EMLSAG00000001096, EMLSAG00000001096-683862 (gene) Lepeophtheirus salmonis

Overview
NameEMLSAG00000001096
Unique NameEMLSAG00000001096-683862
Typegene
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Homology
[Close]
BLAST of EMLSAG00000001096 vs. GO
Match: - (symbol:Hspa2 "heat shock protein 2" species:10090 "Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0000795 "synaptonemal complex" evidence=IDA] [GO:0001673 "male germ cell nucleus" evidence=IDA] [GO:0001934 "positive regulation of protein phosphorylation" evidence=IMP] [GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IDA] [GO:0006950 "response to stress" evidence=IEA] [GO:0007140 "male meiosis" evidence=IMP] [GO:0007141 "male meiosis I" evidence=IMP] [GO:0007286 "spermatid development" evidence=IMP] [GO:0009986 "cell surface" evidence=IDA] [GO:0031662 "positive regulation of cyclin-dependent protein serine/threonine kinase activity involved in G2/M transition of mitotic cell cycle" evidence=IMP] [GO:0036128 "CatSper complex" evidence=IDA] [GO:0051861 "glycolipid binding" evidence=IDA] [GO:0070062 "extracellular vesicular exosome" evidence=ISO] [GO:0070194 "synaptonemal complex disassembly" evidence=IMP] [GO:0072562 "blood microparticle" evidence=ISO] Pfam:PF00012 Prosite:PS01036 MGI:MGI:96243 GO:GO:0005739 GO:GO:0005524 GO:GO:0006950 GO:GO:0005654 GO:GO:0009986 GO:GO:0007286 Reactome:REACT_188804 Reactome:REACT_198624 Reactome:REACT_75800 GO:GO:0001673 eggNOG:COG0443 InterPro:IPR013126 PRINTS:PR00301 InterPro:IPR018181 PROSITE:PS00297 PROSITE:PS00329 GO:GO:0007141 GO:GO:0051861 GO:GO:0070194 GO:GO:0036128 HOGENOM:HOG000228135 GO:GO:0000795 EMBL:CH466526 HOVERGEN:HBG051845 GeneTree:ENSGT00740000115252 KO:K03283 OrthoDB:EOG7PCJGF TreeFam:TF105042 CTD:3306 OMA:RDIAGNK GO:GO:0031662 EMBL:M20567 EMBL:BC004714 EMBL:BC052350 PIR:S10859 RefSeq:NP_001002012.1 RefSeq:NP_032327.2 RefSeq:XP_006515547.1 UniGene:Mm.296181 ProteinModelPortal:P17156 SMR:P17156 BioGrid:200453 DIP:DIP-42071N IntAct:P17156 MINT:MINT-1207820 STRING:10090.ENSMUSP00000079306 PhosphoSite:P17156 REPRODUCTION-2DPAGE:IPI00331546 REPRODUCTION-2DPAGE:P17156 UCD-2DPAGE:P17156 PaxDb:P17156 PRIDE:P17156 Ensembl:ENSMUST00000080449 GeneID:15512 KEGG:mmu:15512 UCSC:uc007nyf.1 InParanoid:Q99KD7 NextBio:288426 PRO:PR:P17156 Bgee:P17156 CleanEx:MM_HSPA2 Genevestigator:P17156 Uniprot:P17156)

HSP 1 Score: 41.9726 bits (97), Expect = 3.367e-4
Identity = 19/48 (39.58%), Postives = 30/48 (62.50%), Query Frame = 0 
Query:    3 KSTREGRKTNRNLESYCYNLKSTVEKDELRGKLSQEDKETVKDNISTV 50
            ++ R+       +ESY YN+K TVE ++LRGK+S++DK  + D    V
Sbjct:  533 EANRDRVAAKNAVESYTYNIKQTVEDEKLRGKISEQDKNKILDKCQEV 580
[Close]
BLAST of EMLSAG00000001096 vs. GO
Match: - (symbol:HSPA2 "Uncharacterized protein" species:9615 "Canis lupus familiaris" [GO:0000795 "synaptonemal complex" evidence=IEA] [GO:0001673 "male germ cell nucleus" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0007141 "male meiosis I" evidence=IEA] [GO:0007286 "spermatid development" evidence=IEA] [GO:0009986 "cell surface" evidence=IEA] [GO:0031662 "positive regulation of cyclin-dependent protein serine/threonine kinase activity involved in G2/M transition of mitotic cell cycle" evidence=IEA] [GO:0036128 "CatSper complex" evidence=IEA] [GO:0051861 "glycolipid binding" evidence=IEA] [GO:0070194 "synaptonemal complex disassembly" evidence=IEA] Pfam:PF00012 Prosite:PS01036 GO:GO:0005739 GO:GO:0005524 GO:GO:0009986 GO:GO:0007286 GO:GO:0001673 InterPro:IPR013126 PRINTS:PR00301 InterPro:IPR018181 PROSITE:PS00297 PROSITE:PS00329 GO:GO:0007141 GO:GO:0051861 GO:GO:0070194 GO:GO:0036128 GO:GO:0000795 GeneTree:ENSGT00740000115252 KO:K03283 OrthoDB:EOG7PCJGF TreeFam:TF105042 CTD:3306 OMA:RDIAGNK GO:GO:0031662 EMBL:AAEX03005781 RefSeq:XP_537479.1 ProteinModelPortal:E2QX84 Ensembl:ENSCAFT00000025433 GeneID:480355 KEGG:cfa:480355 NextBio:20855385 Uniprot:E2QX84)

HSP 1 Score: 41.9726 bits (97), Expect = 3.373e-4
Identity = 19/48 (39.58%), Postives = 30/48 (62.50%), Query Frame = 0 
Query:    3 KSTREGRKTNRNLESYCYNLKSTVEKDELRGKLSQEDKETVKDNISTV 50
            ++ R+       +ESY YN+K TVE ++LRGK+S++DK  + D    V
Sbjct:  533 EANRDRVAAKNAVESYTYNIKQTVEDEKLRGKISEQDKNKILDKCQEV 580
[Close]
BLAST of EMLSAG00000001096 vs. GO
Match: - (symbol:HSP70 "Heat shock protein Hsp70" species:9031 "Gallus gallus" [GO:0000795 "synaptonemal complex" evidence=IEA] [GO:0001673 "male germ cell nucleus" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0007141 "male meiosis I" evidence=IEA] [GO:0007286 "spermatid development" evidence=IEA] [GO:0009408 "response to heat" evidence=IDA] [GO:0009986 "cell surface" evidence=IEA] [GO:0031662 "positive regulation of cyclin-dependent protein serine/threonine kinase activity involved in G2/M transition of mitotic cell cycle" evidence=IEA] [GO:0036128 "CatSper complex" evidence=IEA] [GO:0051861 "glycolipid binding" evidence=IEA] [GO:0070194 "synaptonemal complex disassembly" evidence=IEA] Pfam:PF00012 Prosite:PS01036 GO:GO:0005739 GO:GO:0005524 GO:GO:0009986 GO:GO:0007286 GO:GO:0009408 GO:GO:0001673 InterPro:IPR013126 PRINTS:PR00301 InterPro:IPR018181 PROSITE:PS00297 PROSITE:PS00329 GO:GO:0007141 GO:GO:0051861 GO:GO:0070194 GO:GO:0036128 GO:GO:0000795 HOVERGEN:HBG051845 GeneTree:ENSGT00740000115252 OrthoDB:EOG7PCJGF TreeFam:TF105042 UniGene:Gga.4942 OMA:RDIAGNK GO:GO:0031662 EMBL:AADN03004712 EMBL:AY143691 EMBL:AY143692 EMBL:AY143693 EMBL:AY288298 EMBL:AY288299 EMBL:AY288300 EMBL:AY288301 EMBL:AY288302 EMBL:AY288303 EMBL:JX827254 ProteinModelPortal:Q7SX63 SMR:Q7SX63 Ensembl:ENSGALT00000019144 InParanoid:Q7SX63 PRO:PR:Q7SX63 ArrayExpress:Q7SX63 Uniprot:Q7SX63)

HSP 1 Score: 41.9726 bits (97), Expect = 3.619e-4
Identity = 18/32 (56.25%), Postives = 26/32 (81.25%), Query Frame = 0 
Query:   14 NLESYCYNLKSTVEKDELRGKLSQEDKETVKD 45
            +LESY YN+K TVE ++L+GK+S +DK+ V D
Sbjct:  544 SLESYTYNMKQTVEDEKLKGKISDQDKQKVLD 575
[Close]
BLAST of EMLSAG00000001096 vs. GO
Match: - (symbol:si:ch211-199o1.2 "si:ch211-199o1.2" species:7955 "Danio rerio" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] Pfam:PF00012 Prosite:PS01036 ZFIN:ZDB-GENE-060503-867 GO:GO:0005524 InterPro:IPR013126 PRINTS:PR00301 InterPro:IPR018181 PROSITE:PS00297 PROSITE:PS00329 GeneTree:ENSGT00740000115252 TreeFam:TF105042 OMA:TIEWIEG EMBL:BX470135 PRIDE:F1RCH9 Ensembl:ENSDART00000025319 ArrayExpress:F1RCH9 Bgee:F1RCH9 Uniprot:F1RCH9)

HSP 1 Score: 41.9726 bits (97), Expect = 3.630e-4
Identity = 19/45 (42.22%), Postives = 30/45 (66.67%), Query Frame = 0 
Query:    6 REGRKTNRNLESYCYNLKSTVEKDELRGKLSQEDKETVKDNISTV 50
            RE       LESY +++K+TVE + LRGK+S++DK+ + D  + V
Sbjct:  535 REKIAAKNALESYAFSMKNTVEDENLRGKISEQDKKKIIDKCTEV 579
[Close]
BLAST of EMLSAG00000001096 vs. GO
Match: - (symbol:LOC607182 "Uncharacterized protein" species:9615 "Canis lupus familiaris" [GO:0000974 "Prp19 complex" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0030529 "ribonucleoprotein complex" evidence=IEA] [GO:0042623 "ATPase activity, coupled" evidence=IEA] [GO:0045892 "negative regulation of transcription, DNA-templated" evidence=IEA] [GO:0051082 "unfolded protein binding" evidence=IEA] [GO:0051085 "chaperone mediated protein folding requiring cofactor" evidence=IEA] [GO:0051726 "regulation of cell cycle" evidence=IEA] [GO:0070062 "extracellular vesicular exosome" evidence=IEA] Pfam:PF00012 Prosite:PS01036 GO:GO:0005524 InterPro:IPR013126 PRINTS:PR00301 InterPro:IPR018181 PROSITE:PS00297 GeneTree:ENSGT00740000115252 KO:K03283 OrthoDB:EOG7PCJGF TreeFam:TF105042 RefSeq:XP_005642325.1 Ensembl:ENSCAFT00000002983 GeneID:607182 OMA:DANDILN Uniprot:H9GW49)

HSP 1 Score: 41.5874 bits (96), Expect = 4.125e-4
Identity = 17/45 (37.78%), Postives = 32/45 (71.11%), Query Frame = 0 
Query:    6 REGRKTNRNLESYCYNLKSTVEKDELRGKLSQEDKETVKDNISTV 50
            R+   +  +LESY +N+K+TVE ++L+GK++ EDK+ + D  + +
Sbjct:  533 RDKVSSKNSLESYAFNMKATVEDEKLQGKINDEDKQKILDKCNEI 577
[Close]
BLAST of EMLSAG00000001096 vs. GO
Match: - (symbol:LOC680121 "Heat shock cognate 71 kDa protein" species:10116 "Rattus norvegicus" [GO:0005524 "ATP binding" evidence=IEA] Pfam:PF00012 Prosite:PS01036 RGD:1595502 GO:GO:0005524 InterPro:IPR013126 PRINTS:PR00301 InterPro:IPR018181 PROSITE:PS00297 PROSITE:PS00329 GeneTree:ENSGT00740000115252 KO:K03283 OrthoDB:EOG7PCJGF TreeFam:TF105042 OMA:PMIVVEY EMBL:AABR06067111 RefSeq:XP_001055808.1 PRIDE:F1LZI1 Ensembl:ENSRNOT00000013159 GeneID:680121 KEGG:rno:680121 NextBio:35579500 Uniprot:F1LZI1)

HSP 1 Score: 41.5874 bits (96), Expect = 4.162e-4
Identity = 17/45 (37.78%), Postives = 32/45 (71.11%), Query Frame = 0 
Query:    6 REGRKTNRNLESYCYNLKSTVEKDELRGKLSQEDKETVKDNISTV 50
            R+   +  +LESY +N+K+TVE ++L+GK++ EDK+ + D  + +
Sbjct:  533 RDKVSSKNSLESYAFNMKATVEDEKLQGKINDEDKQKILDKCNEI 577
[Close]
BLAST of EMLSAG00000001096 vs. GO
Match: - (symbol:LOC680121 "similar to heat shock protein 8" species:10116 "Rattus norvegicus" [GO:0005524 "ATP binding" evidence=IEA] Pfam:PF00012 Prosite:PS01036 RGD:1595502 GO:GO:0005524 InterPro:IPR013126 PRINTS:PR00301 InterPro:IPR018181 PROSITE:PS00297 PROSITE:PS00329 GeneTree:ENSGT00740000115252 KO:K03283 OrthoDB:EOG7PCJGF TreeFam:TF105042 OMA:PMIVVEY EMBL:AABR06067111 RefSeq:XP_001055808.1 PRIDE:F1LZI1 Ensembl:ENSRNOT00000013159 GeneID:680121 KEGG:rno:680121 NextBio:35579500 Uniprot:F1LZI1)

HSP 1 Score: 41.5874 bits (96), Expect = 4.162e-4
Identity = 17/45 (37.78%), Postives = 32/45 (71.11%), Query Frame = 0 
Query:    6 REGRKTNRNLESYCYNLKSTVEKDELRGKLSQEDKETVKDNISTV 50
            R+   +  +LESY +N+K+TVE ++L+GK++ EDK+ + D  + +
Sbjct:  533 RDKVSSKNSLESYAFNMKATVEDEKLQGKINDEDKQKILDKCNEI 577
[Close]
BLAST of EMLSAG00000001096 vs. GO
Match: - (symbol:HSPA8 "Heat shock cognate 71 kDa protein" species:9601 "Pongo abelii" [GO:0000974 "Prp19 complex" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0005730 "nucleolus" evidence=ISS] [GO:0030529 "ribonucleoprotein complex" evidence=ISS] [GO:0045892 "negative regulation of transcription, DNA-templated" evidence=ISS] Pfam:PF00012 Prosite:PS01036 GO:GO:0005524 GO:GO:0006950 GO:GO:0042470 GO:GO:0045892 GO:GO:0005730 GO:GO:0008380 GO:GO:0006397 GO:GO:0005681 GO:GO:0030529 InterPro:IPR013126 PRINTS:PR00301 InterPro:IPR018181 PROSITE:PS00297 PROSITE:PS00329 GO:GO:0000974 HOVERGEN:HBG051845 EMBL:CR861166 EMBL:CR925990 ProteinModelPortal:Q5NVM9 SMR:Q5NVM9 PRIDE:Q5NVM9 InParanoid:Q5NVM9 Uniprot:Q5NVM9)

HSP 1 Score: 41.5874 bits (96), Expect = 4.162e-4
Identity = 17/45 (37.78%), Postives = 32/45 (71.11%), Query Frame = 0 
Query:    6 REGRKTNRNLESYCYNLKSTVEKDELRGKLSQEDKETVKDNISTV 50
            R+   +  +LESY +N+K+TVE ++L+GK++ EDK+ + D  + +
Sbjct:  533 RDKVSSKNSLESYAFNMKATVEDEKLQGKINDEDKQKILDKCNEI 577
[Close]
BLAST of EMLSAG00000001096 vs. GO
Match: - (symbol:HSPA8 "Heat shock cognate 71 kDa protein" species:10029 "Cricetulus griseus" [GO:0000974 "Prp19 complex" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0005730 "nucleolus" evidence=ISS] [GO:0030529 "ribonucleoprotein complex" evidence=ISS] [GO:0045892 "negative regulation of transcription, DNA-templated" evidence=ISS] Pfam:PF00012 Prosite:PS01036 GO:GO:0005524 GO:GO:0006950 GO:GO:0042470 GO:GO:0045892 GO:GO:0005730 GO:GO:0008380 GO:GO:0006397 GO:GO:0006351 GO:GO:0005681 GO:GO:0030529 InterPro:IPR013126 PRINTS:PR00301 InterPro:IPR018181 PROSITE:PS00297 PROSITE:PS00329 GO:GO:0000974 HOVERGEN:HBG051845 KO:K03283 CTD:3312 EMBL:M34561 PIR:A35922 RefSeq:NP_001233658.1 ProteinModelPortal:P19378 SMR:P19378 IntAct:P19378 PRIDE:P19378 GeneID:100689472 KEGG:cge:100689472 PRO:PR:P19378 Uniprot:P19378)

HSP 1 Score: 41.5874 bits (96), Expect = 4.237e-4
Identity = 17/45 (37.78%), Postives = 32/45 (71.11%), Query Frame = 0 
Query:    6 REGRKTNRNLESYCYNLKSTVEKDELRGKLSQEDKETVKDNISTV 50
            R+   +  +LESY +N+K+TVE ++L+GK++ EDK+ + D  + +
Sbjct:  533 RDKVSSKNSLESYAFNMKATVEDEKLQGKINDEDKQKILDKCNEI 577
[Close]
BLAST of EMLSAG00000001096 vs. GO
Match: - (symbol:Hspa8 "Heat shock cognate 71 kDa protein" species:10116 "Rattus norvegicus" [GO:0000974 "Prp19 complex" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0005681 "spliceosomal complex" evidence=IEA] [GO:0005730 "nucleolus" evidence=ISS] [GO:0006200 "ATP catabolic process" evidence=IDA] [GO:0006351 "transcription, DNA-templated" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA] [GO:0006950 "response to stress" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0030529 "ribonucleoprotein complex" evidence=ISS] [GO:0042470 "melanosome" evidence=IEA] [GO:0045892 "negative regulation of transcription, DNA-templated" evidence=ISS] Pfam:PF00012 Prosite:PS01036 RGD:621725 GO:GO:0005524 GO:GO:0006950 GO:GO:0070062 GO:GO:0042470 GO:GO:0045892 GO:GO:0005730 GO:GO:0008380 GO:GO:0043025 GO:GO:0043005 GO:GO:0008021 GO:GO:0051082 GO:GO:0006397 GO:GO:0043531 GO:GO:0006351 GO:GO:0005681 GO:GO:0030529 PDB:1Q2G PDBsum:1Q2G GO:GO:0042623 eggNOG:COG0443 InterPro:IPR013126 PRINTS:PR00301 InterPro:IPR018181 PROSITE:PS00297 PROSITE:PS00329 GO:GO:0000974 GO:GO:0051085 HOVERGEN:HBG051845 KO:K03283 CTD:3312 NextBio:288328 EMBL:Y00054 EMBL:M11942 EMBL:BC061547 EMBL:BC098914 PIR:S07197 RefSeq:NP_077327.1 UniGene:Rn.120392 UniGene:Rn.129299 UniGene:Rn.201298 PDB:1CKR PDB:1UD0 PDB:2V7Z PDB:7HSC PDBsum:1CKR PDBsum:1UD0 PDBsum:2V7Z PDBsum:7HSC ProteinModelPortal:P63018 SMR:P63018 BioGrid:246629 DIP:DIP-33262N IntAct:P63018 MINT:MINT-2514077 PhosphoSite:P63018 World-2DPAGE:0004:P63018 PaxDb:P63018 PRIDE:P63018 GeneID:24468 KEGG:rno:24468 UCSC:RGD:621725 EvolutionaryTrace:P63018 PRO:PR:P63018 Genevestigator:P63018 Uniprot:P63018)

HSP 1 Score: 41.5874 bits (96), Expect = 4.353e-4
Identity = 17/45 (37.78%), Postives = 32/45 (71.11%), Query Frame = 0 
Query:    6 REGRKTNRNLESYCYNLKSTVEKDELRGKLSQEDKETVKDNISTV 50
            R+   +  +LESY +N+K+TVE ++L+GK++ EDK+ + D  + +
Sbjct:  533 RDKVSSKNSLESYAFNMKATVEDEKLQGKINDEDKQKILDKCNEI 577
[Close]
BLAST of EMLSAG00000001096 vs. C. finmarchicus
Match: gi|592938432|gb|GAXK01020121.1| (TSA: Calanus finmarchicus comp13797_c0_seq2 transcribed RNA sequence)

HSP 1 Score: 43.5134 bits (101), Expect = 2.083e-5
Identity = 17/32 (53.12%), Postives = 26/32 (81.25%), Query Frame = 0 
Query:   14 NLESYCYNLKSTVEKDELRGKLSQEDKETVKD 45
            NLESYC+N+KST+E +  RGK+S+ D++ + D
Sbjct:  335 NLESYCFNMKSTLEDENARGKISEPDRKVITD 430
[Close]
BLAST of EMLSAG00000001096 vs. C. finmarchicus
Match: gi|592938433|gb|GAXK01020120.1| (TSA: Calanus finmarchicus comp13797_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 43.5134 bits (101), Expect = 2.108e-5
Identity = 17/32 (53.12%), Postives = 26/32 (81.25%), Query Frame = 0 
Query:   14 NLESYCYNLKSTVEKDELRGKLSQEDKETVKD 45
            NLESYC+N+KST+E +  RGK+S+ D++ + D
Sbjct:  347 NLESYCFNMKSTLEDENARGKISEPDRKVITD 442
[Close]
BLAST of EMLSAG00000001096 vs. C. finmarchicus
Match: gi|592935542|gb|GAXK01023011.1| (TSA: Calanus finmarchicus comp4952551_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 40.0466 bits (92), Expect = 7.369e-5
Identity = 19/43 (44.19%), Postives = 29/43 (67.44%), Query Frame = 0 
Query:   10 KTNRNLESYCYNLKSTVEKDELRGKLSQEDKETVKDNISTVKH 52
            K    LE Y YN+K+  E ++L+GKLS EDK+T+ D ++ V+ 
Sbjct:  100 KAKNGLEGYVYNIKNQCEDEKLKGKLSDEDKKTLLDKVNEVQE 228
[Close]
BLAST of EMLSAG00000001096 vs. C. finmarchicus
Match: gi|592857919|gb|GAXK01099643.1| (TSA: Calanus finmarchicus comp2341041_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 36.965 bits (84), Expect = 1.450e-3
Identity = 20/44 (45.45%), Postives = 32/44 (72.73%), Query Frame = 0 
Query:   15 LESYCYNLKSTVEKDE-LRGKLSQEDKETVKDNI-STVKHVGGN 56
            LESY YN+K+T+  +E ++ KL+ EDKET++D + ST + +  N
Sbjct:  135 LESYIYNIKNTINDEEKIKDKLTDEDKETLEDLVKSTTEWIDEN 266
[Close]
BLAST of EMLSAG00000001096 vs. C. finmarchicus
Match: gi|592931672|gb|GAXK01026881.1| (TSA: Calanus finmarchicus comp18245_c1_seq3 transcribed RNA sequence)

HSP 1 Score: 35.8094 bits (81), Expect = 8.449e-3
Identity = 12/25 (48.00%), Postives = 23/25 (92.00%), Query Frame = 0 
Query:   15 LESYCYNLKSTVEKDELRGKLSQED 39
            LESYC+N+K+T+E ++++ K+S++D
Sbjct:  383 LESYCFNMKTTIEDEKVKDKISEDD 457
[Close]
BLAST of EMLSAG00000001096 vs. C. finmarchicus
Match: gi|592931673|gb|GAXK01026880.1| (TSA: Calanus finmarchicus comp18245_c1_seq2 transcribed RNA sequence)

HSP 1 Score: 35.8094 bits (81), Expect = 1.239e-2
Identity = 12/25 (48.00%), Postives = 23/25 (92.00%), Query Frame = 0 
Query:   15 LESYCYNLKSTVEKDELRGKLSQED 39
            LESYC+N+K+T+E ++++ K+S++D
Sbjct:  383 LESYCFNMKTTIEDEKVKDKISEDD 457
[Close]
BLAST of EMLSAG00000001096 vs. C. finmarchicus
Match: gi|592931674|gb|GAXK01026879.1| (TSA: Calanus finmarchicus comp18245_c1_seq1 transcribed RNA sequence)

HSP 1 Score: 35.8094 bits (81), Expect = 1.240e-2
Identity = 12/25 (48.00%), Postives = 23/25 (92.00%), Query Frame = 0 
Query:   15 LESYCYNLKSTVEKDELRGKLSQED 39
            LESYC+N+K+T+E ++++ K+S++D
Sbjct:  383 LESYCFNMKTTIEDEKVKDKISEDD 457
[Close]
BLAST of EMLSAG00000001096 vs. C. finmarchicus
Match: gi|592785895|gb|GAXK01168673.1| (TSA: Calanus finmarchicus comp613_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 33.8834 bits (76), Expect = 2.799e-2
Identity = 12/31 (38.71%), Postives = 26/31 (83.87%), Query Frame = 0 
Query:   15 LESYCYNLKSTVEKDELRGKLSQEDKETVKD 45
            LESYC+N+K+T++ ++++ K+S++D + + D
Sbjct:  116 LESYCFNMKTTLDDEKVKDKISEDDMKKITD 208
[Close]
BLAST of EMLSAG00000001096 vs. C. finmarchicus
Match: gi|592899057|gb|GAXK01059318.1| (TSA: Calanus finmarchicus comp6746799_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 32.7278 bits (73), Expect = 5.321e-2
Identity = 15/34 (44.12%), Postives = 24/34 (70.59%), Query Frame = 0 
Query:   14 NLESYCYNLKSTVEKDELRGKLSQEDKETVKDNI 47
            +LE+Y Y+LK+T+  D++ GKL + DK T+   I
Sbjct:  203 SLENYAYSLKNTMSDDKVAGKLEESDKTTLSAKI 304
[Close]
BLAST of EMLSAG00000001096 vs. C. finmarchicus
Match: gi|592863834|gb|GAXK01093728.1| (TSA: Calanus finmarchicus comp6985163_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 32.3426 bits (72), Expect = 6.939e-2
Identity = 20/50 (40.00%), Postives = 29/50 (58.00%), Query Frame = 0 
Query:    3 KSTREGRKTNRNLESYCYNLKSTVEKDE--LRGKLSQEDKETVKDNISTV 50
            K  +E       LESY YNLK+T++ DE  +  KLS +DKE ++  I+  
Sbjct:  228 KKVKERIDARNGLESYLYNLKNTLDDDEKGVADKLSADDKEEMESMINEA 377
[Close]
BLAST of EMLSAG00000001096 vs. L. salmonis peptides
Match: EMLSAP00000001096 (pep:novel supercontig:LSalAtl2s:LSalAtl2s117:833403:833977:-1 gene:EMLSAG00000001096 transcript:EMLSAT00000001096 description:"snap-LSalAtl2s117-processed-gene-8.13")

HSP 1 Score: 187.963 bits (476), Expect = 6.230e-63
Identity = 90/90 (100.00%), Postives = 90/90 (100.00%), Query Frame = 0 
Query:    1 MLKSTREGRKTNRNLESYCYNLKSTVEKDELRGKLSQEDKETVKDNISTVKHVGGNIIFWGCLPTKRKDNSSGSKGTEMCIVMDSPAPYF 90
            MLKSTREGRKTNRNLESYCYNLKSTVEKDELRGKLSQEDKETVKDNISTVKHVGGNIIFWGCLPTKRKDNSSGSKGTEMCIVMDSPAPYF
Sbjct:    1 MLKSTREGRKTNRNLESYCYNLKSTVEKDELRGKLSQEDKETVKDNISTVKHVGGNIIFWGCLPTKRKDNSSGSKGTEMCIVMDSPAPYF 90
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BLAST of EMLSAG00000001096 vs. L. salmonis peptides
Match: EMLSAP00000011625 (pep:novel supercontig:LSalAtl2s:LSalAtl2s805:197005:264411:-1 gene:EMLSAG00000011625 transcript:EMLSAT00000011625 description:"maker-LSalAtl2s805-augustus-gene-2.13")

HSP 1 Score: 56.225 bits (134), Expect = 1.583e-10
Identity = 26/30 (86.67%), Postives = 28/30 (93.33%), Query Frame = 0 
Query:   15 LESYCYNLKSTVEKDELRGKLSQEDKETVK 44
            LESYC+NLKSTVEKDE +GKLSQED ETVK
Sbjct:   94 LESYCFNLKSTVEKDEFKGKLSQEDIETVK 123
The following BLAST results are available for this feature:
BLAST of EMLSAG00000001096 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO)
Total hits: 25
Match NameE-valueIdentityDescription
-3.367e-439.58symbol:Hspa2 "heat shock protein 2" species:10090 ... [more]
-3.373e-439.58symbol:HSPA2 "Uncharacterized protein" species:961... [more]
-3.619e-456.25symbol:HSP70 "Heat shock protein Hsp70" species:90... [more]
-3.630e-442.22symbol:si:ch211-199o1.2 "si:ch211-199o1.2" species... [more]
-4.125e-437.78symbol:LOC607182 "Uncharacterized protein" species... [more]
-4.162e-437.78symbol:LOC680121 "Heat shock cognate 71 kDa protei... [more]
-4.162e-437.78symbol:LOC680121 "similar to heat shock protein 8"... [more]
-4.162e-437.78symbol:HSPA8 "Heat shock cognate 71 kDa protein" s... [more]
-4.237e-437.78symbol:HSPA8 "Heat shock cognate 71 kDa protein" s... [more]
-4.353e-437.78symbol:Hspa8 "Heat shock cognate 71 kDa protein" s... [more]

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BLAST of EMLSAG00000001096 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA)
Total hits: 17
Match NameE-valueIdentityDescription
gi|592938432|gb|GAXK01020121.1|2.083e-553.13TSA: Calanus finmarchicus comp13797_c0_seq2 transc... [more]
gi|592938433|gb|GAXK01020120.1|2.108e-553.13TSA: Calanus finmarchicus comp13797_c0_seq1 transc... [more]
gi|592935542|gb|GAXK01023011.1|7.369e-544.19TSA: Calanus finmarchicus comp4952551_c0_seq1 tran... [more]
gi|592857919|gb|GAXK01099643.1|1.450e-345.45TSA: Calanus finmarchicus comp2341041_c0_seq1 tran... [more]
gi|592931672|gb|GAXK01026881.1|8.449e-348.00TSA: Calanus finmarchicus comp18245_c1_seq3 transc... [more]
gi|592931673|gb|GAXK01026880.1|1.239e-248.00TSA: Calanus finmarchicus comp18245_c1_seq2 transc... [more]
gi|592931674|gb|GAXK01026879.1|1.240e-248.00TSA: Calanus finmarchicus comp18245_c1_seq1 transc... [more]
gi|592785895|gb|GAXK01168673.1|2.799e-238.71TSA: Calanus finmarchicus comp613_c0_seq1 transcri... [more]
gi|592899057|gb|GAXK01059318.1|5.321e-244.12TSA: Calanus finmarchicus comp6746799_c0_seq1 tran... [more]
gi|592863834|gb|GAXK01093728.1|6.939e-240.00TSA: Calanus finmarchicus comp6985163_c0_seq1 tran... [more]

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BLAST of EMLSAG00000001096 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self)
Total hits: 2
Match NameE-valueIdentityDescription
EMLSAP000000010966.230e-63100.00pep:novel supercontig:LSalAtl2s:LSalAtl2s117:83340... [more]
EMLSAP000000116251.583e-1086.67pep:novel supercontig:LSalAtl2s:LSalAtl2s805:19700... [more]
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BLAST of EMLSAG00000001096 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000001096 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000001096 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017))
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000001096 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s117supercontigLSalAtl2s117:833403..833977 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Blast vs. GO2014-04-02
TblastN vs C. finmarchicus TSA2014-05-09
Blastp vs. self2014-05-10
Blastp vs. SwissProt2017-02-10
Blastp vs. Selected Arthropods2017-02-20
Blastp vs. NR (2/2017)2017-02-20
Blastp vs. Tigriopus kingsejongensis proteins2018-04-18
Properties
Property NameValue
Logic nameensemblgenomes
Descriptionsnap-LSalAtl2s117-processed-gene-8.13
Biotypeprotein_coding
EvidenceIEA
NoteHypothetical protein
Cross References
External references for this gene
DatabaseAccession
Ensembl Metazoa (gene)EMLSAG00000001096 (primary cross-reference)
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
EMLSAT00000001096EMLSAT00000001096-696943Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at LSalAtl2s117:833403..833977-

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAG00000001096-683862 ID=EMLSAG00000001096-683862|Name=EMLSAG00000001096|organism=Lepeophtheirus salmonis|type=gene|length=575bp|location=Sequence derived from alignment at LSalAtl2s117:833403..833977- (Lepeophtheirus salmonis)
ATGCTGAAGAGCACAAGGGAAGGGCGGAAAACAAACAGAAATCTTGAGTC
TTATTGCTACAACTTGAAGTCAACAGTGGAAAAGGATGAGTTGAGGGGAA
AGCTATCTCAAGAGGATAAAGAGACAGTCAAGGACAAGTGTGAAGAGACT
ATCAAATGGATGGATACTTAATCAAACTGCAGTAAAGAATGAATAGTTAT
ACAAAAAAAAGTTGAGGCTTTAAGGAATCCCTTATTTTTGTTCCTCCAAA
CACTTTTTTATTCAGTCCATAAAATGTTTTTTACTCTTAAAATAAACTTA
GTATTTAAATTATAGCCCGCTCTTTTCTTTGTCCTTGGGTAATGTTACAA
AATTACGAAGGGTTCAAATAATTATTTTTTCCACAGTAGGTGCTCCATTA
GTTTTAATTGTTTATCGATTAATAATCTATGTTTGATAGCATCTCCACTG
TCAAGCATGTGGGAGGAAACATTATCTTTTGGGGATGTCTTCCAACTAAA
AGAAAGGACAACTCATCTGGATCAAAGGGCACTGAAATGTGTATCGTAAT
GGATTCTCCAGCTCCATACTTCTGA
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