EMLSAG00000001387, EMLSAG00000001387-684153 (gene) Lepeophtheirus salmonis

Overview
NameEMLSAG00000001387
Unique NameEMLSAG00000001387-684153
Typegene
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Homology
BLAST of EMLSAG00000001387 vs. L. salmonis peptides
Match: EMLSAP00000001387 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1236:10114:13736:1 gene:EMLSAG00000001387 transcript:EMLSAT00000001387 description:"maker-LSalAtl2s1236-augustus-gene-0.34")

HSP 1 Score: 1023.08 bits (2644), Expect = 0.000e+0
Identity = 501/501 (100.00%), Postives = 501/501 (100.00%), Query Frame = 0
Query:    1 MPLRTDNDVFRRRPLAIPPSSSIGEFERLPLEVTYILLEWIPLDQLGNLALTSERMRVLLSNWTMSPHCLKRASLTSARLCSFSILCKRVTSLLNTRERIKFMMCRFHESLILRSSEVKDIIPRIFSRQINQDHLVDYFIHFGLMLTKFISGWXPREXKSLFQALDQLFLISSRINKYMDYITSSSFQENLSSQDACVQKDLQDTEKQLRLITRSLWWDMSDNSEYSFCGDWLLANILHYIGSSPAKQGIIIYLMFGPTLSHWETPSVIDENNDPTFSKRMLRNDLFSNINWDFMINHTPINFPEGKKVFNRIAQCVCHLSQSCRLWRKTSLIELLDKLFQFPNEWMRDNVSGFLLFCNERVILDYINNKLDRAALLDIQLEIPAKLLVDIMIESYKFDNRITNVKGIGSVVDRVLSYTNHDLRSEFFDCIWDLLLNEIEESRDNIPIEEVIVGFGRFISKRSIYGVSKRKVVFSEEDQPKRKRDDCGTEDETCPNHENEE 501
            MPLRTDNDVFRRRPLAIPPSSSIGEFERLPLEVTYILLEWIPLDQLGNLALTSERMRVLLSNWTMSPHCLKRASLTSARLCSFSILCKRVTSLLNTRERIKFMMCRFHESLILRSSEVKDIIPRIFSRQINQDHLVDYFIHFGLMLTKFISGWXPREXKSLFQALDQLFLISSRINKYMDYITSSSFQENLSSQDACVQKDLQDTEKQLRLITRSLWWDMSDNSEYSFCGDWLLANILHYIGSSPAKQGIIIYLMFGPTLSHWETPSVIDENNDPTFSKRMLRNDLFSNINWDFMINHTPINFPEGKKVFNRIAQCVCHLSQSCRLWRKTSLIELLDKLFQFPNEWMRDNVSGFLLFCNERVILDYINNKLDRAALLDIQLEIPAKLLVDIMIESYKFDNRITNVKGIGSVVDRVLSYTNHDLRSEFFDCIWDLLLNEIEESRDNIPIEEVIVGFGRFISKRSIYGVSKRKVVFSEEDQPKRKRDDCGTEDETCPNHENEE
Sbjct:    1 MPLRTDNDVFRRRPLAIPPSSSIGEFERLPLEVTYILLEWIPLDQLGNLALTSERMRVLLSNWTMSPHCLKRASLTSARLCSFSILCKRVTSLLNTRERIKFMMCRFHESLILRSSEVKDIIPRIFSRQINQDHLVDYFIHFGLMLTKFISGWXPREXKSLFQALDQLFLISSRINKYMDYITSSSFQENLSSQDACVQKDLQDTEKQLRLITRSLWWDMSDNSEYSFCGDWLLANILHYIGSSPAKQGIIIYLMFGPTLSHWETPSVIDENNDPTFSKRMLRNDLFSNINWDFMINHTPINFPEGKKVFNRIAQCVCHLSQSCRLWRKTSLIELLDKLFQFPNEWMRDNVSGFLLFCNERVILDYINNKLDRAALLDIQLEIPAKLLVDIMIESYKFDNRITNVKGIGSVVDRVLSYTNHDLRSEFFDCIWDLLLNEIEESRDNIPIEEVIVGFGRFISKRSIYGVSKRKVVFSEEDQPKRKRDDCGTEDETCPNHENEE 501          
BLAST of EMLSAG00000001387 vs. nr
Match: gi|957842966|ref|XP_014671836.1| (PREDICTED: F-box only protein 47-like [Priapulus caudatus])

HSP 1 Score: 64.3142 bits (155), Expect = 1.764e-7
Identity = 91/440 (20.68%), Postives = 186/440 (42.27%), Query Frame = 0
Query:   23 IGEFERLPLEVTYILLEWIPLDQLGNLALTSERMRVLLSNWTMSPHCLKRASLTSARL-------------CSFSILCKRVTSLLNTRERIKFMMCRFHESLILRSSEVKDIIPRIFSRQINQDHLVDYFIHFGLMLTKFISGWXPREXKSLFQALDQLFLISSRINKYMDYITSSSFQENLSSQDACVQKDLQDTEKQLRLITRSLWWDMSD-NSEYSFCGDWLLANILHYIGSSPAKQGIIIYLMFGPTLSHWETPSVIDENNDPTFSKRMLRNDLFSNINWDFMINHTPINFPEGKKVFNRIAQCVCHLSQSCRLWRKTSLIELLDKLFQFPNEWMRDNVSGFLLFCNERVILDYINNKLDRAALLDIQLEIPAKLLVDIMIESYKFDNRITNVKGIGSVVD---RVLSYTNHDLRSEFFDCIWDLLLNEIEESRDN 445
            +G F+ +P+EV + +   + ++ L  L +TS+ MR L   + M+   + R S+    +              S  +L KR T L +TR+R+K   C   E  + R  +++     + SR      L  Y    G  ++  ++GW   E +  F+++     +SS + K MD    SS+ +               TE  LRL  R ++ D  +  ++ +F   WL   +  +   + AK   ++YL++GP  +                            + WD +  +TP    +  +  + +A+ +  +    + W +  +I ++D+L     EW+ +N++  LLFC   + + ++ +K     + ++   + A   V I    Y     +  ++ + +++D     +++ NH + + F D     +L E+ E RD+
Sbjct:   30 LGYFDLIPVEVIFKIFGVMSVEDLSLLIITSKAMRNLAELYRMTQESINRLSIPRESIDITHSQEYYVKHFRSLGLLMKRSTCLYSTRDRLK--TC---EIFLRRLDQIR---LEVCSRHGKGAGLFCY----GKFISTMLTGWDDHECQRAFRSIQ----VSSDLVKNMDITLKSSYGQ------------FPRTEMNLRLFLRKVFLDQYEKQADRAF---WLSLMLKPWPIVNQAK---LLYLLYGPVCNE--------------------------EVMWDVLSFNTPATLDQSTRYLHALAEAIRTMHTHNKQWSEDDVISIVDELTSTCMEWLAENLANLLLFCGTTITVKFMGSKAINGRMCELG-NLVASFCVVITKFRYSTSWLVNVIQQVLAIIDSPKERVNFLNH-ISTTFKD-----VLAEVAEIRDD 402          
BLAST of EMLSAG00000001387 vs. nr
Match: gi|443711295|gb|ELU05123.1| (hypothetical protein CAPTEDRAFT_214625 [Capitella teleta])

HSP 1 Score: 64.3142 bits (155), Expect = 2.186e-7
Identity = 79/389 (20.31%), Postives = 152/389 (39.07%), Query Frame = 0
Query:   21 SSIGEFERLPLEVTYILLEWIPLDQLGNLALTSERMRVLLSNWTMS--------PHCLKRAS-----LTSARLCS----FSILCKRVTSLLNTRERIKFMMCRFHESLILRSSEVKDIIPRIFSRQINQDHLVDYFIHFGLMLTKFISGWXPREXKSLFQALDQLFLISSRINKYMDYITSSSFQENLSSQDACVQKDLQDTEKQLRLITRSLWWDMSD-NSEYSFCGDWLLANILHYIGSS--PAKQGIIIYLMFGPTLSHWETPSVIDENNDPTFSKRMLRNDLFSNINWDFMINHTPINFPEGKKVFNRIAQCVCHLSQSCRLWRKTSLIELLDKLFQFPNEWMRDNVSGFLLFCNERVILDYINNKLDRAALLDIQLEIPAKLLV 389
             ++G  E +PLE+ +++  ++P++ L  L +TS+ +R L+  +  S        P  +  ++          LC+      +L KR T L +T+ER+K M  +F       + E+     R  S            + FG  L   ++GW   E    F  + Q                SS   +NL +          D E + RL  R ++    +  ++ +F   WL     H I  +     Q  +++L+FGP  S                            I W  M   TP++  E    F+ +A     L    + W + ++I ++D++   P++W+ +N++  L  C +R+    + +K     + ++   +P+  L+
Sbjct:   64 GALGFLELVPLELKFLIFSYLPVEDLSQLTITSKCLRNLVELYRNSGRYQKFLIPQPVVHSAPINKIFEHTELCNHFKKLGLLVKRSTCLYSTKERLKLMH-QFLRKYHCSNQEICCDPTRCVS-----------LLCFGRFLHTVLAGWDDHECIKAFDVITQ----------------SSGMMKNLHNLLNAKPGAYSDLELRTRLFFRRVFIGQHERGADRAF---WL-----HLILKAFPMVHQARVLFLLFGPISS--------------------------DKIQWYEMSERTPVSKEEALLCFSDLANAFRVLHCYSKDWTEDTIISVIDEVTSGPDDWLSENMAHLLFLCGDRITTKVLCSKAINGRVNELCDMVPSLCLI 390          
BLAST of EMLSAG00000001387 vs. nr
Match: gi|942301785|gb|JAN32825.1| (hypothetical protein [Daphnia magna])

HSP 1 Score: 62.003 bits (149), Expect = 7.981e-7
Identity = 64/219 (29.22%), Postives = 97/219 (44.29%), Query Frame = 0
Query:   21 SSIGEFERLPLEVTYILLEWIPLDQLGNLALTSERMRVLLSNWTMSP-------HCLKRASLTSARL--------CSFSILCKRVTSLLNTRERIKFMMCRFHES--LILRSSEVKDIIPRIFSRQIN-QDHLVDYFIHFGLMLTKFISGWXPREXKSLFQALDQLFLISSRINKYMDYITSSSFQENLSSQDACVQKDLQDTEKQLRLITRSLWWDMS 221
            S  G FE LP E+ Y +L+++PL  +G+L  TS+ MR +L  WT +          + R  LTS +             I C+R   LL      K + C F  S  L L    + ++   I  R  + + HL+    + G++L   ISGW  RE   ++  L Q   ISS +  Y+         +N  S +A V       E+ LR+  RSL+ D +
Sbjct:   74 SPCGSFEELPTELIYNILKYLPLTSIGHLGQTSKDMRNILIRWTGTSRMQYRLMQTVLRTRLTSQKTWNGKLSLPSELHIECQRTGVLL------KLLTCLFPTSQRLGLYYQLITEVKRGILERSPDYEPHLIA--ANAGIILHSMISGWDKRECTKVYSLLCQWNNISSTLADYL---------KNPISTNANV-------ERSLRIYLRSLFLDFA 268          
BLAST of EMLSAG00000001387 vs. nr
Match: gi|942412869|gb|JAN88364.1| (hypothetical protein [Daphnia magna])

HSP 1 Score: 62.3882 bits (150), Expect = 8.630e-7
Identity = 63/219 (28.77%), Postives = 97/219 (44.29%), Query Frame = 0
Query:   21 SSIGEFERLPLEVTYILLEWIPLDQLGNLALTSERMRVLLSNWTMSP-------HCLKRASLTSARL--------CSFSILCKRVTSLLNTRERIKFMMCRFHES--LILRSSEVKDIIPRIFSRQIN-QDHLVDYFIHFGLMLTKFISGWXPREXKSLFQALDQLFLISSRINKYMDYITSSSFQENLSSQDACVQKDLQDTEKQLRLITRSLWWDMS 221
            S  G FE LP E+ Y +L+++PL  +G+L  TS+ MR +L  WT +          + R  LTS +             I C+R   LL      K + C F  S  L L    + ++   I  R  + + HL+    + G++L   ISGW  RE   ++  L Q   ISS +  Y+         +N  S +A       + E+ LR+  RSL+ D +
Sbjct:   74 SPCGSFEELPTELIYNILKYLPLTSIGHLGQTSKDMRNILIRWTGTSRMQYRLMQTVLRTRLTSQKTWNGKLSLPSELHIECQRTGVLL------KLLTCLFPTSQRLGLYYQLITEVKRGILERSPDYEPHLIA--ANAGIILHSMISGWDKRECTKVYSLLCQWNNISSTLADYL---------KNPISTNA-------NVERSLRIYLRSLFLDFA 268          
The following BLAST results are available for this feature:
BLAST of EMLSAG00000001387 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000001387 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000001387 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self)
Total hits: 1
Match NameE-valueIdentityDescription
EMLSAP000000013870.000e+0100.00pep:novel supercontig:LSalAtl2s:LSalAtl2s1236:1011... [more]
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BLAST of EMLSAG00000001387 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000001387 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000001387 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017))
Total hits: 4
Match NameE-valueIdentityDescription
gi|957842966|ref|XP_014671836.1|1.764e-720.68PREDICTED: F-box only protein 47-like [Priapulus c... [more]
gi|443711295|gb|ELU05123.1|2.186e-720.31hypothetical protein CAPTEDRAFT_214625 [Capitella ... [more]
gi|942301785|gb|JAN32825.1|7.981e-729.22hypothetical protein [Daphnia magna][more]
gi|942412869|gb|JAN88364.1|8.630e-728.77hypothetical protein [Daphnia magna][more]
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BLAST of EMLSAG00000001387 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1236supercontigLSalAtl2s1236:10114..13736 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Blast vs. GO2014-04-02
TblastN vs C. finmarchicus TSA2014-05-09
Blastp vs. self2014-05-10
Blastp vs. SwissProt2017-02-10
Blastp vs. Selected Arthropods2017-02-20
Blastp vs. NR (2/2017)2017-02-20
Blastp vs. Tigriopus kingsejongensis proteins2018-04-18
Properties
Property NameValue
Logic nameensemblgenomes
Descriptionmaker-LSalAtl2s1236-augustus-gene-0.34
Biotypeprotein_coding
EvidenceIEA
NoteHypothetical protein
Cross References
External references for this gene
DatabaseAccession
Ensembl Metazoa (gene)EMLSAG00000001387 (primary cross-reference)
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
EMLSAT00000001387EMLSAT00000001387-697234Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at LSalAtl2s1236:10114..13736+

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAG00000001387-684153 ID=EMLSAG00000001387-684153|Name=EMLSAG00000001387|organism=Lepeophtheirus salmonis|type=gene|length=3623bp|location=Sequence derived from alignment at LSalAtl2s1236:10114..13736+ (Lepeophtheirus salmonis)
TTCGTCCTTTGAATGTGGACGTTGGCGACATTTTCTTAATTTGATTTATC AATGCCCCTAAGAACTGATAACGACGTATTTCGGCGCCGTCCACTGGCGA TACCCCCTTCCAGCTCAATTGGGGAATTTGAACGCCTTCCTTTAGAGGTA ACTTATATATTGTTGGAATGGATACCCTTGGATCAACTAGGGAATTTAGC ACTCACATCCGAGCGAATGCGGGTCCTCCTTTCCAACTGGACCATGAGCC CGCATTGCCTCAAAAGAGCCTCTCTCACAAGTGCCCGKCTTTGTTCCTTT AGTATTCTGTGCAAACGAGTCACATCACTCCTCAACACGAGGGAGAGGAT CAAATTTATGATGTGCCGCTTCCACGAGAGCCTCATACTTCGATCCTCGG AAGTCAAGGACATCATACCTCGCATCTTTTCCCGACAGATCAATCAGGAT CATTTGGTGGACTACTTCATACATTTTGGACTCATGCTCACCAAATTCAT TAGTGGATGGGYTCCACGGGAGMACAAATCCCTKTTTCAGGCTCTGGACC AATTGTTCTTAATCTCCTCAAGGATAAACAAGTACATGGACTACATCACC TCTTCCTCTTTTCAGGAGAACCTTTCTTCTCAGGACGCCTGCGTTCAAAA GGATCTCCAAGACACGGAGAAACAATTACGTCTCATTACTCGGAGTTTGT GGTGGGACATGTCCGATAACTCGGAATATTCCTTCTGTGGAGTAAGATTT TCACAAATATTCAAATTGGGTCTGGGAAAATTCCCTAAGAAATCATTATA GATTTCACTGCTTCAAACATTATTCATATTAAGTATATTACTATATCTTT TTTATGTTTATATTATAGGATTGGCTATTGGCAAACATCCTTCATTACAT TGGATCCTCTCCAGCCAAACAAGGCATTATCATTTATTTAATGTTTGGGC CCACTTTATCCCACTGGGAGACTCCTTCTGTAATAGATGAAAACAATGAT CCAACTTTTTCAAAGCGAATGCTACGAAACGATCTATTTTCGAATATTAA TTGGGATTTCATGATCAATCATACTCCAATCAACTTCCCAGAAGTATGTA TTGTACATTTTAAAACTCTTTCAACACACCCTCTTAAATTATATCTTATT TTTAGGGGAAAAAGGTTTTTAATAGGATTGCACAATGTGTATGTCATCTC TCACAATCTTGTCGACTATGGAGAAAAACTTCTTTAATCGAACTATTGGA TAAACTTTTTCAATTTCCTAACGAATGGATGAGAGATAACGTATCCGGAT TTCTTCTATTCTGTAATGAAAGAGTAAGGAGGAAAACCAAATCATTAAAA CCTAAATATTAGTCAATAAAAAAAACATTCATTTTCCCCCTAGGTAATTT TAGACTATATTAATAATAAATTGGACAGAGCAGCATTACTAGACATACAG TTAGAAATTCCAGCTAAACTACTAGTAGATATCATGATTGAATCATACAA ATTTGATAATCGAATCACAAATGTAAAAGGAATTGGGAGTGTCGTTGACA GAGTCTTAAGTTATACCAACCATGATTTGAGGAGTGAGTTTTTTGACTGT ATATGGGATCTGTTACTCAATGAAATAGAAGAGTCAAGGGATAATATTCC CATTGAAGAGGTGATAGTAGGATTTGGAAGATTCATATCAAAAAGAAGCA TTTATGGCGTATCTAAGAGAAAAGTTGTCTTTTCTGAAGAAGATCAACCC AAACGTAAACGTGATGATTGTGGAACTGAGGATGAGACTTGCCCTAATCA TGAAAATGAAGAATAATTGCATATTATTGTGGCCTTTGATCGCTCAACCC TAAAAAATTGATCGATGATCAAGAAAATTAATTTTGTATTATGGTTACAA TATGTTCAAATGTTTAATACTTGTTATAAGTTTTAATTAACGAATTAAAT TTATTTATGTAGAAAAACTTTTATACTAAGTTATATTTAATCATATGCTG TTACTTTATCAAATGTAAAGTTTTTTTTAAATATTAATAGTTCATATTCA ATAGTTAAAAATTCAATGAATTCATAATTATAATATAATTAAGAAATGTC CCAGCAATTATTGGCTCTTAATTATTCATTTGTGGTGGTAGTAGTGGGCT CTTCCAACTTCTTTCGTTTATTCTTTGTGTATTTACCTTGATTACGTTTC CGTTTCTCATTTTCTTCATCCGGACAAATTGATGTCGTAGATTTCATCTT TGGTCCCCAGTTTTTTTCTGGGTTGATCTGAAATCTCACTAACTGTGCCT CCCTGGATACCGGATTAGCATTTGGGTGCATTTCAAAACTGATTTTATTT GAAGACTCCTTGGAAAGGATAGCAATTGCAACTGGTTCCTTAGTTTCCTT TGAAGTAGGATATTTATGTTTCCAGGCTCTCATCATGTCCCAAATAAAAT CACTGGGTGCATCTGTTTTGATTGCTAAACGATGACAATGAGATTGAGAT ACTCTAAATCCACCATTAAGGATAGCCGATCGAATTTCATTGATTTTCCC ACTCCCTGCTCGAACCAAGCTGCTCAGTCTATCATGGATATAGTACAATG GTACATCAGGTAATTCCTCTTCTGTAATGGGGAAAAAAGGCTTTAAAGAA AAAAAGTTATGCATATATATTATAAACTCACCAACGACAGATAGGATCCC AAGCATGCGTTTATACGTCCCATATCTATCCTTAGCCATATCATTCTTAA GAGAACTAATTAAATCTGATACAAATGACCGATTATGAATGGGATCCAAC CAAAACGGACCTCCCATGACGTGGCTATGCCCACAGTAATTACATTCCTT TCCAACAGGTGGTCCGTGAGTTAACTTAAGCTTTGAGCCAGGACCAGAAA CATAGGATCCCGAACGTATTGTATGAAAAGATTCACAACCTGTACAAACA AACACGTTCCCTACTTTGGCAATTGAGCTCTTAGCAAGATTCTGTCCCAC TCGAACGCGTACAAAAAGACGAACATAAAAATCAACACTCAAACTTAATA AAGGTTCAATGTACCGTCCATAGCGATTGGCATGAGTTTCAATTGAGTTA AGCACAATTCTGAGGGCCATCTCATGACAACCTTTGGACCTTAGACTAAT TGAACCATATTTTGCCCGACACGAATCCGCAGCATTTCCGCACAGTACGG CCATGTCAGTACATGTAACGCAGAGAAGGCCTCCGTCACTCAAACACTGA ACTGCAGAATCTAAAAAGGGGGTCGGAGAGCCATATGGATCTAAATCGAC GACATCAAATTTGGTTTTCTTATTTGCATACATGACTGCAGTTGCATCCC CTTGGGATGGCGTGATAATGTCATCTACTCCGTTGGAGATTGCATTTTTA GTTATACAAGCTACTGCAGCTTGAGACCAATCGTTGGCCGTTATTTTCTT GATTCCTGCAAGTTCTTTGGCATAGCGGATGGATCGTAGACCTGATGCTG AAAGAGCCTCTAGGATTTGAATTCCATCCGCCTCTCTTTTTATTCCTCTC TTCTCCAAAACATCTTCAATTGGACCCAGTCCCAATTTCTCATTTATATA CGATTGAATCACGTGAATGCTAA
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