EMLSAG00000001689, EMLSAG00000001689-684455 (gene) Lepeophtheirus salmonis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of EMLSAG00000001689 vs. C. finmarchicus
Match: gi|592833294|gb|GAXK01124250.1| (TSA: Calanus finmarchicus comp257172_c0_seq1 transcribed RNA sequence) HSP 1 Score: 70.4774 bits (171), Expect = 3.581e-12 Identity = 57/204 (27.94%), Postives = 93/204 (45.59%), Query Frame = 0 Query: 3 LIIMDIIGELYARNQSYFVKMILIYAGHNSVCSCLLTCRSWYNMIRHGIGDWEGLVKRIMYENNLFLSLESAIFRERKLSPQIKFFNMTD----------LRTGIIQNKKNPRSWTLSAGGAITYFLLHLNILYTGMKDGRIKMWSMKPS--EKALGCLKSRKNFPVLALTARKNILINSNYDISLCVWDLRTKALLRVLNSQA 194 ++ MDIIG LY + V+ I+ +V SC C W + +G W +++R+ EN F L + R++ P +T+ I +K+N S L GG + LH L+ GM DG IKMW + +K L + + V +L A ++L++ + D S+ VW++ + +LLRVL Sbjct: 479 VVSMDIIGGLYRQGLDVLVEKIVAQTDGKTVTSCFQVCTFWEKHLWNG-NVWRRIIERLFAENADF-RLLCRLNGWRQILPSQGGSEVTEEEYKQIVYKFTEYEGIWSKRNLSSSKLFTGGLFSCLKLHQQWLFAGMLDGLIKMWDVSRDFVKKPLKIFEGHEE-KVSSLDAAGDVLVSGSLDQSVRVWNIESSSLLRVLRGSG 1081
BLAST of EMLSAG00000001689 vs. C. finmarchicus
Match: gi|592762564|gb|GAXK01191849.1| (TSA: Calanus finmarchicus comp41533_c1_seq1 transcribed RNA sequence) HSP 1 Score: 41.2022 bits (95), Expect = 5.273e-3 Identity = 26/89 (29.21%), Postives = 38/89 (42.70%), Query Frame = 0 Query: 124 ILYTGMKDGRIKMWSMKPSEKALGCLKSRKNFPVLALTARKNILINSNYDISLCVWDLRTKALLRVLNSQALLYSLKLSSTHLLALSWA 212 ++ G G + MW+ E A L R+ +A+ N + S D S+ +WDLRT L A L+ S LL LS+ Sbjct: 751 VVMLGHSKGTVTMWTPSMKEPAAKMLVHRQPVRAVAVDRSGNYMATSATDRSVKIWDLRTYKSLHEYKVGAGASHLQFSQKGLLGLSFG 1017
BLAST of EMLSAG00000001689 vs. C. finmarchicus
Match: gi|592762568|gb|GAXK01191845.1| (TSA: Calanus finmarchicus comp41533_c0_seq1 transcribed RNA sequence) HSP 1 Score: 41.2022 bits (95), Expect = 5.525e-3 Identity = 26/89 (29.21%), Postives = 38/89 (42.70%), Query Frame = 0 Query: 124 ILYTGMKDGRIKMWSMKPSEKALGCLKSRKNFPVLALTARKNILINSNYDISLCVWDLRTKALLRVLNSQALLYSLKLSSTHLLALSWA 212 ++ G G + MW+ E A L R+ +A+ N + S D S+ +WDLRT L A L+ S LL LS+ Sbjct: 205 VVMLGHSKGTVTMWTPSMKEPAAKMLVHRQPVRAVAVDRSGNYMATSATDRSVKIWDLRTYKSLHEYKVGAGASHLQFSQKGLLGLSFG 471
BLAST of EMLSAG00000001689 vs. C. finmarchicus
Match: gi|592860916|gb|GAXK01096646.1| (TSA: Calanus finmarchicus comp54957_c0_seq3 transcribed RNA sequence) HSP 1 Score: 35.8094 bits (81), Expect = 1.635e-1 Identity = 19/79 (24.05%), Postives = 33/79 (41.77%), Query Frame = 0 Query: 122 LNILYTGMKDGRIKMWSMKPSEKALGCLKSRKNFPVLALTARKNILINSNYDISLCVWDLRTKALLRVLNSQALLYSLK 200 LN++ TG DG +K+W + G +++ K L+ + VWDLR A ++ +L Y + Sbjct: 366 LNVIVTGSWDGTVKVWDQRAGNPCTGVYSQPDKVYTMSVAGEK--LVVGTAGRKVWVWDLRNMACVQQKRESSLKYQTR 596
BLAST of EMLSAG00000001689 vs. C. finmarchicus
Match: gi|592860917|gb|GAXK01096645.1| (TSA: Calanus finmarchicus comp54957_c0_seq2 transcribed RNA sequence) HSP 1 Score: 35.8094 bits (81), Expect = 1.635e-1 Identity = 19/79 (24.05%), Postives = 33/79 (41.77%), Query Frame = 0 Query: 122 LNILYTGMKDGRIKMWSMKPSEKALGCLKSRKNFPVLALTARKNILINSNYDISLCVWDLRTKALLRVLNSQALLYSLK 200 LN++ TG DG +K+W + G +++ K L+ + VWDLR A ++ +L Y + Sbjct: 366 LNVIVTGSWDGTVKVWDQRAGNPCTGVYSQPDKVYTMSVAGEK--LVVGTAGRKVWVWDLRNMACVQQKRESSLKYQTR 596
BLAST of EMLSAG00000001689 vs. C. finmarchicus
Match: gi|592860914|gb|GAXK01096648.1| (TSA: Calanus finmarchicus comp54957_c0_seq5 transcribed RNA sequence) HSP 1 Score: 35.4242 bits (80), Expect = 1.973e-1 Identity = 19/79 (24.05%), Postives = 33/79 (41.77%), Query Frame = 0 Query: 122 LNILYTGMKDGRIKMWSMKPSEKALGCLKSRKNFPVLALTARKNILINSNYDISLCVWDLRTKALLRVLNSQALLYSLK 200 LN++ TG DG +K+W + G +++ K L+ + VWDLR A ++ +L Y + Sbjct: 344 LNVIVTGSWDGTVKVWDQRAGNPCTGVYSQPDKVYTMSVAGEK--LVVGTAGRKVWVWDLRNMACVQQKRESSLKYQTR 574
BLAST of EMLSAG00000001689 vs. C. finmarchicus
Match: gi|592860915|gb|GAXK01096647.1| (TSA: Calanus finmarchicus comp54957_c0_seq4 transcribed RNA sequence) HSP 1 Score: 35.4242 bits (80), Expect = 1.973e-1 Identity = 19/79 (24.05%), Postives = 33/79 (41.77%), Query Frame = 0 Query: 122 LNILYTGMKDGRIKMWSMKPSEKALGCLKSRKNFPVLALTARKNILINSNYDISLCVWDLRTKALLRVLNSQALLYSLK 200 LN++ TG DG +K+W + G +++ K L+ + VWDLR A ++ +L Y + Sbjct: 344 LNVIVTGSWDGTVKVWDQRAGNPCTGVYSQPDKVYTMSVAGEK--LVVGTAGRKVWVWDLRNMACVQQKRESSLKYQTR 574
BLAST of EMLSAG00000001689 vs. C. finmarchicus
Match: gi|592951258|gb|GAXK01007295.1| (TSA: Calanus finmarchicus comp5826994_c0_seq1 transcribed RNA sequence) HSP 1 Score: 33.113 bits (74), Expect = 3.532e-1 Identity = 26/95 (27.37%), Postives = 47/95 (49.47%), Query Frame = 0 Query: 127 TGMKDGRIKMWSMKPSEKALGCLKSRKNFPVLALTARKNILINSNYDISLCVWDLRTKALLRVLNSQAL-------LYSLKLSSTHLLALSWAPE 214 +G KDG K+W + E +L L + LA + + L + + ++ +WDL +K L+ +L+ + L S K S+ L+LSW+ + Sbjct: 18 SGGKDGVAKLWDLNRGE-SLYELACNEVINQLAFSPNRYWLCAAT-EQAIRIWDLESKTLVALLDKHTVPDFFPSALNSAKPSNPACLSLSWSAD 296
BLAST of EMLSAG00000001689 vs. C. finmarchicus
Match: gi|592892158|gb|GAXK01066217.1| (TSA: Calanus finmarchicus comp4946_c1_seq2 transcribed RNA sequence) HSP 1 Score: 33.113 bits (74), Expect = 1.807e+0 Identity = 21/70 (30.00%), Postives = 38/70 (54.29%), Query Frame = 0 Query: 123 NILYTGMKDGRIKMWSMKPSEKALGCLKSRKNF--PVLALTARKNILINSNYDISLCVWDLRTKALLRVL 190 +++ +G D +K+W +K C+K+ + PVLA+ A+ N LI+ + D ++ +W L T VL Sbjct: 1151 DMVISGSYDTTLKVWELKTGI----CIKTLRGHSAPVLAIQAQGNRLISGSGDKTIRIWHLDTGYCATVL 1348 HSP 2 Score: 31.5722 bits (70), Expect = 5.906e+0 Identity = 25/107 (23.36%), Postives = 51/107 (47.66%), Query Frame = 0 Query: 98 IQNKKNPRSWTLS--AGGAITYFLLHL--NILYTGMKDGRIKMW--SMKPSEKALGC----LKSRKNFPVLALTARKNILINSNYDISLCVWDLRTKALLRVLNSQA 194 + N K W++ AG + +HL N L +G D IK+W S+ + ++ C + + + ++++I+ +YD +L VW+L+T ++ L + Sbjct: 920 VWNVKTNSPWSVMTLAGHSGEVRCMHLEGNRLVSGSTDLTIKVWDLSISVNWSSIACRVTMVGHTDTVRCVQMDQDRDMVISGSYDTTLKVWELKTGICIKTLRGHS 1240
BLAST of EMLSAG00000001689 vs. C. finmarchicus
Match: gi|592927187|gb|GAXK01031279.1| (TSA: Calanus finmarchicus comp21785_c2_seq1 transcribed RNA sequence) HSP 1 Score: 31.9574 bits (71), Expect = 4.522e+0 Identity = 43/176 (24.43%), Postives = 73/176 (41.48%), Query Frame = 0 Query: 158 LALTARKNILINSNYDISLCVWDLRTKALLRVLNSQA-LLYSLKLSSTHLLALSWAPESQIKCICFGINSHYDLEIKDYSPEVPHNQPFS---FLDDKYFI----HEDNVISRYELSEFNYFERDVVIHGLTHRVSSLDVIGD-LLVYVLDNGRIHFHDLNTSQEIYAFLVPELIG 324 L+L ++L+ D S VWD+RTK + L+ + S+ ST ++ + +S I+ +DL S + +++ L K F+ DN I +++ E + + + G V+ L + D +LV DNG +HF D T F P G Sbjct: 244 LSLHPTLDVLVTCGRDSSARVWDMRTKVNIHTLSGHTNTVSSVLTQSTDPQIITASNDSTIRL--------WDLAAGKSSATLTNHKKSVRGLVLHPKLFMFASGGPDN-IKQWKCPEGKFIQN---LSGHNAIVNCLAMNSDGVLVSGADNGTMHFWDWKTGYNFQRFQAPVQPG 735
BLAST of EMLSAG00000001689 vs. L. salmonis peptides
Match: EMLSAP00000001689 (pep:novel supercontig:LSalAtl2s:LSalAtl2s128:964109:966295:1 gene:EMLSAG00000001689 transcript:EMLSAT00000001689 description:"maker-LSalAtl2s128-augustus-gene-10.12") HSP 1 Score: 835.484 bits (2157), Expect = 0.000e+0 Identity = 404/404 (100.00%), Postives = 404/404 (100.00%), Query Frame = 0 Query: 1 MALIIMDIIGELYARNQSYFVKMILIYAGHNSVCSCLLTCRSWYNMIRHGIGDWEGLVKRIMYENNLFLSLESAIFRERKLSPQIKFFNMTDLRTGIIQNKKNPRSWTLSAGGAITYFLLHLNILYTGMKDGRIKMWSMKPSEKALGCLKSRKNFPVLALTARKNILINSNYDISLCVWDLRTKALLRVLNSQALLYSLKLSSTHLLALSWAPESQIKCICFGINSHYDLEIKDYSPEVPHNQPFSFLDDKYFIHEDNVISRYELSEFNYFERDVVIHGLTHRVSSLDVIGDLLVYVLDNGRIHFHDLNTSQEIYAFLVPELIGHHSVSLRISMDYTIIISVLGYEDFIFFCHMRDLENNSYTFRVEKHAFLAFNRLKVVYRETNSLTSLMVIELMPDYSVEDQ 404 MALIIMDIIGELYARNQSYFVKMILIYAGHNSVCSCLLTCRSWYNMIRHGIGDWEGLVKRIMYENNLFLSLESAIFRERKLSPQIKFFNMTDLRTGIIQNKKNPRSWTLSAGGAITYFLLHLNILYTGMKDGRIKMWSMKPSEKALGCLKSRKNFPVLALTARKNILINSNYDISLCVWDLRTKALLRVLNSQALLYSLKLSSTHLLALSWAPESQIKCICFGINSHYDLEIKDYSPEVPHNQPFSFLDDKYFIHEDNVISRYELSEFNYFERDVVIHGLTHRVSSLDVIGDLLVYVLDNGRIHFHDLNTSQEIYAFLVPELIGHHSVSLRISMDYTIIISVLGYEDFIFFCHMRDLENNSYTFRVEKHAFLAFNRLKVVYRETNSLTSLMVIELMPDYSVEDQ Sbjct: 1 MALIIMDIIGELYARNQSYFVKMILIYAGHNSVCSCLLTCRSWYNMIRHGIGDWEGLVKRIMYENNLFLSLESAIFRERKLSPQIKFFNMTDLRTGIIQNKKNPRSWTLSAGGAITYFLLHLNILYTGMKDGRIKMWSMKPSEKALGCLKSRKNFPVLALTARKNILINSNYDISLCVWDLRTKALLRVLNSQALLYSLKLSSTHLLALSWAPESQIKCICFGINSHYDLEIKDYSPEVPHNQPFSFLDDKYFIHEDNVISRYELSEFNYFERDVVIHGLTHRVSSLDVIGDLLVYVLDNGRIHFHDLNTSQEIYAFLVPELIGHHSVSLRISMDYTIIISVLGYEDFIFFCHMRDLENNSYTFRVEKHAFLAFNRLKVVYRETNSLTSLMVIELMPDYSVEDQ 404
BLAST of EMLSAG00000001689 vs. Tigriopus kingsejongenis genes
Match: snap_masked-scaffold127_size327531-processed-gene-1.3 (protein:Tk07872 transcript:snap_masked-scaffold127_size327531-processed-gene-1.3-mRNA-1 annotation:"f-box wd repeat-containing protein 11 isoform 2") HSP 1 Score: 60.8474 bits (146), Expect = 2.807e-10 Identity = 59/215 (27.44%), Postives = 98/215 (45.58%), Query Frame = 0 Query: 1 MALIIMDIIGELYARNQSYFVKMILIYAGHNSVCSCLLTCRSWYNMIRHGIGDWEGLVKRIMYENNLFLSLES-----AIFRERKLSPQIK---FFNMTDLRTGIIQNKKNPRSWTLSAGGAITYFLLHLNILYTGMKDGRIKMWSMKPSEKALGCLKSR----KNFPVLALTARKNILINSN--YDISLCVWDLRTKALLRVLNSQALLYSLKL 201 + + +D I +L N ++ I+ +AG+++ + L + W N I IG W L+ R M + F L S I +E + + FF TDLR ++++ K + + I LLH +L GM +GRIK+W + A+ + V AL+AR L++++ D S+ +WDL T A L + Q L K+ Sbjct: 1 LTMDTVDFIIQLSELNSYIVIENIIQHAGYDATINMLCVSKRW-NAILLDIGLWRRLLDRRMIHDPSFRRLCSLNGWLDIVQEDNVQTKTLAYIFFASTDLRE-VLKSTKPEKVQQIKTYDFINTLLLHQKLLICGMINGRIKVWVLSDDTHAVESTSPKVLEGHTKSVFALSARDKFLVSASGGQDKSIRIWDLDTFAPLHSVVYQNALNCQKM 213 The following BLAST results are available for this feature:
BLAST of EMLSAG00000001689 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO) Total hits: 0
BLAST of EMLSAG00000001689 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA) Total hits: 20
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BLAST of EMLSAG00000001689 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self) Total hits: 1
BLAST of EMLSAG00000001689 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt) Total hits: 0
BLAST of EMLSAG00000001689 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods) Total hits: 0
BLAST of EMLSAG00000001689 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017)) Total hits: 0
BLAST of EMLSAG00000001689 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins) Total hits: 1
Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Cross References
External references for this gene
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at LSalAtl2s128:964109..966295+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>EMLSAG00000001689-684455 ID=EMLSAG00000001689-684455|Name=EMLSAG00000001689|organism=Lepeophtheirus salmonis|type=gene|length=2187bp|location=Sequence derived from alignment at LSalAtl2s128:964109..966295+ (Lepeophtheirus salmonis)back to top Add to Basket
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