EMLSAG00000001315, EMLSAG00000001315-684081 (gene) Lepeophtheirus salmonis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of EMLSAG00000001315 vs. C. finmarchicus
Match: gi|592895406|gb|GAXK01062969.1| (TSA: Calanus finmarchicus comp543472_c0_seq1 transcribed RNA sequence) HSP 1 Score: 30.4166 bits (67), Expect = 7.905e+0 Identity = 13/21 (61.90%), Postives = 15/21 (71.43%), Query Frame = 0 Query: 199 CISSGKPPIPSRVGVNRKINL 219 CI S KPPI SR VN K++L Sbjct: 741 CIKSPKPPIASREAVNAKLHL 803
BLAST of EMLSAG00000001315 vs. C. finmarchicus
Match: gi|592895401|gb|GAXK01062974.1| (TSA: Calanus finmarchicus comp543472_c0_seq6 transcribed RNA sequence) HSP 1 Score: 30.0314 bits (66), Expect = 8.103e+0 Identity = 13/21 (61.90%), Postives = 15/21 (71.43%), Query Frame = 0 Query: 199 CISSGKPPIPSRVGVNRKINL 219 CI S KPPI SR VN K++L Sbjct: 104 CIKSPKPPIASREAVNAKLHL 166
BLAST of EMLSAG00000001315 vs. C. finmarchicus
Match: gi|592895402|gb|GAXK01062973.1| (TSA: Calanus finmarchicus comp543472_c0_seq5 transcribed RNA sequence) HSP 1 Score: 30.4166 bits (67), Expect = 8.327e+0 Identity = 13/21 (61.90%), Postives = 15/21 (71.43%), Query Frame = 0 Query: 199 CISSGKPPIPSRVGVNRKINL 219 CI S KPPI SR VN K++L Sbjct: 741 CIKSPKPPIASREAVNAKLHL 803
BLAST of EMLSAG00000001315 vs. C. finmarchicus
Match: gi|592895400|gb|GAXK01062975.1| (TSA: Calanus finmarchicus comp543472_c0_seq7 transcribed RNA sequence) HSP 1 Score: 29.6462 bits (65), Expect = 9.615e+0 Identity = 13/21 (61.90%), Postives = 15/21 (71.43%), Query Frame = 0 Query: 199 CISSGKPPIPSRVGVNRKINL 219 CI S KPPI SR VN K++L Sbjct: 104 CIKSPKPPIASREAVNAKLHL 166
BLAST of EMLSAG00000001315 vs. L. salmonis peptides
Match: EMLSAP00000001315 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1222:63200:64511:1 gene:EMLSAG00000001315 transcript:EMLSAT00000001315 description:"maker-LSalAtl2s1222-augustus-gene-0.8") HSP 1 Score: 617.076 bits (1590), Expect = 0.000e+0 Identity = 307/307 (100.00%), Postives = 307/307 (100.00%), Query Frame = 0 Query: 1 MSSEEFRVQNLKEMEFEVSTLKRRFMASKDNQKKMKKYMQEQRDKTYDIISTVAQVLEQKENQIQELHTKKESELSKLSQELLFLQSNMLKEKSRLESIISELSTKVSSQDNEIKMLKKQLHQQRSHNNTTPTLNLRNDSPTSDLDTHSPSSEESSPKSTLYNKTTENSKISNLRASFLSNTINGGIENISSSLQIKPCISSGKPPIPSRVGVNRKINLRLKDKKVISVKDEGFFSSYEESSSYGGFNPKSTPHPATKRTXSFQHEPRVKSISNFGALEELNVTSTQLHGQQNEKTPTTIIRYLDYL 307 MSSEEFRVQNLKEMEFEVSTLKRRFMASKDNQKKMKKYMQEQRDKTYDIISTVAQVLEQKENQIQELHTKKESELSKLSQELLFLQSNMLKEKSRLESIISELSTKVSSQDNEIKMLKKQLHQQRSHNNTTPTLNLRNDSPTSDLDTHSPSSEESSPKSTLYNKTTENSKISNLRASFLSNTINGGIENISSSLQIKPCISSGKPPIPSRVGVNRKINLRLKDKKVISVKDEGFFSSYEESSSYGGFNPKSTPHPATKRTXSFQHEPRVKSISNFGALEELNVTSTQLHGQQNEKTPTTIIRYLDYL Sbjct: 1 MSSEEFRVQNLKEMEFEVSTLKRRFMASKDNQKKMKKYMQEQRDKTYDIISTVAQVLEQKENQIQELHTKKESELSKLSQELLFLQSNMLKEKSRLESIISELSTKVSSQDNEIKMLKKQLHQQRSHNNTTPTLNLRNDSPTSDLDTHSPSSEESSPKSTLYNKTTENSKISNLRASFLSNTINGGIENISSSLQIKPCISSGKPPIPSRVGVNRKINLRLKDKKVISVKDEGFFSSYEESSSYGGFNPKSTPHPATKRTXSFQHEPRVKSISNFGALEELNVTSTQLHGQQNEKTPTTIIRYLDYL 307
BLAST of EMLSAG00000001315 vs. L. salmonis peptides
Match: EMLSAP00000004780 (pep:novel supercontig:LSalAtl2s:LSalAtl2s251:1544475:1545708:1 gene:EMLSAG00000004780 transcript:EMLSAT00000004780 description:"maker-LSalAtl2s251-snap-gene-15.18") HSP 1 Score: 67.0106 bits (162), Expect = 2.364e-13 Identity = 38/96 (39.58%), Postives = 67/96 (69.79%), Query Frame = 0 Query: 22 KRRFMASKDNQKKMKKYMQEQRDKTYDIISTVAQVLEQKENQIQELHTKKESELSKLSQELLFLQSNMLKEKSRLESIISELSTKVSSQDNEIKML 117 KR+++ S+++ +++KK + EQR+ T II+ Q L+ K+ +Q+L+ K+ EL+K+S ELL+L+S +L E+ LE I S+K+ SQ++EI+ L Sbjct: 9 KRKYLKSQNSVQRIKKELFEQRELTQKIINAFQQELDVKDRHLQKLNRKRHRELTKISSELLYLKSKLLNEQKNLEIKIMNQSSKIISQEHEIRRL 104
BLAST of EMLSAG00000001315 vs. L. salmonis peptides
Match: EMLSAP00000009307 (pep:novel supercontig:LSalAtl2s:LSalAtl2s595:295853:296661:-1 gene:EMLSAG00000009307 transcript:EMLSAT00000009307 description:"maker-LSalAtl2s595-snap-gene-3.6") HSP 1 Score: 50.8322 bits (120), Expect = 2.537e-8 Identity = 30/89 (33.71%), Postives = 53/89 (59.55%), Query Frame = 0 Query: 14 MEFEVSTLKRRFMASKDNQKKMKKYMQEQRDKTYDIISTVAQVLEQKENQIQELHTKKESELSKLSQELLFLQSNMLKEKSRLESIISE 102 +E E + +F K +K+ +E+ K +I A L++KEN+IQ+L K++ EL+++ +EL FLQS ML E+ R+ ++S+ Sbjct: 9 VESEEDFWRNKFYDLKSRYANLKRESRERSSKARKLILATAIKLQEKENEIQKLKAKQDEELAEICRELTFLQSRMLFERKRISELLSD 97
BLAST of EMLSAG00000001315 vs. Select Arthropod Genomes
Match: gb|KFM68385.1| (Ras GTPase-activating protein SynGAP, partial [Stegodyphus mimosarum]) HSP 1 Score: 51.6026 bits (122), Expect = 8.765e-7 Identity = 35/125 (28.00%), Postives = 70/125 (56.00%), Query Frame = 0 Query: 13 EMEFEVSTLKRRFMASKDNQKKMKKYMQEQRDKTYDIISTVAQVLEQKENQIQELHTKKESELSKLSQELLFLQSNMLKEKSRLESIISELSTKVSSQDNEIKMLKKQLH-QQRSH---NNTTPT 133 E+E E+ L R M + +++K ++ Q KT ++ + +E+KE Q++ L +K+SE+ + +LL ++ + +E+SR+E ++ E ++ SQ EI+ L++ + Q H NT P+ Sbjct: 38 ELEAEILRLTTRLMMRERELRQVKNQLKSQVTKTQQQAASWRRRMEEKEEQMRVLLIQKDSEMQSIVSQLLLFEAELRQEQSRIEDLLGEKDAQILSQQKEIERLRRCVSGNQNGHSLDGNTMPS 162
BLAST of EMLSAG00000001315 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold1125_size61249-snap-gene-0.15 (protein:Tk00355 transcript:maker-scaffold1125_size61249-snap-gene-0.15-mRNA-1 annotation:"PREDICTED: hypothetical protein LOC100748446") HSP 1 Score: 73.559 bits (179), Expect = 5.367e-15 Identity = 49/160 (30.63%), Postives = 89/160 (55.62%), Query Frame = 0 Query: 13 EMEFEVSTLKRRFMASKDNQKKMKKYMQEQRDKTYDIISTVAQVLEQKENQIQELHTKKESELSKLSQELLFLQSNMLKEKSRLESIISELSTKVSSQDNEIKMLKKQLHQQRSHNNTTPTLNLRNDSPTSDLDTHSPSSEESSPKSTLYNKTTENSKIS 172 EME EV +LKRR++ +K K ++ M+E R K+ ++ A L++KE +I+E+ K +LS++ +EL L++N++KE+ RL + +S Q EI +LK + + ++ D+P+S +++ SP+S S PK + K + I+ Sbjct: 63 EMETEVMSLKRRYIETKQRYKALRTMMKENRMKSRQLMVQCALKLQEKEVEIEEIQKTKSEDLSRIGRELTHLRANLMKEQKRLCLHMKARDETISRQAKEIALLKARNEELERFAAKAAEVDRDMDTPSS-IESDSPNSSFSVPKFVIKPKEMDAPPIA 221 The following BLAST results are available for this feature:
BLAST of EMLSAG00000001315 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO) Total hits: 0
BLAST of EMLSAG00000001315 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA) Total hits: 4
BLAST of EMLSAG00000001315 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self) Total hits: 3
BLAST of EMLSAG00000001315 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt) Total hits: 0
BLAST of EMLSAG00000001315 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods) Total hits: 1
BLAST of EMLSAG00000001315 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017)) Total hits: 0
BLAST of EMLSAG00000001315 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins) Total hits: 1
Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Cross References
External references for this gene
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at LSalAtl2s1222:63200..64511+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>EMLSAG00000001315-684081 ID=EMLSAG00000001315-684081|Name=EMLSAG00000001315|organism=Lepeophtheirus salmonis|type=gene|length=1312bp|location=Sequence derived from alignment at LSalAtl2s1222:63200..64511+ (Lepeophtheirus salmonis)back to top Add to Basket
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