EMLSAG00000001141, EMLSAG00000001141-683907 (gene) Lepeophtheirus salmonis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of EMLSAG00000001141 vs. C. finmarchicus
Match: gi|592910888|gb|GAXK01047487.1| (TSA: Calanus finmarchicus comp75623_c0_seq4 transcribed RNA sequence) HSP 1 Score: 40.4318 bits (93), Expect = 1.898e-4 Identity = 21/45 (46.67%), Postives = 30/45 (66.67%), Query Frame = 0 Query: 15 DLSKLKQLIPGMNTSGKDVSHVEVIEEANRYIEKLHSHLVCQIRT 59 DL +LK LIP M T+ +V+H+++I EA RYI+ L L +I T Sbjct: 296 DLVRLKDLIPSM-TAKDNVTHLDIILEAIRYIDSLQDKLADKIDT 427
BLAST of EMLSAG00000001141 vs. C. finmarchicus
Match: gi|592910890|gb|GAXK01047485.1| (TSA: Calanus finmarchicus comp75623_c0_seq2 transcribed RNA sequence) HSP 1 Score: 40.4318 bits (93), Expect = 1.956e-4 Identity = 21/45 (46.67%), Postives = 30/45 (66.67%), Query Frame = 0 Query: 15 DLSKLKQLIPGMNTSGKDVSHVEVIEEANRYIEKLHSHLVCQIRT 59 DL +LK LIP M T+ +V+H+++I EA RYI+ L L +I T Sbjct: 314 DLVRLKDLIPSM-TAKDNVTHLDIILEAIRYIDSLQDKLADKIDT 445
BLAST of EMLSAG00000001141 vs. C. finmarchicus
Match: gi|592780422|gb|GAXK01174146.1| (TSA: Calanus finmarchicus comp230339_c0_seq1 transcribed RNA sequence) HSP 1 Score: 40.0466 bits (92), Expect = 3.266e-4 Identity = 18/56 (32.14%), Postives = 31/56 (55.36%), Query Frame = 0 Query: 16 LSKLKQLIPGMNTSGKDVSHVEVIEEANRYIEKLHSHLVCQIRTHGFPXKLKXXAG 71 L +LK++IP M + + V+++EE RYI L L+ +++ +G P L G Sbjct: 131 LWRLKEMIPNM-AQQQQIDEVDILEETTRYILSLEQKLLKKVQEYGLPDSLNKLKG 295
BLAST of EMLSAG00000001141 vs. C. finmarchicus
Match: gi|592910883|gb|GAXK01047492.1| (TSA: Calanus finmarchicus comp75623_c0_seq9 transcribed RNA sequence) HSP 1 Score: 38.5058 bits (88), Expect = 6.428e-4 Identity = 20/43 (46.51%), Postives = 30/43 (69.77%), Query Frame = 0 Query: 15 DLSKLKQLIPGMNTSGKDVSHVEVIEEANRYIEKLHSHLVCQI 57 DL +LK LIP + T+ +V+H+++I EA RYI+ L LV +I Sbjct: 204 DLMRLKDLIPSV-TAKDNVTHLDIILEAIRYIDSLQDKLVDKI 329
BLAST of EMLSAG00000001141 vs. C. finmarchicus
Match: gi|592910882|gb|GAXK01047493.1| (TSA: Calanus finmarchicus comp75623_c0_seq10 transcribed RNA sequence) HSP 1 Score: 38.5058 bits (88), Expect = 6.973e-4 Identity = 20/45 (44.44%), Postives = 30/45 (66.67%), Query Frame = 0 Query: 15 DLSKLKQLIPGMNTSGKDVSHVEVIEEANRYIEKLHSHLVCQIRT 59 DL +LK LIP + T+ +V+H+++I EA RYI+ L L +I T Sbjct: 204 DLMRLKDLIPSV-TAKDNVTHLDIILEAIRYIDSLQDKLADKIDT 335
BLAST of EMLSAG00000001141 vs. C. finmarchicus
Match: gi|592910885|gb|GAXK01047490.1| (TSA: Calanus finmarchicus comp75623_c0_seq7 transcribed RNA sequence) HSP 1 Score: 35.4242 bits (80), Expect = 8.395e-3 Identity = 20/41 (48.78%), Postives = 28/41 (68.29%), Query Frame = 0 Query: 18 KLKQLIPGMNTSGKD-VSHVEVIEEANRYIEKLHSHLVCQI 57 +LK LIP M + KD V+H+++I EA RYI+ L LV +I Sbjct: 215 RLKDLIPSM--AAKDNVTHLDIILEAIRYIDSLQDKLVDKI 331
BLAST of EMLSAG00000001141 vs. C. finmarchicus
Match: gi|592806333|gb|GAXK01148235.1| (TSA: Calanus finmarchicus comp1027492_c1_seq1 transcribed RNA sequence) HSP 1 Score: 36.1946 bits (82), Expect = 8.493e-3 Identity = 18/53 (33.96%), Postives = 30/53 (56.60%), Query Frame = 0 Query: 5 ELKFQSAFDKDLSKLKQLIPGMNTSGKDVSHVEVIEEANRYIEKLHSHLVCQI 57 E K Q +++ KLK L+P + VS V++IEE YI++LH + ++ Sbjct: 589 ERKKQKEGHEEMEKLKTLVPTLRVRDGRVSQVDIIEETISYIDQLHRRIAERL 747
BLAST of EMLSAG00000001141 vs. C. finmarchicus
Match: gi|592910884|gb|GAXK01047491.1| (TSA: Calanus finmarchicus comp75623_c0_seq8 transcribed RNA sequence) HSP 1 Score: 35.4242 bits (80), Expect = 1.005e-2 Identity = 20/43 (46.51%), Postives = 28/43 (65.12%), Query Frame = 0 Query: 18 KLKQLIPGMNTSGKD-VSHVEVIEEANRYIEKLHSHLVCQIRT 59 +LK LIP M + KD V+H+++I EA RYI+ L L +I T Sbjct: 215 RLKDLIPSM--AAKDNVTHLDIILEAIRYIDSLQDKLADKIDT 337
BLAST of EMLSAG00000001141 vs. C. finmarchicus
Match: gi|592907828|gb|GAXK01050547.1| (TSA: Calanus finmarchicus comp30721_c0_seq1 transcribed RNA sequence) HSP 1 Score: 34.2686 bits (77), Expect = 1.726e-2 Identity = 16/39 (41.03%), Postives = 27/39 (69.23%), Query Frame = 0 Query: 15 DLSKLKQLIPGMNTSGKDVSHVEVIEEANRYIEKLHSHL 53 D+ KLK+++P + SGK +S +++I EA +YI+ L L Sbjct: 104 DMEKLKKMLPDLQQSGK-LSQLDIILEAIQYIKTLQYEL 217
BLAST of EMLSAG00000001141 vs. C. finmarchicus
Match: gi|592873678|gb|GAXK01083884.1| (TSA: Calanus finmarchicus comp176481_c0_seq1 transcribed RNA sequence) HSP 1 Score: 30.4166 bits (67), Expect = 5.159e-1 Identity = 15/42 (35.71%), Postives = 26/42 (61.90%), Query Frame = 0 Query: 14 KDLSKLKQLIPGMNTSGKDVSHVEVIEEANRYIEKLHSHLVC 55 K+L+ L+ +P M K S ++++ EA +YIE+L +VC Sbjct: 254 KELTSLRTTLPHM----KKASDLDLVLEAIKYIEQLQQKVVC 367
BLAST of EMLSAG00000001141 vs. L. salmonis peptides
Match: EMLSAP00000001141 (pep:novel supercontig:LSalAtl2s:LSalAtl2s118:431419:431791:-1 gene:EMLSAG00000001141 transcript:EMLSAT00000001141 description:"maker-LSalAtl2s118-augustus-gene-4.18") HSP 1 Score: 182.956 bits (463), Expect = 8.201e-61 Identity = 94/94 (100.00%), Postives = 94/94 (100.00%), Query Frame = 0 Query: 1 MSRKELKFQSAFDKDLSKLKQLIPGMNTSGKDVSHVEVIEEANRYIEKLHSHLVCQIRTHGFPXKLKXXAGRXXANDSNDDISRAIKSFARKNP 94 MSRKELKFQSAFDKDLSKLKQLIPGMNTSGKDVSHVEVIEEANRYIEKLHSHLVCQIRTHGFPXKLKXXAGRXXANDSNDDISRAIKSFARKNP Sbjct: 1 MSRKELKFQSAFDKDLSKLKQLIPGMNTSGKDVSHVEVIEEANRYIEKLHSHLVCQIRTHGFPXKLKXXAGRXXANDSNDDISRAIKSFARKNP 94
BLAST of EMLSAG00000001141 vs. Tigriopus kingsejongenis genes
Match: snap_masked-scaffold619_size123246-processed-gene-0.28 (protein:Tk05506 transcript:snap_masked-scaffold619_size123246-processed-gene-0.28-mRNA-1 annotation:"transcription factor partial") HSP 1 Score: 45.8246 bits (107), Expect = 2.239e-7 Identity = 23/53 (43.40%), Postives = 33/53 (62.26%), Query Frame = 0 Query: 5 ELKFQSAFDKDLSKLKQLIPGMNTSGKDVSHVEVIEEANRYIEKLHSHLVCQI 57 ELK F K+ +LK L+P + T +D+S VE++EE RYI+ LH L +I Sbjct: 95 ELKKSKKFQKEYGRLKHLVPAL-TEREDLSKVEIVEETIRYIDALHHQLASRI 146 The following BLAST results are available for this feature:
BLAST of EMLSAG00000001141 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO) Total hits: 0
BLAST of EMLSAG00000001141 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA) Total hits: 21
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BLAST of EMLSAG00000001141 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self) Total hits: 1
BLAST of EMLSAG00000001141 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt) Total hits: 0
BLAST of EMLSAG00000001141 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods) Total hits: 0
BLAST of EMLSAG00000001141 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017)) Total hits: 0
BLAST of EMLSAG00000001141 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins) Total hits: 1
Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Cross References
External references for this gene
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at LSalAtl2s118:431419..431791- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>EMLSAG00000001141-683907 ID=EMLSAG00000001141-683907|Name=EMLSAG00000001141|organism=Lepeophtheirus salmonis|type=gene|length=373bp|location=Sequence derived from alignment at LSalAtl2s118:431419..431791- (Lepeophtheirus salmonis)back to top Add to Basket
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