EMLSAG00000001044, EMLSAG00000001044-683810 (gene) Lepeophtheirus salmonis

Overview
NameEMLSAG00000001044
Unique NameEMLSAG00000001044-683810
Typegene
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Homology
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BLAST of EMLSAG00000001044 vs. GO
Match: - (symbol:ccdc103 "coiled-coil domain containing 103" species:7955 "Danio rerio" [GO:0003674 "molecular_function" evidence=ND] [GO:0007368 "determination of left/right symmetry" evidence=IMP] [GO:0003143 "embryonic heart tube morphogenesis" evidence=IMP] [GO:0001947 "heart looping" evidence=IMP] [GO:0003146 "heart jogging" evidence=IMP] [GO:0070286 "axonemal dynein complex assembly" evidence=IMP] [GO:0003341 "cilium movement" evidence=IMP] [GO:0005930 "axoneme" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0030030 "cell projection organization" evidence=IEA] [GO:0005929 "cilium" evidence=IEA] [GO:0042995 "cell projection" evidence=IEA] ZFIN:ZDB-GENE-040718-253 GO:GO:0005930 GO:GO:0001947 GO:GO:0030030 EMBL:BC076434 RefSeq:NP_001002753.1 UniGene:Dr.114404 DNASU:437026 Ensembl:ENSDART00000075493 GeneID:437026 KEGG:dre:437026 CTD:388389 eggNOG:NOG43148 GeneTree:ENSGT00390000004038 HOGENOM:HOG000231454 HOVERGEN:HBG080287 InParanoid:Q6DGB6 OMA:EQRVASY OrthoDB:EOG7D59RG TreeFam:TF324467 NextBio:20831441 PRO:PR:Q6DGB6 Bgee:Q6DGB6 GO:GO:0070286 GO:GO:0003341 GO:GO:0003146 InterPro:IPR025986 Pfam:PF13877 Uniprot:Q6DGB6)

HSP 1 Score: 46.2098 bits (108), Expect = 1.056e-4
Identity = 28/71 (39.44%), Postives = 38/71 (53.52%), Query Frame = 0 
Query:    4 LDFEELHKDLLKLIDEDSLYWIRNEAKFRATRQG-CTFEEFDAIVKTSHLNPVTSHDIKELKKNQGVNWNP 73
            ++F  L K+L   +  D  Y   N+AKFRA  Q   ++EEF  IV  SHL P+  +DI    + Q   WNP
Sbjct:    7 INFSCLEKELHSALQADRKYQRENDAKFRALNQKVASYEEFRDIVLASHLKPLDRNDISGSPRKQ--PWNP 75
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BLAST of EMLSAG00000001044 vs. GO
Match: - (symbol:CCDC103 "Uncharacterized protein" species:9823 "Sus scrofa" [GO:0001947 "heart looping" evidence=IEA] [GO:0003341 "cilium movement" evidence=IEA] [GO:0036158 "outer dynein arm assembly" evidence=IEA] [GO:0036159 "inner dynein arm assembly" evidence=IEA] [GO:0042803 "protein homodimerization activity" evidence=IEA] [GO:0071907 "determination of digestive tract left/right asymmetry" evidence=IEA] GO:GO:0001947 GO:GO:0071907 GeneTree:ENSGT00390000004038 OMA:EQRVASY OrthoDB:EOG7D59RG TreeFam:TF324467 GO:GO:0003341 InterPro:IPR025986 Pfam:PF13877 GO:GO:0036159 GO:GO:0036158 EMBL:CU896578 RefSeq:XP_005668791.1 RefSeq:XP_005668792.1 RefSeq:XP_005668793.1 UniGene:Ssc.53453 Ensembl:ENSSSCT00000018881 GeneID:100521923 Uniprot:F1RR00)

HSP 1 Score: 45.0542 bits (105), Expect = 1.980e-4
Identity = 28/76 (36.84%), Postives = 38/76 (50.00%), Query Frame = 0 
Query:    4 LDFEELHKDLLKLIDEDSLYWIRNEAKFRATRQG-CTFEEFDAIVKTSHLNPVTSHDIKELKKNQGVNWNPKINQG 78
            +DF+ L K+L   +  D  Y   N AK RA  Q   ++EEF  IV  SHL P+   D  ++   + V WN    QG
Sbjct:    7 IDFKALEKELQAALTADEKYKRENAAKLRAVEQRVASYEEFRGIVLASHLKPLERKD--KIGGKRTVPWNCHAVQG 80
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BLAST of EMLSAG00000001044 vs. GO
Match: - (symbol:CCDC103 "Uncharacterized protein" species:9615 "Canis lupus familiaris" [GO:0001947 "heart looping" evidence=IEA] [GO:0003341 "cilium movement" evidence=IEA] [GO:0036158 "outer dynein arm assembly" evidence=IEA] [GO:0036159 "inner dynein arm assembly" evidence=IEA] [GO:0042803 "protein homodimerization activity" evidence=IEA] [GO:0071907 "determination of digestive tract left/right asymmetry" evidence=IEA] GO:GO:0001947 GO:GO:0071907 GeneTree:ENSGT00390000004038 OMA:EQRVASY OrthoDB:EOG7D59RG TreeFam:TF324467 GO:GO:0003341 InterPro:IPR025986 Pfam:PF13877 GO:GO:0036159 GO:GO:0036158 EMBL:AAEX03006409 RefSeq:XP_005624435.1 RefSeq:XP_005624436.1 RefSeq:XP_005624437.1 RefSeq:XP_005624438.1 RefSeq:XP_548057.1 Ensembl:ENSCAFT00000022186 GeneID:490934 KEGG:cfa:490934 NextBio:20863858 Uniprot:E2RR24)

HSP 1 Score: 45.0542 bits (105), Expect = 2.433e-4
Identity = 28/77 (36.36%), Postives = 38/77 (49.35%), Query Frame = 0 
Query:    4 LDFEELHKDLLKLIDEDSLYWIRNEAKFRATRQG-CTFEEFDAIVKTSHLNPVTSHDIKELKKNQGVNWNPKINQGG 79
            +DF+ L K+L   +  D  Y   N AK RA  Q   ++EEF  IV  SHL P+   D  ++   + V WN    Q G
Sbjct:    7 IDFKALEKELQAALTADEKYKRENAAKLRAVEQKVASYEEFRGIVLASHLKPLERKD--KIGGKRTVPWNCHTTQRG 81
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BLAST of EMLSAG00000001044 vs. GO
Match: - (symbol:CCDC103 "Uncharacterized protein" species:9031 "Gallus gallus" [GO:0001947 "heart looping" evidence=IEA] [GO:0003341 "cilium movement" evidence=IEA] [GO:0036158 "outer dynein arm assembly" evidence=IEA] [GO:0036159 "inner dynein arm assembly" evidence=IEA] [GO:0042803 "protein homodimerization activity" evidence=IEA] [GO:0071907 "determination of digestive tract left/right asymmetry" evidence=IEA] CTD:388389 GeneTree:ENSGT00390000004038 OrthoDB:EOG7D59RG TreeFam:TF324467 InterPro:IPR025986 Pfam:PF13877 EMBL:AADN03008611 RefSeq:XP_004948540.1 RefSeq:XP_418092.1 UniGene:Gga.19589 Ensembl:ENSGALT00000001352 GeneID:419970 KEGG:gga:419970 Uniprot:F1NE62)

HSP 1 Score: 43.8986 bits (102), Expect = 5.287e-4
Identity = 44/209 (21.05%), Postives = 83/209 (39.71%), Query Frame = 0 
Query:    4 LDFEELHKDLLKLIDEDSLYWIRNEAKFRATRQGC-TFEEFDAIVKTSHLNPVTSHDIKELKKNQGVNWNPKINQGGQPPASSSKQFQENNLEGKRPSTISTSIEYTSVPDLKSLNPFRLERAFKNECYSSELLVKIFIDILDNHATKHGCNSLSNSSIENLKTFIPKEDLKFIWNVIKAVHHSNRLDINIGFLSKKQIRTILNITRNV 211
            +D+  L ++L   ++ D  +   N AK RA RQ   ++ EF  IV  SHL P+   D    K+N  V WNP +                 +  G++ + +    E   +P   +       R  K+     +LL+K+    L           L    +  L   +  ED   +  +++++  + R  +N+  LS  +  +  ++ R +
Sbjct:    7 VDWRALREELRAALEADGRHERENSAKLRAVRQRVGSYREFRDIVLASHLRPLEKKDKMGNKRN--VLWNPCV----------------GHTSGQKATEVEIPQELEQLPGTSAEFYRDWRRCLKSGKEKYQLLLKLEGKALSRIFQTELGFGLLGEFLTVLAENVCHEDRDAVLQILQSLSSTKRFGLNLDLLSTSEKESTRDLFRKL 197
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BLAST of EMLSAG00000001044 vs. C. finmarchicus
Match: gi|592837388|gb|GAXK01120156.1| (TSA: Calanus finmarchicus comp352036_c0_seq7 transcribed RNA sequence)

HSP 1 Score: 33.4982 bits (75), Expect = 3.376e-1
Identity = 25/72 (34.72%), Postives = 34/72 (47.22%), Query Frame = 0 
Query:   30 KFRATR----QGCTFEEFDAIVKTSHLNPVTSHDIKELKKNQGVNWNPKINQGGQPPASSSKQFQENNLEGK 97
            KFR TR    Q  TF      V  + +N  T H+  +  K Q    +  IN  GQ  +SS KQ++  N+ GK
Sbjct:  322 KFRNTRDYWNQNQTFLSAQPTVDHTFMNKHTKHNTYDFTKYQPNAESNVINNNGQKTSSSPKQYERLNVYGK 537
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BLAST of EMLSAG00000001044 vs. C. finmarchicus
Match: gi|592833005|gb|GAXK01124539.1| (TSA: Calanus finmarchicus comp24864_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 31.9574 bits (71), Expect = 1.441e+0
Identity = 17/42 (40.48%), Postives = 23/42 (54.76%), Query Frame = 0 
Query:    3 KLDFEELHKDLLKLIDEDSLYWIRNEAKFRATRQGCTFEEFD 44
            KLD +E  + + K  D    YW RN+ +  + R GCTF  FD
Sbjct:  202 KLDIQE-GEVMFKWWDP-VYYWYRNDIEAVSVRAGCTFTGFD 321
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BLAST of EMLSAG00000001044 vs. C. finmarchicus
Match: gi|592833004|gb|GAXK01124540.1| (TSA: Calanus finmarchicus comp24864_c0_seq2 transcribed RNA sequence)

HSP 1 Score: 31.5722 bits (70), Expect = 1.564e+0
Identity = 17/42 (40.48%), Postives = 23/42 (54.76%), Query Frame = 0 
Query:    3 KLDFEELHKDLLKLIDEDSLYWIRNEAKFRATRQGCTFEEFD 44
            KLD +E  + + K  D    YW RN+ +  + R GCTF  FD
Sbjct:  202 KLDIQE-GEVMFKWWDP-VYYWYRNDIEAVSVRAGCTFTGFD 321
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BLAST of EMLSAG00000001044 vs. C. finmarchicus
Match: gi|592866972|gb|GAXK01090590.1| (TSA: Calanus finmarchicus comp2073599_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 30.8018 bits (68), Expect = 1.987e+0
Identity = 17/46 (36.96%), Postives = 24/46 (52.17%), Query Frame = 0 
Query:   77 QGGQPPASSSKQFQENNLEGKRPSTISTSIEYTSVPDLKSLNPFRL 122
            Q  QP  +  K+ Q  NLE +RPS     I    +PD  +L PF++
Sbjct:  135 QQSQPKPAKLKEAQNGNLETRRPSGSLAEI----IPDWPTLKPFKV 260
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BLAST of EMLSAG00000001044 vs. C. finmarchicus
Match: gi|592887716|gb|GAXK01070659.1| (TSA: Calanus finmarchicus comp214159_c1_seq5 transcribed RNA sequence)

HSP 1 Score: 30.0314 bits (66), Expect = 7.470e+0
Identity = 19/62 (30.65%), Postives = 29/62 (46.77%), Query Frame = 0 
Query:   37 GCTFEEFDAIVKTSHLNPVTSHDIKELKKNQGVNW--NPKINQGGQPPASSSKQFQENNLEG 96
             C+F  F  I   S L+    H ++   + QG +W  NP++     PP+SS   FQ   L+ 
Sbjct:  195 SCSFCSFHNIFSHSSLH--IHHQVQNKVQQQGKSWKRNPEVPNSKAPPSSSQIIFQSRCLQS 374
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BLAST of EMLSAG00000001044 vs. C. finmarchicus
Match: gi|592941262|gb|GAXK01017291.1| (TSA: Calanus finmarchicus comp73096_c2_seq1 transcribed RNA sequence)

HSP 1 Score: 26.9498 bits (58), Expect = 9.630e+0
Identity = 13/36 (36.11%), Postives = 18/36 (50.00%), Query Frame = 0 
Query:  119 PFRLERAFKNECYSSELLVKIFIDILDNHATKHGCN 154
            P RLE   ++      L+  IFI +  +HA  HG N
Sbjct: 1930 PLRLEHLHQSLPVVLNLIPDIFIHLCPSHAVAHGHN 2037

HSP 2 Score: 20.7866 bits (42), Expect = 9.630e+0
Identity = 4/18 (22.22%), Postives = 12/18 (66.67%), Query Frame = 0 
Query:  168 IPKEDLKFIWNVIKAVHH 185
            +P + ++  W+++  +HH
Sbjct: 1821 LPMDTIRCFWDLLDPIHH 1874
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BLAST of EMLSAG00000001044 vs. L. salmonis peptides
Match: EMLSAP00000001044 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1172:29135:29917:-1 gene:EMLSAG00000001044 transcript:EMLSAT00000001044 description:"augustus_masked-LSalAtl2s1172-processed-gene-0.3")

HSP 1 Score: 488.034 bits (1255), Expect = 2.146e-176
Identity = 239/239 (100.00%), Postives = 239/239 (100.00%), Query Frame = 0 
Query:    1 MSKLDFEELHKDLLKLIDEDSLYWIRNEAKFRATRQGCTFEEFDAIVKTSHLNPVTSHDIKELKKNQGVNWNPKINQGGQPPASSSKQFQENNLEGKRPSTISTSIEYTSVPDLKSLNPFRLERAFKNECYSSELLVKIFIDILDNHATKHGCNSLSNSSIENLKTFIPKEDLKFIWNVIKAVHHSNRLDINIGFLSKKQIRTILNITRNVIHSIELKEEEEEQIKVLERNETFYRTLI 239
            MSKLDFEELHKDLLKLIDEDSLYWIRNEAKFRATRQGCTFEEFDAIVKTSHLNPVTSHDIKELKKNQGVNWNPKINQGGQPPASSSKQFQENNLEGKRPSTISTSIEYTSVPDLKSLNPFRLERAFKNECYSSELLVKIFIDILDNHATKHGCNSLSNSSIENLKTFIPKEDLKFIWNVIKAVHHSNRLDINIGFLSKKQIRTILNITRNVIHSIELKEEEEEQIKVLERNETFYRTLI
Sbjct:    1 MSKLDFEELHKDLLKLIDEDSLYWIRNEAKFRATRQGCTFEEFDAIVKTSHLNPVTSHDIKELKKNQGVNWNPKINQGGQPPASSSKQFQENNLEGKRPSTISTSIEYTSVPDLKSLNPFRLERAFKNECYSSELLVKIFIDILDNHATKHGCNSLSNSSIENLKTFIPKEDLKFIWNVIKAVHHSNRLDINIGFLSKKQIRTILNITRNVIHSIELKEEEEEQIKVLERNETFYRTLI 239
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BLAST of EMLSAG00000001044 vs. Select Arthropod Genomes
Match: EFX82618.1 (hypothetical protein DAPPUDRAFT_34230, partial [Daphnia pulex])

HSP 1 Score: 63.5438 bits (153), Expect = 2.459e-11
Identity = 55/224 (24.55%), Postives = 99/224 (44.20%), Query Frame = 0 
Query:    4 LDFEELHKDLLKLIDEDSLYWIRNEAKFRATRQGCTFEEFDAIVKTSHLNPVTSHDIKELKKNQGVNWNPKINQGGQPPASSSKQFQENNLEGKRPSTISTSIEYTSVPDLKSLNPFRLERAFKNECYSSE------LLVKIFIDILDNHATKHGCNSLSNSSIENLKTFIPKEDLKFIWNVIKAVHHSNRLDINIGFLSKKQIRTILNITRNVIHSIELKEEE 221
            + F ++ KDL+  ++ D+   + NEAK RA  Q  +++EF  IV+  HL PV S  +   K  +G  WN          A S K ++    E ++ +  + +  Y       SLN   +   F N    S+      +L KI    L+N  T     +L     E L  F P  D+  +  +++A+    R ++ + FL+  +  T   +   ++ S+  +E++
Sbjct:    1 VSFAQMEKDLISALESDAHNQLENEAKLRAISQRVSYDEFRDIVRGVHLKPVPSGSLSVNKPQKGRIWNNI--------ALSKKSYETEACEARKGTAATPANNY-------SLNQLPISAQFLNSWQQSDTKSRLLILYKIGPAGLNNIFTIDMPTALLGEIFEALLCFNPVTDVVAVIKLMEALTKIKRFNLIVHFLNASERATCQQLIHKLLASLVQREQD 209
[Close]
BLAST of EMLSAG00000001044 vs. Select Arthropod Genomes
Match: gb|EFA05848.2| (hypothetical protein TcasGA2_TC008639 [Tribolium castaneum])

HSP 1 Score: 56.225 bits (134), Expect = 6.152e-10
Identity = 23/53 (43.40%), Postives = 36/53 (67.92%), Query Frame = 0 
Query:    7 EELHKDLLKLIDEDSLYWIRNEAKFRATRQGCTFEEFDAIVKTSHLNPVTSHD 59
            ++L+++L   IDED +YW++N+AK RA     +++EF  IV  +HL PVT  D
Sbjct:    9 KKLYEELKSAIDEDKMYWLKNDAKLRAVNSSKSYDEFRDIVAAAHLQPVTKKD 61
[Close]
BLAST of EMLSAG00000001044 vs. Select Arthropod Genomes
Match: XP_006567241.2 (PREDICTED: coiled-coil domain-containing protein 103 [Apis mellifera])

HSP 1 Score: 57.7658 bits (138), Expect = 3.837e-9
Identity = 62/242 (25.62%), Postives = 116/242 (47.93%), Query Frame = 0 
Query:    1 MSKL----DFEELHKDLLKLIDEDSLYWIRNEAKFRATRQGC-TFEEFDAIVKTSHLNPVTSHDIK-ELKKNQGVNWNPKI--NQGGQPPASSSKQFQ----------ENNLEGKRPSTISTSIEY-TSVPDLKS-LNPFRLERA-FKNECYSSELLVKIFIDILDNHATKHGCNSLSNSSIENLKTFIPKEDLKFIWNVIKAVHHSNRLDINIGFLSKKQIRTILNITRNVIHSIELKEEE 221
            MSKL    D++ +  +LL+ + ED LY ++N+AK RA  Q   T+E+F  +V  +HL P+   DIK E+KK     WNP I  N     P ++ ++ Q          EN  + + P T    I++  ++ + K   N  ++ R   + + + +E+   +F++++D       C  L N S  N        +++FI +++  +   NR  + I F+ + +      +  ++  + E + EE
Sbjct:    1 MSKLRLPIDYKNMQLELLEALKEDELYKLQNDAKIRAVEQNVPTYEDFRQMVNAAHLKPLKHSDIKYEVKK----LWNPIICTNDSNMMPFNNPEEDQSKDRLKLKENENIFKNEIPITYDQFIQFWKTIKEYKEKFNYLKILRHNLREKIFYTEIPPTLFVELID------IC--LQNVSDVN--------NIEFIVDILCILSKCNRFYLTINFMKQNEKEMCAQLFHDLFKNGEYQNEE 222
[Close]
BLAST of EMLSAG00000001044 vs. nr
Match: gi|1058086108|gb|JAS46714.1| (hypothetical protein g.16306 [Cuerna arida] >gi|1058113723|gb|JAS60510.1| hypothetical protein g.16307 [Cuerna arida])

HSP 1 Score: 66.2402 bits (160), Expect = 1.602e-9
Identity = 59/208 (28.37%), Postives = 98/208 (47.12%), Query Frame = 0 
Query:    1 MSKLDFEELHKDLLKLIDEDSLYWIRNEAKFRATRQGC-TFEEFDAIVKTSHLNPV-TSHDIKELKKNQGVNWNPKINQGGQPPASSSKQFQENNLEGKRPSTISTSIEYTSVPDLKSLNPFRLERAFK-----NECYSSELLVKIFIDILDNHATKHGCNSLSNSSIENLKTFIPK-EDLKFIWNVIKAVHHSNRLDINIGFLSKKQ 200
            +S++DF+EL K+L + I ED  YW  N+AK RA  Q   T+EEF  +VK +HL P+  S  +    + +G  WN  +++    P   + +  EN L   R              D +S+  FR  R F       E Y  +LL+K   + L N         +    +E L  F+P   ++ F+  V++ +  + R  I + FL++++
Sbjct:    4 ISEVDFQELEKELKESIKEDKKYWRENDAKLRAVNQNVSTYEEFRDMVKAAHLKPLEKSERLGADNRQKGCIWNSFVDRKPDLPPLKNMEI-ENVLNDIR-------------NDDESVTGFRYVRKFSLLRTNEERY--KLLMKTGTEELGNIFKTEIPTGVLGRIVEALLCFMPAVHEIIFVTQVLEILSKTKRFTITLDFLTREE 195
[Close]
BLAST of EMLSAG00000001044 vs. nr
Match: gi|1058143644|gb|JAS75470.1| (hypothetical protein g.40069 [Homalodisca liturata] >gi|1058175132|gb|JAS91214.1| hypothetical protein g.40070 [Homalodisca liturata])

HSP 1 Score: 65.4698 bits (158), Expect = 3.024e-9
Identity = 59/208 (28.37%), Postives = 98/208 (47.12%), Query Frame = 0 
Query:    1 MSKLDFEELHKDLLKLIDEDSLYWIRNEAKFRATRQGC-TFEEFDAIVKTSHLNPV-TSHDIKELKKNQGVNWNPKINQGGQPPASSSKQFQENNLEGKRPSTISTSIEYTSVPDLKSLNPFRLERAFK-----NECYSSELLVKIFIDILDNHATKHGCNSLSNSSIENLKTFIPK-EDLKFIWNVIKAVHHSNRLDINIGFLSKKQ 200
            +S++DF+EL K+L + I ED  YW  N+AK RA  Q   T+EEF  +VK +HL P+  S  +    + +G  WN  +++    P   + +  EN L   R              D +S+  FR  R F       E Y  +LL+K   + L N         +    +E L  F+P   ++ F+  V++ +  + R  I + FL++++
Sbjct:    4 ISEVDFKELEKELKESIKEDKKYWRENDAKLRAVNQNVSTYEEFRDMVKAAHLKPLEKSERLGADNRQKGCIWNSFVDRKPDLPPLKNMEI-ENVLNDIR-------------NDDESVTGFRYVRKFSLLRTNEERY--KLLMKTGTEELGNIFKTEIPTGVLGRIVEALLCFMPAVNEIIFVTQVLEILSKTKRFTITLDFLTREE 195
[Close]
BLAST of EMLSAG00000001044 vs. nr
Match: gi|1058168756|gb|JAS88026.1| (hypothetical protein g.40068, partial [Homalodisca liturata])

HSP 1 Score: 65.4698 bits (158), Expect = 3.225e-9
Identity = 58/203 (28.57%), Postives = 97/203 (47.78%), Query Frame = 0 
Query:    1 MSKLDFEELHKDLLKLIDEDSLYWIRNEAKFRATRQGC-TFEEFDAIVKTSHLNPV-TSHDIKELKKNQGVNWNPKINQGGQPPASSSKQFQENNLEGKRPSTISTSIEYTSVPDLKSLNPFRLERAFKNECYSSELLVKIFIDILDNHATKHGCNSLSNSSIENLKTFIPK-EDLKFIWNVIKAVHHSNRLDINIGFLSKKQ 200
            +S++DF+EL K+L + I ED  YW  N+AK RA  Q   T+EEF  +VK +HL P+  S  +    + +G  WN  +++    P   + +  EN L   R           SV   + +  F L R    E Y  +LL+K   + L N         +    +E L  F+P   ++ F+  V++ +  + R  I + FL++++
Sbjct:   19 ISEVDFKELEKELKESIKEDKKYWRENDAKLRAVNQNVSTYEEFRDMVKAAHLKPLEKSERLGADNRQKGCIWNSFVDRKPDLPPLKNMEI-ENVLNDIRNDD-------ESVTGFRYVRKFSLLRT-NEERY--KLLMKTGTEELGNIFKTEIPTGVLGRIVEALLCFMPAVNEIIFVTQVLEILSKTKRFTITLDFLTREE 210
[Close]
BLAST of EMLSAG00000001044 vs. nr
Match: gi|321471646|gb|EFX82618.1| (hypothetical protein DAPPUDRAFT_34230, partial [Daphnia pulex])

HSP 1 Score: 63.5438 bits (153), Expect = 1.203e-8
Identity = 55/224 (24.55%), Postives = 99/224 (44.20%), Query Frame = 0 
Query:    4 LDFEELHKDLLKLIDEDSLYWIRNEAKFRATRQGCTFEEFDAIVKTSHLNPVTSHDIKELKKNQGVNWNPKINQGGQPPASSSKQFQENNLEGKRPSTISTSIEYTSVPDLKSLNPFRLERAFKNECYSSE------LLVKIFIDILDNHATKHGCNSLSNSSIENLKTFIPKEDLKFIWNVIKAVHHSNRLDINIGFLSKKQIRTILNITRNVIHSIELKEEE 221
            + F ++ KDL+  ++ D+   + NEAK RA  Q  +++EF  IV+  HL PV S  +   K  +G  WN          A S K ++    E ++ +  + +  Y       SLN   +   F N    S+      +L KI    L+N  T     +L     E L  F P  D+  +  +++A+    R ++ + FL+  +  T   +   ++ S+  +E++
Sbjct:    1 VSFAQMEKDLISALESDAHNQLENEAKLRAISQRVSYDEFRDIVRGVHLKPVPSGSLSVNKPQKGRIWNNI--------ALSKKSYETEACEARKGTAATPANNY-------SLNQLPISAQFLNSWQQSDTKSRLLILYKIGPAGLNNIFTIDMPTALLGEIFEALLCFNPVTDVVAVIKLMEALTKIKRFNLIVHFLNASERATCQQLIHKLLASLVQREQD 209
[Close]
BLAST of EMLSAG00000001044 vs. nr
Match: gi|985392756|ref|XP_015363692.1| (PREDICTED: coiled-coil domain-containing protein 103 [Diuraphis noxia])

HSP 1 Score: 59.6918 bits (143), Expect = 2.993e-7
Identity = 29/71 (40.85%), Postives = 43/71 (60.56%), Query Frame = 0 
Query:    2 SKLDFEELHKDLLKLIDEDSLYWIRNEAKFRATRQGCTFEEFDAIVKTSHLNPVTSHDIKELKKNQGVNWN 72
            S  DF+ L  +L+  +++D  YW +N+AK RA +   T++EF  IVK +HL P+T  +I E K N    WN
Sbjct:    3 SSADFKSLEDELIDNVEKDVRYWQQNDAKLRAVKSVSTYQEFSDIVKAAHLRPLTKKEI-ECKSNPPTVWN 72
[Close]
BLAST of EMLSAG00000001044 vs. nr
Match: gi|642930431|ref|XP_008196398.1| (PREDICTED: coiled-coil domain-containing protein 103 [Tribolium castaneum] >gi|1008446930|ref|XP_015837622.1| PREDICTED: coiled-coil domain-containing protein 103 [Tribolium castaneum] >gi|1004398159|gb|EFA05848.2| hypothetical protein TcasGA2_TC008639 [Tribolium castaneum])

HSP 1 Score: 56.225 bits (134), Expect = 3.010e-7
Identity = 23/53 (43.40%), Postives = 36/53 (67.92%), Query Frame = 0 
Query:    7 EELHKDLLKLIDEDSLYWIRNEAKFRATRQGCTFEEFDAIVKTSHLNPVTSHD 59
            ++L+++L   IDED +YW++N+AK RA     +++EF  IV  +HL PVT  D
Sbjct:    9 KKLYEELKSAIDEDKMYWLKNDAKLRAVNSSKSYDEFRDIVAAAHLQPVTKKD 61
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BLAST of EMLSAG00000001044 vs. nr
Match: gi|1080064667|ref|XP_018574473.1| (PREDICTED: coiled-coil domain-containing protein 103 [Anoplophora glabripennis])

HSP 1 Score: 55.8398 bits (133), Expect = 4.295e-7
Identity = 25/65 (38.46%), Postives = 43/65 (66.15%), Query Frame = 0 
Query:    8 ELHKDLLKLIDEDSLYWIRNEAKFRATRQGCTFEEFDAIVKTSHLNPVTSHDIKELKKNQGVNWN 72
            +++K+L   I+++ LYWIRN+AK RA     +++EF  IV  +HL P++  DI E ++   ++WN
Sbjct:   12 DMYKELQSSINKEKLYWIRNDAKLRAVVTSQSYDEFRDIVAAAHLKPLSKKDITEKRQ---MSWN 73
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BLAST of EMLSAG00000001044 vs. nr
Match: gi|961123755|ref|XP_014783456.1| (PREDICTED: coiled-coil domain-containing protein 103-like [Octopus bimaculoides] >gi|918297025|gb|KOF72834.1| hypothetical protein OCBIM_22038820mg [Octopus bimaculoides])

HSP 1 Score: 58.5362 bits (140), Expect = 7.096e-7
Identity = 60/230 (26.09%), Postives = 106/230 (46.09%), Query Frame = 0 
Query:    4 LDFEELHKDLLKLIDEDSLYWIRNEAKFRATRQG-CTFEEFDAIVKTSHLNPVTSHDIKELKKNQGVNWNPKINQGGQPPASSSKQFQENNLEGKRPSTISTSIEYTSVPDLKSLNPFRLERAFKNECYSSELLVKIFIDILDNHATKHGCNSLSNSSIENLKTFIPKEDLKFIWNVIKAVHHSNRLDINIGFLSKKQIRTILNITRNVIHSIELKE--EEEEQIKVLER 230
            LDF+ L K+L   ++ D  YW  N+AKFRA RQ   ++EEF  IV+ SHL P+   D  + K  Q   WN          A+++ +  E  +  K P    TS E+        +  +   +  K   Y  E+L+ I  + L         N L    +  L+ +  KE+   I  ++  +  S+R  + + F++  +++   N+ + +   I  K+  E +E+ +VL++
Sbjct:    9 LDFKSLDKELKTAVELDEKYWRENDAKFRAVRQKVASYEEFRDIVEASHLKPLGKEDKIQEKFKQP--WNTIATSCNSQQAATTCEKTETQVPIKIP---KTSHEF--------VREWCRHKNSKQSQY--EMLMLITTEQLAVQFKTEIPNGLLGEILCVLEEYYSKENYLAIIEILDILSQSSRFSLCLQFMNANELKECHNLFKKLSSDISQKDDIESKERFQVLKK 223
The following BLAST results are available for this feature:
BLAST of EMLSAG00000001044 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO)
Total hits: 4
Match NameE-valueIdentityDescription
-1.056e-439.44symbol:ccdc103 "coiled-coil domain containing 103"... [more]
-1.980e-436.84symbol:CCDC103 "Uncharacterized protein" species:9... [more]
-2.433e-436.36symbol:CCDC103 "Uncharacterized protein" species:9... [more]
-5.287e-421.05symbol:CCDC103 "Uncharacterized protein" species:9... [more]
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BLAST of EMLSAG00000001044 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA)
Total hits: 6
Match NameE-valueIdentityDescription
gi|592837388|gb|GAXK01120156.1|3.376e-134.72TSA: Calanus finmarchicus comp352036_c0_seq7 trans... [more]
gi|592833005|gb|GAXK01124539.1|1.441e+040.48TSA: Calanus finmarchicus comp24864_c0_seq1 transc... [more]
gi|592833004|gb|GAXK01124540.1|1.564e+040.48TSA: Calanus finmarchicus comp24864_c0_seq2 transc... [more]
gi|592866972|gb|GAXK01090590.1|1.987e+036.96TSA: Calanus finmarchicus comp2073599_c0_seq1 tran... [more]
gi|592887716|gb|GAXK01070659.1|7.470e+030.65TSA: Calanus finmarchicus comp214159_c1_seq5 trans... [more]
gi|592941262|gb|GAXK01017291.1|9.630e+036.11TSA: Calanus finmarchicus comp73096_c2_seq1 transc... [more]
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BLAST of EMLSAG00000001044 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self)
Total hits: 1
Match NameE-valueIdentityDescription
EMLSAP000000010442.146e-176100.00pep:novel supercontig:LSalAtl2s:LSalAtl2s1172:2913... [more]
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BLAST of EMLSAG00000001044 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000001044 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods)
Total hits: 3
Match NameE-valueIdentityDescription
EFX82618.12.459e-1124.55hypothetical protein DAPPUDRAFT_34230, partial [Da... [more]
gb|EFA05848.2|6.152e-1043.40hypothetical protein TcasGA2_TC008639 [Tribolium c... [more]
XP_006567241.23.837e-925.62PREDICTED: coiled-coil domain-containing protein 1... [more]
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BLAST of EMLSAG00000001044 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017))
Total hits: 8
Match NameE-valueIdentityDescription
gi|1058086108|gb|JAS46714.1|1.602e-928.37hypothetical protein g.16306 [Cuerna arida] >gi|10... [more]
gi|1058143644|gb|JAS75470.1|3.024e-928.37hypothetical protein g.40069 [Homalodisca liturata... [more]
gi|1058168756|gb|JAS88026.1|3.225e-928.57hypothetical protein g.40068, partial [Homalodisca... [more]
gi|321471646|gb|EFX82618.1|1.203e-824.55hypothetical protein DAPPUDRAFT_34230, partial [Da... [more]
gi|985392756|ref|XP_015363692.1|2.993e-740.85PREDICTED: coiled-coil domain-containing protein 1... [more]
gi|642930431|ref|XP_008196398.1|3.010e-743.40PREDICTED: coiled-coil domain-containing protein 1... [more]
gi|1080064667|ref|XP_018574473.1|4.295e-738.46PREDICTED: coiled-coil domain-containing protein 1... [more]
gi|961123755|ref|XP_014783456.1|7.096e-726.09PREDICTED: coiled-coil domain-containing protein 1... [more]
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BLAST of EMLSAG00000001044 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1172supercontigLSalAtl2s1172:29135..29917 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Blast vs. GO2014-04-02
TblastN vs C. finmarchicus TSA2014-05-09
Blastp vs. self2014-05-10
Blastp vs. SwissProt2017-02-10
Blastp vs. Selected Arthropods2017-02-20
Blastp vs. NR (2/2017)2017-02-20
Blastp vs. Tigriopus kingsejongensis proteins2018-04-18
Properties
Property NameValue
Logic nameensemblgenomes
Descriptionaugustus_masked-LSalAtl2s1172-processed-gene-0.3
Biotypeprotein_coding
EvidenceIEA
NoteHypothetical protein
Cross References
External references for this gene
DatabaseAccession
Ensembl Metazoa (gene)EMLSAG00000001044 (primary cross-reference)
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
EMLSAT00000001044EMLSAT00000001044-696891Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at LSalAtl2s1172:29135..29917-

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAG00000001044-683810 ID=EMLSAG00000001044-683810|Name=EMLSAG00000001044|organism=Lepeophtheirus salmonis|type=gene|length=783bp|location=Sequence derived from alignment at LSalAtl2s1172:29135..29917- (Lepeophtheirus salmonis)
ATGAGCAAATTGGATTTTGAGGAGTTACATAAAGATTTATTGAAATTAAT
TGACGAAGACAGTCTTTATTGGATACGGAATGAAGCAAAGTTTAGAGCAA
CTCGACAGGTAAGCANNATTAAGGGATGATCTTAGAAAAACTCTCTAAAT
TTTCCACCTTTCTTCATACAGGGGTGCACCTTTGAGGAATTTGATGCAAT
TGTCAAGACATCCCATCTAAATCCAGTAACAAGTCATGATATAAAAGAGT
TGAAGAAAAATCAGGGWGTCAATTGGAACCCCAAAATAAATCAGGGTGGT
CAACCACCAGCCTCTTCCTCCAAACAATTTCAGGAAAATAATCTTGAAGG
TAAAAGGCCTTCTACTATTTCTACTTCGATTGAATATACATCTGTTCCGG
ACCTCAAGTCTCTGAATCCTTTCCGCCTAGAACGTGCCTTTAAAAACGAA
TGTTACTCTTCTGAGCTCTTGGTGAAGATCTTTATCGATATTTTGGATAA
TCATGCTACTAAACATGGGTGCAATTCTCTATCAAACTCTAGCATTGAAA
ATTTAAAAACTTTTATTCCTAAAGAAGACTTGAAATTCATTTGGAATGTC
ATAAAAGCAGTTCATCATTCTAATAGACTAGACATAAACATTGGATTCTT
GTCTAAAAAACAGATTCGAACTATTCTCAATATAACAAGGAATGTTATCC
ACTCAATTGAACTTAAAGAAGAGGAGGAAGAACAAATCAAAGTCTTGGAA
AGAAATGAAACCTTTTACAGAACCCTTATTTAA
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