EMLSAG00000001335, EMLSAG00000001335-684101 (gene) Lepeophtheirus salmonis

Overview
NameEMLSAG00000001335
Unique NameEMLSAG00000001335-684101
Typegene
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Homology
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BLAST of EMLSAG00000001335 vs. L. salmonis peptides
Match: EMLSAP00000001335 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1223:264422:270594:-1 gene:EMLSAG00000001335 transcript:EMLSAT00000001335 description:"maker-LSalAtl2s1223-snap-gene-2.97")

HSP 1 Score: 447.973 bits (1151), Expect = 3.099e-161
Identity = 222/222 (100.00%), Postives = 222/222 (100.00%), Query Frame = 0 
Query:    1 SNISEKLISLSIFIKKGSLYRLLEKTRQHLSNIIMTDKFMSVIFMLLLGIVGILSADPLHLEHEGDSTSSADHIVRYLRSGHELLGSIPTKRPSQSRDLYRLLRTLRSSSDQIVGTSKYKNSESTANPPQKGFFLRTLRGNKGFFLRTLREDDSNKGFFLRTLRSDPQKGFFLRTLKRSNNNNEIASLEDLDGFEGDEDVYVGEDEKPWPHNVVFQRELPIF 222
            SNISEKLISLSIFIKKGSLYRLLEKTRQHLSNIIMTDKFMSVIFMLLLGIVGILSADPLHLEHEGDSTSSADHIVRYLRSGHELLGSIPTKRPSQSRDLYRLLRTLRSSSDQIVGTSKYKNSESTANPPQKGFFLRTLRGNKGFFLRTLREDDSNKGFFLRTLRSDPQKGFFLRTLKRSNNNNEIASLEDLDGFEGDEDVYVGEDEKPWPHNVVFQRELPIF
Sbjct:    1 SNISEKLISLSIFIKKGSLYRLLEKTRQHLSNIIMTDKFMSVIFMLLLGIVGILSADPLHLEHEGDSTSSADHIVRYLRSGHELLGSIPTKRPSQSRDLYRLLRTLRSSSDQIVGTSKYKNSESTANPPQKGFFLRTLRGNKGFFLRTLREDDSNKGFFLRTLRSDPQKGFFLRTLKRSNNNNEIASLEDLDGFEGDEDVYVGEDEKPWPHNVVFQRELPIF 222
The following BLAST results are available for this feature:
BLAST of EMLSAG00000001335 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000001335 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000001335 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self)
Total hits: 1
Match NameE-valueIdentityDescription
EMLSAP000000013353.099e-161100.00pep:novel supercontig:LSalAtl2s:LSalAtl2s1223:2644... [more]
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BLAST of EMLSAG00000001335 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000001335 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000001335 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017))
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000001335 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1223supercontigLSalAtl2s1223:264422..270594 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Blast vs. GO2014-04-02
TblastN vs C. finmarchicus TSA2014-05-09
Blastp vs. self2014-05-10
Blastp vs. SwissProt2017-02-10
Blastp vs. Selected Arthropods2017-02-20
Blastp vs. NR (2/2017)2017-02-20
Blastp vs. Tigriopus kingsejongensis proteins2018-04-18
Properties
Property NameValue
Logic nameensemblgenomes
Descriptionmaker-LSalAtl2s1223-snap-gene-2.97
Biotypeprotein_coding
EvidenceIEA
NoteHypothetical protein
Cross References
External references for this gene
DatabaseAccession
Ensembl Metazoa (gene)EMLSAG00000001335 (primary cross-reference)
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
EMLSAT00000001335EMLSAT00000001335-697182Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at LSalAtl2s1223:264422..270594-

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAG00000001335-684101 ID=EMLSAG00000001335-684101|Name=EMLSAG00000001335|organism=Lepeophtheirus salmonis|type=gene|length=6173bp|location=Sequence derived from alignment at LSalAtl2s1223:264422..270594- (Lepeophtheirus salmonis)
TCCAACATATCTGAAAAGCTCATCAGTTTGAGTATATTTATCAAGAAAGG
ATCTCTATATCGCCTCCTGGAGAAGACAAGACAGCATCTTTCTAATATAA
TTATGACTGACAAATTCATGTCCGTTATCTTTATGCTCTTACTGGGAATT
GTAGGGATTCTTTCCGCGGATCCTCTTCATTTAGAACACGAAGGAGATTC
CACTTCCTCTGCAGGTAATCCTAACCTTTCTTTTCTGGGGGCATCCATGA
AAAAGCATCACTCGAAGTCAAATTAAATAAAGGGGTTTCCTTAAGAGCAC
CTCAGCTATTTTTTTAAATAAAACACAAACAATTAAAGAGATCACCAAAT
TTATTTTTTCACTACAAATCACTCTAGCTTGATTATCAAGAGCATGTTTA
TAGAAGTCCAATCGCTGAACCCAATTTTCTACTACTTTTTTCAATAAATT
GACCGATATTGCATCAATTTTGAGCTCAATATTTTTTCTGAGCTCTGATA
ACGTCGTCGGGTTATTGGTGTAGACCAATGACTAAGAAAATAATCTAAAG
GGGTTAAATCCCACGATCGAGGTGGCTAATCAACTGGTCCATTTATCGAA
ATAACGCGCTTACCAAAATTGTTTTGCAATAAATCGATTGTAATTTTTGC
TGTATGACAAGTGGCGCCGTCTTGATGGAACCATATTTTTGCCAAGTCCA
TACCTTTCAATTGGGATAAAATAAAAATCATTTATCATGGTGCAATAGCA
ATTTATATTTCTACTACAATTTTTGCAATTTATACCCCATTTGGGGTAAT
TTAATCCTGTTCCGATACCACTGCTCTGAGACTATACACTCCTTTGAGGA
TTAGTACACACCCTCTTCCCTAGACAGAGTAGTCCAATGGGTTCGTGTCT
GAAGAGGAGGGCACCCCCATATTGAGGTCCCAAAAGTCTGTAAAGTTGTC
TCTCAAGAAGGCCTGGGTCTTAGCGGTGCAATAGCATGTAGTCTTTAGTG
AAAACAATGTTCTCTCCGAACTTTTATCTAGCCCAACGTAGCACTTTCTT
AACCAGTAGTTTGATGTCAGTATCTACATTGAGCCGCTCCTTCCTCTCCA
CAAAAATGGGAGGGCAGATTTCGCTTGTARTAGCCACTGGGCTTTTTGTT
CTGAAAACAATGTTCCACAATAATCATTTATTGTCATAATTCCTTCCTCA
TAAATTTGAATAGCGGGGTGCCCCTGCTTATAACGAAGGAATCATTGATG
TTTCTCAGGAACTGCTGAACAAAATGTGTTTGTCGGAAAATTGCTTCATT
TTTGTACAAATCTGGGTTCTGGCCTTAGAGAAAGCCTCTCATTTGTGAAA
CTTTTGCCAAGATGGTTTTCCTTTAACACTAAAAGGACCATCGGAACATT
ATTTCATTTCAAACAAATGTATAATTGAGCAGAAATACTTTGTTGAACAA
AAGTTTTACAACTTGTGTAGTAACGTACTATGCCAGATGTTATCACTTAA
CAGGGGCGTCCGTAAGGGGTGGGCAGGAGGGGTTGTAGTCCCCCTCAAAA
AAAAAAAGGAATCTGTACTTCTTACTGGGAAAATTAATATTCCATTTAAT
TTTTTCAAATCATTAATGGTATTAATCCTTTGACGGTGCATTAAATTGCA
ATTGAWGTAGCCACATTATGCCTCATACTCCGTAGACTGAAATATAAGCC
CCTCTTATATTATGGTAATAAAATTATAAAAAACTATCATTTGATGTAAA
CAAGCGTTTTTGTAGTTGTTGATAAGTTATTTCCTACTCACGGCGTTATC
TCGATAACACAAAATGTTTGTTGGCAGCTGTCGATTCCCTCTTCTCCCTT
GATACGTCATGGGMATTTCATAATTTATTCTTTTTCATAAATACACAAAG
TAATAAGTTATTCTATACTTATACACTGTTTACCAACAAGGACAGGAATA
CAATTTCTAGTTGATCCCTCGTCGTTCATATAAAATATATATCGGCCATT
TTATTATCTCTATGAAGAATGTTGGCTATTTCTTCATAGAAACTTATCCC
TCTAAGCAATATTATAATACAGTATCGAATAAAATACTATGTAGATTTTA
ATAATATGTAATTCATTTCAAAAATGGGGAAAAAAGAATATGACAGTCAT
AGTCTGCGAGTACATAAGAGATACATAGCTGTTGGTATCATTAACTTATT
TACTAACTACCAGATGATTTCGGGCCTTTTATATGTTTCCTTATGGAGGA
AAGGTATGCACGATACAATAAAGATTCCGACGTGTATTATGTCTTCTATT
AGTTATGTATAATCTTGAATAAGGGAGAGTTTCCCGTAATTATTTGATTG
ACACTAGACTAAGGATTTTTGAGCAATTTTTTCCGCCTAAATTATTGGTT
CACTAAAATTTTGGCAAAATGAGCAACCAAAATATCAAAATCGAGCGATT
TGTATTAAAAGAAAAATACAGTTTTATAATAATAATTTAGAGGAATAATT
ATGTTTATTTTATATTTATCAAAATTTCTTCATTAATTTTACTATCTTAT
ATTGACAAGTTAATATTTTATGTAGAAAGATTTTTTTCCGTTAATTTTTC
CCTATGATCAGTATTGGTAGTATCAAACATATTTAAAAAACGTCCACATT
AGTAGTTGAAGTAAATTTGAAGTTGGCGAGATCTTCAGGAGTCTTGTAAA
ATGGAGGAATCTCATTATCACCACCAATGATATTACGTCCAACCTTTGCA
TAAATGGATGATCGATTTGACGCAAATGTATTTCTCATTTGTGTCAAAAT
TTAATGGGGATTATTCAACAGTTAATTTTGCACCAAATTTATTCTTCCTT
TAATCGGATGTTGTCTGAATCTGAATCCCTCACACATCCAATCATGTAAT
TCATAACCCTGATAGTATCATATAGACATTTTACCTCCAAAAAGAGAGCC
TTATAAAGGAAGGTTTTGGCTGGMATATTTTTCCTCGAAAAATATCATTA
AATAATCATCAAAAGCTATTGTGAAATCTAACACAAACTTTGAATATTTA
TTTCATATGAATTTAGAAAAATGAAGCATCTTCACACACACACAAAAAGG
AGTTAAATGAATCATCTTGTCTATACATTATTTTAATTAACTTATGATGA
ATATAGTTTTTTTATGGCGTTCGCAGGGGGGGGGGGCTKCAGCCTCTCCK
GCCACCCCAAGAATCATGGCCTTTCTTAATTTTAGTAGGAATCTCTAGTG
TTGTGTCATTCCTTATTTATTCGGTACAGTCCAGTCTTAGAACATCTCCT
ATCAGTCCTTCGGACTATCAGTAATAGAACTGATTAAAAAAGTAGAAATA
AGGTTGGAACTTGCATCAAGAGCCCCTCTGCATAAGTCATACAAAGTAGG
ACTTCTGAATTCTTTCCATCAATTATATGCTTTTAATCAATTATAATTAT
CCTCAGTAATGATTTATTTCTGAGACAATTTGAGTGTTTTTGTCTCTCAT
AATTTAGATTAGTATTTGATTGAAAAAGGGGATTATGATTCTTCTTATTT
GATTGAGTCCATATAGTCATTGATAATCATAAATCATGATTAAGGCCTGT
ATAAATTTATATATTTTGTACTCGTAATTGAAAAGGAAATACAATTGGAA
AGGTTATGTTAGATTAGTGAGTAATTTTGTTAAGATAAATTGTATTTTTG
GGAAAGTATCAATACAAAAATGATTATTCCCAGTAGTTTGTTGATGGTCA
CAATGTTGTAACTACGGGGGTACTTAAGACTCCCAAAAAAGGATGTTTGT
CTCCCTCCGCACAACTGAAATATAAGTTTAAAAGTAAAATTATATCATAT
TAAAATGTAAAAAAAATAACCTCAATTTGTAGGCTTTAAAAATAAAATTA
TATCATATTAAAATGTAAAAAAAATAACACTTCAATTTGTAGGCTTTAAA
AGAAATTTCAAAAATAAATTAATTTAAATATCCTCTCAATCTAGTCAACC
CAAACAGAAAAGCTTTAGTCACAGCACTGGGCCTTTCTAGAATTTGAAAA
GTCCCTCCTAGGTTGGATACACCATGTCTAATTACAAGACTTTGTATAAA
GCAAGGTTAATAGAAATACAAGGTTCGACCATCATATAATCGGGCTTGCT
AGAATTTTCAATTTGATGTATCGTACCGACTGCTGGGCAAGACAGGCAGA
TTTTGACAAAGCACGCAACCACTTATAGTCCATGATGTCACTATTGTTAG
AATTTTTAATTTAATGTATCGTACTGACTCCTGGCAAGAAAAACAGATTT
GGACAAAACACGCAACCACTCATCTAATATGACATCAATATTAAAAGCCA
ATCAAAAGAATATTAAATTAATTAATTTTTATTTTATTTATTTAATTATC
CAATTAAAAGAATCAGTGGGTTAGGAAGTATTGGTTAGGAAGGGTAGTTT
TCAAAGGATTGTAACCAGACCTCGACAGACACGCTAGACGGGGCTAGTAA
AAAAAACAGTTGGCTAGTGTAGGATGGCCTGTATCTATCCAGTTTGACTG
CTATTGCCATACCTTAAATACCACATCAGGAGCGTCAGCAGGATTATATT
TTTTGGGAGGGGGGNATGAAGGTTGGTAAAGTCCCTGTACCTATAAACTA
TAGACAGTGGGTATAGTACCTAAATATCAGAGATTGGAGCAAGTACGTTG
GTATTTTTACTTAAATATCCCTAAGTCCTATAATTTAGTATCTACACTTA
AGTATCCTTCTTAAGTTATATAACTTAGTATTTATACTAAAGTATTCATG
AAACATGAGCAATAATACTTGGCTTAAAAAGTAGTAGTTATTCATACTGG
AAACTTGAATTTTTTTAAGTACTTTCAATAGAAAATGATGAAAAAGAGTT
CACCTCTTTCGTTTCAAAATATTTTAAAAACAATCAATATTTTCATCAAT
TGTTATTAAGGTGATTACACCTTTCTTCTCAATTTTGATCCATAAACTGT
CTTCCTTGCAAGGAATTCCTACGCTAACCTCCACTTATTTACTTCCTATA
AAAGTAGACTTATTCATAAAATGGGATGGAGACAAAACAATCATTATTAT
TCATAGTAAATAAATACACTGCAAGTACTTGTAAATTACTTGAATACCTC
AAAAAATAGGCCTATACTTGCCTTTGTACCTGCAATTTCAATGAAGTACT
TGTACTTGGGCCCATTCCTTCTTGATATTTCGGGTAATAGGATATCGATA
TTGAATGAAAATATCAGAATGGATGAAGTAATCTCGATATTGGGAGTGAA
GTGATGGACTGTCGATATAGTTAATAAATAATCTAGGTAGTAATTTGTTA
AATAGGCTACTACAGGAAGTTCCCTCCAGTGATTTGAGAATTAAAGATTA
AGGTAAGATTTAAAAGAACAGAAAACCTAGACAAGCTCTGGAGTTATTTA
GATACAATAAATCCCATCAGTATTGAATCTACATATGTATATGAAAATTC
TCTGAGCAATCTACTATGTTTTCTAAAGTCAGTATTCCAAGACAAAAAAT
AATAATCTCTTTATTGATTTATTTTAATACAAATGGCATCAATTTATAAC
TTTATTTTCCCTGTCACATTAAATGAATTATAATTTGAGTTTAATCTCCC
AATCAGAACGCATATTAATATCCTTACTAAATTTTTTGATCTATTAATAT
CCCAAATTATAACTTTCCTAGATCATATAGTTCGATATCTACGAAGCGGA
CACGAACTCCTCGGAAGCATTCCAACTAAACGCCCCAGCCAATCACGAGA
CTTATATCGTCTTCTCCGTACACTCCGATCCTCCAGTGATCAAATTGTAG
GAACATCCAAATACAAAAACTCAGAATCAACCGCAAATCCACCTCAAAAG
GGTTTCTTTCTCCGCACTCTCCGAGGAAATAAAGGATTCTTTCTCCGAAC
ACTGCGAGAAGACGACTCCAATAAAGGTTTCTTTCTACGAACCCTACGAA
GTGACCCACAAAAAGGATTCTTCCTTCGAACCCTGAAACGCTCTAATAAT
AATAATGAGATTGCCTCTTTGGAAGATTTAGATGGATTTGAGGGCGATGA
GGACGTCTATGTTGGAGAGGATGAGAAACCCTGGCCACATAACGTGGTTT
TCCAACGAGAGCTCCCAATTTTT
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