EMLSAG00000001621, EMLSAG00000001621-684387 (gene) Lepeophtheirus salmonis

Overview
NameEMLSAG00000001621
Unique NameEMLSAG00000001621-684387
Typegene
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Homology
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BLAST of EMLSAG00000001621 vs. C. finmarchicus
Match: gi|592785457|gb|GAXK01169111.1| (TSA: Calanus finmarchicus comp1029_c3_seq5 transcribed RNA sequence)

HSP 1 Score: 64.3142 bits (155), Expect = 4.931e-12
Identity = 33/61 (54.10%), Postives = 40/61 (65.57%), Query Frame = 0 
Query:   65 DYFVCDWWFNFDCANAEGLYFRNEEVAAEREASSNNGNTGNDLNGSAS------GTYQQPS 119
            +YF+CDWWFNFDCA AEGLY  N+E+AAEREA  N+G   + +   AS      G Y  PS
Sbjct:  468 NYFICDWWFNFDCAEAEGLYSLNDEIAAEREA--NSGAASDPVGSYASPDAAPIGGYDAPS 644
[Close]
BLAST of EMLSAG00000001621 vs. C. finmarchicus
Match: gi|592785415|gb|GAXK01169153.1| (TSA: Calanus finmarchicus comp1029_c19_seq12 transcribed RNA sequence)

HSP 1 Score: 64.3142 bits (155), Expect = 4.978e-12
Identity = 33/61 (54.10%), Postives = 40/61 (65.57%), Query Frame = 0 
Query:   65 DYFVCDWWFNFDCANAEGLYFRNEEVAAEREASSNNGNTGNDLNGSAS------GTYQQPS 119
            +YF+CDWWFNFDCA AEGLY  N+E+AAEREA  N+G   + +   AS      G Y  PS
Sbjct:  416 NYFICDWWFNFDCAEAEGLYSLNDEIAAEREA--NSGAASDPVGSYASPDAAPIGGYDAPS 592
[Close]
BLAST of EMLSAG00000001621 vs. C. finmarchicus
Match: gi|592785461|gb|GAXK01169107.1| (TSA: Calanus finmarchicus comp1029_c3_seq1 transcribed RNA sequence)

HSP 1 Score: 64.6994 bits (156), Expect = 5.467e-12
Identity = 33/60 (55.00%), Postives = 39/60 (65.00%), Query Frame = 0 
Query:   66 YFVCDWWFNFDCANAEGLYFRNEEVAAEREASSNNGNTGNDLNGSAS------GTYQQPS 119
            YF+CDWWFNFDCA AEGLY  N+E+AAEREA  N+G   + +   AS      G Y  PS
Sbjct:  468 YFICDWWFNFDCAEAEGLYSLNDEIAAEREA--NSGAASDPVGSYASPDAAPIGGYDAPS 641
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BLAST of EMLSAG00000001621 vs. C. finmarchicus
Match: gi|592785426|gb|GAXK01169142.1| (TSA: Calanus finmarchicus comp1029_c19_seq1 transcribed RNA sequence)

HSP 1 Score: 64.6994 bits (156), Expect = 5.732e-12
Identity = 33/60 (55.00%), Postives = 39/60 (65.00%), Query Frame = 0 
Query:   66 YFVCDWWFNFDCANAEGLYFRNEEVAAEREASSNNGNTGNDLNGSAS------GTYQQPS 119
            YF+CDWWFNFDCA AEGLY  N+E+AAEREA  N+G   + +   AS      G Y  PS
Sbjct:  701 YFICDWWFNFDCAEAEGLYSLNDEIAAEREA--NSGAASDPVGSYASPDAAPIGGYDAPS 874
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BLAST of EMLSAG00000001621 vs. C. finmarchicus
Match: gi|592785459|gb|GAXK01169109.1| (TSA: Calanus finmarchicus comp1029_c3_seq3 transcribed RNA sequence)

HSP 1 Score: 64.3142 bits (155), Expect = 5.817e-12
Identity = 33/61 (54.10%), Postives = 40/61 (65.57%), Query Frame = 0 
Query:   65 DYFVCDWWFNFDCANAEGLYFRNEEVAAEREASSNNGNTGNDLNGSAS------GTYQQPS 119
            +YF+CDWWFNFDCA AEGLY  N+E+AAEREA  N+G   + +   AS      G Y  PS
Sbjct:  468 NYFICDWWFNFDCAEAEGLYSLNDEIAAEREA--NSGAASDPVGSYASPDAAPIGGYDAPS 644
[Close]
BLAST of EMLSAG00000001621 vs. C. finmarchicus
Match: gi|592785417|gb|GAXK01169151.1| (TSA: Calanus finmarchicus comp1029_c19_seq10 transcribed RNA sequence)

HSP 1 Score: 64.3142 bits (155), Expect = 5.873e-12
Identity = 33/61 (54.10%), Postives = 40/61 (65.57%), Query Frame = 0 
Query:   65 DYFVCDWWFNFDCANAEGLYFRNEEVAAEREASSNNGNTGNDLNGSAS------GTYQQPS 119
            +YF+CDWWFNFDCA AEGLY  N+E+AAEREA  N+G   + +   AS      G Y  PS
Sbjct:  438 NYFICDWWFNFDCAEAEGLYSLNDEIAAEREA--NSGAASDPVGSYASPDAAPIGGYDAPS 614
[Close]
BLAST of EMLSAG00000001621 vs. C. finmarchicus
Match: gi|592785422|gb|GAXK01169146.1| (TSA: Calanus finmarchicus comp1029_c19_seq5 transcribed RNA sequence)

HSP 1 Score: 64.3142 bits (155), Expect = 6.759e-12
Identity = 26/34 (76.47%), Postives = 31/34 (91.18%), Query Frame = 0 
Query:   65 DYFVCDWWFNFDCANAEGLYFRNEEVAAEREASS 98
            +YF+CDWWFNFDCA AEGLY  N+E+AAEREA+S
Sbjct:  490 NYFICDWWFNFDCAEAEGLYSLNDEIAAEREANS 591
[Close]
BLAST of EMLSAG00000001621 vs. C. finmarchicus
Match: gi|592785460|gb|GAXK01169108.1| (TSA: Calanus finmarchicus comp1029_c3_seq2 transcribed RNA sequence)

HSP 1 Score: 64.3142 bits (155), Expect = 6.759e-12
Identity = 26/34 (76.47%), Postives = 31/34 (91.18%), Query Frame = 0 
Query:   65 DYFVCDWWFNFDCANAEGLYFRNEEVAAEREASS 98
            +YF+CDWWFNFDCA AEGLY  N+E+AAEREA+S
Sbjct:  543 NYFICDWWFNFDCAEAEGLYSLNDEIAAEREANS 644
[Close]
BLAST of EMLSAG00000001621 vs. C. finmarchicus
Match: gi|592785456|gb|GAXK01169112.1| (TSA: Calanus finmarchicus comp1029_c3_seq6 transcribed RNA sequence)

HSP 1 Score: 63.5438 bits (153), Expect = 9.016e-12
Identity = 26/34 (76.47%), Postives = 31/34 (91.18%), Query Frame = 0 
Query:   65 DYFVCDWWFNFDCANAEGLYFRNEEVAAEREASS 98
            +YF+CDWWFNFDCA AEGLY  N+E+AAEREA+S
Sbjct:  543 NYFICDWWFNFDCAEAEGLYSLNDEIAAEREANS 644
[Close]
BLAST of EMLSAG00000001621 vs. C. finmarchicus
Match: gi|592785414|gb|GAXK01169154.1| (TSA: Calanus finmarchicus comp1029_c19_seq13 transcribed RNA sequence)

HSP 1 Score: 63.5438 bits (153), Expect = 9.458e-12
Identity = 26/34 (76.47%), Postives = 31/34 (91.18%), Query Frame = 0 
Query:   65 DYFVCDWWFNFDCANAEGLYFRNEEVAAEREASS 98
            +YF+CDWWFNFDCA AEGLY  N+E+AAEREA+S
Sbjct:  413 NYFICDWWFNFDCAEAEGLYSLNDEIAAEREANS 514
[Close]
BLAST of EMLSAG00000001621 vs. L. salmonis peptides
Match: EMLSAP00000001621 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1285:75198:76459:1 gene:EMLSAG00000001621 transcript:EMLSAT00000001621 description:"augustus_masked-LSalAtl2s1285-processed-gene-0.1")

HSP 1 Score: 275.404 bits (703), Expect = 7.179e-96
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 0 
Query:    1 MSYTHRLLFKSTIIFIIGTVCADLSSYGINDQFAAEXNNLNIIAAATNSLEPLDPIAALGEALPDYFVCDWWFNFDCANAEGLYFRNEEVAAEREASSNNGNTGNDLNGSASGTYQQPSVAPGSSYAPQSSYSSSS 136
            MSYTHRLLFKSTIIFIIGTVCADLSSYGINDQFAAEXNNLNIIAAATNSLEPLDPIAALGEALPDYFVCDWWFNFDCANAEGLYFRNEEVAAEREASSNNGNTGNDLNGSASGTYQQPSVAPGSSYAPQSSYSSSS
Sbjct:    1 MSYTHRLLFKSTIIFIIGTVCADLSSYGINDQFAAEXNNLNIIAAATNSLEPLDPIAALGEALPDYFVCDWWFNFDCANAEGLYFRNEEVAAEREASSNNGNTGNDLNGSASGTYQQPSVAPGSSYAPQSSYSSSS 136
[Close]
BLAST of EMLSAG00000001621 vs. L. salmonis peptides
Match: EMLSAP00000012114 (pep:novel supercontig:LSalAtl2s:LSalAtl2s86:25603:29206:-1 gene:EMLSAG00000012114 transcript:EMLSAT00000012114 description:"maker-LSalAtl2s86-snap-gene-1.6")

HSP 1 Score: 68.1662 bits (165), Expect = 1.400e-14
Identity = 28/47 (59.57%), Postives = 37/47 (78.72%), Query Frame = 0 
Query:   66 YFVCDWWFNFDCANAEGLYFRNEEVAAEREASSNNGNTGNDLNGSAS 112
            YF+CDWWFNFDC+ AEGL+ +N+E+AAEREA+S    +G+   GS S
Sbjct:  140 YFICDWWFNFDCSQAEGLFSKNQEIAAEREAASGLLGSGSAPKGSGS 186
[Close]
BLAST of EMLSAG00000001621 vs. L. salmonis peptides
Match: EMLSAP00000004709 (pep:novel supercontig:LSalAtl2s:LSalAtl2s24876:29:376:-1 gene:EMLSAG00000004709 transcript:EMLSAT00000004709 description:"snap_masked-LSalAtl2s24876-processed-gene-0.1")

HSP 1 Score: 62.7734 bits (151), Expect = 1.568e-13
Identity = 26/31 (83.87%), Postives = 27/31 (87.10%), Query Frame = 0 
Query:   66 YFVCDWWFNFDCANAEGLYFRNEEVAAEREA 96
            YFVCDWWF FDCANAE LY RNEE+A EREA
Sbjct:   15 YFVCDWWFXFDCANAESLYSRNEEIADEREA 45
[Close]
BLAST of EMLSAG00000001621 vs. L. salmonis peptides
Match: EMLSAP00000002548 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1505:1569:2945:-1 gene:EMLSAG00000002548 transcript:EMLSAT00000002548 description:"snap_masked-LSalAtl2s1505-processed-gene-0.9")

HSP 1 Score: 62.7734 bits (151), Expect = 2.363e-13
Identity = 32/68 (47.06%), Postives = 40/68 (58.82%), Query Frame = 0 
Query:   67 FVCDWWFNFDCANAEGLYFRNEEVAAEREASSNNGNTGNDLNGSASGTYQQPS------VAPGSSYAP 128
            F+CDWWFNFDC+ A  LY +NEE+AAER  +S     G   +GSA  +Y  P+       APG   AP
Sbjct:   68 FICDWWFNFDCSQATALYSKNEEIAAERSTASGGAAGGLIGSGSAPNSYGAPAPSGTGYPAPGLGPAP 135
[Close]
BLAST of EMLSAG00000001621 vs. L. salmonis peptides
Match: EMLSAP00000010999 (pep:novel supercontig:LSalAtl2s:LSalAtl2s73:669850:670801:1 gene:EMLSAG00000010999 transcript:EMLSAT00000010999 description:"maker-LSalAtl2s73-augustus-gene-6.4")

HSP 1 Score: 63.1586 bits (152), Expect = 3.139e-13
Identity = 32/64 (50.00%), Postives = 40/64 (62.50%), Query Frame = 0 
Query:   66 YFVCDWWFNFDCANAEGLYFRNEEVAAEREASSNNGNTGNDLNGSASGTYQQPSVAPGSSYAPQ 129
            YF+CDWWFNFDCA AE LY +NEEV AERE++     + N      SG+  +P+ A  S   PQ
Sbjct:  146 YFICDWWFNFDCAQAEDLYSKNEEVQAERESAPVFSPSTN------SGSPSRPTPARPSPSQPQ 203
[Close]
BLAST of EMLSAG00000001621 vs. L. salmonis peptides
Match: EMLSAP00000012561 (pep:novel supercontig:LSalAtl2s:LSalAtl2s92:1468118:1470026:-1 gene:EMLSAG00000012561 transcript:EMLSAT00000012561 description:"maker-LSalAtl2s92-snap-gene-14.8")

HSP 1 Score: 62.7734 bits (151), Expect = 2.154e-12
Identity = 24/33 (72.73%), Postives = 29/33 (87.88%), Query Frame = 0 
Query:   66 YFVCDWWFNFDCANAEGLYFRNEEVAAEREASS 98
            YF+CDWWFNFDC+ AEGLY  N ++AAEREAS+
Sbjct:  172 YFICDWWFNFDCSTAEGLYSINNDIAAEREAST 204
[Close]
BLAST of EMLSAG00000001621 vs. L. salmonis peptides
Match: EMLSAP00000005838 (pep:novel supercontig:LSalAtl2s:LSalAtl2s3161:1:961:1 gene:EMLSAG00000005838 transcript:EMLSAT00000005838 description:"maker-LSalAtl2s3161-augustus-gene-0.2")

HSP 1 Score: 60.8474 bits (146), Expect = 2.545e-12
Identity = 26/53 (49.06%), Postives = 35/53 (66.04%), Query Frame = 0 
Query:   67 FVCDWWFNFDCANAEGLYFRNEEVAAEREASSNNGNTGNDLNGSASGTYQQPS 119
            F+CDWWFNFDC+ A  LY +NEE+AAER  +S     G   +GS+  +Y  P+
Sbjct:   54 FICDWWFNFDCSQATALYSKNEEIAAERSTASGGAAGGLIGSGSSPNSYGAPA 106
[Close]
BLAST of EMLSAG00000001621 vs. L. salmonis peptides
Match: EMLSAP00000003532 (pep:novel supercontig:LSalAtl2s:LSalAtl2s193:303143:304064:1 gene:EMLSAG00000003532 transcript:EMLSAT00000003532 description:"maker-LSalAtl2s193-augustus-gene-3.6")

HSP 1 Score: 61.2326 bits (147), Expect = 2.648e-12
Identity = 40/92 (43.48%), Postives = 46/92 (50.00%), Query Frame = 0 
Query:   65 DYFVCDWWFNFDCANAEGLYFRNEEVAAEREA-------------SSNNGNTGNDLN--------------GSASGTYQQPSVAPGSSYAPQ 129
            +YFVCDWWFNFDCANAE LY RNEE+AA                 +SNNG   +D N              G+ASGT      AP SSY  +
Sbjct:  169 EYFVCDWWFNFDCANAESLYSRNEEIAAANNEGFVDNSNNVGFVDTSNNGGFIDDSNNGGFAGSRTNNGPFGAASGTDLIIEEAPQSSYQSR 260
[Close]
BLAST of EMLSAG00000001621 vs. L. salmonis peptides
Match: EMLSAP00000012168 (pep:novel supercontig:LSalAtl2s:LSalAtl2s877:30141:49566:1 gene:EMLSAG00000012168 transcript:EMLSAT00000012168 description:"maker-LSalAtl2s877-snap-gene-0.9")

HSP 1 Score: 62.3882 bits (150), Expect = 3.173e-12
Identity = 27/53 (50.94%), Postives = 35/53 (66.04%), Query Frame = 0 
Query:   67 FVCDWWFNFDCANAEGLYFRNEEVAAEREASSNNGNTGNDLNGSASGTYQQPS 119
            F+CDWWFNFDC+ A  LY +NEE+AAER  +S     G   +GSA  +Y  P+
Sbjct:  208 FICDWWFNFDCSQAIALYSKNEEIAAERSTASGGAAGGLIGSGSAPNSYGAPA 260

HSP 2 Score: 56.9954 bits (136), Expect = 2.228e-10
Identity = 23/46 (50.00%), Postives = 30/46 (65.22%), Query Frame = 0 
Query:   67 FVCDWWFNFDCANAEGLYFRNEEVAAEREASSNNGNTGNDLNGSAS 112
            F+CDWWFNFDC+ A  LY +NEE+AAER  +     +G+   G  S
Sbjct:  423 FICDWWFNFDCSZATALYSKNEEIAAERSTAGGLIGSGSAPKGYGS 468
[Close]
BLAST of EMLSAG00000001621 vs. L. salmonis peptides
Match: EMLSAP00000009558 (pep:novel supercontig:LSalAtl2s:LSalAtl2s615:574495:575328:-1 gene:EMLSAG00000009558 transcript:EMLSAT00000009558 description:"maker-LSalAtl2s615-snap-gene-5.60")

HSP 1 Score: 56.225 bits (134), Expect = 7.582e-11
Identity = 27/44 (61.36%), Postives = 31/44 (70.45%), Query Frame = 0 
Query:   65 DYFVCDWWFNFDCANAEGLYFRNEEVAAEREASSNNGNTGNDLN 108
            +YF+CDWWFNFDC+ A  LY  N+ VAAEREA  NN  T N  N
Sbjct:  163 NYFICDWWFNFDCSVAPSLYSLNDAVAAEREA--NNPPTVNRRN 204
[Close]
BLAST of EMLSAG00000001621 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold1154_size58699-snap-gene-0.14 (protein:Tk03169 transcript:maker-scaffold1154_size58699-snap-gene-0.14-mRNA-1 annotation:"hypothetical protein DAPPUDRAFT_62084")

HSP 1 Score: 59.6918 bits (143), Expect = 1.140e-11
Identity = 22/32 (68.75%), Postives = 27/32 (84.38%), Query Frame = 0 
Query:   65 DYFVCDWWFNFDCANAEGLYFRNEEVAAEREA 96
            +YF+CDWWFNFDCA AE LY RN+E+ AE+ A
Sbjct:  172 NYFICDWWFNFDCAEAESLYSRNDEIRAEQVA 203
[Close]
BLAST of EMLSAG00000001621 vs. Tigriopus kingsejongenis genes
Match: snap_masked-scaffold374_size191929-processed-gene-0.12 (protein:Tk01258 transcript:snap_masked-scaffold374_size191929-processed-gene-0.12-mRNA-1 annotation:"conserved hypothetical protein")

HSP 1 Score: 57.7658 bits (138), Expect = 4.249e-11
Identity = 22/32 (68.75%), Postives = 27/32 (84.38%), Query Frame = 0 
Query:   65 DYFVCDWWFNFDCANAEGLYFRNEEVAAEREA 96
            +YF+CDWWFNFDCA AE LY RN+E+ AE+ A
Sbjct:  173 NYFICDWWFNFDCAEAESLYSRNDEIRAEQVA 204
[Close]
BLAST of EMLSAG00000001621 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold1274_size51331-snap-gene-0.15 (protein:Tk06420 transcript:maker-scaffold1274_size51331-snap-gene-0.15-mRNA-1 annotation:"PREDICTED: uncharacterized protein LOC100901383")

HSP 1 Score: 56.9954 bits (136), Expect = 4.767e-11
Identity = 22/32 (68.75%), Postives = 27/32 (84.38%), Query Frame = 0 
Query:   65 DYFVCDWWFNFDCANAEGLYFRNEEVAAEREA 96
            +YF+CDWWFNFDCA AE LY RN+E+ AE+ A
Sbjct:   75 NYFICDWWFNFDCAEAESLYSRNDEIRAEQVA 106
[Close]
BLAST of EMLSAG00000001621 vs. Tigriopus kingsejongenis genes
Match: snap_masked-scaffold58_size443543-processed-gene-1.14 (protein:Tk00693 transcript:snap_masked-scaffold58_size443543-processed-gene-1.14-mRNA-1 annotation:"PREDICTED: uncharacterized protein LOC100901383")

HSP 1 Score: 53.9138 bits (128), Expect = 1.136e-9
Identity = 37/63 (58.73%), Postives = 44/63 (69.84%), Query Frame = 0 
Query:   65 DYFVCDWWFNFDCANAEGLYFRNEEVAAEREASSNNGNTGNDLNGSASGTYQQPSVAPGSSYA 127
            +YF+CDWWFNFDC+ AEGLY  NEE+AAEREA+S N N  N        TYQ  + AP +SYA
Sbjct:  168 EYFICDWWFNFDCSEAEGLYSINEEIAAEREAASQN-NQNNQA------TYQSAASAPQASYA 223
[Close]
BLAST of EMLSAG00000001621 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold1154_size58699-snap-gene-0.15 (protein:Tk03166 transcript:maker-scaffold1154_size58699-snap-gene-0.15-mRNA-1 annotation:"PREDICTED: uncharacterized protein LOC100904950")

HSP 1 Score: 51.9878 bits (123), Expect = 3.925e-9
Identity = 17/31 (54.84%), Postives = 25/31 (80.65%), Query Frame = 0 
Query:   65 DYFVCDWWFNFDCANAEGLYFRNEEVAAERE 95
            +Y +CDWWFNFDC+ A+ LY  N+++ AER+
Sbjct:  148 EYLICDWWFNFDCSQAQSLYSVNDQIEAERQ 178
[Close]
BLAST of EMLSAG00000001621 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold374_size191929-snap-gene-0.35 (protein:Tk01256 transcript:maker-scaffold374_size191929-snap-gene-0.35-mRNA-1 annotation:"homeobox protein 2-like")

HSP 1 Score: 49.6766 bits (117), Expect = 3.594e-8
Identity = 30/68 (44.12%), Postives = 39/68 (57.35%), Query Frame = 0 
Query:   65 DYFVCDWWFNFDCANAEGLYFRN-EEVAAEREASSNNGNTGNDLNGSASGTYQQPSVAPGSSYAPQSS 131
            +YF+CDWWFNFDCA AE     N   VA E  A+++ G+ G   +     T    +VAP +SYA  SS
Sbjct:  172 NYFICDWWFNFDCAEAEAEQVANIGAVAPEGGAAASTGDLGAYDDYDLGATDLSATVAPLASYAADSS 239
The following BLAST results are available for this feature:
BLAST of EMLSAG00000001621 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000001621 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA)
Total hits: 25
Match NameE-valueIdentityDescription
gi|592785457|gb|GAXK01169111.1|4.931e-1254.10TSA: Calanus finmarchicus comp1029_c3_seq5 transcr... [more]
gi|592785415|gb|GAXK01169153.1|4.978e-1254.10TSA: Calanus finmarchicus comp1029_c19_seq12 trans... [more]
gi|592785461|gb|GAXK01169107.1|5.467e-1255.00TSA: Calanus finmarchicus comp1029_c3_seq1 transcr... [more]
gi|592785426|gb|GAXK01169142.1|5.732e-1255.00TSA: Calanus finmarchicus comp1029_c19_seq1 transc... [more]
gi|592785459|gb|GAXK01169109.1|5.817e-1254.10TSA: Calanus finmarchicus comp1029_c3_seq3 transcr... [more]
gi|592785417|gb|GAXK01169151.1|5.873e-1254.10TSA: Calanus finmarchicus comp1029_c19_seq10 trans... [more]
gi|592785422|gb|GAXK01169146.1|6.759e-1276.47TSA: Calanus finmarchicus comp1029_c19_seq5 transc... [more]
gi|592785460|gb|GAXK01169108.1|6.759e-1276.47TSA: Calanus finmarchicus comp1029_c3_seq2 transcr... [more]
gi|592785456|gb|GAXK01169112.1|9.016e-1276.47TSA: Calanus finmarchicus comp1029_c3_seq6 transcr... [more]
gi|592785414|gb|GAXK01169154.1|9.458e-1276.47TSA: Calanus finmarchicus comp1029_c19_seq13 trans... [more]

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BLAST of EMLSAG00000001621 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self)
Total hits: 18
Match NameE-valueIdentityDescription
EMLSAP000000016217.179e-96100.00pep:novel supercontig:LSalAtl2s:LSalAtl2s1285:7519... [more]
EMLSAP000000121141.400e-1459.57pep:novel supercontig:LSalAtl2s:LSalAtl2s86:25603:... [more]
EMLSAP000000047091.568e-1383.87pep:novel supercontig:LSalAtl2s:LSalAtl2s24876:29:... [more]
EMLSAP000000025482.363e-1347.06pep:novel supercontig:LSalAtl2s:LSalAtl2s1505:1569... [more]
EMLSAP000000109993.139e-1350.00pep:novel supercontig:LSalAtl2s:LSalAtl2s73:669850... [more]
EMLSAP000000125612.154e-1272.73pep:novel supercontig:LSalAtl2s:LSalAtl2s92:146811... [more]
EMLSAP000000058382.545e-1249.06pep:novel supercontig:LSalAtl2s:LSalAtl2s3161:1:96... [more]
EMLSAP000000035322.648e-1243.48pep:novel supercontig:LSalAtl2s:LSalAtl2s193:30314... [more]
EMLSAP000000121683.173e-1250.94pep:novel supercontig:LSalAtl2s:LSalAtl2s877:30141... [more]
EMLSAP000000095587.582e-1161.36pep:novel supercontig:LSalAtl2s:LSalAtl2s615:57449... [more]

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BLAST of EMLSAG00000001621 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000001621 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000001621 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017))
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000001621 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins)
Total hits: 6
Match NameE-valueIdentityDescription
maker-scaffold1154_size58699-snap-gene-0.141.140e-1168.75protein:Tk03169 transcript:maker-scaffold1154_size... [more]
snap_masked-scaffold374_size191929-processed-gene-0.124.249e-1168.75protein:Tk01258 transcript:snap_masked-scaffold374... [more]
maker-scaffold1274_size51331-snap-gene-0.154.767e-1168.75protein:Tk06420 transcript:maker-scaffold1274_size... [more]
snap_masked-scaffold58_size443543-processed-gene-1.141.136e-958.73protein:Tk00693 transcript:snap_masked-scaffold58_... [more]
maker-scaffold1154_size58699-snap-gene-0.153.925e-954.84protein:Tk03166 transcript:maker-scaffold1154_size... [more]
maker-scaffold374_size191929-snap-gene-0.353.594e-844.12protein:Tk01256 transcript:maker-scaffold374_size1... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1285supercontigLSalAtl2s1285:75198..76459 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Blast vs. GO2014-04-02
TblastN vs C. finmarchicus TSA2014-05-09
Blastp vs. self2014-05-10
Blastp vs. SwissProt2017-02-10
Blastp vs. Selected Arthropods2017-02-20
Blastp vs. NR (2/2017)2017-02-20
Blastp vs. Tigriopus kingsejongensis proteins2018-04-18
Properties
Property NameValue
Logic nameensemblgenomes
Descriptionaugustus_masked-LSalAtl2s1285-processed-gene-0.1
Biotypeprotein_coding
EvidenceIEA
NoteHypothetical protein
Cross References
External references for this gene
DatabaseAccession
Ensembl Metazoa (gene)EMLSAG00000001621 (primary cross-reference)
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
EMLSAT00000001621EMLSAT00000001621-697468Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at LSalAtl2s1285:75198..76459+

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAG00000001621-684387 ID=EMLSAG00000001621-684387|Name=EMLSAG00000001621|organism=Lepeophtheirus salmonis|type=gene|length=1262bp|location=Sequence derived from alignment at LSalAtl2s1285:75198..76459+ (Lepeophtheirus salmonis)
ATGAGTTACACACACCGCCTCCTCTTCAAGTCAACTATTATTTTCATCAT
TGGTACTGTTTGTGCGGATCTATCTTCCTATGGAATCAATGATCAATTTG
CTGCAGAGTKAAATAATTTAAACATCATTGCTGCTGCCACAAATTCACTT
GAACCTCTTGATCCCATTGCAGCTCTAGGAGAAGCTCTTCCTGGTATTCC
TGGAGAGGATTATCCTATTTTGTTTGAAGTCCCTGAGACTGCATTCGGCT
GTGAAGGAAGAGTCGAAGGAGGTAATCAAATGGAGTGAAATAATCCAGAG
GCACCCAAATTAAGTAACTTTATTTTTTGTAAAAAAATTAATATTTGATT
TTTTTCCAAAAAATGTAGTTTTTTGTAAATAGCTATGGATTTTTAATTTT
TTTCCAAAAAAATAAATATTAGAAATTTCATTTTTGAATTCTTTTTCAAA
AAATTAATTTTGTATGAAAAACACTAGATTTTTGATAAAAAAATTGAAAT
AATTAAATATTAATTTTTTTATTTAATTTAAAATTATATGAATAGCAATA
GAATTTTGAAATTTAAAAAAAAAGTTAACATTTGAAATGAATAGCAAAAG
ATTTTATATTTAATTTTTTTTTTTTTGTGAATAGTTAAAGATTTTATTTT
ACTTTTAATCTTCCTTTAATTGGTTCGATGGAGTTGCACTAATTAAGTAT
AAGTAAACATTATAGTATTTATTACATTTACTCCATCTAACTAGGAATAT
TTTGGTAAAATCCATATAGATAAAGTATATTTCTTTCTCTAAGAATCACA
TGGGCGCGAATCTACAAAAATGCAAAAACCGAGCCCCCCCCCCCCCCCCA
ACAAAAACAATATAATCTTGCAGATGCCCTGTAATTGTGTTTAAGCTTAA
TTTTGTGTATTTTATCATATATTTTAGGCCTCTATGCAGATTCTGAGACG
GAATGTCAGGCATTTCACATTTGTGTTGCTAGTGCCGAGAGTGCTCTTGA
TAAGTACTCCTTCCTTTGCCCTAATGGAACTATTTTCAATCAAGACTATT
TTGTTTGTGATTGGTGGTTCAACTTTGACTGTGCTAATGCTGAAGGACTT
TACTTTAGAAATGAAGAAGTTGCTGCTGAGAGAGAAGCCTCATCAAACAA
TGGTAATACTGGTAATGACCTTAATGGATCTGCTTCAGGAACATACCAGC
AACCATCAGTTGCTCCTGGTTCCTCCTATGCTCCTCAATCCAGTTACTCC
TCTAGCTCGTAA
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