EMLSAG00000001273, EMLSAG00000001273-684039 (gene) Lepeophtheirus salmonis

Overview
NameEMLSAG00000001273
Unique NameEMLSAG00000001273-684039
Typegene
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Homology
[Close]
BLAST of EMLSAG00000001273 vs. C. finmarchicus
Match: gi|592829647|gb|GAXK01127897.1| (TSA: Calanus finmarchicus comp3657701_c0_seq2 transcribed RNA sequence)

HSP 1 Score: 39.6614 bits (91), Expect = 3.058e-3
Identity = 25/86 (29.07%), Postives = 41/86 (47.67%), Query Frame = 0 
Query:   75 MKAFSRYLEDTWIGT-----FSNEPLFSQLSWNQYDACHAGIPRSSNMLEGWHHGFQSLFNCAXPTIWKLMDGIKLEQAITDNKIV 155
            +  F  YLE  WIGT        +P F+  +W+  ++   G   S+N  E W +    L   A P++W+L+  +K E A    K++
Sbjct:  186 LSQFVSYLEANWIGTPRIDAPRKKPRFAISTWSINESLLEGTEFSTNSSESW-NSVTKLSVVAKPSLWQLIIQLKAEDASARAKVM 440
[Close]
BLAST of EMLSAG00000001273 vs. C. finmarchicus
Match: gi|592829648|gb|GAXK01127896.1| (TSA: Calanus finmarchicus comp3657701_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 38.5058 bits (88), Expect = 6.668e-3
Identity = 25/86 (29.07%), Postives = 41/86 (47.67%), Query Frame = 0 
Query:   75 MKAFSRYLEDTWIGT-----FSNEPLFSQLSWNQYDACHAGIPRSSNMLEGWHHGFQSLFNCAXPTIWKLMDGIKLEQAITDNKIV 155
            +  F  YLE  WIGT        +P F+  +W+  ++   G   S+N  E W+     L   A P++W+L+  +K E A    K++
Sbjct:  186 LSQFVSYLEANWIGTPRIDAPRKKPRFAISTWSINESLLEGTEFSTNSSESWNS-VTKLSVVAKPSLWQLIIQLKAEDASARAKVM 440
[Close]
BLAST of EMLSAG00000001273 vs. C. finmarchicus
Match: gi|592949738|gb|GAXK01008815.1| (TSA: Calanus finmarchicus comp938886_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 31.9574 bits (71), Expect = 1.238e+0
Identity = 24/98 (24.49%), Postives = 40/98 (40.82%), Query Frame = 0 
Query:   75 MKAFSRYLEDTWIGTFSNEPLFSQLSWNQYDA----CH------AGIPRSSNMLEGWHHGFQSLFNCAXPTIWKLMDGIKLEQAITDNKIVQHLRRQP 162
            +++F +    +  GTFS  P    + W QY A    C+      A +       E + +G   L   A P  WK+++G+     + DN    +L   P
Sbjct:  862 LESFRKSPNRSIDGTFSTTPFCGTIGWAQYLALLHQCNGVWLSTAYVLLPDKTKESYVNGLNLLRKAAIPPGWKVVEGLP-NHIVKDNTDASYLSSIP 1152
[Close]
BLAST of EMLSAG00000001273 vs. C. finmarchicus
Match: gi|592952788|gb|GAXK01005765.1| (TSA: Calanus finmarchicus comp2809718_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 30.8018 bits (68), Expect = 2.496e+0
Identity = 24/107 (22.43%), Postives = 42/107 (39.25%), Query Frame = 0 
Query:   78 FSRYLEDTWIGTFSNE--PLFSQLSWNQYDACHAGIPRSSNMLEGWHHGFQSLFNCAXPTIWKLMDGIKLEQAITDNKIVQHLRRQPPYP-RKRKLIQFDYQLKTIV 181
            F +YL   +     N   P +    W+ Y     G  R+++ LE WH   Q +     P     +  I  E       I +HL +   +   K+ ++  + ++K IV
Sbjct:  338 FDKYLVRGYTNAAGNHVPPRWGPEMWSVYSKVLEGRTRTTDKLEAWHRRLQEIIIRPHPDFDTFLKVICEEWIFIKTNIKKHLAKLKTFEVAKKTMLDREERIKRIV 658
[Close]
BLAST of EMLSAG00000001273 vs. C. finmarchicus
Match: gi|592760743|gb|GAXK01193670.1| (TSA: Calanus finmarchicus comp496901_c0_seq2 transcribed RNA sequence)

HSP 1 Score: 28.8758 bits (63), Expect = 1.000e+1
Identity = 20/76 (26.32%), Postives = 30/76 (39.47%), Query Frame = 0 
Query:   53 PFVLLGQMDRDWXLLKPTLLLDMKAFSRYLEDTWIGTFSNEPLFSQLSWNQYDACHAGIPRSSNMLEGWHHGFQSL 128
            P   +G   R    L  +LL  ++     LED W    S       L WN        + ++  +L+ W  GF+SL
Sbjct:  472 PTYSMGIKYRSPAKLSRSLLRSLEYKKAKLEDIWDADISINNENFDLIWNVSKCLKITLKKNVQILDAWQSGFESL 699
[Close]
BLAST of EMLSAG00000001273 vs. L. salmonis peptides
Match: EMLSAP00000001273 (pep:novel supercontig:LSalAtl2s:LSalAtl2s120:217853:218407:-1 gene:EMLSAG00000001273 transcript:EMLSAT00000001273 description:"augustus_masked-LSalAtl2s120-processed-gene-2.0")

HSP 1 Score: 375.17 bits (962), Expect = 1.063e-133
Identity = 184/184 (100.00%), Postives = 184/184 (100.00%), Query Frame = 0 
Query:    1 MGFWTRRIGSSLVPLKWSRLFLNNLLLFMDCLLKAVLFQQFMVSFLGKTQALPFVLLGQMDRDWXLLKPTLLLDMKAFSRYLEDTWIGTFSNEPLFSQLSWNQYDACHAGIPRSSNMLEGWHHGFQSLFNCAXPTIWKLMDGIKLEQAITDNKIVQHLRRQPPYPRKRKLIQFDYQLKTIVEQL 184
            MGFWTRRIGSSLVPLKWSRLFLNNLLLFMDCLLKAVLFQQFMVSFLGKTQALPFVLLGQMDRDWXLLKPTLLLDMKAFSRYLEDTWIGTFSNEPLFSQLSWNQYDACHAGIPRSSNMLEGWHHGFQSLFNCAXPTIWKLMDGIKLEQAITDNKIVQHLRRQPPYPRKRKLIQFDYQLKTIVEQL
Sbjct:    1 MGFWTRRIGSSLVPLKWSRLFLNNLLLFMDCLLKAVLFQQFMVSFLGKTQALPFVLLGQMDRDWXLLKPTLLLDMKAFSRYLEDTWIGTFSNEPLFSQLSWNQYDACHAGIPRSSNMLEGWHHGFQSLFNCAXPTIWKLMDGIKLEQAITDNKIVQHLRRQPPYPRKRKLIQFDYQLKTIVEQL 184
[Close]
BLAST of EMLSAG00000001273 vs. L. salmonis peptides
Match: EMLSAP00000011124 (pep:novel supercontig:LSalAtl2s:LSalAtl2s755:122472:146910:1 gene:EMLSAG00000011124 transcript:EMLSAT00000011124 description:"snap_masked-LSalAtl2s755-processed-gene-1.11")

HSP 1 Score: 162.54 bits (410), Expect = 5.521e-50
Identity = 76/120 (63.33%), Postives = 89/120 (74.17%), Query Frame = 0 
Query:   62 RDWXLLKPTLLLDMKAFSRYLEDTWIGTFSNEPLFSQLSWNQYDACHAGIPRSSNMLEGWHHGFQSLFNCAXPTIWKLMDGIKLEQAITDNKIVQHLRRQPPYPRKRKLIQFDYQLKTIV 181
            R    LKPTL  D + FSRY EDTWIGT S    F++ +WNQYDACHAGIPRSSN++EGW+HGFQSL NCA PTIW  M+ I+LE  + DNKI QHL R+ P  +KRK IQF  QLKTI+
Sbjct:   55 RALRFLKPTLSSDTEVFSRYFEDTWIGTSSAYLFFNKCAWNQYDACHAGIPRSSNIVEGWYHGFQSLVNCAEPTIWNPMNTIRLEHVLIDNKICQHLFRKSPPSKKRKWIQFYLQLKTII 174
[Close]
BLAST of EMLSAG00000001273 vs. L. salmonis peptides
Match: EMLSAP00000005547 (pep:novel supercontig:LSalAtl2s:LSalAtl2s297:424290:425573:-1 gene:EMLSAG00000005547 transcript:EMLSAT00000005547 description:"augustus_masked-LSalAtl2s297-processed-gene-4.3")

HSP 1 Score: 61.6178 bits (148), Expect = 6.146e-12
Identity = 40/148 (27.03%), Postives = 65/148 (43.92%), Query Frame = 0 
Query:   14 PLKWSRLFLNNLLLFMDCLLKAVLFQQFMVSFLGKTQALPFVLLGQMDRDWXLLKPTLLLDMKAFSRYLEDTWIGTFS-----NEPLFSQLSWNQYDACHAGIPRSSNMLEGWHHGFQSLFNCAXPTIWKLMDGIKLEQAITDNKIVQ 156
            PL  SR      ++F + +       +F++   G   A+ FV + Q    +  L  T+    +    Y EDT+IG         EP F    WN  D    G+ R+ N +EGW+  FQ       P +W+ +D +  EQ++ D+ I +
Sbjct:   98 PLPQSR----KEIVFPEIMKSTPTGDKFLIYDSGMLSAIAFVPVDQTIEVFEALSETMPDIGQPIIDYFEDTYIGRLQLQERRQEPSFLHTIWNVRDRIIDGLSRNDNSVEGWYRHFQVNIGSQHPNLWEFIDILHREQSLNDDVITR 241
[Close]
BLAST of EMLSAG00000001273 vs. L. salmonis peptides
Match: EMLSAP00000008977 (pep:novel supercontig:LSalAtl2s:LSalAtl2s560:196643:207767:1 gene:EMLSAG00000008977 transcript:EMLSAT00000008977 description:"snap_masked-LSalAtl2s560-processed-gene-1.5")

HSP 1 Score: 59.6918 bits (143), Expect = 4.782e-11
Identity = 29/74 (39.19%), Postives = 37/74 (50.00%), Query Frame = 0 
Query:   81 YLEDTWIGTFSNE-----PLFSQLSWNQYDACHAGIPRSSNMLEGWHHGFQSLFNCAXPTIWKLMDGIKLEQAI 149
            YLED WIG  +       P FS   WN Y A   G  +++N  +GWH  F  L   + P IWK +D +K E  I
Sbjct:   95 YLEDIWIGRPTGNITQRPPRFSHALWNCYAAAREGGSKTNNSCKGWHCSFNELVRASHPAIWKFLDILKNESLI 168
[Close]
BLAST of EMLSAG00000001273 vs. L. salmonis peptides
Match: EMLSAP00000005767 (pep:novel supercontig:LSalAtl2s:LSalAtl2s30:850469:898828:1 gene:EMLSAG00000005767 transcript:EMLSAT00000005767 description:"augustus-LSalAtl2s30-processed-gene-9.8")

HSP 1 Score: 55.4546 bits (132), Expect = 5.645e-10
Identity = 28/92 (30.43%), Postives = 44/92 (47.83%), Query Frame = 0 
Query:   64 WXLLKPTLLLDMKAFSRYLEDTWIGTF----SNEPLFSQLSWNQYDACHAGIPRSSNMLEGWHHGFQSLFNCAXPTIWKLMDGIKLEQAITD 151
            + +L  T   D++ F+ Y ED +IG +      EP +    WN       G+PR +N +E WH  FQ    C  P++WK +  I  E  + +
Sbjct:  153 FEILTETFPEDLRVFADYFEDNYIGRYMGRTGREPRYPLALWNI--RSEEGLPRINNSIESWHMVFQHSMQCKHPSLWKFLQTIIKENGLQE 242
[Close]
BLAST of EMLSAG00000001273 vs. Select Arthropod Genomes
Match: gb|KFM58704.1| (hypothetical protein X975_17494, partial [Stegodyphus mimosarum])

HSP 1 Score: 59.3066 bits (142), Expect = 7.333e-10
Identity = 27/71 (38.03%), Postives = 41/71 (57.75%), Query Frame = 0 
Query:   78 FSRYLEDTWIGTFSNEPLFSQLSWNQYDACHAGIPRSSNMLEGWHHGFQSLFNCAXPTIWKLMDGIKLEQA 148
            F+ Y+E    G    EP F    WN Y+A     P+++N  EG+H+   SLF+C+ P+IW L DG++ + A
Sbjct:  469 FTTYIE----GAAGREPQFPMRLWNHYEAALERSPKTTNCCEGFHNSLNSLFHCSHPSIWFLFDGLQRDLA 535
[Close]
BLAST of EMLSAG00000001273 vs. Select Arthropod Genomes
Match: gb|EEC03091.1| (hypothetical protein IscW_ISCW002834 [Ixodes scapularis])

HSP 1 Score: 53.5286 bits (127), Expect = 1.586e-8
Identity = 32/137 (23.36%), Postives = 65/137 (47.45%), Query Frame = 0 
Query:   51 ALPFVLLGQMDRDWXLLKPTLLLDMKAFSRYLEDTWIGTFS----NEPLFSQLSWNQYDACHAGIPRSSNMLEGWHHGFQSLFNCAXPTIWKLMDGIKLEQAITDNKIVQHLRRQPPYPRKRKLIQFDYQLKTIVEQ 183
            AL  V    ++  +  L  ++  ++     Y ED +IG  +     +  F    WN +D    G  +++N +E WH  FQ+   C+ PT+W+ ++ ++ E A+  +++ + L     + +  K  +   +LKT+  Q
Sbjct:    4 ALAIVPQDDVEGAFTELASSIRAELLPVVDYFEDVFIGRLTARGRRDAQFPIKLWNHHDTVLQGGSKTTNSVEAWHRSFQAHVQCSHPTLWRFLEVLQREDALQLHRLGR-LEMGQRFKQASKYAKAAERLKTLARQ 139
[Close]
BLAST of EMLSAG00000001273 vs. nr
Match: gi|749716840|gb|KII65317.1| (hypothetical protein RF11_02737 [Thelohanellus kitauei])

HSP 1 Score: 73.1738 bits (178), Expect = 1.023e-12
Identity = 33/91 (36.26%), Postives = 53/91 (58.24%), Query Frame = 0 
Query:   68 KPTLLLDMKAFSRYLEDTWIGTFSN----EPLFSQLSWNQYDACHAGIPRSSNMLEGWHHGFQSLFNCAXPTIWKLMDGIKLEQAITDNKI 154
            +  ++ + +    Y ED +IG F      +P+F    WNQY+     +PR++N LEGWH+GF  L NC+ P I++ +  +K EQ++ D KI
Sbjct:  108 QENVIEEFRPLLNYFEDNYIGRFGRLSRADPIFPISYWNQYNRVIENLPRTNNNLEGWHNGFNMLVNCSHPHIFQFLSSLKDEQSLIDVKI 198
[Close]
BLAST of EMLSAG00000001273 vs. nr
Match: gi|1101347099|ref|XP_018899373.1| (PREDICTED: uncharacterized protein LOC109031966 [Bemisia tabaci])

HSP 1 Score: 73.9442 bits (180), Expect = 1.070e-12
Identity = 46/144 (31.94%), Postives = 75/144 (52.08%), Query Frame = 0 
Query:   51 ALPFVLLGQMDRDWXLLKPTLLLDMKAFSRYLEDTWIGTFSNE----------PLFSQLSWNQYDACHAGIPRSSNMLEGWHHGFQSLFNCAXPTIWKLMDGIKLEQAITDNKIVQ-HLRRQPPYPRKRKLIQFDYQLKTIVEQ 183
            AL FV    + R + +LKPTL   M+  ++Y + T++   S E          P +S + WN Y +     PR++N  EGWH+ FQSL     P+I+ L+     EQ  T+ +I++    R+   PR+ K  + + +L+TIV +
Sbjct:  112 ALAFVPAEDVSRVFNMLKPTLPQSMEELAKYFDRTYVNG-SRELVRRRYRVQPPRYSPVLWNHYQSVLHDGPRTNNATEGWHNRFQSLVGKNHPSIYYLLRQFLKEQVDTEKQIIEIQAGRKVRKPREAKYERLNIRLRTIVSR 254
[Close]
BLAST of EMLSAG00000001273 vs. nr
Match: gi|1101358910|ref|XP_018905713.1| (PREDICTED: uncharacterized protein LOC109036188 [Bemisia tabaci])

HSP 1 Score: 75.0998 bits (183), Expect = 1.106e-12
Identity = 46/144 (31.94%), Postives = 75/144 (52.08%), Query Frame = 0 
Query:   51 ALPFVLLGQMDRDWXLLKPTLLLDMKAFSRYLEDTWIGTFSNE----------PLFSQLSWNQYDACHAGIPRSSNMLEGWHHGFQSLFNCAXPTIWKLMDGIKLEQAITDNKIVQ-HLRRQPPYPRKRKLIQFDYQLKTIVEQ 183
            AL FV    + R + +LKPTL   M+  ++Y + T++   S E          P +S + WN Y +     PR++N  EGWH+ FQSL     P+I+ L+     EQ  T+ +I++    R+   PR+ K  + + +L+TIV +
Sbjct:  214 ALAFVPAEDVSRVFNMLKPTLPQSMEELAKYFDRTYVNG-SRELVRRRYRVQPPRYSPVLWNHYQSVLHDEPRTNNATEGWHNRFQSLIGKNHPSIYYLLRQFLKEQVDTEKQIIEIQAGRKVRKPREAKYERLNIRLRTIVSR 356
[Close]
BLAST of EMLSAG00000001273 vs. nr
Match: gi|749726968|gb|KII72647.1| (hypothetical protein RF11_10389 [Thelohanellus kitauei])

HSP 1 Score: 73.559 bits (179), Expect = 1.358e-12
Identity = 43/142 (30.28%), Postives = 69/142 (48.59%), Query Frame = 0 
Query:   51 ALPFVLLGQMDRDWXLLKPTLLLD-----MKAFSRYLEDTWIGTFSNE----PLFSQLSWNQYDACHAGIPRSSNMLEGWHHGFQSLFNCAXPTIWKLMDGIKLEQAITDNKIVQHLRRQPPYPRKRKLIQFDYQLKTIVEQ 183
            AL F  +  + R + +++  L  +     +  F  Y EDT+IG F+ +    P F    WNQ D     +PR++N +EGWH  F S+ +C  P I+  +  +K EQ+++DNKI   +       R  +      QLK  +E 
Sbjct:   87 ALAFCPVNDVVRYFEIIEDVLREEGSCEILNEFIMYFEDTFIGRFTRQGRVQPRFGISLWNQRDRTINDLPRTNNHIEGWHRAFSSMISCNHPNIFTFLLFLKKEQSLSDNKIDGAILNSANNHRNTRYEIISSQLKATIEN 228
[Close]
BLAST of EMLSAG00000001273 vs. nr
Match: gi|749724475|gb|KII70929.1| (hypothetical protein RF11_13186 [Thelohanellus kitauei])

HSP 1 Score: 73.1738 bits (178), Expect = 1.568e-12
Identity = 43/142 (30.28%), Postives = 69/142 (48.59%), Query Frame = 0 
Query:   51 ALPFVLLGQMDRDWXLLKPTLLLD-----MKAFSRYLEDTWIGTFSNE----PLFSQLSWNQYDACHAGIPRSSNMLEGWHHGFQSLFNCAXPTIWKLMDGIKLEQAITDNKIVQHLRRQPPYPRKRKLIQFDYQLKTIVEQ 183
            AL F  +  + R + +++  L  +     +  F  Y EDT+IG F+ +    P F    WNQ D     +PR++N +EGWH  F S+ +C  P I+  +  +K EQ+++DNKI   +       R  +      QLK  +E 
Sbjct:   87 ALAFCPVNDVVRYFEIIEDVLREEGSYEILSEFIMYFEDTFIGRFTRQGRVQPRFGISLWNQRDRTINDLPRTNNHIEGWHRAFSSMISCNHPNIFTFLLFLKKEQSLSDNKIDGAILNSANNHRNTRYEIISSQLKATIEN 228
[Close]
BLAST of EMLSAG00000001273 vs. nr
Match: gi|641652086|ref|XP_008178247.1| (PREDICTED: uncharacterized protein LOC103307754 [Acyrthosiphon pisum])

HSP 1 Score: 69.3218 bits (168), Expect = 3.784e-12
Identity = 30/56 (53.57%), Postives = 39/56 (69.64%), Query Frame = 0 
Query:  101 WNQYDACHAGIPRSSNMLEGWHHGFQSLFNCAXPTIWKLMDGIKLEQAITDNKIVQ 156
            WNQYDA  A +P+++N +EGWH  F SL   + PTIW+L+D IK EQ  T+ KI Q
Sbjct:   16 WNQYDATLADLPKTNNSVEGWHRAFSSLLGASHPTIWRLIDTIKKEQGSTEIKINQ 71
[Close]
BLAST of EMLSAG00000001273 vs. nr
Match: gi|391348333|ref|XP_003748402.1| (PREDICTED: uncharacterized protein LOC100901000 [Galendromus occidentalis])

HSP 1 Score: 73.1738 bits (178), Expect = 4.748e-12
Identity = 37/110 (33.64%), Postives = 60/110 (54.55%), Query Frame = 0 
Query:   80 RYLEDTWIGTFS----NEPLFSQLSWNQYDACHAGIPRSSNMLEGWHHGFQSLFNCAXPTIWKLMDGIKLEQAITDNKIVQHLRRQPPYPRKRKLIQ-FDYQLKTIVEQL 184
            +Y   TW+G+ +      P+F +  WN Y +  + +PR++N +E WH GF SL  C  P+IWK ++ IK + +IT  +  Q L      PRKR+  +  +  LK + E+ 
Sbjct:  242 QYFRKTWVGSRTANDQKRPIFVEELWNCYGSLQSDLPRTNNAVEAWHRGFDSLIMCCNPSIWKFIEAIKKDNSITKLRCDQ-LDAGFDRPRKRRCYKDVEKNLKVVAEKF 350
[Close]
BLAST of EMLSAG00000001273 vs. nr
Match: gi|749707630|gb|KII60738.1| (hypothetical protein RF11_10967 [Thelohanellus kitauei])

HSP 1 Score: 73.1738 bits (178), Expect = 5.574e-12
Identity = 43/142 (30.28%), Postives = 69/142 (48.59%), Query Frame = 0 
Query:   51 ALPFVLLGQMDRDWXLLKPTLLLD-----MKAFSRYLEDTWIGTFSNE----PLFSQLSWNQYDACHAGIPRSSNMLEGWHHGFQSLFNCAXPTIWKLMDGIKLEQAITDNKIVQHLRRQPPYPRKRKLIQFDYQLKTIVEQ 183
            AL F  +  + R + +++  L  +     +  F  Y EDT+IG F+ +    P F    WNQ D     +PR++N +EGWH  F S+ +C  P I+  +  +K EQ+++DNKI   +       R  +      QLK  +E 
Sbjct:  386 ALAFCPVNDVVRYFEIIEDVLREEGSYEILSEFIMYFEDTFIGRFTRQGRVQPRFGISLWNQRDRTINDLPRTNNHIEGWHRAFSSMISCNHPNIFTFLLFLKKEQSLSDNKIDGAILNSANNHRNTRYEIISSQLKATIEN 527
[Close]
BLAST of EMLSAG00000001273 vs. nr
Match: gi|749729166|gb|KII74199.1| (hypothetical protein RF11_00573 [Thelohanellus kitauei])

HSP 1 Score: 72.7886 bits (177), Expect = 7.012e-12
Identity = 44/138 (31.88%), Postives = 69/138 (50.00%), Query Frame = 0 
Query:   51 ALPFVLLGQMDRDWXLLKPTLLLDMKAFSRYLEDTWIGTFS----NEPLFSQLSWNQYDACHAGIPRSSNMLEGWHHGFQSLFNCAXPTIWKLMDGIKLEQAITD---NKIVQHLRRQPPYPRKRKLIQFDYQLKTIV 181
            AL F+    +   +  L  +   ++     Y EDT+IG       ++PLF    WN       G+PR++N +EGWH+ FQS   C  PTI+KL++  +LEQ + +   ++I   +  QP    K K IQ   +L  I+
Sbjct:  304 ALSFIPPEDVGTAFDELSESRPANLHNLYNYWEDTYIGRMRRNRRDDPLFPISMWNMRGRVADGLPRTNNSVEGWHNAFQSSVGCHHPTIYKLIENFRLEQDLAEQTISRISSGINTQP--ASKSKYIQLSRRLAAIL 439
[Close]
BLAST of EMLSAG00000001273 vs. nr
Match: gi|749719436|gb|KII67229.1| (hypothetical protein RF11_13865 [Thelohanellus kitauei])

HSP 1 Score: 72.7886 bits (177), Expect = 8.254e-12
Identity = 44/138 (31.88%), Postives = 69/138 (50.00%), Query Frame = 0 
Query:   51 ALPFVLLGQMDRDWXLLKPTLLLDMKAFSRYLEDTWIGTFS----NEPLFSQLSWNQYDACHAGIPRSSNMLEGWHHGFQSLFNCAXPTIWKLMDGIKLEQAITD---NKIVQHLRRQPPYPRKRKLIQFDYQLKTIV 181
            AL F+    +   +  L  +   ++     Y EDT+IG       ++PLF    WN       G+PR++N +EGWH+ FQS   C  PTI+KL++  +LEQ + +   ++I   +  QP    K K IQ   +L  I+
Sbjct:  296 ALSFIPPEDVGTAFDELSESRPANLHNLYNYWEDTYIGRMRRNRRDDPLFPISMWNMRGRVADGLPRTNNSVEGWHNAFQSSVGCHHPTIYKLIENFRLEQDLAEQTISRISSGINTQP--ASKSKYIQLSRRLAAIL 431
The following BLAST results are available for this feature:
BLAST of EMLSAG00000001273 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000001273 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA)
Total hits: 5
Match NameE-valueIdentityDescription
gi|592829647|gb|GAXK01127897.1|3.058e-329.07TSA: Calanus finmarchicus comp3657701_c0_seq2 tran... [more]
gi|592829648|gb|GAXK01127896.1|6.668e-329.07TSA: Calanus finmarchicus comp3657701_c0_seq1 tran... [more]
gi|592949738|gb|GAXK01008815.1|1.238e+024.49TSA: Calanus finmarchicus comp938886_c0_seq1 trans... [more]
gi|592952788|gb|GAXK01005765.1|2.496e+022.43TSA: Calanus finmarchicus comp2809718_c0_seq1 tran... [more]
gi|592760743|gb|GAXK01193670.1|1.000e+126.32TSA: Calanus finmarchicus comp496901_c0_seq2 trans... [more]
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BLAST of EMLSAG00000001273 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self)
Total hits: 5
Match NameE-valueIdentityDescription
EMLSAP000000012731.063e-133100.00pep:novel supercontig:LSalAtl2s:LSalAtl2s120:21785... [more]
EMLSAP000000111245.521e-5063.33pep:novel supercontig:LSalAtl2s:LSalAtl2s755:12247... [more]
EMLSAP000000055476.146e-1227.03pep:novel supercontig:LSalAtl2s:LSalAtl2s297:42429... [more]
EMLSAP000000089774.782e-1139.19pep:novel supercontig:LSalAtl2s:LSalAtl2s560:19664... [more]
EMLSAP000000057675.645e-1030.43pep:novel supercontig:LSalAtl2s:LSalAtl2s30:850469... [more]
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BLAST of EMLSAG00000001273 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000001273 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods)
Total hits: 2
Match NameE-valueIdentityDescription
gb|KFM58704.1|7.333e-1038.03hypothetical protein X975_17494, partial [Stegodyp... [more]
gb|EEC03091.1|1.586e-823.36hypothetical protein IscW_ISCW002834 [Ixodes scapu... [more]
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BLAST of EMLSAG00000001273 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017))
Total hits: 25
Match NameE-valueIdentityDescription
gi|749716840|gb|KII65317.1|1.023e-1236.26hypothetical protein RF11_02737 [Thelohanellus kit... [more]
gi|1101347099|ref|XP_018899373.1|1.070e-1231.94PREDICTED: uncharacterized protein LOC109031966 [B... [more]
gi|1101358910|ref|XP_018905713.1|1.106e-1231.94PREDICTED: uncharacterized protein LOC109036188 [B... [more]
gi|749726968|gb|KII72647.1|1.358e-1230.28hypothetical protein RF11_10389 [Thelohanellus kit... [more]
gi|749724475|gb|KII70929.1|1.568e-1230.28hypothetical protein RF11_13186 [Thelohanellus kit... [more]
gi|641652086|ref|XP_008178247.1|3.784e-1253.57PREDICTED: uncharacterized protein LOC103307754 [A... [more]
gi|391348333|ref|XP_003748402.1|4.748e-1233.64PREDICTED: uncharacterized protein LOC100901000 [G... [more]
gi|749707630|gb|KII60738.1|5.574e-1230.28hypothetical protein RF11_10967 [Thelohanellus kit... [more]
gi|749729166|gb|KII74199.1|7.012e-1231.88hypothetical protein RF11_00573 [Thelohanellus kit... [more]
gi|749719436|gb|KII67229.1|8.254e-1231.88hypothetical protein RF11_13865 [Thelohanellus kit... [more]

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BLAST of EMLSAG00000001273 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s120supercontigLSalAtl2s120:217853..218407 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Blast vs. GO2014-04-02
TblastN vs C. finmarchicus TSA2014-05-09
Blastp vs. self2014-05-10
Blastp vs. SwissProt2017-02-10
Blastp vs. Selected Arthropods2017-02-20
Blastp vs. NR (2/2017)2017-02-20
Blastp vs. Tigriopus kingsejongensis proteins2018-04-18
Properties
Property NameValue
Logic nameensemblgenomes
Descriptionaugustus_masked-LSalAtl2s120-processed-gene-2.0
Biotypeprotein_coding
EvidenceIEA
NotePREDICTED: uncharacterized protein LOC103311885 [Acyrthosiphon pisum]
Cross References
External references for this gene
DatabaseAccession
Ensembl Metazoa (gene)EMLSAG00000001273 (primary cross-reference)
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
EMLSAT00000001273EMLSAT00000001273-697120Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at LSalAtl2s120:217853..218407-

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAG00000001273-684039 ID=EMLSAG00000001273-684039|Name=EMLSAG00000001273|organism=Lepeophtheirus salmonis|type=gene|length=555bp|location=Sequence derived from alignment at LSalAtl2s120:217853..218407- (Lepeophtheirus salmonis)
ATGGGCTTCTGGACACGTCGAATTGGATCATCGTTGGTACCTTTAAAGTG
GAGCCGTCTCTTTTTAAACAACTTGTTACTGTTCATGGACTGCTTACTCA
AGGCCGTTCTATTCCAGCAGTTTATGGTCTCCTTCCTGGGGAAAACTCAG
GCACTTCCCTTCGTCCTTCTTGGCCAAATGGATCGAGATTGGAGSCTCCT
MAAGCCGACTCTGCTATTAGATATGAAAGCTTTCTCAAGATATCTTGAAG
ATACTTGGATTGGGACCTTTTCAAACGAACCTCTATTCAGCCAGTTATCA
TGGAATCAGTACGATGCATGTCACGCTGGAATCCCACGATCCAGTAACAT
GTTGGAAGGCTGGCATCATGGTTTTCAGTCACTATTTAACTGTGCAGAMC
CTACCATATGGAAACTAATGGATGGCATTAAACTAGAACAGGCTATCACA
GATAATAAGATAGTGCAACACCTTAGACGACAACCTCCTTATCCTAGAAA
GAGGAAATTGATCCAATTTGATTATCAATTGAAGACTATTGTCGAACAAC
TATGA
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