EMLSAG00000001060, EMLSAG00000001060-683826 (gene) Lepeophtheirus salmonis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of EMLSAG00000001060 vs. GO
Match: - (symbol:CG7135 species:7227 "Drosophila melanogaster" [GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA] InterPro:IPR011009 GO:GO:0008152 EMBL:AE014298 SUPFAM:SSF56112 GO:GO:0016772 InterPro:IPR015897 SMART:SM00587 InterPro:IPR004119 Pfam:PF02958 GeneTree:ENSGT00730000111364 FlyBase:FBgn0030895 RefSeq:NP_573269.1 UniGene:Dm.20678 ProteinModelPortal:Q9VWY5 SMR:Q9VWY5 IntAct:Q9VWY5 MINT:MINT-317717 PRIDE:Q9VWY5 EnsemblMetazoa:FBtr0074515 GeneID:32793 KEGG:dme:Dmel_CG7135 UCSC:CG7135-RA InParanoid:Q9VWY5 OMA:EHFTERV PhylomeDB:Q9VWY5 GenomeRNAi:32793 NextBio:780411 Bgee:Q9VWY5 Uniprot:Q9VWY5) HSP 1 Score: 44.2838 bits (103), Expect = 8.116e-4 Identity = 41/164 (25.00%), Postives = 72/164 (43.90%), Query Frame = 0 Query: 22 IEVDIKPWADGSQGALSDILLVFVHASIPIGRSQSRAHH--LFVKVIPQSMRKLILKHRLFERELIMYRDVFPLLIKKVIDDRVPGFQFKHFLLPKYVFGAVKDGKGVLVLEDLSRSGYTINDSSFKLFDVDKLDLACGALAEFHALSMAFNEISDTKLEEIFP 183 I V + G + S+I A I ++S A L VK +P + ++ + ++ +E + Y + P L + ++ V F L PK+ + + + + +LEDL +GY + L D D L LAE+HAL+M E + + +P Sbjct: 33 IGVQLTNLTRGGENYCSNI----YRAQIKYRNAESCAMETSLIVKSMPDEKQAILARLHIYNKETLFYMHIKPKL-EALMWRAVDSFS-AWTLAPKHYYSTTQPEQTI-ILEDLCAAGYQLKCRQLGL-DFDHAALVMAKLAEYHALTMVMAEREPETIVDRYP 188
BLAST of EMLSAG00000001060 vs. C. finmarchicus
Match: gi|592948899|gb|GAXK01009654.1| (TSA: Calanus finmarchicus comp1243518_c0_seq1 transcribed RNA sequence) HSP 1 Score: 38.1206 bits (87), Expect = 2.648e-2 Identity = 45/185 (24.32%), Postives = 83/185 (44.86%), Query Frame = 0 Query: 41 LLVFVHASIPIG-RSQSRAHHLFVKVIP-QSMRKLILKHRL-----FERELIMYRDVF-PLLIKKVIDDRVPGFQFKHFLLPKYVFGAVKDGKGVLVLEDLSRSGYT-----INDSSF-------KLFDVDK--------LDLACGALAEFHALSMAFNEISDTKLEEIFPI-LDPKGLIWRFEK 196 L V S+ I + + + L VKV+P + +KH+ F +E+ +Y ++ P+ V ++ P +F + + G + LVLE+LS++G+ IN++ + D DK ++ +A+FHALS+ + + L EIFP ++ +G F+K Sbjct: 197 LAVLRQVSVSINVMNVEKDYSLIVKVLPTDDNERYSIKHKFKQLLRFSKEVQVYMEIVNPMF--SVCKEKQPHIKFMSPPVAEVFLGQMDALNDCLVLENLSKTGFVKYKEKINETECNNGENRDEKCDNDKAVSELISHCNIVLQNVAKFHALSLIISRLEGQALSEIFPFAVEGEGFRQDFKK 745
BLAST of EMLSAG00000001060 vs. C. finmarchicus
Match: gi|592804040|gb|GAXK01150528.1| (TSA: Calanus finmarchicus comp155541_c0_seq2 transcribed RNA sequence) HSP 1 Score: 36.965 bits (84), Expect = 5.668e-2 Identity = 35/120 (29.17%), Postives = 55/120 (45.83%), Query Frame = 0 Query: 59 HHLFVKVIPQSMRKLILKHRLFERELIMYRDVFPLLIKKVIDDRVPGFQFKHFLLPKYVFGAVKDG-KGVLVLEDLSRSGYTINDSSFKLFDVDK-------LDLACGALAEFHALSMAF 170 H FVK IP+S++ + + EREL+MY +FP L + D +P + + + Y + DG LV+++L Y F VDK + A +LA H L+ +F Sbjct: 1229 QHWFVK-IPKSLQTVAMD----ERELVMYNTIFPRLKVFLKDSLLPNEKVELPIPTIYFSSFMGDGVNDCLVIQNLCADRY---------FQVDKDTTKLAYMRAAMNSLASVHGLTFSF 1546
BLAST of EMLSAG00000001060 vs. C. finmarchicus
Match: gi|592804041|gb|GAXK01150527.1| (TSA: Calanus finmarchicus comp155541_c0_seq1 transcribed RNA sequence) HSP 1 Score: 36.965 bits (84), Expect = 5.719e-2 Identity = 35/120 (29.17%), Postives = 55/120 (45.83%), Query Frame = 0 Query: 59 HHLFVKVIPQSMRKLILKHRLFERELIMYRDVFPLLIKKVIDDRVPGFQFKHFLLPKYVFGAVKDG-KGVLVLEDLSRSGYTINDSSFKLFDVDK-------LDLACGALAEFHALSMAF 170 H FVK IP+S++ + + EREL+MY +FP L + D +P + + + Y + DG LV+++L Y F VDK + A +LA H L+ +F Sbjct: 1320 QHWFVK-IPKSLQTVAMD----ERELVMYNTIFPRLKVFLKDSLLPNEKVELPIPTIYFSSFMGDGVNDCLVIQNLCADRY---------FQVDKDTTKLAYMRAAMNSLASVHGLTFSF 1637
BLAST of EMLSAG00000001060 vs. C. finmarchicus
Match: gi|592830927|gb|GAXK01126617.1| (TSA: Calanus finmarchicus comp46221_c0_seq1 transcribed RNA sequence) HSP 1 Score: 31.9574 bits (71), Expect = 2.586e+0 Identity = 30/114 (26.32%), Postives = 51/114 (44.74%), Query Frame = 0 Query: 129 VLEDLSRSGYTINDSSFKLFDVDKLDLACGALAEFHALSMAFNEISDTKLEEIFPILDPKGLIWRFEKLSYYGNGLSDLSYLIYSSTSKFTRLEQPNFLVHSYLNVLTSTLTKL 242 L++L + Y++ D S K C +FH ++ F E++ +L+ + I+D W+ L+Y G D+SYL+ SS R + + Y +TLT L Sbjct: 1280 TLKELCKQRYSLEDDSIK----------CLQHGDFHFNNLLFKEVA-GQLKVM--IVD-----WQ---LTYCGRSAGDVSYLLMSSMDPQLRQVEEGRIKQKYFESFKATLTSL 1558
BLAST of EMLSAG00000001060 vs. C. finmarchicus
Match: gi|592785622|gb|GAXK01168946.1| (TSA: Calanus finmarchicus comp1734_c53_seq12 transcribed RNA sequence) HSP 1 Score: 29.261 bits (64), Expect = 5.257e+0 Identity = 13/53 (24.53%), Postives = 31/53 (58.49%), Query Frame = 0 Query: 199 YYGNGLSDLSYLIYSSTSKFTRLEQPNFLVHSYLNVLTSTLTKLELSNICINL 251 + G+ +S+LS+L ++ + F +H N+L+ ++KL++SN+ + + Sbjct: 67 FKGDNISNLSFLTFNLSKCF---------IHEEWNILSDRMSKLQMSNVVVTI 198
BLAST of EMLSAG00000001060 vs. C. finmarchicus
Match: gi|592809601|gb|GAXK01144967.1| (TSA: Calanus finmarchicus comp58621_c0_seq1 transcribed RNA sequence) HSP 1 Score: 30.4166 bits (67), Expect = 6.613e+0 Identity = 21/65 (32.31%), Postives = 34/65 (52.31%), Query Frame = 0 Query: 189 GLIWRFEK-------LSY----YGNGLSDLSYLIYSSTSKFTRLEQPNFLVHSYLNVLTSTLTKL 242 LIW+ EK ++Y + +D++ L+Y+STSK R E + ++ +Y LT TL L Sbjct: 412 ALIWKDEKEIREVVYMNYQQARFSQPATDVAILLYTSTSKVFRKEHLSRVLKTYHKTLTETLAIL 606
BLAST of EMLSAG00000001060 vs. C. finmarchicus
Match: gi|592793607|gb|GAXK01160961.1| (TSA: Calanus finmarchicus comp503899_c0_seq1 transcribed RNA sequence) HSP 1 Score: 30.4166 bits (67), Expect = 7.850e+0 Identity = 18/66 (27.27%), Postives = 35/66 (53.03%), Query Frame = 0 Query: 204 LSDLSYLIYSSTSKFTRLEQPNFLVHSYLNVLTSTLTKLELSNICINLSVDNFLNEFKKNMRYALP 269 +S YL++ +S+ +R + N+ NV+ ++ L +N+C N S + +L F N+ + LP Sbjct: 148 ISYFMYLLFEYSSQISRRREYNYWN*QKANVINFSVLILPGANVCQNFSQNYYLLSFSSNL*FHLP 345
BLAST of EMLSAG00000001060 vs. L. salmonis peptides
Match: EMLSAP00000001060 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1175:7053:18135:-1 gene:EMLSAG00000001060 transcript:EMLSAT00000001060 description:"maker-LSalAtl2s1175-snap-gene-0.13") HSP 1 Score: 550.821 bits (1418), Expect = 0.000e+0 Identity = 271/271 (100.00%), Postives = 271/271 (100.00%), Query Frame = 0 Query: 1 MCKETLXPPQKQEGFLSPSPKIEVDIKPWADGSQGALSDILLVFVHASIPIGRSQSRAHHLFVKVIPQSMRKLILKHRLFERELIMYRDVFPLLIKKVIDDRVPGFQFKHFLLPKYVFGAVKDGKGVLVLEDLSRSGYTINDSSFKLFDVDKLDLACGALAEFHALSMAFNEISDTKLEEIFPILDPKGLIWRFEKLSYYGNGLSDLSYLIYSSTSKFTRLEQPNFLVHSYLNVLTSTLTKLELSNICINLSVDNFLNEFKKNMRYALPIT 271 MCKETLXPPQKQEGFLSPSPKIEVDIKPWADGSQGALSDILLVFVHASIPIGRSQSRAHHLFVKVIPQSMRKLILKHRLFERELIMYRDVFPLLIKKVIDDRVPGFQFKHFLLPKYVFGAVKDGKGVLVLEDLSRSGYTINDSSFKLFDVDKLDLACGALAEFHALSMAFNEISDTKLEEIFPILDPKGLIWRFEKLSYYGNGLSDLSYLIYSSTSKFTRLEQPNFLVHSYLNVLTSTLTKLELSNICINLSVDNFLNEFKKNMRYALPIT Sbjct: 1 MCKETLXPPQKQEGFLSPSPKIEVDIKPWADGSQGALSDILLVFVHASIPIGRSQSRAHHLFVKVIPQSMRKLILKHRLFERELIMYRDVFPLLIKKVIDDRVPGFQFKHFLLPKYVFGAVKDGKGVLVLEDLSRSGYTINDSSFKLFDVDKLDLACGALAEFHALSMAFNEISDTKLEEIFPILDPKGLIWRFEKLSYYGNGLSDLSYLIYSSTSKFTRLEQPNFLVHSYLNVLTSTLTKLELSNICINLSVDNFLNEFKKNMRYALPIT 271
BLAST of EMLSAG00000001060 vs. L. salmonis peptides
Match: EMLSAP00000005179 (pep:novel supercontig:LSalAtl2s:LSalAtl2s273:444488:446819:1 gene:EMLSAG00000005179 transcript:EMLSAT00000005179 description:"augustus_masked-LSalAtl2s273-processed-gene-4.0") HSP 1 Score: 61.2326 bits (147), Expect = 5.824e-11 Identity = 39/124 (31.45%), Postives = 60/124 (48.39%), Query Frame = 0 Query: 51 IGRSQSRAHHLFVKVIPQS--MRKLILKHRLFERELIMYRDVFPLLIKKVIDDRVPGFQFKHFLLPKYVFGA--VKDGKGVLVLEDLSRSGYTINDSSFKLFDVDKLDLACGALAEFHALSMAF 170 + R S + V ++P+ +R I KH LF +EL Y+ + PL+ K V G ++ F +P YV G + G+G LVLED GY ++D S L + + L FH + A+ Sbjct: 40 VARVSSDSFAWLVSLVPEDEXLRLTIKKHGLFLKELSFYKVIKPLISKHVSQHLSEGKKWDLFRIPTYVDGEYDAESGRGFLVLEDFMEKGYKVDDPSLLLLNSSHIFRLIRQLGTFHGICSAY 163
BLAST of EMLSAG00000001060 vs. L. salmonis peptides
Match: EMLSAP00000013021 (pep:novel supercontig:LSalAtl2s:LSalAtl2s995:68039:91655:-1 gene:EMLSAG00000013021 transcript:EMLSAT00000013021 description:"maker-LSalAtl2s995-snap-gene-0.42") HSP 1 Score: 49.6766 bits (117), Expect = 3.583e-7 Identity = 37/135 (27.41%), Postives = 69/135 (51.11%), Query Frame = 0 Query: 56 SRAHHLFVKV---IPQSMRKLILKHRLFERELIMYRDVFPLLIKKVIDDRVPGFQFKHFLLPKYVFGAVKDGKG-VLVLEDLSRSGYTINDSSFKLFDVDKLDLACGALAEFHALSMAFNEISDTKLEEIFPILD 186 ++ H+LFVKV +++ ++R E+ +Y F ++K + RV +P+ +G+V + +G VL+++DLS+ GY D D++ A LA+FHA +A+ + ++EE + LD Sbjct: 143 AKMHNLFVKVPLAKKAKFERIVKRNRTLSHEVQVYSG-FIKDLQKFVKSRVGNII--SLNIPQIYYGSVDEPEGDVLIIQDLSKKGYASRDWFKHRLTHDEVKSAVYELAKFHACGLAYRMSLNEEIEEKYTYLD 274
BLAST of EMLSAG00000001060 vs. Select Arthropod Genomes
Match: EAA12813.5 (AGAP007946-PA, partial [Anopheles gambiae str. PEST]) HSP 1 Score: 53.5286 bits (127), Expect = 2.913e-7 Identity = 39/124 (31.45%), Postives = 64/124 (51.61%), Query Frame = 0 Query: 62 FVKVIPQSMRKL---ILKHRLFERELIMYRDVFPLLIKKVIDDRVPGFQFKHFLLPKYVFGAVKDGKGVLVLEDLSRSGYTINDSSFKLFDVDKLDLACGALAEFHALSMAFNEISDTKLEEIF 182 FVKVIP ++ KL I + F +E+++Y+ V P L +I R P +F G ++V E+L+ GY+I + + L D + L +A A+A+ HA S+ E S T + ++F Sbjct: 449 FVKVIPDNVPKLADYIKEMGCFRKEILLYKHVIPRLQDVMIGTR-PFVSTAYF----------TKGDRMIVFENLTSEGYSIVEHTKHLLDFEHLKVALQAVAKLHASSLILEERSKTPIPKLF 561
BLAST of EMLSAG00000001060 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold40_size501252-snap-gene-0.13 (protein:Tk06152 transcript:maker-scaffold40_size501252-snap-gene-0.13-mRNA-1 annotation:"PREDICTED: uncharacterized protein LOC102673307") HSP 1 Score: 102.064 bits (253), Expect = 6.090e-27 Identity = 57/136 (41.91%), Postives = 85/136 (62.50%), Query Frame = 0 Query: 22 IEVDIKPWADGSQGALSDILLVFVHASI---PIGRSQSRAHHLFVKVIPQSMRKLILKHRLFERELIMYRDVFPLLIKKVIDDRVPGFQFKHFLLPKYVFG-AVKDGKGVLVLEDLSRSGYTINDSSFKLFDVDKL 153 I+VDI S+G LSDIL VF H + P ++ ++ FVKVIP+ M L+ K +LF++E+ YRDV P L ++ + ++ P F+ KHF +PKY +G ++DGKGVLVL+D S G+ D +L D++ L Sbjct: 39 IQVDIGRHEADSEGVLSDILKVFCHLELRKDPGSHGRTVMYNWFVKVIPRQMSDLVQKAQLFQKEIAFYRDVVPYL-QEFVRNQSPTFKLKHFKIPKYYYGDTIEDGKGVLVLQDCSMKGFKSFDGITQLMDLEHL 173
BLAST of EMLSAG00000001060 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold691_size110934-snap-gene-0.35 (protein:Tk06101 transcript:maker-scaffold691_size110934-snap-gene-0.35-mRNA-1 annotation:"AGAP001552-PA") HSP 1 Score: 76.6406 bits (187), Expect = 3.867e-16 Identity = 49/151 (32.45%), Postives = 86/151 (56.95%), Query Frame = 0 Query: 57 RAHHLFVKVIP--QSMRKLILKHRLFERELIMYRDVFPLLIKKVIDDRVPGFQFK--HFLLPKYVFGAV--KDGKGVLVLEDLSRSGYTINDSSFKLFDVDKLDLACGALAEFHALSMAFNEISDTKLEEIFPILD-PKGLIWRFEKLSYY 200 +AHH V+V+P + +R +I++H LF +EL+++ + P L K + +R G + +F +PK+V+G +G GV+V ED GY D S + + + LA FHA+S+A+ + + +LE+++PILD +G W ++ Y Sbjct: 82 KAHHFVVEVVPSDEDLRDVIVRHNLFTKELLLHEKLLPQL-KAYVKNRSNGDRTVDVNFCVPKFVYGDYDETEGNGVMVFEDHVEMGYKRIDKSLMILEAKHVREVVQNLATFHAISVAYQKTENVQLEKLYPILDGERGSTWFQSDMTAY 231
BLAST of EMLSAG00000001060 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold332_size203095-snap-gene-1.25 (protein:Tk10842 transcript:maker-scaffold332_size203095-snap-gene-1.25-mRNA-1 annotation:"uncharacterized oxidoreductase dhs-27-like") HSP 1 Score: 51.2174 bits (121), Expect = 1.449e-7 Identity = 38/138 (27.54%), Postives = 70/138 (50.72%), Query Frame = 0 Query: 59 HHLFVKVIPQSMRK---LILKHRLFERELIMY----RDVFPLLIKKVIDD---RVPGFQFKHFLLPKYVFGAVKDGKGVLVLEDLSRSGYTINDSSFKLFDVDKLDLACGALAEFHALSMAFNEISDTKLEEIFPILD 186 HHLFVK+ P+ K ++ ++R E E+ +Y +D+ + K+V D ++P + H G+V D VL++EDL++ G+ D +++ LA LA+FHA +A+ ++ + +P L+ Sbjct: 211 HHLFVKIPPKRTAKFERMVRRNRTLEHEVKVYAEFLKDLKSFVEKRVGDAVTLKIP--ELYHGYQATDSDGSVPDNH-VLIIEDLTKRGFKTRDWFTHKLTHEEVTLAVSELAKFHACGLAYRMSLKEEINDKYPYLE 345
BLAST of EMLSAG00000001060 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold167_size293163-snap-gene-0.9 (protein:Tk08574 transcript:maker-scaffold167_size293163-snap-gene-0.9-mRNA-1 annotation:"uncharacterized oxidoreductase dhs-27-like") HSP 1 Score: 48.9062 bits (115), Expect = 7.789e-7 Identity = 43/147 (29.25%), Postives = 74/147 (50.34%), Query Frame = 0 Query: 30 ADGSQGALSDI--LLVFVHASIPIGRSQSRAHHLFVKVIP---QSMRKLILKHRLFERELIMYRDVFPLLIKKVIDDRVPGFQFKHFLLPKYVFGAV--KDGKGVLVLEDLSRSGYTINDSSFKLFDVDKLDLACGALAEFHALSMA 169 S G LS LL P+G S+ ++ F+K++P + +KL+L ++F RE+ + PLL K+ +D + + P+ V+G+ +G G++VL DL+ G+ + F L ++ +L+ LAEFHA A Sbjct: 52 CQSSHGYLSTTYKLLAHFQCENPLG-SEDCSYAFFLKMLPGVGEKYQKLVLSTQVFRREIEAQFHLLPLL-KQFVDHQ--NLKASFVPSPEIVYGSYDEAEGDGIIVLMDLNERGFHPLNHYFGL-NLGQLEKVVEQLAEFHASGSA 193 The following BLAST results are available for this feature:
BLAST of EMLSAG00000001060 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO) Total hits: 1
BLAST of EMLSAG00000001060 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA) Total hits: 17
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BLAST of EMLSAG00000001060 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self) Total hits: 3
BLAST of EMLSAG00000001060 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt) Total hits: 0
BLAST of EMLSAG00000001060 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods) Total hits: 1
BLAST of EMLSAG00000001060 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017)) Total hits: 0
BLAST of EMLSAG00000001060 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins) Total hits: 4
Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Cross References
External references for this gene
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at LSalAtl2s1175:7053..18135- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>EMLSAG00000001060-683826 ID=EMLSAG00000001060-683826|Name=EMLSAG00000001060|organism=Lepeophtheirus salmonis|type=gene|length=11083bp|location=Sequence derived from alignment at LSalAtl2s1175:7053..18135- (Lepeophtheirus salmonis)back to top Add to Basket
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