EMLSAG00000001192, EMLSAG00000001192-683958 (gene) Lepeophtheirus salmonis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of EMLSAG00000001192 vs. C. finmarchicus
Match: gi|592926567|gb|GAXK01031878.1| (TSA: Calanus finmarchicus comp20855_c3_seq11 transcribed RNA sequence) HSP 1 Score: 27.7202 bits (60), Expect = 4.270e+0 Identity = 12/35 (34.29%), Postives = 20/35 (57.14%), Query Frame = 0 Query: 48 HFSIKGNQELGIRLARIIKEKKLFGGKNATDLVLI 82 HF ++ N++ +ARI+K K F A +L+ I Sbjct: 389 HFPLRRNKDQKYPVARILKLKYTFPASQARNLIFI 493
BLAST of EMLSAG00000001192 vs. C. finmarchicus
Match: gi|592926537|gb|GAXK01031907.1| (TSA: Calanus finmarchicus comp20855_c10_seq16 transcribed RNA sequence) HSP 1 Score: 27.7202 bits (60), Expect = 4.571e+0 Identity = 12/35 (34.29%), Postives = 20/35 (57.14%), Query Frame = 0 Query: 48 HFSIKGNQELGIRLARIIKEKKLFGGKNATDLVLI 82 HF ++ N++ +ARI+K K F A +L+ I Sbjct: 74 HFPLRRNKDQKYPVARILKLKYTFPASQARNLIFI 178
BLAST of EMLSAG00000001192 vs. C. finmarchicus
Match: gi|592926538|gb|GAXK01031906.1| (TSA: Calanus finmarchicus comp20855_c10_seq15 transcribed RNA sequence) HSP 1 Score: 27.7202 bits (60), Expect = 4.579e+0 Identity = 12/35 (34.29%), Postives = 20/35 (57.14%), Query Frame = 0 Query: 48 HFSIKGNQELGIRLARIIKEKKLFGGKNATDLVLI 82 HF ++ N++ +ARI+K K F A +L+ I Sbjct: 88 HFPLRRNKDQKYPVARILKLKYTFPASQARNLIFI 192
BLAST of EMLSAG00000001192 vs. C. finmarchicus
Match: gi|592926541|gb|GAXK01031904.1| (TSA: Calanus finmarchicus comp20855_c10_seq13 transcribed RNA sequence) HSP 1 Score: 27.7202 bits (60), Expect = 4.602e+0 Identity = 12/35 (34.29%), Postives = 20/35 (57.14%), Query Frame = 0 Query: 48 HFSIKGNQELGIRLARIIKEKKLFGGKNATDLVLI 82 HF ++ N++ +ARI+K K F A +L+ I Sbjct: 74 HFPLRRNKDQKYPVARILKLKYTFPASQARNLIFI 178
BLAST of EMLSAG00000001192 vs. C. finmarchicus
Match: gi|592926542|gb|GAXK01031903.1| (TSA: Calanus finmarchicus comp20855_c10_seq12 transcribed RNA sequence) HSP 1 Score: 27.7202 bits (60), Expect = 4.612e+0 Identity = 12/35 (34.29%), Postives = 20/35 (57.14%), Query Frame = 0 Query: 48 HFSIKGNQELGIRLARIIKEKKLFGGKNATDLVLI 82 HF ++ N++ +ARI+K K F A +L+ I Sbjct: 88 HFPLRRNKDQKYPVARILKLKYTFPASQARNLIFI 192
BLAST of EMLSAG00000001192 vs. C. finmarchicus
Match: gi|592926543|gb|GAXK01031902.1| (TSA: Calanus finmarchicus comp20855_c10_seq11 transcribed RNA sequence) HSP 1 Score: 27.7202 bits (60), Expect = 4.642e+0 Identity = 12/35 (34.29%), Postives = 20/35 (57.14%), Query Frame = 0 Query: 48 HFSIKGNQELGIRLARIIKEKKLFGGKNATDLVLI 82 HF ++ N++ +ARI+K K F A +L+ I Sbjct: 185 HFPLRRNKDQKYPVARILKLKYTFPASQARNLIFI 289
BLAST of EMLSAG00000001192 vs. C. finmarchicus
Match: gi|592926545|gb|GAXK01031900.1| (TSA: Calanus finmarchicus comp20855_c10_seq9 transcribed RNA sequence) HSP 1 Score: 27.7202 bits (60), Expect = 4.667e+0 Identity = 12/35 (34.29%), Postives = 20/35 (57.14%), Query Frame = 0 Query: 48 HFSIKGNQELGIRLARIIKEKKLFGGKNATDLVLI 82 HF ++ N++ +ARI+K K F A +L+ I Sbjct: 185 HFPLRRNKDQKYPVARILKLKYTFPASQARNLIFI 289
BLAST of EMLSAG00000001192 vs. C. finmarchicus
Match: gi|592926578|gb|GAXK01031868.1| (TSA: Calanus finmarchicus comp20855_c3_seq1 transcribed RNA sequence) HSP 1 Score: 27.7202 bits (60), Expect = 4.949e+0 Identity = 12/35 (34.29%), Postives = 20/35 (57.14%), Query Frame = 0 Query: 48 HFSIKGNQELGIRLARIIKEKKLFGGKNATDLVLI 82 HF ++ N++ +ARI+K K F A +L+ I Sbjct: 389 HFPLRRNKDQKYPVARILKLKYTFPASQARNLIFI 493
BLAST of EMLSAG00000001192 vs. C. finmarchicus
Match: gi|592926550|gb|GAXK01031895.1| (TSA: Calanus finmarchicus comp20855_c10_seq4 transcribed RNA sequence) HSP 1 Score: 27.7202 bits (60), Expect = 4.968e+0 Identity = 12/35 (34.29%), Postives = 20/35 (57.14%), Query Frame = 0 Query: 48 HFSIKGNQELGIRLARIIKEKKLFGGKNATDLVLI 82 HF ++ N++ +ARI+K K F A +L+ I Sbjct: 1532 HFPLRRNKDQKYPVARILKLKYTFPASQARNLIFI 1636
BLAST of EMLSAG00000001192 vs. C. finmarchicus
Match: gi|592926551|gb|GAXK01031894.1| (TSA: Calanus finmarchicus comp20855_c10_seq3 transcribed RNA sequence) HSP 1 Score: 27.7202 bits (60), Expect = 4.969e+0 Identity = 12/35 (34.29%), Postives = 20/35 (57.14%), Query Frame = 0 Query: 48 HFSIKGNQELGIRLARIIKEKKLFGGKNATDLVLI 82 HF ++ N++ +ARI+K K F A +L+ I Sbjct: 1544 HFPLRRNKDQKYPVARILKLKYTFPASQARNLIFI 1648
BLAST of EMLSAG00000001192 vs. L. salmonis peptides
Match: EMLSAP00000001192 (pep:novel supercontig:LSalAtl2s:LSalAtl2s119:433027:440481:-1 gene:EMLSAG00000001192 transcript:EMLSAT00000001192 description:"maker-LSalAtl2s119-snap-gene-4.17") HSP 1 Score: 178.333 bits (451), Expect = 2.762e-59 Identity = 86/86 (100.00%), Postives = 86/86 (100.00%), Query Frame = 0 Query: 1 MLQSDDLHTRWMAINEFLQKESEVNERMKYISFPFGLKDSNLYDDGTHFSIKGNQELGIRLARIIKEKKLFGGKNATDLVLIFPLR 86 MLQSDDLHTRWMAINEFLQKESEVNERMKYISFPFGLKDSNLYDDGTHFSIKGNQELGIRLARIIKEKKLFGGKNATDLVLIFPLR Sbjct: 1 MLQSDDLHTRWMAINEFLQKESEVNERMKYISFPFGLKDSNLYDDGTHFSIKGNQELGIRLARIIKEKKLFGGKNATDLVLIFPLR 86 The following BLAST results are available for this feature:
BLAST of EMLSAG00000001192 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO) Total hits: 0
BLAST of EMLSAG00000001192 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA) Total hits: 12
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BLAST of EMLSAG00000001192 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self) Total hits: 1
BLAST of EMLSAG00000001192 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt) Total hits: 0
BLAST of EMLSAG00000001192 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods) Total hits: 0
BLAST of EMLSAG00000001192 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017)) Total hits: 0
BLAST of EMLSAG00000001192 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins) Total hits: 0
Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Cross References
External references for this gene
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at LSalAtl2s119:433027..440481- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>EMLSAG00000001192-683958 ID=EMLSAG00000001192-683958|Name=EMLSAG00000001192|organism=Lepeophtheirus salmonis|type=gene|length=7455bp|location=Sequence derived from alignment at LSalAtl2s119:433027..440481- (Lepeophtheirus salmonis)back to top Add to Basket
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