gi\|1079728215\|ref\|XP_018533137.1\|	5.755e-31	28.62	PREDICTED: syntaxin-18 [Lates calcarifer]	[more]
gi\|632959252\|ref\|XP_007895510.1\|	6.507e-31	29.50	PREDICTED: syntaxin-18 isoform X2 [Callorhinchus m...	[more]
gi\|66773090\|ref\|NP_001019596.1\|	6.857e-31	30.63	syntaxin-18 [Danio rerio] >gi\|82226253\|sp\|Q4VBI7.1...	[more]

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BLAST of EMLSAG00000000943 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins)
Total hits: 1


Match Name	E-value	Identity	Description
maker-scaffold156_size297567-snap-gene-0.20	1.459e-38	30.03	protein:Tk07662 transcript:maker-scaffold156_size2...	[more]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
LSalAtl2s1166	supercontig	LSalAtl2s1166:162994..164031 +

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
ensembl	2013-09-26 .965016
Blast vs. GO	2014-04-02
TblastN vs C. finmarchicus TSA	2014-05-09
Blastp vs. self	2014-05-10
Blastp vs. SwissProt	2017-02-10
Blastp vs. Selected Arthropods	2017-02-20
Blastp vs. NR (2/2017)	2017-02-20
Blastp vs. Tigriopus kingsejongensis proteins	2018-04-18

Properties


Property Name	Value
Logic name	ensemblgenomes
Description	snap_masked-LSalAtl2s1166-processed-gene-1.14
Biotype	protein_coding
Evidence	IEA
Note	Syntaxin-18 [Lepeophtheirus salmonis]

Cross References

External references for this gene


Database	Accession
Ensembl Metazoa (gene)	EMLSAG00000000943 (primary cross-reference)

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
EMLSAT00000000943	EMLSAT00000000943-696790	Lepeophtheirus salmonis	mRNA

Sequences

The following sequences are available for this feature:

gene from alignment at LSalAtl2s1166:162994..164031+

gene from alignment at LSalAtl2s1166:162994..164031+

Legend: mRNA

Hold the cursor over a type above to highlight its positions in the sequence below.

>EMLSAG00000000943-683709 ID=EMLSAG00000000943-683709|Name=EMLSAG00000000943|organism=Lepeophtheirus salmonis|type=gene|length=1038bp|location=Sequence derived from alignment at LSalAtl2s1166:162994..164031+ (Lepeophtheirus salmonis)
ATGGTGGATATTACTGAGCAATTCCGARCCTGCCTATCGGATATTAGTCG
TAGGCCAGGAATTGAACCTCTAGATAAAGATAGAATATTAAAACCCAGAA
AGCCTCCTCATACTTTTTCTGTCCAAGCACGGAGTATTCTTGGAGATATC
AACAAAGTAGATCGGTTTTTGAAGGAAGAAAATATGAGCGATCTGTCCAG
TGAGGAACGTGATGAGATCGAAAATGGAGCACTATCGCTCCTCCGTACTA
CAAAATTACTCATCACTAAGCTTAAAAAAGATGTAGATAATACTTCAAAT
ATAGGGTCTCAAGTGAAGACACATTTCCTGGGAGTGGGTGAAGTCTTGGA
TAAGAAACTTAAGGCATTTAATAAATGTATATAATTGATAGTTTAGATTT
CTAATGGTTTTTTTTTTTGTTTTTCAATTTTCAAATAGGACGTCTCTAAG
AATTTTACAAAGCAAAAGGAAATCAGATTAGAAAGCATGGGAATGACCAG
AGAAATGAGCCGTTTGCATGACGGTTCAAGCTTATTTAGTCCAGATCCTC
ATAATAATGAAACCGGATATGCAGAGGATGAAGAGTACCTTGAGGAAGAG
TTATCTCCAGATGAGATTCAACTTTTTCAAAAGGAAAATYCCACAATGTA
TGAGGAACTACGGAAAACACAGACTGAAGTTCAGTCCATTGAAAACAAGG
TGGTAAAAATTGCAGAGCTCCAAGAACTCTTTTCGGAAAAAATCCTTGAA
CAAAAGGATGATATTGATCTCGTGTCTCGGAATGCTCTTGCTGCATCTGA
AAACATTAAGGATGGAAATGAAGAACTAAGAAAGGCAATACAGAATAAGG
CGTCCATTCGTGTATARATACTTTTCTCCTTATTAGTTCTTTCCTTTTCT
CTTTTATTCCTTGATTGGTATAATCCATAAGCTCAATTGATGATATGGCG
TATAAAATATAGCTCTTCACCATTCAATAATTAATTATTTCAGAACTTAT
TAACTTATTTAAATTATAATGGCACATTCAAATTATGA

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