EMLSAG00000001141, EMLSAG00000001141-683907 (gene) Lepeophtheirus salmonis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of EMLSAG00000001141 vs. C. finmarchicus
Match: gi|592789150|gb|GAXK01165418.1| (TSA: Calanus finmarchicus comp6631287_c0_seq1 transcribed RNA sequence) HSP 1 Score: 27.7202 bits (60), Expect = 4.578e+0 Identity = 19/38 (50.00%), Postives = 21/38 (55.26%), Query Frame = 0 Query: 16 LSKLKQLIPGMNTSGKDVSHVEVIEEANRYIEKLHSHL 53 LSKLK+L+P M K VS VEVI YI L L Sbjct: 77 LSKLKELVPNMPKDRK-VSKVEVINNVIDYICDLQMAL 187
BLAST of EMLSAG00000001141 vs. L. salmonis peptides
Match: EMLSAP00000001141 (pep:novel supercontig:LSalAtl2s:LSalAtl2s118:431419:431791:-1 gene:EMLSAG00000001141 transcript:EMLSAT00000001141 description:"maker-LSalAtl2s118-augustus-gene-4.18") HSP 1 Score: 182.956 bits (463), Expect = 8.201e-61 Identity = 94/94 (100.00%), Postives = 94/94 (100.00%), Query Frame = 0 Query: 1 MSRKELKFQSAFDKDLSKLKQLIPGMNTSGKDVSHVEVIEEANRYIEKLHSHLVCQIRTHGFPXKLKXXAGRXXANDSNDDISRAIKSFARKNP 94 MSRKELKFQSAFDKDLSKLKQLIPGMNTSGKDVSHVEVIEEANRYIEKLHSHLVCQIRTHGFPXKLKXXAGRXXANDSNDDISRAIKSFARKNP Sbjct: 1 MSRKELKFQSAFDKDLSKLKQLIPGMNTSGKDVSHVEVIEEANRYIEKLHSHLVCQIRTHGFPXKLKXXAGRXXANDSNDDISRAIKSFARKNP 94
BLAST of EMLSAG00000001141 vs. Tigriopus kingsejongenis genes
Match: snap_masked-scaffold619_size123246-processed-gene-0.28 (protein:Tk05506 transcript:snap_masked-scaffold619_size123246-processed-gene-0.28-mRNA-1 annotation:"transcription factor partial") HSP 1 Score: 45.8246 bits (107), Expect = 2.239e-7 Identity = 23/53 (43.40%), Postives = 33/53 (62.26%), Query Frame = 0 Query: 5 ELKFQSAFDKDLSKLKQLIPGMNTSGKDVSHVEVIEEANRYIEKLHSHLVCQI 57 ELK F K+ +LK L+P + T +D+S VE++EE RYI+ LH L +I Sbjct: 95 ELKKSKKFQKEYGRLKHLVPAL-TEREDLSKVEIVEETIRYIDALHHQLASRI 146 The following BLAST results are available for this feature:
BLAST of EMLSAG00000001141 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO) Total hits: 0
BLAST of EMLSAG00000001141 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA) Total hits: 21
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BLAST of EMLSAG00000001141 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self) Total hits: 1
BLAST of EMLSAG00000001141 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt) Total hits: 0
BLAST of EMLSAG00000001141 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods) Total hits: 0
BLAST of EMLSAG00000001141 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017)) Total hits: 0
BLAST of EMLSAG00000001141 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins) Total hits: 1
Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Cross References
External references for this gene
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at LSalAtl2s118:431419..431791- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>EMLSAG00000001141-683907 ID=EMLSAG00000001141-683907|Name=EMLSAG00000001141|organism=Lepeophtheirus salmonis|type=gene|length=373bp|location=Sequence derived from alignment at LSalAtl2s118:431419..431791- (Lepeophtheirus salmonis)back to top Add to Basket
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