EMLSAG00000001467, EMLSAG00000001467-684233 (gene) Lepeophtheirus salmonis

Overview
NameEMLSAG00000001467
Unique NameEMLSAG00000001467-684233
Typegene
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Homology
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BLAST of EMLSAG00000001467 vs. L. salmonis peptides
Match: EMLSAP00000001467 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1249:126920:131150:-1 gene:EMLSAG00000001467 transcript:EMLSAT00000001467 description:"snap-LSalAtl2s1249-processed-gene-0.20")

HSP 1 Score: 160.614 bits (405), Expect = 1.724e-52
Identity = 78/78 (100.00%), Postives = 78/78 (100.00%), Query Frame = 0 
Query:    1 MPIESMRSSLYLMASAFAPIPILVYGSLLSNPTCRSLKKNCKSNCSSQTKRMIPSTEDFGFEDLDMIRRLIITNQNKF 78
            MPIESMRSSLYLMASAFAPIPILVYGSLLSNPTCRSLKKNCKSNCSSQTKRMIPSTEDFGFEDLDMIRRLIITNQNKF
Sbjct:    1 MPIESMRSSLYLMASAFAPIPILVYGSLLSNPTCRSLKKNCKSNCSSQTKRMIPSTEDFGFEDLDMIRRLIITNQNKF 78
The following BLAST results are available for this feature:
BLAST of EMLSAG00000001467 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000001467 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000001467 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self)
Total hits: 1
Match NameE-valueIdentityDescription
EMLSAP000000014671.724e-52100.00pep:novel supercontig:LSalAtl2s:LSalAtl2s1249:1269... [more]
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BLAST of EMLSAG00000001467 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000001467 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000001467 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017))
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000001467 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1249supercontigLSalAtl2s1249:126920..131150 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Blast vs. GO2014-04-02
TblastN vs C. finmarchicus TSA2014-05-09
Blastp vs. self2014-05-10
Blastp vs. SwissProt2017-02-10
Blastp vs. Selected Arthropods2017-02-20
Blastp vs. NR (2/2017)2017-02-20
Blastp vs. Tigriopus kingsejongensis proteins2018-04-18
Properties
Property NameValue
Logic nameensemblgenomes
Descriptionsnap-LSalAtl2s1249-processed-gene-0.20
Biotypeprotein_coding
EvidenceIEA
NoteHypothetical protein
Cross References
External references for this gene
DatabaseAccession
Ensembl Metazoa (gene)EMLSAG00000001467 (primary cross-reference)
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
EMLSAT00000001467EMLSAT00000001467-697314Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at LSalAtl2s1249:126920..131150-

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAG00000001467-684233 ID=EMLSAG00000001467-684233|Name=EMLSAG00000001467|organism=Lepeophtheirus salmonis|type=gene|length=4231bp|location=Sequence derived from alignment at LSalAtl2s1249:126920..131150- (Lepeophtheirus salmonis)
ATGCCTATAGGTTATTTTTATTTCATAATATAATTTTTGTGGGAGTTGTA
CTATTTTGCCAGAAGATTGCACCACTCTCAATCGCTTTATTTATAAATGA
ACATAAGTAAACAATACTTCTGTCCCATAGTATGAAAATGTCACTGAAAT
TAACATTGCGGAAAAGAAGCTCCCCCAAATTTATCATGGCTCAAATGAAT
CTCACTAATATGACACTCTCAAAATAAACTCGCTCAAATGAGCAGACACG
ATTATGTATAAATGATTTATATATTTATTGTTTAGTAAAGTCTTGAATTT
CGTTGTCATATCGGTTGTATAAAATGATGTAACTCATAGTGGTTGSTATA
GATAACAGTAGTGAATTAGCCTATATTTTTATATACCATGCAGAATCCAT
GAGGAGTTCTTTATATCTCATGGCTTCAGCTTTTGCACCCATCCCCATTC
TTGTATATGGTTCCCTCTTAGTAAAAGGAATACCAGAATATTACTAGCCC
AGAAAAATAACAATGACATATTCAATGATCGTAAATATTACTGATTGATC
ATCTTATGTTATGTAGAACCTAACCAATTTTGTGATAGTTGTTGATTCTT
AGAGTGAGTAGACGCCTTGTAGCTAATGATAGCTGCTTCGTTTTGTATTG
TTTATTGTAGTTAGTTATCATTTAATACTTGTAAGAATTGTAGTCTTTTA
AAATATTGTTGAATAAATAATTTATATTTCTTATGAATATTGTTGGACCA
TTAATTTGTATTAACTATTATGCCATTCAAGGGCTTTATTCTAAACAGGA
AATTTTTTTTCAAACATCACTTAGAGTTTTACTTCACTTAAAAAGTACAA
CAAACCAGAAAAATGAAAAAGTATATAAATAAAACTTTCTATTCTATTAA
TACAATTTTTATTATTATACTTTGAAGGCTTCTCTACTTATTATGGTGGT
CCACTCGTTGGGAGATGTCTTTTAACTAAACCGAATATTTAAGGGTACAA
AGTATTGCAGTATTGTAAAATATGCCGTGATCTTTCTTTTTTTTACCTCG
GCCAACCAAGAAATGGGGTTTGTCTCTGTTGTATTGATTGTCTGTTGGCC
ATCAGGATTACGGCAAAAGTTAGAGATCGATTTGGAATTAACTTGGTTGG
AAGATTGTATATGGTCACAGTTTTAGGCCATTACATTTTAAGAGGTCAAA
GATTCACAAAACGGTAAAGTAAATAGTCTACAATAGATTTGAAACATGTT
TTCATTATGCGGAGAATTAATTAAGATGTTTCATATAATTATATTTTATT
TGGGGAAAAGGACCATAGGTGGAGGTTTGCCCCTTACCAAGTGCACATTC
TCTTGCATGTGTTGTTTTCTCTACTTTCTGACGGCATAAACAGTGGTCCT
GGAGACGCCCATCTGCTTAAAGTGTTAATTTTCGATTTATTTTTATCATA
CAGCAAATACTTAAAATTTACAMCCCTACGTATAMCTGCCGATATTTAAT
CCATAATAGCTTTCTTTCATTTTTGAAGAAAATCATGGGAAATGTAATCT
TTATTGCACAAATATTTTTACGGATCAAATACTTTGTTTTTGTCAAATTG
TTCTGGAGTCTGCTAACTAAACAAAACTTTAAAAAAATATAATTTTTCAA
TAGATATTTAACCATTATTAGTTTGAACGACTCTTTTTTTATCAGAGCAT
TAGCTCACCAACACAAAAATATACATTCTATTTCGTTGTCAGCTGCGGAT
TTTTATGCTTCTATTCTCCTAATCAGTGTTCGGAACATTGATATATTTAT
TGTAATATTGTATTAGAATTACCTCCTTTTAAGCTGTGAAGAACTCCCAA
CAATTATGAAATAATAATCATTCCATATTTGGAAAAAATTGTCTAACTAC
CAACTTATTTTTGATCTTTTGTTGTTTCTTTTTAGAAGAAACGTTGCGTG
ATATAATAAAGGTAACGACGAGTTACTTTTACAAAAACAAATAATTGTCA
TAATAAAATACTTTCTTCTAGAATAAAAACTTTATTTTGTCATTGTTTTC
AAACATATTTTATCCTAGAGATTTTTATTGCACAGCTGTAACTTGTAAAC
ATAAAGTACGTAACTAATGTATGTATATAAATATGGTCTCCCTGATTTAM
ATAAATTTATATGTCTGTTAAGCTATAAAAAATAATCTATTATGAATTGA
GGAATAGTTCCACAGTTGATATTAATTTACTAACGAAAAACTTATTTTGG
GCCTTTTCTCCTCTTTTTGCCGTAGATTCGATAGTCGCAGGTAGTGTTGT
GTTGGTGAACCGAGGACTACGGTCCAGTTTAGTCCGGTCCCATCCAAAAA
CAATCTAACGCATCAATTTTTTTTTTTCAAAAAATTAATGCTTTAAATTA
CAGTCCAATCCCACTTGTCGGTCCTTAAAGAAGGTAAAATTGATCCCTTG
TTACGTGAATGAGGTGTTTCCTCCTTTTGATTATTTCGTTATATAATAGA
ATATACTATATAACCAAGTAACAATATAATGTTCGTATTATGATGAAAAA
TATAATAGTTTTTGCAAGATATGTGCAATAATCTTAATAAATATTTGATA
TATCTTATTTAGCTAAATAAGCCATTGATATTTTTATGAAAAGTTCAAAG
GACCGACAGTTAAGCACCGGTCCCAAAGACTGACAGTCCTAAGGACCGGT
CCTAAGACTGGACTGGATCGGATAAATAAGGACTGACACAACACACTCGC
AGGCTTCTAGAGAAGAAAATGTATATTATGTACAATTATTAGGATTGTGG
GAATTGTGCCCGCAAATACAACTTCAACTATCTGGTTCCTCTGTTTTCTT
TCGGACATAAAAAAACCCTTATTCATAAATCATACTTGATGGCAGATGGG
TAATTACGAACATACTAATGAGATATCTCAATTATGATTCTTTGACATTA
CAACTTATCTGAAAATTTACTACATATAGAAGCTTTCCTTCACCAAAATA
TGGCTTYACTTKGTACTATTTAATGAAAATAAAATAGCAAGAAAATGTCT
TAATGTTAGTTATAATTTATTAACAGTTTTAAATATTAATTGTCAGATTA
TAAAACTTTGGTTACGAATATCAATATACAAGGTGGATATAACAAATTGT
AAATAGCATGTATGTGAATTTCTAAGGAATTTCTAAGATATAGAAATGAG
GCAGTAAAATAACAAATTATTCAAAAAATATTGTTAATGTTTACGTCCTG
ACAATTAAATGATAACAAAACATTCATTCCATTTGGTGATCATCGATTCC
CTCAATTTCTTAATACTTAGTTTGGACAATCAAATTCGTTCTTTTTCAAA
GATTCCAACAACCCTAACAATGATGTATAAAACACCGGGGGTTGGGGTTG
TTAATTTCTGAAAAAGAAGAAATTCAGTTTTTGTTCAACATTTCTAGTGA
CCACATATCTTGGTATTTGAGGGAAAAAAAATTAAGATTGGCCTCCTGAT
TATGTATTATATCTTTATAATTGATCATTTTGCTCAAAATATAGGAGTGA
CCCAATTTTAATAGAAATACAAGGTTATATCATAATACGTGTAGGACTGA
TGTTTGACTTCCACCACGCATGCAATATTAACGTGAGGGGTTGTGTGTTT
CCTTAAAAACTGCTTTTCTTGTTCCACAGTCGGTAAGATACATTAAATTG
ATAATTTTAGCAATAGTGACGTCATAAACTATGAGTGGTTATGTGTTTTG
TCAAATTCTGTCTGTCTTGCCCAGCAGTCGGTACAATACATCAGATTGAA
AATTCTAGTAAGTCCGATTACATGATGGTCTAACCCTGTATTTCCTATAT
GCCTTGGGATTGACCCAATAAGTTTTGCTTTCATCGTCATTTCAGGGAGT
CAATTTTCTCTAAATTTATTGAATAGTTACATGTATTATTAGACTCTCTT
TAATATAATCTTTCCGGCGATTAGTAACATCCATGAATGTTAAATACAAT
AAATTTGTACTTAAAATTAGAAAACTTTATTTTGATTTAAAAACAATATA
TCCTGAAGATATCTTGGATATTTCCTAGCCAMCCAGCCATTCTTTTAATT
AACTCAAACAGAACTGTAAAAGTAATTGCTCTTCTCAAACTAAACGAATG
ATTCCATCGACAGAGGACTTTGGATTTGAAGATTTAGATATGATCAGAAG
ATTAATCATAACTAATCAAAATAAGTTCTGA
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