EMLSAG00000001096, EMLSAG00000001096-683862 (gene) Lepeophtheirus salmonis

Overview
NameEMLSAG00000001096
Unique NameEMLSAG00000001096-683862
Typegene
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Homology
[Close]
BLAST of EMLSAG00000001096 vs. GO
Match: - (symbol:Hspa8 "heat shock 70kDa protein 8" species:10116 "Rattus norvegicus" [GO:0000974 "Prp19 complex" evidence=ISO;ISS] [GO:0005102 "receptor binding" evidence=IPI] [GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA;IDA] [GO:0005622 "intracellular" evidence=ISO] [GO:0005634 "nucleus" evidence=ISO;ISS] [GO:0005681 "spliceosomal complex" evidence=IEA] [GO:0005730 "nucleolus" evidence=ISO;ISS] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005829 "cytosol" evidence=ISO] [GO:0006200 "ATP catabolic process" evidence=ISO;IDA] [GO:0006351 "transcription, DNA-templated" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA] [GO:0006457 "protein folding" evidence=ISO] [GO:0006950 "response to stress" evidence=IEA] [GO:0008021 "synaptic vesicle" evidence=IDA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0023026 "MHC class II protein complex binding" evidence=ISO] [GO:0030529 "ribonucleoprotein complex" evidence=ISO;ISS] [GO:0042470 "melanosome" evidence=IEA] [GO:0042623 "ATPase activity, coupled" evidence=ISO;IDA] [GO:0043005 "neuron projection" evidence=IDA] [GO:0043025 "neuronal cell body" evidence=IDA] [GO:0043234 "protein complex" evidence=IDA] [GO:0043531 "ADP binding" evidence=IDA] [GO:0044822 "poly(A) RNA binding" evidence=ISO] [GO:0045892 "negative regulation of transcription, DNA-templated" evidence=ISO;ISS] [GO:0051082 "unfolded protein binding" evidence=ISO;IMP] [GO:0051085 "chaperone mediated protein folding requiring cofactor" evidence=ISO;IDA] [GO:0051726 "regulation of cell cycle" evidence=ISO] [GO:0061077 "chaperone-mediated protein folding" evidence=IDA] [GO:0070062 "extracellular vesicular exosome" evidence=ISO;IDA] [GO:0072562 "blood microparticle" evidence=ISO] Pfam:PF00012 Prosite:PS01036 RGD:621725 GO:GO:0005524 GO:GO:0006950 GO:GO:0070062 GO:GO:0042470 GO:GO:0045892 GO:GO:0005730 GO:GO:0008380 GO:GO:0043025 GO:GO:0043005 GO:GO:0008021 GO:GO:0051082 GO:GO:0006397 GO:GO:0043531 GO:GO:0006351 GO:GO:0005681 GO:GO:0030529 PDB:1Q2G PDBsum:1Q2G GO:GO:0042623 eggNOG:COG0443 InterPro:IPR013126 PRINTS:PR00301 InterPro:IPR018181 PROSITE:PS00297 PROSITE:PS00329 GO:GO:0000974 GO:GO:0051085 HOVERGEN:HBG051845 KO:K03283 CTD:3312 NextBio:288328 EMBL:Y00054 EMBL:M11942 EMBL:BC061547 EMBL:BC098914 PIR:S07197 RefSeq:NP_077327.1 UniGene:Rn.120392 UniGene:Rn.129299 UniGene:Rn.201298 PDB:1CKR PDB:1UD0 PDB:2V7Z PDB:7HSC PDBsum:1CKR PDBsum:1UD0 PDBsum:2V7Z PDBsum:7HSC ProteinModelPortal:P63018 SMR:P63018 BioGrid:246629 DIP:DIP-33262N IntAct:P63018 MINT:MINT-2514077 PhosphoSite:P63018 World-2DPAGE:0004:P63018 PaxDb:P63018 PRIDE:P63018 GeneID:24468 KEGG:rno:24468 UCSC:RGD:621725 EvolutionaryTrace:P63018 PRO:PR:P63018 Genevestigator:P63018 Uniprot:P63018)

HSP 1 Score: 41.5874 bits (96), Expect = 4.353e-4
Identity = 17/45 (37.78%), Postives = 32/45 (71.11%), Query Frame = 0 
Query:    6 REGRKTNRNLESYCYNLKSTVEKDELRGKLSQEDKETVKDNISTV 50
            R+   +  +LESY +N+K+TVE ++L+GK++ EDK+ + D  + +
Sbjct:  533 RDKVSSKNSLESYAFNMKATVEDEKLQGKINDEDKQKILDKCNEI 577
[Close]
BLAST of EMLSAG00000001096 vs. GO
Match: - (symbol:Hspa8 "heat shock protein 8" species:10090 "Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0000974 "Prp19 complex" evidence=ISO] [GO:0005102 "receptor binding" evidence=ISO] [GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=ISO] [GO:0005622 "intracellular" evidence=IDA] [GO:0005634 "nucleus" evidence=ISO] [GO:0005681 "spliceosomal complex" evidence=IEA] [GO:0005730 "nucleolus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005829 "cytosol" evidence=IDA] [GO:0006200 "ATP catabolic process" evidence=ISO;IDA] [GO:0006351 "transcription, DNA-templated" evidence=IEA] [GO:0006355 "regulation of transcription, DNA-templated" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA] [GO:0006457 "protein folding" evidence=IDA] [GO:0006950 "response to stress" evidence=IEA] [GO:0008021 "synaptic vesicle" evidence=ISO] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0023026 "MHC class II protein complex binding" evidence=ISO] [GO:0030529 "ribonucleoprotein complex" evidence=ISO] [GO:0042623 "ATPase activity, coupled" evidence=ISO;IDA] [GO:0043005 "neuron projection" evidence=ISO] [GO:0043025 "neuronal cell body" evidence=ISO] [GO:0043234 "protein complex" evidence=ISO] [GO:0043531 "ADP binding" evidence=ISO] [GO:0044822 "poly(A) RNA binding" evidence=ISO] [GO:0045892 "negative regulation of transcription, DNA-templated" evidence=ISO] [GO:0051082 "unfolded protein binding" evidence=ISO;IPI] [GO:0051085 "chaperone mediated protein folding requiring cofactor" evidence=ISO;IGI] [GO:0051726 "regulation of cell cycle" evidence=IDA] [GO:0061077 "chaperone-mediated protein folding" evidence=ISO] [GO:0070062 "extracellular vesicular exosome" evidence=ISO;IDA] [GO:0072562 "blood microparticle" evidence=ISO] MGI:MGI:105384 Pfam:PF00012 Prosite:PS01036 GO:GO:0005829 GO:GO:0005524 GO:GO:0006950 GO:GO:0070062 GO:GO:0042470 GO:GO:0045892 GO:GO:0009986 GO:GO:0005730 GO:GO:0008380 GO:GO:0006397 GO:GO:0006351 GO:GO:0005681 GO:GO:0051726 GO:GO:0030529 PDB:3CQX PDBsum:3CQX GO:GO:0042623 eggNOG:COG0443 InterPro:IPR013126 PRINTS:PR00301 InterPro:IPR018181 PROSITE:PS00297 PROSITE:PS00329 GO:GO:0000974 GO:GO:0051085 HOVERGEN:HBG051845 GeneTree:ENSGT00740000115252 KO:K03283 OrthoDB:EOG7PCJGF TreeFam:TF105042 OMA:PMIVVEY CTD:3312 EMBL:M19141 EMBL:U27129 EMBL:U73744 EMBL:AK035286 EMBL:AK075935 EMBL:AK145579 EMBL:AK146708 EMBL:AK146985 EMBL:AK147864 EMBL:AK150474 EMBL:AK150498 EMBL:AK150701 EMBL:AK150958 EMBL:AK151065 EMBL:AK151127 EMBL:AK151287 EMBL:AK151435 EMBL:AK151516 EMBL:AK151537 EMBL:AK151775 EMBL:AK151808 EMBL:AK151865 EMBL:AK151892 EMBL:AK151948 EMBL:AK151997 EMBL:AK152598 EMBL:AK152697 EMBL:AK152703 EMBL:AK152803 EMBL:AK153032 EMBL:AK153834 EMBL:AK159479 EMBL:AK164000 EMBL:AK166643 EMBL:AK166721 EMBL:AK166767 EMBL:AK166776 EMBL:AK166808 EMBL:AK166830 EMBL:AK166846 EMBL:AK166861 EMBL:AK166873 EMBL:AK166908 EMBL:AK166910 EMBL:AK166913 EMBL:AK166933 EMBL:AK167043 EMBL:AK167121 EMBL:AK167122 EMBL:AK167134 EMBL:AK167163 EMBL:AK167218 EMBL:AK167229 EMBL:AK167845 EMBL:AK167910 EMBL:AK168492 EMBL:AK168519 EMBL:AK168542 EMBL:AK168711 EMBL:AK168750 EMBL:AK168776 EMBL:AK168887 EMBL:AK168934 EMBL:AK169093 EMBL:AK169179 EMBL:AK169236 EMBL:AK169293 EMBL:BC006722 EMBL:BC066191 EMBL:BC085486 EMBL:BC089322 EMBL:BC089457 EMBL:BC106193 EMBL:X54401 EMBL:X54402 EMBL:X54403 PIR:A45935 PIR:JC4853 RefSeq:NP_112442.2 UniGene:Mm.290774 UniGene:Mm.336743 UniGene:Mm.351377 UniGene:Mm.412745 UniGene:Mm.485345 ProteinModelPortal:P63017 SMR:P63017 BioGrid:200428 DIP:DIP-32353N IntAct:P63017 MINT:MINT-189032 COMPLUYEAST-2DPAGE:P63017 REPRODUCTION-2DPAGE:IPI00323357 REPRODUCTION-2DPAGE:P63017 REPRODUCTION-2DPAGE:Q6NZD0 SWISS-2DPAGE:P63017 UCD-2DPAGE:P63017 PaxDb:P63017 PRIDE:P63017 Ensembl:ENSMUST00000015800 GeneID:15481 KEGG:mmu:15481 UCSC:uc009ozx.3 InParanoid:P63017 EvolutionaryTrace:P63017 NextBio:288328 PRO:PR:P63017 ArrayExpress:P63017 Bgee:P63017 CleanEx:MM_HSPA8 Genevestigator:P63017 Uniprot:P63017)

HSP 1 Score: 41.5874 bits (96), Expect = 4.353e-4
Identity = 17/45 (37.78%), Postives = 32/45 (71.11%), Query Frame = 0 
Query:    6 REGRKTNRNLESYCYNLKSTVEKDELRGKLSQEDKETVKDNISTV 50
            R+   +  +LESY +N+K+TVE ++L+GK++ EDK+ + D  + +
Sbjct:  533 RDKVSSKNSLESYAFNMKATVEDEKLQGKINDEDKQKILDKCNEI 577
[Close]
BLAST of EMLSAG00000001096 vs. GO
Match: - (symbol:HSPA8 "Heat shock cognate 71 kDa protein" species:9796 "Equus caballus" [GO:0000974 "Prp19 complex" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0005730 "nucleolus" evidence=ISS] [GO:0030529 "ribonucleoprotein complex" evidence=ISS] [GO:0045892 "negative regulation of transcription, DNA-templated" evidence=ISS] Pfam:PF00012 Prosite:PS01036 GO:GO:0005829 GO:GO:0005524 GO:GO:0006950 GO:GO:0070062 GO:GO:0042470 GO:GO:0045892 GO:GO:0009986 GO:GO:0005730 GO:GO:0008380 GO:GO:0006200 GO:GO:0006397 GO:GO:0005681 GO:GO:0051726 GO:GO:0030529 GO:GO:0042623 eggNOG:COG0443 InterPro:IPR013126 PRINTS:PR00301 InterPro:IPR018181 PROSITE:PS00297 PROSITE:PS00329 GO:GO:0000974 GO:GO:0051085 HOGENOM:HOG000228135 HOVERGEN:HBG051845 KO:K03283 OMA:PMIVVEY CTD:3312 EMBL:AB292109 RefSeq:NP_001075247.1 UniGene:Eca.12976 UniGene:Eca.19986 ProteinModelPortal:A2Q0Z1 SMR:A2Q0Z1 STRING:9796.ENSECAP00000011500 BindingDB:A2Q0Z1 PRIDE:A2Q0Z1 GeneID:100009679 KEGG:ecb:100009679 InParanoid:A2Q0Z1 Uniprot:A2Q0Z1)

HSP 1 Score: 41.5874 bits (96), Expect = 4.353e-4
Identity = 17/45 (37.78%), Postives = 32/45 (71.11%), Query Frame = 0 
Query:    6 REGRKTNRNLESYCYNLKSTVEKDELRGKLSQEDKETVKDNISTV 50
            R+   +  +LESY +N+K+TVE ++L+GK++ EDK+ + D  + +
Sbjct:  533 RDKVSSKNSLESYAFNMKATVEDEKLQGKINDEDKQKILDKCNEI 577
[Close]
BLAST of EMLSAG00000001096 vs. GO
Match: - (symbol:HSPA8 "Heat shock cognate 71 kDa protein" species:9606 "Homo sapiens" [GO:0000974 "Prp19 complex" evidence=IDA] [GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005622 "intracellular" evidence=NAS] [GO:0005634 "nucleus" evidence=IDA] [GO:0005681 "spliceosomal complex" evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005829 "cytosol" evidence=TAS] [GO:0005886 "plasma membrane" evidence=TAS] [GO:0006200 "ATP catabolic process" evidence=NAS] [GO:0006351 "transcription, DNA-templated" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA] [GO:0006457 "protein folding" evidence=NAS] [GO:0006892 "post-Golgi vesicle-mediated transport" evidence=TAS] [GO:0006986 "response to unfolded protein" evidence=NAS] [GO:0007268 "synaptic transmission" evidence=TAS] [GO:0007269 "neurotransmitter secretion" evidence=TAS] [GO:0007411 "axon guidance" evidence=TAS] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0010467 "gene expression" evidence=TAS] [GO:0016032 "viral process" evidence=IEA] [GO:0016070 "RNA metabolic process" evidence=TAS] [GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0023026 "MHC class II protein complex binding" evidence=IDA] [GO:0030529 "ribonucleoprotein complex" evidence=IDA] [GO:0042470 "melanosome" evidence=IEA] [GO:0042623 "ATPase activity, coupled" evidence=NAS] [GO:0044822 "poly(A) RNA binding" evidence=IDA] [GO:0045892 "negative regulation of transcription, DNA-templated" evidence=IDA] [GO:0051082 "unfolded protein binding" evidence=IEA] [GO:0051085 "chaperone mediated protein folding requiring cofactor" evidence=IEA] [GO:0051726 "regulation of cell cycle" evidence=IEA] [GO:0061024 "membrane organization" evidence=TAS] [GO:0061202 "clathrin-sculpted gamma-aminobutyric acid transport vesicle membrane" evidence=TAS] [GO:0070062 "extracellular vesicular exosome" evidence=IDA] [GO:0072562 "blood microparticle" evidence=IDA] Reactome:REACT_13685 Reactome:REACT_71 Reactome:REACT_21257 Reactome:REACT_11123 Pfam:PF00012 Prosite:PS01036 GO:GO:0005829 GO:GO:0005886 GO:GO:0005524 GO:GO:0070062 GO:GO:0042470 Reactome:REACT_111045 GO:GO:0007411 GO:GO:0010467 GO:GO:0016071 GO:GO:0045892 GO:GO:0023026 GO:GO:0016032 GO:GO:0006457 GO:GO:0072562 GO:GO:0005730 GO:GO:0008380 GO:GO:0006397 GO:GO:0006351 GO:GO:0005681 GO:GO:0051726 GO:GO:0030529 GO:GO:0007269 GO:GO:0006892 GO:GO:0006986 PDB:4HWI PDBsum:4HWI PDB:3FZF PDB:3FZH PDB:3FZK PDB:3FZL PDB:3FZM PDB:3LDQ PDB:3M3Z PDBsum:3FZF PDBsum:3FZH PDBsum:3FZK PDBsum:3FZL PDBsum:3FZM PDBsum:3LDQ PDBsum:3M3Z GO:GO:0042623 eggNOG:COG0443 InterPro:IPR013126 PRINTS:PR00301 InterPro:IPR018181 PROSITE:PS00297 PROSITE:PS00329 GO:GO:0000974 GO:GO:0051085 GO:GO:0061202 HOGENOM:HOG000228135 PDB:3AGY PDB:3AGZ PDBsum:3AGY PDBsum:3AGZ HOVERGEN:HBG051845 KO:K03283 OrthoDB:EOG7PCJGF TreeFam:TF105042 OMA:PMIVVEY CTD:3312 EMBL:Y00371 EMBL:AB034951 EMBL:AF352832 EMBL:BC016179 EMBL:BC016660 EMBL:BC019816 PIR:A27077 RefSeq:NP_006588.1 RefSeq:NP_694881.1 RefSeq:XP_005271592.1 UniGene:Hs.180414 PDB:3ESK PDBsum:3ESK ProteinModelPortal:P11142 SMR:P11142 BioGrid:109544 IntAct:P11142 MINT:MINT-4998609 STRING:9606.ENSP00000227378 BindingDB:P11142 ChEMBL:CHEMBL1275223 PhosphoSite:P11142 DMDM:123648 DOSAC-COBS-2DPAGE:P11142 OGP:P11142 REPRODUCTION-2DPAGE:IPI00003865 SWISS-2DPAGE:P11142 UCD-2DPAGE:P11142 PaxDb:P11142 PeptideAtlas:P11142 PRIDE:P11142 DNASU:3312 Ensembl:ENST00000227378 Ensembl:ENST00000453788 Ensembl:ENST00000532636 Ensembl:ENST00000534624 GeneID:3312 KEGG:hsa:3312 UCSC:uc001pyo.3 UCSC:uc001pyp.3 GeneCards:GC11M122969 H-InvDB:HIX0033867 HGNC:HGNC:5241 HPA:CAB002056 MIM:600816 neXtProt:NX_P11142 PharmGKB:PA29507 InParanoid:P11142 PhylomeDB:P11142 ChiTaRS:HSPA8 EvolutionaryTrace:P11142 GeneWiki:HSPA8 GenomeRNAi:3312 NextBio:13136 PMAP-CutDB:P11142 PRO:PR:P11142 ArrayExpress:P11142 Bgee:P11142 CleanEx:HS_HSPA8 Genevestigator:P11142 Uniprot:P11142)

HSP 1 Score: 41.5874 bits (96), Expect = 4.353e-4
Identity = 17/45 (37.78%), Postives = 32/45 (71.11%), Query Frame = 0 
Query:    6 REGRKTNRNLESYCYNLKSTVEKDELRGKLSQEDKETVKDNISTV 50
            R+   +  +LESY +N+K+TVE ++L+GK++ EDK+ + D  + +
Sbjct:  533 RDKVSSKNSLESYAFNMKATVEDEKLQGKINDEDKQKILDKCNEI 577
[Close]
BLAST of EMLSAG00000001096 vs. GO
Match: - (symbol:HSPA8 "Uncharacterized protein" species:9615 "Canis lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA] Pfam:PF00012 Prosite:PS01036 GO:GO:0005524 InterPro:IPR013126 PRINTS:PR00301 InterPro:IPR018181 PROSITE:PS00297 PROSITE:PS00329 GeneTree:ENSGT00740000115252 KO:K03283 OrthoDB:EOG7PCJGF TreeFam:TF105042 OMA:PMIVVEY EMBL:AAEX03003408 RefSeq:XP_005619707.1 ProteinModelPortal:E2R0T6 SMR:E2R0T6 PRIDE:E2R0T6 Ensembl:ENSCAFT00000018533 GeneID:479406 NextBio:20854592 Uniprot:E2R0T6)

HSP 1 Score: 41.5874 bits (96), Expect = 4.353e-4
Identity = 17/45 (37.78%), Postives = 32/45 (71.11%), Query Frame = 0 
Query:    6 REGRKTNRNLESYCYNLKSTVEKDELRGKLSQEDKETVKDNISTV 50
            R+   +  +LESY +N+K+TVE ++L+GK++ EDK+ + D  + +
Sbjct:  533 RDKVSSKNSLESYAFNMKATVEDEKLQGKINDEDKQKILDKCNEI 577
[Close]
BLAST of EMLSAG00000001096 vs. C. finmarchicus
Match: gi|592938432|gb|GAXK01020121.1| (TSA: Calanus finmarchicus comp13797_c0_seq2 transcribed RNA sequence)

HSP 1 Score: 43.5134 bits (101), Expect = 2.083e-5
Identity = 17/32 (53.12%), Postives = 26/32 (81.25%), Query Frame = 0 
Query:   14 NLESYCYNLKSTVEKDELRGKLSQEDKETVKD 45
            NLESYC+N+KST+E +  RGK+S+ D++ + D
Sbjct:  335 NLESYCFNMKSTLEDENARGKISEPDRKVITD 430
[Close]
BLAST of EMLSAG00000001096 vs. C. finmarchicus
Match: gi|592938433|gb|GAXK01020120.1| (TSA: Calanus finmarchicus comp13797_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 43.5134 bits (101), Expect = 2.108e-5
Identity = 17/32 (53.12%), Postives = 26/32 (81.25%), Query Frame = 0 
Query:   14 NLESYCYNLKSTVEKDELRGKLSQEDKETVKD 45
            NLESYC+N+KST+E +  RGK+S+ D++ + D
Sbjct:  347 NLESYCFNMKSTLEDENARGKISEPDRKVITD 442
[Close]
BLAST of EMLSAG00000001096 vs. C. finmarchicus
Match: gi|592935542|gb|GAXK01023011.1| (TSA: Calanus finmarchicus comp4952551_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 40.0466 bits (92), Expect = 7.369e-5
Identity = 19/43 (44.19%), Postives = 29/43 (67.44%), Query Frame = 0 
Query:   10 KTNRNLESYCYNLKSTVEKDELRGKLSQEDKETVKDNISTVKH 52
            K    LE Y YN+K+  E ++L+GKLS EDK+T+ D ++ V+ 
Sbjct:  100 KAKNGLEGYVYNIKNQCEDEKLKGKLSDEDKKTLLDKVNEVQE 228
[Close]
BLAST of EMLSAG00000001096 vs. C. finmarchicus
Match: gi|592857919|gb|GAXK01099643.1| (TSA: Calanus finmarchicus comp2341041_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 36.965 bits (84), Expect = 1.450e-3
Identity = 20/44 (45.45%), Postives = 32/44 (72.73%), Query Frame = 0 
Query:   15 LESYCYNLKSTVEKDE-LRGKLSQEDKETVKDNI-STVKHVGGN 56
            LESY YN+K+T+  +E ++ KL+ EDKET++D + ST + +  N
Sbjct:  135 LESYIYNIKNTINDEEKIKDKLTDEDKETLEDLVKSTTEWIDEN 266
[Close]
BLAST of EMLSAG00000001096 vs. C. finmarchicus
Match: gi|592931672|gb|GAXK01026881.1| (TSA: Calanus finmarchicus comp18245_c1_seq3 transcribed RNA sequence)

HSP 1 Score: 35.8094 bits (81), Expect = 8.449e-3
Identity = 12/25 (48.00%), Postives = 23/25 (92.00%), Query Frame = 0 
Query:   15 LESYCYNLKSTVEKDELRGKLSQED 39
            LESYC+N+K+T+E ++++ K+S++D
Sbjct:  383 LESYCFNMKTTIEDEKVKDKISEDD 457
[Close]
BLAST of EMLSAG00000001096 vs. C. finmarchicus
Match: gi|592931673|gb|GAXK01026880.1| (TSA: Calanus finmarchicus comp18245_c1_seq2 transcribed RNA sequence)

HSP 1 Score: 35.8094 bits (81), Expect = 1.239e-2
Identity = 12/25 (48.00%), Postives = 23/25 (92.00%), Query Frame = 0 
Query:   15 LESYCYNLKSTVEKDELRGKLSQED 39
            LESYC+N+K+T+E ++++ K+S++D
Sbjct:  383 LESYCFNMKTTIEDEKVKDKISEDD 457
[Close]
BLAST of EMLSAG00000001096 vs. C. finmarchicus
Match: gi|592931674|gb|GAXK01026879.1| (TSA: Calanus finmarchicus comp18245_c1_seq1 transcribed RNA sequence)

HSP 1 Score: 35.8094 bits (81), Expect = 1.240e-2
Identity = 12/25 (48.00%), Postives = 23/25 (92.00%), Query Frame = 0 
Query:   15 LESYCYNLKSTVEKDELRGKLSQED 39
            LESYC+N+K+T+E ++++ K+S++D
Sbjct:  383 LESYCFNMKTTIEDEKVKDKISEDD 457
[Close]
BLAST of EMLSAG00000001096 vs. C. finmarchicus
Match: gi|592785895|gb|GAXK01168673.1| (TSA: Calanus finmarchicus comp613_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 33.8834 bits (76), Expect = 2.799e-2
Identity = 12/31 (38.71%), Postives = 26/31 (83.87%), Query Frame = 0 
Query:   15 LESYCYNLKSTVEKDELRGKLSQEDKETVKD 45
            LESYC+N+K+T++ ++++ K+S++D + + D
Sbjct:  116 LESYCFNMKTTLDDEKVKDKISEDDMKKITD 208
[Close]
BLAST of EMLSAG00000001096 vs. C. finmarchicus
Match: gi|592899057|gb|GAXK01059318.1| (TSA: Calanus finmarchicus comp6746799_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 32.7278 bits (73), Expect = 5.321e-2
Identity = 15/34 (44.12%), Postives = 24/34 (70.59%), Query Frame = 0 
Query:   14 NLESYCYNLKSTVEKDELRGKLSQEDKETVKDNI 47
            +LE+Y Y+LK+T+  D++ GKL + DK T+   I
Sbjct:  203 SLENYAYSLKNTMSDDKVAGKLEESDKTTLSAKI 304
[Close]
BLAST of EMLSAG00000001096 vs. C. finmarchicus
Match: gi|592863834|gb|GAXK01093728.1| (TSA: Calanus finmarchicus comp6985163_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 32.3426 bits (72), Expect = 6.939e-2
Identity = 20/50 (40.00%), Postives = 29/50 (58.00%), Query Frame = 0 
Query:    3 KSTREGRKTNRNLESYCYNLKSTVEKDE--LRGKLSQEDKETVKDNISTV 50
            K  +E       LESY YNLK+T++ DE  +  KLS +DKE ++  I+  
Sbjct:  228 KKVKERIDARNGLESYLYNLKNTLDDDEKGVADKLSADDKEEMESMINEA 377
[Close]
BLAST of EMLSAG00000001096 vs. L. salmonis peptides
Match: EMLSAP00000001096 (pep:novel supercontig:LSalAtl2s:LSalAtl2s117:833403:833977:-1 gene:EMLSAG00000001096 transcript:EMLSAT00000001096 description:"snap-LSalAtl2s117-processed-gene-8.13")

HSP 1 Score: 187.963 bits (476), Expect = 6.230e-63
Identity = 90/90 (100.00%), Postives = 90/90 (100.00%), Query Frame = 0 
Query:    1 MLKSTREGRKTNRNLESYCYNLKSTVEKDELRGKLSQEDKETVKDNISTVKHVGGNIIFWGCLPTKRKDNSSGSKGTEMCIVMDSPAPYF 90
            MLKSTREGRKTNRNLESYCYNLKSTVEKDELRGKLSQEDKETVKDNISTVKHVGGNIIFWGCLPTKRKDNSSGSKGTEMCIVMDSPAPYF
Sbjct:    1 MLKSTREGRKTNRNLESYCYNLKSTVEKDELRGKLSQEDKETVKDNISTVKHVGGNIIFWGCLPTKRKDNSSGSKGTEMCIVMDSPAPYF 90
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BLAST of EMLSAG00000001096 vs. L. salmonis peptides
Match: EMLSAP00000011625 (pep:novel supercontig:LSalAtl2s:LSalAtl2s805:197005:264411:-1 gene:EMLSAG00000011625 transcript:EMLSAT00000011625 description:"maker-LSalAtl2s805-augustus-gene-2.13")

HSP 1 Score: 56.225 bits (134), Expect = 1.583e-10
Identity = 26/30 (86.67%), Postives = 28/30 (93.33%), Query Frame = 0 
Query:   15 LESYCYNLKSTVEKDELRGKLSQEDKETVK 44
            LESYC+NLKSTVEKDE +GKLSQED ETVK
Sbjct:   94 LESYCFNLKSTVEKDEFKGKLSQEDIETVK 123
The following BLAST results are available for this feature:
BLAST of EMLSAG00000001096 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO)
Total hits: 25
Match NameE-valueIdentityDescription
-4.353e-437.78symbol:Hspa8 "heat shock 70kDa protein 8" species:... [more]
-4.353e-437.78symbol:Hspa8 "heat shock protein 8" species:10090 ... [more]
-4.353e-437.78symbol:HSPA8 "Heat shock cognate 71 kDa protein" s... [more]
-4.353e-437.78symbol:HSPA8 "Heat shock cognate 71 kDa protein" s... [more]
-4.353e-437.78symbol:HSPA8 "Uncharacterized protein" species:961... [more]

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BLAST of EMLSAG00000001096 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA)
Total hits: 17
Match NameE-valueIdentityDescription
gi|592938432|gb|GAXK01020121.1|2.083e-553.13TSA: Calanus finmarchicus comp13797_c0_seq2 transc... [more]
gi|592938433|gb|GAXK01020120.1|2.108e-553.13TSA: Calanus finmarchicus comp13797_c0_seq1 transc... [more]
gi|592935542|gb|GAXK01023011.1|7.369e-544.19TSA: Calanus finmarchicus comp4952551_c0_seq1 tran... [more]
gi|592857919|gb|GAXK01099643.1|1.450e-345.45TSA: Calanus finmarchicus comp2341041_c0_seq1 tran... [more]
gi|592931672|gb|GAXK01026881.1|8.449e-348.00TSA: Calanus finmarchicus comp18245_c1_seq3 transc... [more]
gi|592931673|gb|GAXK01026880.1|1.239e-248.00TSA: Calanus finmarchicus comp18245_c1_seq2 transc... [more]
gi|592931674|gb|GAXK01026879.1|1.240e-248.00TSA: Calanus finmarchicus comp18245_c1_seq1 transc... [more]
gi|592785895|gb|GAXK01168673.1|2.799e-238.71TSA: Calanus finmarchicus comp613_c0_seq1 transcri... [more]
gi|592899057|gb|GAXK01059318.1|5.321e-244.12TSA: Calanus finmarchicus comp6746799_c0_seq1 tran... [more]
gi|592863834|gb|GAXK01093728.1|6.939e-240.00TSA: Calanus finmarchicus comp6985163_c0_seq1 tran... [more]

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BLAST of EMLSAG00000001096 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self)
Total hits: 2
Match NameE-valueIdentityDescription
EMLSAP000000010966.230e-63100.00pep:novel supercontig:LSalAtl2s:LSalAtl2s117:83340... [more]
EMLSAP000000116251.583e-1086.67pep:novel supercontig:LSalAtl2s:LSalAtl2s805:19700... [more]
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BLAST of EMLSAG00000001096 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000001096 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000001096 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017))
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000001096 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s117supercontigLSalAtl2s117:833403..833977 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Blast vs. GO2014-04-02
TblastN vs C. finmarchicus TSA2014-05-09
Blastp vs. self2014-05-10
Blastp vs. SwissProt2017-02-10
Blastp vs. Selected Arthropods2017-02-20
Blastp vs. NR (2/2017)2017-02-20
Blastp vs. Tigriopus kingsejongensis proteins2018-04-18
Properties
Property NameValue
Logic nameensemblgenomes
Descriptionsnap-LSalAtl2s117-processed-gene-8.13
Biotypeprotein_coding
EvidenceIEA
NoteHypothetical protein
Cross References
External references for this gene
DatabaseAccession
Ensembl Metazoa (gene)EMLSAG00000001096 (primary cross-reference)
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
EMLSAT00000001096EMLSAT00000001096-696943Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at LSalAtl2s117:833403..833977-

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAG00000001096-683862 ID=EMLSAG00000001096-683862|Name=EMLSAG00000001096|organism=Lepeophtheirus salmonis|type=gene|length=575bp|location=Sequence derived from alignment at LSalAtl2s117:833403..833977- (Lepeophtheirus salmonis)
ATGCTGAAGAGCACAAGGGAAGGGCGGAAAACAAACAGAAATCTTGAGTC
TTATTGCTACAACTTGAAGTCAACAGTGGAAAAGGATGAGTTGAGGGGAA
AGCTATCTCAAGAGGATAAAGAGACAGTCAAGGACAAGTGTGAAGAGACT
ATCAAATGGATGGATACTTAATCAAACTGCAGTAAAGAATGAATAGTTAT
ACAAAAAAAAGTTGAGGCTTTAAGGAATCCCTTATTTTTGTTCCTCCAAA
CACTTTTTTATTCAGTCCATAAAATGTTTTTTACTCTTAAAATAAACTTA
GTATTTAAATTATAGCCCGCTCTTTTCTTTGTCCTTGGGTAATGTTACAA
AATTACGAAGGGTTCAAATAATTATTTTTTCCACAGTAGGTGCTCCATTA
GTTTTAATTGTTTATCGATTAATAATCTATGTTTGATAGCATCTCCACTG
TCAAGCATGTGGGAGGAAACATTATCTTTTGGGGATGTCTTCCAACTAAA
AGAAAGGACAACTCATCTGGATCAAAGGGCACTGAAATGTGTATCGTAAT
GGATTCTCCAGCTCCATACTTCTGA
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