EMLSAG00000001695, EMLSAG00000001695-684461 (gene) Lepeophtheirus salmonis
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Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of EMLSAG00000001695 vs. C. finmarchicus
Match: gi|592886710|gb|GAXK01071665.1| (TSA: Calanus finmarchicus comp733595_c0_seq4 transcribed RNA sequence) HSP 1 Score: 30.8018 bits (68), Expect = 3.819e+0 Identity = 22/66 (33.33%), Postives = 36/66 (54.55%), Query Frame = 0
Query: 21 FSIKSHKTKESMGPAKIIVNDGLAKKLLNLETAKGIYTVDQDHRVSIETNRMVNEV---LSKILDN 83
+S K + +E + +I DGLAKK++ LE K + T D H + +T + + + +KILDN
Sbjct: 371 YSSKRERVREEIARLEI-EQDGLAKKIVELEREKNMLT-DTRHMIETQTEKKLFQQKTEKAKILDN 562
BLAST of EMLSAG00000001695 vs. C. finmarchicus
Match: gi|592886711|gb|GAXK01071664.1| (TSA: Calanus finmarchicus comp733595_c0_seq3 transcribed RNA sequence) HSP 1 Score: 30.8018 bits (68), Expect = 3.867e+0 Identity = 22/66 (33.33%), Postives = 36/66 (54.55%), Query Frame = 0
Query: 21 FSIKSHKTKESMGPAKIIVNDGLAKKLLNLETAKGIYTVDQDHRVSIETNRMVNEV---LSKILDN 83
+S K + +E + +I DGLAKK++ LE K + T D H + +T + + + +KILDN
Sbjct: 371 YSSKRERVREEIARLEI-EQDGLAKKIVELEREKNMLT-DTRHMIETQTEKKLFQQKTEKAKILDN 562
BLAST of EMLSAG00000001695 vs. C. finmarchicus
Match: gi|592886713|gb|GAXK01071662.1| (TSA: Calanus finmarchicus comp733595_c0_seq1 transcribed RNA sequence) HSP 1 Score: 30.4166 bits (67), Expect = 4.794e+0 Identity = 22/66 (33.33%), Postives = 36/66 (54.55%), Query Frame = 0
Query: 21 FSIKSHKTKESMGPAKIIVNDGLAKKLLNLETAKGIYTVDQDHRVSIETNRMVNEV---LSKILDN 83
+S K + +E + +I DGLAKK++ LE K + T D H + +T + + + +KILDN
Sbjct: 533 YSSKRERVREEIARLEI-EQDGLAKKIVELEREKNMLT-DTRHMIETQTEKKLFQQKTEKAKILDN 724
BLAST of EMLSAG00000001695 vs. C. finmarchicus
Match: gi|592886712|gb|GAXK01071663.1| (TSA: Calanus finmarchicus comp733595_c0_seq2 transcribed RNA sequence) HSP 1 Score: 30.4166 bits (67), Expect = 4.994e+0 Identity = 22/66 (33.33%), Postives = 36/66 (54.55%), Query Frame = 0
Query: 21 FSIKSHKTKESMGPAKIIVNDGLAKKLLNLETAKGIYTVDQDHRVSIETNRMVNEV---LSKILDN 83
+S K + +E + +I DGLAKK++ LE K + T D H + +T + + + +KILDN
Sbjct: 533 YSSKRERVREEIARLEI-EQDGLAKKIVELEREKNMLT-DTRHMIETQTEKKLFQQKTEKAKILDN 724
BLAST of EMLSAG00000001695 vs. L. salmonis peptides
Match: EMLSAP00000001695 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1293:131921:133062:-1 gene:EMLSAG00000001695 transcript:EMLSAT00000001695 description:"maker-LSalAtl2s1293-snap-gene-0.20") HSP 1 Score: 446.047 bits (1146), Expect = 1.036e-160 Identity = 214/214 (100.00%), Postives = 214/214 (100.00%), Query Frame = 0
Query: 1 MNLMCSEFMEKIVDHHGSWIFSIKSHKTKESMGPAKIIVNDGLAKKLLNLETAKGIYTVDQDHRVSIETNRMVNEVLSKILDNGAYLESLKTNTEGLNWVHGIENDEENVQPPAPHPQTYARSLPSPPTGDGGDSGNFVPAKVSTRTYTDSERTHLSELFNCNGKAKINESTWQEALKSQWFINFIVRFSGLSLNRKKERVRKILSHFNKKKNN 214
MNLMCSEFMEKIVDHHGSWIFSIKSHKTKESMGPAKIIVNDGLAKKLLNLETAKGIYTVDQDHRVSIETNRMVNEVLSKILDNGAYLESLKTNTEGLNWVHGIENDEENVQPPAPHPQTYARSLPSPPTGDGGDSGNFVPAKVSTRTYTDSERTHLSELFNCNGKAKINESTWQEALKSQWFINFIVRFSGLSLNRKKERVRKILSHFNKKKNN
Sbjct: 1 MNLMCSEFMEKIVDHHGSWIFSIKSHKTKESMGPAKIIVNDGLAKKLLNLETAKGIYTVDQDHRVSIETNRMVNEVLSKILDNGAYLESLKTNTEGLNWVHGIENDEENVQPPAPHPQTYARSLPSPPTGDGGDSGNFVPAKVSTRTYTDSERTHLSELFNCNGKAKINESTWQEALKSQWFINFIVRFSGLSLNRKKERVRKILSHFNKKKNN 214
BLAST of EMLSAG00000001695 vs. L. salmonis peptides
Match: EMLSAP00000001841 (pep:novel supercontig:LSalAtl2s:LSalAtl2s131:12686:15163:-1 gene:EMLSAG00000001841 transcript:EMLSAT00000001841 description:"maker-LSalAtl2s131-augustus-gene-0.15") HSP 1 Score: 96.6709 bits (239), Expect = 2.747e-24 Identity = 55/122 (45.08%), Postives = 73/122 (59.84%), Query Frame = 0
Query: 98 NWVHGIENDEENVQPPAPHPQTYARSLPSPPTGDGGDSGNFVPAKV--STRTYTDSERTHLSELF---NCNGKA---KINESTWQEALKSQWFINFIVRFSGLSLNRKKERVRKILSHFNKK 211
+W +GIE+DEEN+Q PAPHPQT RSLPSPPTGD GDSGNFVP KV + +R L+ G + K+ S + L + + RF GL+LN KK+++RKIL + N +
Sbjct: 107 HWTYGIEDDEENIQAPAPHPQTSVRSLPSPPTGDDGDSGNFVPTKVLFFKIMFLRHQRAVFPLLWVMVPVGGNSVPIKVEGSNKRVHLSGITYKPIVGRFEGLALNCKKDKLRKILLNLNNR 228
BLAST of EMLSAG00000001695 vs. L. salmonis peptides
Match: EMLSAP00000008995 (pep:novel supercontig:LSalAtl2s:LSalAtl2s5641:3040:4160:-1 gene:EMLSAG00000008995 transcript:EMLSAT00000008995 description:"maker-LSalAtl2s5641-snap-gene-0.3") HSP 1 Score: 57.3806 bits (137), Expect = 4.116e-11 Identity = 32/48 (66.67%), Postives = 36/48 (75.00%), Query Frame = 0
Query: 1 MNLMCSEFMEKIVDHHGSWIFSIKSHKTKESMGPAKIIVNDGLAKKLL 48
MN+ SE+MEKI +G IFS KS+KTKESMG A IIVND LAK LL
Sbjct: 72 MNITSSEYMEKIKYCNGYRIFSSKSNKTKESMGTANIIVNDSLAKTLL 119 The following BLAST results are available for this feature:
BLAST of EMLSAG00000001695 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO) Total hits: 0
BLAST of EMLSAG00000001695 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA) Total hits: 4
BLAST of EMLSAG00000001695 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self) Total hits: 3
BLAST of EMLSAG00000001695 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt) Total hits: 0
BLAST of EMLSAG00000001695 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods) Total hits: 0
BLAST of EMLSAG00000001695 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017)) Total hits: 0
BLAST of EMLSAG00000001695 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins) Total hits: 0
Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Cross References
External references for this gene
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at LSalAtl2s1293:131921..133062- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>EMLSAG00000001695-684461 ID=EMLSAG00000001695-684461|Name=EMLSAG00000001695|organism=Lepeophtheirus salmonis|type=gene|length=1142bp|location=Sequence derived from alignment at LSalAtl2s1293:131921..133062- (Lepeophtheirus salmonis)back to top Add to Basket
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