EMLSAG00000001096, EMLSAG00000001096-683862 (gene) Lepeophtheirus salmonis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of EMLSAG00000001096 vs. GO
Match: - (symbol:hsp70.3 "heat shock cognate 70-kd protein, tandem duplicate 3" species:7955 "Danio rerio" [GO:0048593 "camera-type eye morphogenesis" evidence=IMP] [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006950 "response to stress" evidence=IEA] Pfam:PF00012 Prosite:PS01036 ZFIN:ZDB-GENE-110713-1 GO:GO:0005524 GO:GO:0048593 InterPro:IPR013126 PRINTS:PR00301 InterPro:IPR018181 PROSITE:PS00297 PROSITE:PS00329 HOGENOM:HOG000228135 HOVERGEN:HBG051845 KO:K03283 CTD:30671 UniGene:Dr.115994 EMBL:AF210640 RefSeq:NP_571472.1 UniGene:Dr.114305 ProteinModelPortal:Q9IAC1 SMR:Q9IAC1 PRIDE:Q9IAC1 GeneID:30671 KEGG:dre:30671 InParanoid:Q9IAC1 NextBio:20807026 Uniprot:Q9IAC1) HSP 1 Score: 44.2838 bits (103), Expect = 5.177e-5 Identity = 20/38 (52.63%), Postives = 28/38 (73.68%), Query Frame = 0 Query: 6 REGRKTNRNLESYCYNLKSTVEKDELRGKLSQEDKETV 43 RE +LESY +N+KS+VE D L+GK+S+EDK+ V Sbjct: 535 REKISAKNSLESYAFNMKSSVEDDNLKGKISEEDKKRV 572
BLAST of EMLSAG00000001096 vs. GO
Match: - (symbol:hspa8 "heat shock protein 8" species:7955 "Danio rerio" [GO:0031101 "fin regeneration" evidence=IEP] [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006950 "response to stress" evidence=IEA] Pfam:PF00012 Prosite:PS01036 ZFIN:ZDB-GENE-990415-92 GO:GO:0005524 GO:GO:0031101 eggNOG:COG0443 InterPro:IPR013126 PRINTS:PR00301 InterPro:IPR018181 PROSITE:PS00297 PROSITE:PS00329 HOGENOM:HOG000228135 HOVERGEN:HBG051845 EMBL:L77146 UniGene:Dr.75087 ProteinModelPortal:Q90473 SMR:Q90473 STRING:7955.ENSDARP00000090766 PRIDE:Q90473 InParanoid:Q90473 PRO:PR:Q90473 Uniprot:Q90473) HSP 1 Score: 43.1282 bits (100), Expect = 1.319e-4 Identity = 18/31 (58.06%), Postives = 26/31 (83.87%), Query Frame = 0 Query: 15 LESYCYNLKSTVEKDELRGKLSQEDKETVKD 45 LESY +N+KSTVE ++L+GK+S EDK+ + D Sbjct: 542 LESYAFNMKSTVEDEKLKGKISDEDKQKILD 572
BLAST of EMLSAG00000001096 vs. GO
Match: - (symbol:hsp70l "heat shock cognate 70-kd protein, like" species:7955 "Danio rerio" [GO:0009408 "response to heat" evidence=IDA] [GO:0046686 "response to cadmium ion" evidence=IDA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006950 "response to stress" evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA] Pfam:PF00012 Prosite:PS01036 ZFIN:ZDB-GENE-050321-1 GO:GO:0005524 GO:GO:0046686 GO:GO:0009408 InterPro:IPR013126 PRINTS:PR00301 InterPro:IPR018181 PROSITE:PS00297 PROSITE:PS00329 HOVERGEN:HBG051845 EMBL:BC171454 EMBL:BC171480 UniGene:Dr.115994 Uniprot:B7ZV46) HSP 1 Score: 43.1282 bits (100), Expect = 1.364e-4 Identity = 19/38 (50.00%), Postives = 28/38 (73.68%), Query Frame = 0 Query: 6 REGRKTNRNLESYCYNLKSTVEKDELRGKLSQEDKETV 43 RE +LESY +N+K++VE D L+GK+S+EDK+ V Sbjct: 535 REKISAKNSLESYAFNMKNSVEDDNLKGKISEEDKKRV 572
BLAST of EMLSAG00000001096 vs. GO
Match: - (symbol:HSPA2 "Heat shock-related 70 kDa protein 2" species:9606 "Homo sapiens" [GO:0000795 "synaptonemal complex" evidence=IEA] [GO:0001673 "male germ cell nucleus" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0006986 "response to unfolded protein" evidence=TAS] [GO:0007140 "male meiosis" evidence=TAS] [GO:0007141 "male meiosis I" evidence=IEA] [GO:0007286 "spermatid development" evidence=IEA] [GO:0009986 "cell surface" evidence=IEA] [GO:0031662 "positive regulation of cyclin-dependent protein serine/threonine kinase activity involved in G2/M transition of mitotic cell cycle" evidence=IEA] [GO:0036128 "CatSper complex" evidence=ISS] [GO:0051082 "unfolded protein binding" evidence=TAS] [GO:0051861 "glycolipid binding" evidence=IEA] [GO:0070062 "extracellular vesicular exosome" evidence=IDA] [GO:0070194 "synaptonemal complex disassembly" evidence=IEA] [GO:0072562 "blood microparticle" evidence=IDA] Pfam:PF00012 Prosite:PS01036 GO:GO:0005739 GO:GO:0005524 GO:GO:0070062 Reactome:REACT_115566 GO:GO:0072562 GO:GO:0009986 GO:GO:0007286 GO:GO:0051082 Reactome:REACT_111183 GO:GO:0001673 GO:GO:0007140 GO:GO:0006986 eggNOG:COG0443 InterPro:IPR013126 PRINTS:PR00301 InterPro:IPR018181 PROSITE:PS00297 PROSITE:PS00329 GO:GO:0007141 GO:GO:0051861 GO:GO:0070194 GO:GO:0036128 HOGENOM:HOG000228135 GO:GO:0000795 HOVERGEN:HBG051845 KO:K03283 OrthoDB:EOG7PCJGF TreeFam:TF105042 CTD:3306 EMBL:L26336 EMBL:U56725 EMBL:BT009815 EMBL:DQ489378 EMBL:BC001752 EMBL:BC036107 EMBL:AH006615 PIR:A55719 PIR:I37564 RefSeq:NP_068814.2 UniGene:Hs.432648 PDB:3I33 PDB:4FSV PDBsum:3I33 PDBsum:4FSV ProteinModelPortal:P54652 SMR:P54652 BioGrid:109538 IntAct:P54652 MINT:MINT-1146083 STRING:9606.ENSP00000247207 ChEMBL:CHEMBL2062348 PhosphoSite:P54652 DMDM:1708307 REPRODUCTION-2DPAGE:IPI00007702 PaxDb:P54652 PeptideAtlas:P54652 PRIDE:P54652 DNASU:3306 Ensembl:ENST00000247207 Ensembl:ENST00000394709 GeneID:3306 KEGG:hsa:3306 UCSC:uc001xhj.3 GeneCards:GC14P065002 HGNC:HGNC:5235 HPA:HPA000798 MIM:140560 neXtProt:NX_P54652 PharmGKB:PA29501 InParanoid:P54652 OMA:RDIAGNK PhylomeDB:P54652 ChiTaRS:HSPA2 EvolutionaryTrace:P54652 GeneWiki:HSPA2 GenomeRNAi:3306 NextBio:13115 PRO:PR:P54652 Bgee:P54652 CleanEx:HS_HSPA2 Genevestigator:P54652 GO:GO:0031662 Uniprot:P54652) HSP 1 Score: 43.1282 bits (100), Expect = 1.373e-4 Identity = 20/48 (41.67%), Postives = 30/48 (62.50%), Query Frame = 0 Query: 3 KSTREGRKTNRNLESYCYNLKSTVEKDELRGKLSQEDKETVKDNISTV 50 ++ R+ LESY YN+K TVE ++LRGK+S++DK + D V Sbjct: 533 EANRDRVAAKNALESYTYNIKQTVEDEKLRGKISEQDKNKILDKCQEV 580
BLAST of EMLSAG00000001096 vs. GO
Match: - (symbol:HSPA8 "Heat shock cognate 71 kDa protein" species:9031 "Gallus gallus" [GO:0000974 "Prp19 complex" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0030529 "ribonucleoprotein complex" evidence=IEA] [GO:0042623 "ATPase activity, coupled" evidence=IEA] [GO:0045892 "negative regulation of transcription, DNA-templated" evidence=IEA] [GO:0051082 "unfolded protein binding" evidence=IEA] [GO:0051085 "chaperone mediated protein folding requiring cofactor" evidence=IEA] [GO:0051726 "regulation of cell cycle" evidence=IEA] [GO:0070062 "extracellular vesicular exosome" evidence=IEA] Pfam:PF00012 Prosite:PS01036 GO:GO:0005524 GO:GO:0045892 GO:GO:0009986 GO:GO:0005730 GO:GO:0030529 InterPro:IPR013126 PRINTS:PR00301 InterPro:IPR018181 PROSITE:PS00297 PROSITE:PS00329 GO:GO:0000974 GeneTree:ENSGT00740000115252 OrthoDB:EOG7PCJGF OMA:PMIVVEY EMBL:AADN03008320 ProteinModelPortal:F1NWP3 SMR:F1NWP3 PRIDE:F1NWP3 Ensembl:ENSGALT00000010524 ArrayExpress:F1NWP3 Uniprot:F1NWP3) HSP 1 Score: 42.743 bits (99), Expect = 1.773e-4 Identity = 18/45 (40.00%), Postives = 32/45 (71.11%), Query Frame = 0 Query: 6 REGRKTNRNLESYCYNLKSTVEKDELRGKLSQEDKETVKDNISTV 50 R+ + +LESY +N+K+TVE ++L+GK+S EDK+ + D + + Sbjct: 533 RDKVSSKNSLESYAFNMKATVEDEKLQGKISDEDKQKILDKCNEI 577
BLAST of EMLSAG00000001096 vs. GO
Match: - (symbol:hsc70 "heat shock cognate 70" species:7955 "Danio rerio" [GO:0005575 "cellular_component" evidence=ND] [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] Pfam:PF00012 Prosite:PS01036 ZFIN:ZDB-GENE-040426-1221 GO:GO:0005524 InterPro:IPR013126 PRINTS:PR00301 InterPro:IPR018181 PROSITE:PS00297 PROSITE:PS00329 HOGENOM:HOG000228135 HOVERGEN:HBG051845 GeneTree:ENSGT00740000115252 KO:K03283 OrthoDB:EOG7PCJGF TreeFam:TF105042 EMBL:CR944667 EMBL:BC056797 RefSeq:NP_956908.1 UniGene:Dr.85225 STRING:7955.ENSDARP00000039324 Ensembl:ENSDART00000031418 GeneID:393586 KEGG:dre:393586 CTD:393586 InParanoid:Q6PGX4 OMA:MVINEGG NextBio:20814606 Uniprot:Q6PGX4) HSP 1 Score: 42.743 bits (99), Expect = 1.872e-4 Identity = 21/45 (46.67%), Postives = 29/45 (64.44%), Query Frame = 0 Query: 6 REGRKTNRNLESYCYNLKSTVEKDELRGKLSQEDKETVKDNISTV 50 RE LES +N+KSTVE D+L+ K+S EDK+T+ D + V Sbjct: 533 REKVTAKNTLESLAFNMKSTVEDDKLQDKISPEDKKTITDKCNEV 577
BLAST of EMLSAG00000001096 vs. GO
Match: - (symbol:HSPA2 "Uncharacterized protein" species:9823 "Sus scrofa" [GO:0000795 "synaptonemal complex" evidence=IEA] [GO:0001673 "male germ cell nucleus" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0007141 "male meiosis I" evidence=IEA] [GO:0007286 "spermatid development" evidence=IEA] [GO:0009986 "cell surface" evidence=IEA] [GO:0031662 "positive regulation of cyclin-dependent protein serine/threonine kinase activity involved in G2/M transition of mitotic cell cycle" evidence=IEA] [GO:0036128 "CatSper complex" evidence=IEA] [GO:0051861 "glycolipid binding" evidence=IEA] [GO:0070194 "synaptonemal complex disassembly" evidence=IEA] Pfam:PF00012 Prosite:PS01036 GO:GO:0005739 GO:GO:0005524 GO:GO:0009986 GO:GO:0007286 GO:GO:0001673 InterPro:IPR013126 PRINTS:PR00301 InterPro:IPR018181 PROSITE:PS00297 PROSITE:PS00329 GO:GO:0007141 GO:GO:0051861 GO:GO:0070194 GO:GO:0036128 GO:GO:0000795 GeneTree:ENSGT00740000115252 KO:K03283 OrthoDB:EOG7PCJGF TreeFam:TF105042 CTD:3306 GO:GO:0031662 EMBL:CT842159 RefSeq:XP_003356782.1 Ensembl:ENSSSCT00000002532 GeneID:100621324 KEGG:ssc:100621324 OMA:NETHTFT Uniprot:F1SA70) HSP 1 Score: 41.9726 bits (97), Expect = 3.138e-4 Identity = 19/48 (39.58%), Postives = 30/48 (62.50%), Query Frame = 0 Query: 3 KSTREGRKTNRNLESYCYNLKSTVEKDELRGKLSQEDKETVKDNISTV 50 ++ R+ +ESY YN+K TVE ++LRGK+S++DK + D V Sbjct: 533 EANRDRVAAKNAVESYTYNIKQTVEDEKLRGKISEQDKNKILDKCQEV 580
BLAST of EMLSAG00000001096 vs. GO
Match: - (symbol:P08106 "Heat shock 70 kDa protein" species:9031 "Gallus gallus" [GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005576 "extracellular region" evidence=IDA] [GO:0009408 "response to heat" evidence=IDA] Pfam:PF00012 Prosite:PS01036 GO:GO:0005524 GO:GO:0005576 GO:GO:0009408 eggNOG:COG0443 InterPro:IPR013126 PRINTS:PR00301 InterPro:IPR018181 PROSITE:PS00297 PROSITE:PS00329 HOGENOM:HOG000228135 HOVERGEN:HBG051845 KO:K03283 EMBL:J02579 PIR:A25646 RefSeq:NP_001006686.1 UniGene:Gga.4942 ProteinModelPortal:P08106 SMR:P08106 BioGrid:684024 IntAct:P08106 STRING:9031.ENSGALP00000019120 PaxDb:P08106 PRIDE:P08106 GeneID:423504 KEGG:gga:423504 CTD:3306 InParanoid:P08106 NextBio:20825972 PRO:PR:P08106 Uniprot:P08106) HSP 1 Score: 41.9726 bits (97), Expect = 3.339e-4 Identity = 18/32 (56.25%), Postives = 26/32 (81.25%), Query Frame = 0 Query: 14 NLESYCYNLKSTVEKDELRGKLSQEDKETVKD 45 +LESY YN+K TVE ++L+GK+S +DK+ V D Sbjct: 544 SLESYTYNMKQTVEDEKLKGKISDQDKQKVLD 575
BLAST of EMLSAG00000001096 vs. GO
Match: - (symbol:Hspa2 "Heat shock-related 70 kDa protein 2" species:10116 "Rattus norvegicus" [GO:0000795 "synaptonemal complex" evidence=IEA] [GO:0001673 "male germ cell nucleus" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0006950 "response to stress" evidence=IEA] [GO:0007141 "male meiosis I" evidence=IEA] [GO:0007275 "multicellular organismal development" evidence=IEA] [GO:0007286 "spermatid development" evidence=IEA] [GO:0009986 "cell surface" evidence=IEA] [GO:0031662 "positive regulation of cyclin-dependent protein serine/threonine kinase activity involved in G2/M transition of mitotic cell cycle" evidence=IEA] [GO:0036128 "CatSper complex" evidence=ISS] [GO:0051861 "glycolipid binding" evidence=IEA] [GO:0070194 "synaptonemal complex disassembly" evidence=IEA] Pfam:PF00012 Prosite:PS01036 RGD:620664 GO:GO:0007275 GO:GO:0005739 GO:GO:0005524 GO:GO:0006950 GO:GO:0009986 GO:GO:0007286 GO:GO:0001673 eggNOG:COG0443 InterPro:IPR013126 PRINTS:PR00301 InterPro:IPR018181 PROSITE:PS00297 PROSITE:PS00329 GO:GO:0007141 GO:GO:0051861 GO:GO:0070194 GO:GO:0036128 HOGENOM:HOG000228135 GO:GO:0000795 HOVERGEN:HBG051845 GeneTree:ENSGT00740000115252 KO:K03283 OrthoDB:EOG7PCJGF TreeFam:TF105042 CTD:3306 OMA:RDIAGNK GO:GO:0031662 EMBL:X15705 EMBL:BC081803 PIR:S08211 RefSeq:NP_068635.1 RefSeq:XP_006240309.1 UniGene:Rn.211303 ProteinModelPortal:P14659 SMR:P14659 BioGrid:248845 IntAct:P14659 STRING:10116.ENSRNOP00000008504 PhosphoSite:P14659 PaxDb:P14659 PRIDE:P14659 Ensembl:ENSRNOT00000008504 GeneID:60460 KEGG:rno:60460 UCSC:RGD:620664 InParanoid:P14659 NextBio:612212 PRO:PR:P14659 Genevestigator:P14659 Uniprot:P14659) HSP 1 Score: 41.9726 bits (97), Expect = 3.367e-4 Identity = 19/48 (39.58%), Postives = 30/48 (62.50%), Query Frame = 0 Query: 3 KSTREGRKTNRNLESYCYNLKSTVEKDELRGKLSQEDKETVKDNISTV 50 ++ R+ +ESY YN+K TVE ++LRGK+S++DK + D V Sbjct: 533 EANRDRVAAKNAVESYTYNIKQTVEDEKLRGKISEQDKNKILDKCQEV 580
BLAST of EMLSAG00000001096 vs. GO
Match: - (symbol:Hspa2 "heat shock protein 2" species:10116 "Rattus norvegicus" [GO:0000795 "synaptonemal complex" evidence=IEA;ISO] [GO:0001673 "male germ cell nucleus" evidence=IEA;ISO] [GO:0001934 "positive regulation of protein phosphorylation" evidence=ISO] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA;ISO] [GO:0006950 "response to stress" evidence=IEA] [GO:0007140 "male meiosis" evidence=ISO] [GO:0007141 "male meiosis I" evidence=IEA;ISO] [GO:0007275 "multicellular organismal development" evidence=IEA] [GO:0007286 "spermatid development" evidence=IEA;ISO] [GO:0009986 "cell surface" evidence=IEA;ISO] [GO:0031662 "positive regulation of cyclin-dependent protein serine/threonine kinase activity involved in G2/M transition of mitotic cell cycle" evidence=IEA;ISO] [GO:0036128 "CatSper complex" evidence=ISO;ISS] [GO:0051861 "glycolipid binding" evidence=IEA;ISO] [GO:0070062 "extracellular vesicular exosome" evidence=ISO] [GO:0070194 "synaptonemal complex disassembly" evidence=IEA;ISO] [GO:0072562 "blood microparticle" evidence=ISO] Pfam:PF00012 Prosite:PS01036 RGD:620664 GO:GO:0007275 GO:GO:0005739 GO:GO:0005524 GO:GO:0006950 GO:GO:0009986 GO:GO:0007286 GO:GO:0001673 eggNOG:COG0443 InterPro:IPR013126 PRINTS:PR00301 InterPro:IPR018181 PROSITE:PS00297 PROSITE:PS00329 GO:GO:0007141 GO:GO:0051861 GO:GO:0070194 GO:GO:0036128 HOGENOM:HOG000228135 GO:GO:0000795 HOVERGEN:HBG051845 GeneTree:ENSGT00740000115252 KO:K03283 OrthoDB:EOG7PCJGF TreeFam:TF105042 CTD:3306 OMA:RDIAGNK GO:GO:0031662 EMBL:X15705 EMBL:BC081803 PIR:S08211 RefSeq:NP_068635.1 RefSeq:XP_006240309.1 UniGene:Rn.211303 ProteinModelPortal:P14659 SMR:P14659 BioGrid:248845 IntAct:P14659 STRING:10116.ENSRNOP00000008504 PhosphoSite:P14659 PaxDb:P14659 PRIDE:P14659 Ensembl:ENSRNOT00000008504 GeneID:60460 KEGG:rno:60460 UCSC:RGD:620664 InParanoid:P14659 NextBio:612212 PRO:PR:P14659 Genevestigator:P14659 Uniprot:P14659) HSP 1 Score: 41.9726 bits (97), Expect = 3.367e-4 Identity = 19/48 (39.58%), Postives = 30/48 (62.50%), Query Frame = 0 Query: 3 KSTREGRKTNRNLESYCYNLKSTVEKDELRGKLSQEDKETVKDNISTV 50 ++ R+ +ESY YN+K TVE ++LRGK+S++DK + D V Sbjct: 533 EANRDRVAAKNAVESYTYNIKQTVEDEKLRGKISEQDKNKILDKCQEV 580
BLAST of EMLSAG00000001096 vs. C. finmarchicus
Match: gi|592778785|gb|GAXK01175783.1| (TSA: Calanus finmarchicus comp2626_c0_seq1 transcribed RNA sequence) HSP 1 Score: 32.7278 bits (73), Expect = 8.468e-2 Identity = 13/41 (31.71%), Postives = 28/41 (68.29%), Query Frame = 0 Query: 17 SYCYNLKSTVEKDELRGKLSQEDKETVKDNI-STVKHVGGN 56 SYC+N+K+T+E ++++ K+S++D + + D +K + N Sbjct: 2 SYCFNMKTTIEDEKVKDKISEDDMKKISDKCEEAIKWLDAN 124
BLAST of EMLSAG00000001096 vs. C. finmarchicus
Match: gi|592901337|gb|GAXK01057038.1| (TSA: Calanus finmarchicus comp5600893_c0_seq1 transcribed RNA sequence) HSP 1 Score: 31.187 bits (69), Expect = 2.123e-1 Identity = 14/33 (42.42%), Postives = 24/33 (72.73%), Query Frame = 0 Query: 15 LESYCYNLKSTVEKDELRGKLSQEDKETVKDNI 47 LE+YCY++K+T+ ++L+ KLS +DK + I Sbjct: 156 LENYCYSMKNTLGDEKLKDKLSDDDKSKAESAI 254
BLAST of EMLSAG00000001096 vs. C. finmarchicus
Match: gi|592848386|gb|GAXK01109158.1| (TSA: Calanus finmarchicus comp2844883_c0_seq1 transcribed RNA sequence) HSP 1 Score: 30.4166 bits (67), Expect = 4.918e-1 Identity = 11/33 (33.33%), Postives = 24/33 (72.73%), Query Frame = 0 Query: 15 LESYCYNLKSTVEKDELRGKLSQEDKETVKDNI 47 LE+Y + +++TV ++ GK+ + DK+TV++ + Sbjct: 163 LENYAFQIRNTVRDEKFAGKIEEGDKKTVEEAV 261
BLAST of EMLSAG00000001096 vs. C. finmarchicus
Match: gi|592858105|gb|GAXK01099457.1| (TSA: Calanus finmarchicus comp7795077_c0_seq1 transcribed RNA sequence) HSP 1 Score: 30.4166 bits (67), Expect = 5.563e-1 Identity = 14/33 (42.42%), Postives = 24/33 (72.73%), Query Frame = 0 Query: 15 LESYCYNLKSTVEKDELRGKLSQEDKETVKDNI 47 LE+Y Y++KST++ ++L K+S +DK V + I Sbjct: 146 LENYTYSIKSTMDDEKLASKISDDDKAKVSEKI 244
BLAST of EMLSAG00000001096 vs. C. finmarchicus
Match: gi|592858343|gb|GAXK01099219.1| (TSA: Calanus finmarchicus comp650866_c0_seq1 transcribed RNA sequence) HSP 1 Score: 28.4906 bits (62), Expect = 2.812e+0 Identity = 18/69 (26.09%), Postives = 32/69 (46.38%), Query Frame = 0 Query: 19 CYNLKSTVEKDELRGKLSQEDKETVKDNISTVKHVG------------GNIIFWGCLPTKRKDNSSGSK 75 C NL ++ ++GK+ +++ DN+S+ K +G NI+FW C + N+S K Sbjct: 727 CINLNILIQ---MKGKILKQNLSAPSDNLSSAKSIGETMDILLIFLIQQNIVFWLC*INLKMPNTSKFK 924
BLAST of EMLSAG00000001096 vs. C. finmarchicus
Match: gi|592906070|gb|GAXK01052305.1| (TSA: Calanus finmarchicus comp28115_c0_seq1 transcribed RNA sequence) HSP 1 Score: 27.335 bits (59), Expect = 6.353e+0 Identity = 9/17 (52.94%), Postives = 16/17 (94.12%), Query Frame = 0 Query: 15 LESYCYNLKSTVEKDEL 31 LESYC+N+K+T+E +++ Sbjct: 695 LESYCFNMKTTIEDEKV 745
BLAST of EMLSAG00000001096 vs. C. finmarchicus
Match: gi|592886236|gb|GAXK01072139.1| (TSA: Calanus finmarchicus comp3833317_c0_seq1 transcribed RNA sequence) HSP 1 Score: 27.335 bits (59), Expect = 6.569e+0 Identity = 13/43 (30.23%), Postives = 25/43 (58.14%), Query Frame = 0 Query: 15 LESYCYNLKSTVEKDELRGKLSQEDKETVKDNI-STVKHVGGN 56 LE+Y YN+K+ + ++ + K + +KE ++ + VK V N Sbjct: 250 LENYAYNIKNALNDEKFKDKFKEGEKENIEKAVEEAVKWVEAN 378
BLAST of EMLSAG00000001096 vs. L. salmonis peptides
Match: EMLSAP00000001096 (pep:novel supercontig:LSalAtl2s:LSalAtl2s117:833403:833977:-1 gene:EMLSAG00000001096 transcript:EMLSAT00000001096 description:"snap-LSalAtl2s117-processed-gene-8.13") HSP 1 Score: 187.963 bits (476), Expect = 6.230e-63 Identity = 90/90 (100.00%), Postives = 90/90 (100.00%), Query Frame = 0 Query: 1 MLKSTREGRKTNRNLESYCYNLKSTVEKDELRGKLSQEDKETVKDNISTVKHVGGNIIFWGCLPTKRKDNSSGSKGTEMCIVMDSPAPYF 90 MLKSTREGRKTNRNLESYCYNLKSTVEKDELRGKLSQEDKETVKDNISTVKHVGGNIIFWGCLPTKRKDNSSGSKGTEMCIVMDSPAPYF Sbjct: 1 MLKSTREGRKTNRNLESYCYNLKSTVEKDELRGKLSQEDKETVKDNISTVKHVGGNIIFWGCLPTKRKDNSSGSKGTEMCIVMDSPAPYF 90
BLAST of EMLSAG00000001096 vs. L. salmonis peptides
Match: EMLSAP00000011625 (pep:novel supercontig:LSalAtl2s:LSalAtl2s805:197005:264411:-1 gene:EMLSAG00000011625 transcript:EMLSAT00000011625 description:"maker-LSalAtl2s805-augustus-gene-2.13") HSP 1 Score: 56.225 bits (134), Expect = 1.583e-10 Identity = 26/30 (86.67%), Postives = 28/30 (93.33%), Query Frame = 0 Query: 15 LESYCYNLKSTVEKDELRGKLSQEDKETVK 44 LESYC+NLKSTVEKDE +GKLSQED ETVK Sbjct: 94 LESYCFNLKSTVEKDEFKGKLSQEDIETVK 123 The following BLAST results are available for this feature:
BLAST of EMLSAG00000001096 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO) Total hits: 25
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BLAST of EMLSAG00000001096 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA) Total hits: 17
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BLAST of EMLSAG00000001096 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self) Total hits: 2
BLAST of EMLSAG00000001096 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt) Total hits: 0
BLAST of EMLSAG00000001096 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods) Total hits: 0
BLAST of EMLSAG00000001096 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017)) Total hits: 0
BLAST of EMLSAG00000001096 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins) Total hits: 0
Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Cross References
External references for this gene
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at LSalAtl2s117:833403..833977- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>EMLSAG00000001096-683862 ID=EMLSAG00000001096-683862|Name=EMLSAG00000001096|organism=Lepeophtheirus salmonis|type=gene|length=575bp|location=Sequence derived from alignment at LSalAtl2s117:833403..833977- (Lepeophtheirus salmonis)back to top Add to Basket
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