EMLSAG00000001795, EMLSAG00000001795-684561 (gene) Lepeophtheirus salmonis

Overview
NameEMLSAG00000001795
Unique NameEMLSAG00000001795-684561
Typegene
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Homology
[Close]
BLAST of EMLSAG00000001795 vs. GO
Match: - (symbol:lsm4 "LSM4 homolog, U6 small nuclear RNA associated (S. cerevisiae)" species:7955 "Danio rerio" [GO:0003674 "molecular_function" evidence=ND] INTERPRO:IPR001163 ZFIN:ZDB-GENE-040426-1652 InterPro:IPR010920 SUPFAM:SSF50182 Pfam:PF01423 InterPro:IPR006649 SMART:SM00651 eggNOG:COG1958 HOVERGEN:HBG000486 CTD:25804 GeneTree:ENSGT00610000086173 HOGENOM:HOG000182713 KO:K12623 OMA:GMQQQKQ OrthoDB:EOG747PMG TreeFam:TF315027 InterPro:IPR027141 PANTHER:PTHR23338 EMBL:BX936438 EMBL:BC059435 EMBL:BC062285 RefSeq:NP_956990.1 UniGene:Dr.159006 STRING:7955.ENSDARP00000037344 Ensembl:ENSDART00000037824 GeneID:393669 KEGG:dre:393669 InParanoid:Q6P6E4 NextBio:20814675 PRO:PR:Q6P6E4 Uniprot:Q6P6E4)

HSP 1 Score: 169.859 bits (429), Expect = 6.171e-53
Identity = 76/90 (84.44%), Postives = 87/90 (96.67%), Query Frame = 0 
Query:    1 MLPLSLLRTAQNHPMLVELKNGETYNGHLVSCDNRMNISLKEVICTSRDGDRFWRMQECYIRGSTIKYLRIPDDVIEMVKDDVMTKGSGR 90
            MLPLSLL+TAQNHPMLVELKNGETYNGHLVSCDN MNI+L+EVICTSRDGD+FWRM ECYIRGSTIKYLRIPD++I+MVK++V++KG GR
Sbjct:    1 MLPLSLLKTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRMPECYIRGSTIKYLRIPDEIIDMVKEEVVSKGRGR 90
[Close]
BLAST of EMLSAG00000001795 vs. GO
Match: - (symbol:LSM4 "U6 snRNA-associated Sm-like protein LSm4" species:9606 "Homo sapiens" [GO:0000288 "nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay" evidence=TAS] [GO:0005515 "protein binding" evidence=IPI] [GO:0005681 "spliceosomal complex" evidence=IEA] [GO:0005688 "U6 snRNP" evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0006397 "mRNA processing" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0010467 "gene expression" evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS] [GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0030532 "small nuclear ribonucleoprotein complex" evidence=TAS] [GO:0043928 "exonucleolytic nuclear-transcribed mRNA catabolic process involved in deadenylation-dependent decay" evidence=TAS] [GO:0044822 "poly(A) RNA binding" evidence=IDA] Reactome:REACT_71 Reactome:REACT_21257 INTERPRO:IPR001163 GO:GO:0005829 GO:GO:0008380 GO:GO:0006397 GO:GO:0005681 GO:GO:0003723 InterPro:IPR010920 SUPFAM:SSF50182 GO:GO:0043928 GO:GO:0005688 Pfam:PF01423 InterPro:IPR006649 SMART:SM00651 eggNOG:COG1958 HOVERGEN:HBG000486 CTD:25804 HOGENOM:HOG000182713 KO:K12623 OMA:GMQQQKQ OrthoDB:EOG747PMG TreeFam:TF315027 InterPro:IPR027141 PANTHER:PTHR23338 EMBL:AJ238096 EMBL:AF182290 EMBL:AF117235 EMBL:AF251218 EMBL:BC000387 EMBL:BC003652 EMBL:BC022198 EMBL:BC023665 RefSeq:NP_036453.1 UniGene:Hs.515255 ProteinModelPortal:Q9Y4Z0 SMR:Q9Y4Z0 BioGrid:117336 DIP:DIP-31209N IntAct:Q9Y4Z0 MINT:MINT-1469332 STRING:9606.ENSP00000252816 PhosphoSite:Q9Y4Z0 DMDM:10720082 PaxDb:Q9Y4Z0 PeptideAtlas:Q9Y4Z0 PRIDE:Q9Y4Z0 DNASU:25804 Ensembl:ENST00000593829 GeneID:25804 KEGG:hsa:25804 UCSC:uc002niq.3 GeneCards:GC19M018417 HGNC:HGNC:17259 HPA:HPA040932 MIM:607284 neXtProt:NX_Q9Y4Z0 PharmGKB:PA134906569 InParanoid:Q9Y4Z0 PhylomeDB:Q9Y4Z0 ChiTaRS:LSM4 GeneWiki:LSM4 GenomeRNAi:25804 NextBio:47015 PRO:PR:Q9Y4Z0 ArrayExpress:Q9Y4Z0 Bgee:Q9Y4Z0 CleanEx:HS_LSM4 Genevestigator:Q9Y4Z0 Uniprot:Q9Y4Z0)

HSP 1 Score: 166.392 bits (420), Expect = 1.286e-51
Identity = 74/87 (85.06%), Postives = 84/87 (96.55%), Query Frame = 0 
Query:    1 MLPLSLLRTAQNHPMLVELKNGETYNGHLVSCDNRMNISLKEVICTSRDGDRFWRMQECYIRGSTIKYLRIPDDVIEMVKDDVMTKG 87
            MLPLSLL+TAQNHPMLVELKNGETYNGHLVSCDN MNI+L+EVICTSRDGD+FWRM ECYIRGSTIKYLRIPD++I+MVK++V+ KG
Sbjct:    1 MLPLSLLKTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRMPECYIRGSTIKYLRIPDEIIDMVKEEVVAKG 87
[Close]
BLAST of EMLSAG00000001795 vs. GO
Match: - (symbol:LSM4 "U6 snRNA-associated Sm-like protein LSm4" species:9913 "Bos taurus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0005681 "spliceosomal complex" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] INTERPRO:IPR001163 GO:GO:0008380 GO:GO:0006397 GO:GO:0005681 GO:GO:0003723 InterPro:IPR010920 SUPFAM:SSF50182 Pfam:PF01423 InterPro:IPR006649 SMART:SM00651 eggNOG:COG1958 HOVERGEN:HBG000486 EMBL:BC103243 RefSeq:NP_001030513.1 UniGene:Bt.49560 ProteinModelPortal:Q3ZBK6 SMR:Q3ZBK6 STRING:9913.ENSBTAP00000011312 PRIDE:Q3ZBK6 Ensembl:ENSBTAT00000011312 GeneID:613634 KEGG:bta:613634 CTD:25804 GeneTree:ENSGT00610000086173 HOGENOM:HOG000182713 InParanoid:Q3ZBK6 KO:K12623 OMA:GMQQQKQ OrthoDB:EOG747PMG TreeFam:TF315027 NextBio:20898680 InterPro:IPR027141 PANTHER:PTHR23338 Uniprot:Q3ZBK6)

HSP 1 Score: 166.392 bits (420), Expect = 1.286e-51
Identity = 74/87 (85.06%), Postives = 84/87 (96.55%), Query Frame = 0 
Query:    1 MLPLSLLRTAQNHPMLVELKNGETYNGHLVSCDNRMNISLKEVICTSRDGDRFWRMQECYIRGSTIKYLRIPDDVIEMVKDDVMTKG 87
            MLPLSLL+TAQNHPMLVELKNGETYNGHLVSCDN MNI+L+EVICTSRDGD+FWRM ECYIRGSTIKYLRIPD++I+MVK++V+ KG
Sbjct:    1 MLPLSLLKTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRMPECYIRGSTIKYLRIPDEIIDMVKEEVVAKG 87
[Close]
BLAST of EMLSAG00000001795 vs. GO
Match: - (symbol:Lsm4 "LSM4 homolog, U6 small nuclear RNA associated (S. cerevisiae)" species:10090 "Mus musculus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005654 "nucleoplasm" evidence=ISS] [GO:0005681 "spliceosomal complex" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0006397 "mRNA processing" evidence=IEA] [GO:0008150 "biological_process" evidence=ND] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0030529 "ribonucleoprotein complex" evidence=IEA] [GO:0044822 "poly(A) RNA binding" evidence=ISO] MGI:MGI:1354692 INTERPRO:IPR001163 GO:GO:0005737 GO:GO:0005654 GO:GO:0008380 GO:GO:0006397 GO:GO:0005681 GO:GO:0003723 InterPro:IPR010920 SUPFAM:SSF50182 Pfam:PF01423 InterPro:IPR006649 SMART:SM00651 eggNOG:COG1958 HOVERGEN:HBG000486 CTD:25804 KO:K12623 InterPro:IPR027141 PANTHER:PTHR23338 EMBL:AJ249439 RefSeq:NP_056631.2 UniGene:Mm.248188 ProteinModelPortal:Q9QXA5 SMR:Q9QXA5 DIP:DIP-60115N PhosphoSite:Q9QXA5 PaxDb:Q9QXA5 PRIDE:Q9QXA5 GeneID:50783 KEGG:mmu:50783 InParanoid:Q9QXA5 NextBio:307741 PRO:PR:Q9QXA5 ArrayExpress:Q9QXA5 Bgee:Q9QXA5 Genevestigator:Q9QXA5 Uniprot:Q9QXA5)

HSP 1 Score: 164.851 bits (416), Expect = 5.590e-51
Identity = 76/100 (76.00%), Postives = 87/100 (87.00%), Query Frame = 0 
Query:    1 MLPLSLLRTAQNHPMLVELKNGETYNGHLVSCDNRMNISLKEVICTSRDGDRFWRMQECYIRGSTIKYLRIPDDVIEMVKDDVMTKGSGRVGGRGRGRGG 100
            MLPLSLL+TAQNHPMLVELKNGETYNGHLVSCDN MNI+L+EVICTSRDGD+FWRM ECYIRGSTIKYLRIPD++I+MV+++           +GRGRGG
Sbjct:    1 MLPLSLLKTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRMPECYIRGSTIKYLRIPDEIIDMVREE---------AAKGRGRGG 91
[Close]
BLAST of EMLSAG00000001795 vs. GO
Match: - (symbol:CG17768 species:7227 "Drosophila melanogaster" [GO:0017070 "U6 snRNA binding" evidence=ISS] INTERPRO:IPR001163 EMBL:AE014134 InterPro:IPR010920 SUPFAM:SSF50182 Pfam:PF01423 InterPro:IPR006649 SMART:SM00651 GeneTree:ENSGT00610000086173 KO:K12623 OrthoDB:EOG747PMG InterPro:IPR027141 PANTHER:PTHR23338 UniGene:Dm.13910 EMBL:BT044323 RefSeq:NP_001027236.1 RefSeq:NP_001188778.1 MINT:MINT-774206 EnsemblMetazoa:FBtr0100253 EnsemblMetazoa:FBtr0304111 GeneID:3772012 KEGG:dme:Dmel_CG17768 UCSC:CG17768-RA FlyBase:FBgn0032240 InParanoid:Q9VKW8 OMA:NCDSWMN GenomeRNAi:3772012 NextBio:852113 PRO:PR:Q9VKW8 Uniprot:Q9VKW8)

HSP 1 Score: 162.54 bits (410), Expect = 5.860e-50
Identity = 72/91 (79.12%), Postives = 82/91 (90.11%), Query Frame = 0 
Query:    1 MLPLSLLRTAQNHPMLVELKNGETYNGHLVSCDNRMNISLKEVICTSRDGDRFWRMQECYIRGSTIKYLRIPDDVIEMVKDDVMTKGSGRV 91
            MLPLSLL+TAQ+HPMLVELKNGETYNGHLVSCD+ MNI+L++VICTS+DGDRFWRM ECYIRGSTIKYLRIPD+VI+MVK+D   K   R 
Sbjct:    1 MLPLSLLKTAQSHPMLVELKNGETYNGHLVSCDSWMNINLRDVICTSKDGDRFWRMPECYIRGSTIKYLRIPDEVIDMVKEDAQAKSRNRT 91
[Close]
BLAST of EMLSAG00000001795 vs. GO
Match: - (symbol:Lsm4 "LSM4 homolog, U6 small nuclear RNA associated (S. cerevisiae)" species:10116 "Rattus norvegicus" [GO:0044822 "poly(A) RNA binding" evidence=ISO] RGD:1306808 INTERPRO:IPR001163 InterPro:IPR010920 SUPFAM:SSF50182 EMBL:CH474031 Pfam:PF01423 InterPro:IPR006649 SMART:SM00651 CTD:25804 GeneTree:ENSGT00610000086173 KO:K12623 OMA:GMQQQKQ OrthoDB:EOG747PMG TreeFam:TF315027 InterPro:IPR027141 PANTHER:PTHR23338 EMBL:AABR06086857 RefSeq:NP_001099543.1 UniGene:Rn.27306 Ensembl:ENSRNOT00000026567 GeneID:290647 KEGG:rno:290647 UCSC:RGD:1306808 NextBio:631408 Uniprot:D4A2C6)

HSP 1 Score: 159.458 bits (402), Expect = 6.301e-49
Identity = 70/83 (84.34%), Postives = 80/83 (96.39%), Query Frame = 0 
Query:    1 MLPLSLLRTAQNHPMLVELKNGETYNGHLVSCDNRMNISLKEVICTSRDGDRFWRMQECYIRGSTIKYLRIPDDVIEMVKDDV 83
            MLPLSLL+TAQNHPMLVELKNGETYNGHLVSCDN MNI+L+EVICTSRDGD+FWRM ECYIRGSTIKYLRIPD++I+MV+++ 
Sbjct:    1 MLPLSLLKTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRMPECYIRGSTIKYLRIPDEIIDMVREEA 83
[Close]
BLAST of EMLSAG00000001795 vs. GO
Match: - (symbol:emb1644 "AT5G27720" species:3702 "Arabidopsis thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634 "nucleus" evidence=ISM;ISS] [GO:0005732 "small nucleolar ribonucleoprotein complex" evidence=ISS] [GO:0009793 "embryo development ending in seed dormancy" evidence=NAS] INTERPRO:IPR001163 EMBL:CP002688 InterPro:IPR010920 SUPFAM:SSF50182 Pfam:PF01423 InterPro:IPR006649 SMART:SM00651 KO:K12623 InterPro:IPR027141 PANTHER:PTHR23338 RefSeq:NP_198124.1 UniGene:At.43840 ProteinModelPortal:F4K4E3 SMR:F4K4E3 PRIDE:F4K4E3 EnsemblPlants:AT5G27720.1 GeneID:832834 KEGG:ath:AT5G27720 OMA:YQTNADG PRO:PR:F4K4E3 ArrayExpress:F4K4E3 Uniprot:F4K4E3)

HSP 1 Score: 147.132 bits (370), Expect = 2.942e-44
Identity = 65/82 (79.27%), Postives = 76/82 (92.68%), Query Frame = 0 
Query:    1 MLPLSLLRTAQNHPMLVELKNGETYNGHLVSCDNRMNISLKEVICTSRDGDRFWRMQECYIRGSTIKYLRIPDDVIEMVKDD 82
            MLPLSLL+TAQ HPMLVELKNGETYNGHLV+CD  MNI L+EVICTS+DGDRFWRM ECYIRG+TIKYLR+PD+VI+ V+++
Sbjct:    1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEE 82
[Close]
BLAST of EMLSAG00000001795 vs. GO
Match: - (symbol:lsm-4 species:6239 "Caenorhabditis elegans" [GO:0010171 "body morphogenesis" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0009792 "embryo development ending in birth or egg hatching" evidence=IMP] [GO:0008340 "determination of adult lifespan" evidence=IMP] [GO:0006898 "receptor-mediated endocytosis" evidence=IMP] [GO:0040027 "negative regulation of vulval development" evidence=IMP] [GO:0007281 "germ cell development" evidence=IMP] INTERPRO:IPR001163 GO:GO:0008380 GO:GO:0006397 GO:GO:0005681 GO:GO:0003723 InterPro:IPR010920 SUPFAM:SSF50182 Pfam:PF01423 InterPro:IPR006649 SMART:SM00651 eggNOG:COG1958 GeneTree:ENSGT00610000086173 HOGENOM:HOG000182713 KO:K12623 OMA:GMQQQKQ OrthoDB:EOG747PMG InterPro:IPR027141 PANTHER:PTHR23338 EMBL:FO080735 PIR:T16234 RefSeq:NP_495514.1 UniGene:Cel.6676 ProteinModelPortal:Q19952 SMR:Q19952 IntAct:Q19952 STRING:6239.F32A5.7 PaxDb:Q19952 PRIDE:Q19952 EnsemblMetazoa:F32A5.7 GeneID:174193 KEGG:cel:CELE_F32A5.7 UCSC:F32A5.7 CTD:3772280 WormBase:F32A5.7 InParanoid:Q19952 NextBio:882941 PRO:PR:Q19952 Uniprot:Q19952)

HSP 1 Score: 135.576 bits (340), Expect = 1.036e-39
Identity = 59/83 (71.08%), Postives = 74/83 (89.16%), Query Frame = 0 
Query:    1 MLPLSLLRTAQNHPMLVELKNGETYNGHLVSCDNRMNISLKEVICTSRDGDRFWRMQECYIRGSTIKYLRIPDDVIEMVKDDV 83
            +LPLSLL+TAQNHPMLVELKNGETYNGHL +CD+ MNI L +VI TS+DGD+F++M E Y+RGSTIKYLRIP+ V+++VK +V
Sbjct:    2 VLPLSLLKTAQNHPMLVELKNGETYNGHLKACDSWMNIHLVDVIFTSKDGDKFFKMSEAYVRGSTIKYLRIPETVVDLVKTEV 84
[Close]
BLAST of EMLSAG00000001795 vs. GO
Match: - (symbol:lsm-4 "Probable U6 snRNA-associated Sm-like protein LSm4" species:6239 "Caenorhabditis elegans" [GO:0003723 "RNA binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005681 "spliceosomal complex" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0030529 "ribonucleoprotein complex" evidence=IEA] INTERPRO:IPR001163 GO:GO:0008380 GO:GO:0006397 GO:GO:0005681 GO:GO:0003723 InterPro:IPR010920 SUPFAM:SSF50182 Pfam:PF01423 InterPro:IPR006649 SMART:SM00651 eggNOG:COG1958 GeneTree:ENSGT00610000086173 HOGENOM:HOG000182713 KO:K12623 OMA:GMQQQKQ OrthoDB:EOG747PMG InterPro:IPR027141 PANTHER:PTHR23338 EMBL:FO080735 PIR:T16234 RefSeq:NP_495514.1 UniGene:Cel.6676 ProteinModelPortal:Q19952 SMR:Q19952 IntAct:Q19952 STRING:6239.F32A5.7 PaxDb:Q19952 PRIDE:Q19952 EnsemblMetazoa:F32A5.7 GeneID:174193 KEGG:cel:CELE_F32A5.7 UCSC:F32A5.7 CTD:3772280 WormBase:F32A5.7 InParanoid:Q19952 NextBio:882941 PRO:PR:Q19952 Uniprot:Q19952)

HSP 1 Score: 135.576 bits (340), Expect = 1.036e-39
Identity = 59/83 (71.08%), Postives = 74/83 (89.16%), Query Frame = 0 
Query:    1 MLPLSLLRTAQNHPMLVELKNGETYNGHLVSCDNRMNISLKEVICTSRDGDRFWRMQECYIRGSTIKYLRIPDDVIEMVKDDV 83
            +LPLSLL+TAQNHPMLVELKNGETYNGHL +CD+ MNI L +VI TS+DGD+F++M E Y+RGSTIKYLRIP+ V+++VK +V
Sbjct:    2 VLPLSLLKTAQNHPMLVELKNGETYNGHLKACDSWMNIHLVDVIFTSKDGDKFFKMSEAYVRGSTIKYLRIPETVVDLVKTEV 84
[Close]
BLAST of EMLSAG00000001795 vs. GO
Match: - (symbol:lsm4 "putative U6 small nuclear ribonucleoparticle-associated protein" species:44689 "Dictyostelium discoideum" [GO:0005634 "nucleus" evidence=IEA] [GO:0030529 "ribonucleoprotein complex" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA] [GO:0005681 "spliceosomal complex" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA;ISS] [GO:0046540 "U4/U6 x U5 tri-snRNP complex" evidence=ISS] [GO:0006402 "mRNA catabolic process" evidence=ISS] [GO:0005732 "small nucleolar ribonucleoprotein complex" evidence=ISS] [GO:0005730 "nucleolus" evidence=ISS] [GO:0005688 "U6 snRNP" evidence=ISS] [GO:0000398 "mRNA splicing, via spliceosome" evidence=ISS] dictyBase:DDB_G0287053 INTERPRO:IPR001163 GO:GO:0005730 GO:GO:0005681 GO:GO:0003723 GO:GO:0006402 GO:GO:0000398 EMBL:AAFI02000096 InterPro:IPR010920 SUPFAM:SSF50182 GO:GO:0046540 GO:GO:0005732 GO:GO:0005688 Pfam:PF01423 InterPro:IPR006649 SMART:SM00651 eggNOG:COG1958 KO:K12623 InterPro:IPR027141 PANTHER:PTHR23338 RefSeq:XP_637396.1 ProteinModelPortal:Q54KX4 STRING:44689.DDB_0233378 EnsemblProtists:DDB0233378 GeneID:8625927 KEGG:ddi:DDB_G0287053 OMA:TIKYISV PRO:PR:Q54KX4 Uniprot:Q54KX4)

HSP 1 Score: 130.568 bits (327), Expect = 3.843e-37
Identity = 71/122 (58.20%), Postives = 89/122 (72.95%), Query Frame = 0 
Query:    1 MLPLSLLRTAQNHPMLVELKNGETYNGHLVSCDNRMNISLKEVICTSRDGDRFWRMQECYIRGSTIKYLRIPDDVIEMVKDDVMTKGSGRV----GGRGRGRG-GFNVGGRGRNRGGG-GRG 116
            MLPLSLLRT Q H ++VELKNGETYNG LV+CDN MNI+LK VI TS+D D+FW++Q CYIRG+TIKY+ +PD++I++V ++  T  +         RGRGRG GF   GRGR    G GRG
Sbjct:    1 MLPLSLLRTGQGHQIMVELKNGETYNGLLVNCDNWMNINLKNVIRTSKDSDKFWKIQSCYIRGNTIKYISVPDEIIDLVAEEEQTLRTTYQQRNDSNRGRGRGDGF--AGRGRGDASGRGRG 120
[Close]
BLAST of EMLSAG00000001795 vs. C. finmarchicus
Match: gi|592766292|gb|GAXK01188276.1| (TSA: Calanus finmarchicus comp10354_c0_seq2 transcribed RNA sequence)

HSP 1 Score: 161.77 bits (408), Expect = 1.073e-49
Identity = 75/86 (87.21%), Postives = 83/86 (96.51%), Query Frame = 0 
Query:    1 MLPLSLLRTAQNHPMLVELKNGETYNGHLVSCDNRMNISLKEVICTSRDGDRFWRMQECYIRGSTIKYLRIPDDVIEMVKDDVMTK 86
            MLPLSLLRTAQNHPMLVELKNGETYNGHLVSCDN MNI+L+EVICTSRDGD+FWRM ECYIRGS IKYLRIPD+VI+MVK+DV++K
Sbjct:   47 MLPLSLLRTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRMPECYIRGSNIKYLRIPDEVIDMVKEDVVSK 304
[Close]
BLAST of EMLSAG00000001795 vs. C. finmarchicus
Match: gi|592766293|gb|GAXK01188275.1| (TSA: Calanus finmarchicus comp10354_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 161.77 bits (408), Expect = 1.470e-49
Identity = 75/86 (87.21%), Postives = 83/86 (96.51%), Query Frame = 0 
Query:    1 MLPLSLLRTAQNHPMLVELKNGETYNGHLVSCDNRMNISLKEVICTSRDGDRFWRMQECYIRGSTIKYLRIPDDVIEMVKDDVMTK 86
            MLPLSLLRTAQNHPMLVELKNGETYNGHLVSCDN MNI+L+EVICTSRDGD+FWRM ECYIRGS IKYLRIPD+VI+MVK+DV++K
Sbjct:   82 MLPLSLLRTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRMPECYIRGSNIKYLRIPDEVIDMVKEDVVSK 339
[Close]
BLAST of EMLSAG00000001795 vs. C. finmarchicus
Match: gi|592891610|gb|GAXK01066765.1| (TSA: Calanus finmarchicus comp5249_c0_seq3 transcribed RNA sequence)

HSP 1 Score: 61.6178 bits (148), Expect = 6.556e-12
Identity = 31/85 (36.47%), Postives = 49/85 (57.65%), Query Frame = 0 
Query:    2 LPLSLLRTAQNHPMLVELKNGETYNGHLVSCDNRMNISLKEVICTSRDGDRFWRMQECYIRGSTIKYLRIPDDVIEMVKDDVMTK 86
            +P+ +L  A+ H + VE   GE Y G L+  ++ MN  +  V  T RDG R  +++  YIRGS I+++ +PD    M+K+  M K
Sbjct:  109 VPIKVLHEAEGHIVTVETTTGEVYRGKLIEAEDNMNSQMASVTVTYRDG-RVAQLENIYIRGSKIRFMILPD----MLKNAPMFK 348
[Close]
BLAST of EMLSAG00000001795 vs. C. finmarchicus
Match: gi|592891609|gb|GAXK01066766.1| (TSA: Calanus finmarchicus comp5249_c0_seq4 transcribed RNA sequence)

HSP 1 Score: 61.2326 bits (147), Expect = 6.732e-12
Identity = 31/85 (36.47%), Postives = 49/85 (57.65%), Query Frame = 0 
Query:    2 LPLSLLRTAQNHPMLVELKNGETYNGHLVSCDNRMNISLKEVICTSRDGDRFWRMQECYIRGSTIKYLRIPDDVIEMVKDDVMTK 86
            +P+ +L  A+ H + VE   GE Y G L+  ++ MN  +  V  T RDG R  +++  YIRGS I+++ +PD    M+K+  M K
Sbjct:  109 VPVKVLHEAEGHIVTVETTTGEVYRGKLIEAEDNMNSQMASVTVTYRDG-RVAQLENIYIRGSKIRFMILPD----MLKNAPMFK 348
[Close]
BLAST of EMLSAG00000001795 vs. C. finmarchicus
Match: gi|592891607|gb|GAXK01066768.1| (TSA: Calanus finmarchicus comp5249_c1_seq1 transcribed RNA sequence)

HSP 1 Score: 61.6178 bits (148), Expect = 1.089e-11
Identity = 31/85 (36.47%), Postives = 49/85 (57.65%), Query Frame = 0 
Query:    2 LPLSLLRTAQNHPMLVELKNGETYNGHLVSCDNRMNISLKEVICTSRDGDRFWRMQECYIRGSTIKYLRIPDDVIEMVKDDVMTK 86
            +P+ +L  A+ H + VE   GE Y G L+  ++ MN  +  V  T RDG R  +++  YIRGS I+++ +PD    M+K+  M K
Sbjct:  107 VPIKVLHEAEGHIVTVETTTGEVYRGKLIEAEDNMNSQMASVTVTYRDG-RVAQLENIYIRGSKIRFMILPD----MLKNAPMFK 346
[Close]
BLAST of EMLSAG00000001795 vs. C. finmarchicus
Match: gi|592891612|gb|GAXK01066763.1| (TSA: Calanus finmarchicus comp5249_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 61.6178 bits (148), Expect = 1.089e-11
Identity = 31/85 (36.47%), Postives = 49/85 (57.65%), Query Frame = 0 
Query:    2 LPLSLLRTAQNHPMLVELKNGETYNGHLVSCDNRMNISLKEVICTSRDGDRFWRMQECYIRGSTIKYLRIPDDVIEMVKDDVMTK 86
            +P+ +L  A+ H + VE   GE Y G L+  ++ MN  +  V  T RDG R  +++  YIRGS I+++ +PD    M+K+  M K
Sbjct:  340 VPIKVLHEAEGHIVTVETTTGEVYRGKLIEAEDNMNSQMASVTVTYRDG-RVAQLENIYIRGSKIRFMILPD----MLKNAPMFK 579
[Close]
BLAST of EMLSAG00000001795 vs. C. finmarchicus
Match: gi|592891606|gb|GAXK01066769.1| (TSA: Calanus finmarchicus comp5249_c1_seq2 transcribed RNA sequence)

HSP 1 Score: 61.2326 bits (147), Expect = 1.177e-11
Identity = 31/85 (36.47%), Postives = 49/85 (57.65%), Query Frame = 0 
Query:    2 LPLSLLRTAQNHPMLVELKNGETYNGHLVSCDNRMNISLKEVICTSRDGDRFWRMQECYIRGSTIKYLRIPDDVIEMVKDDVMTK 86
            +P+ +L  A+ H + VE   GE Y G L+  ++ MN  +  V  T RDG R  +++  YIRGS I+++ +PD    M+K+  M K
Sbjct:   50 VPVKVLHEAEGHIVTVETTTGEVYRGKLIEAEDNMNSQMASVTVTYRDG-RVAQLENIYIRGSKIRFMILPD----MLKNAPMFK 289
[Close]
BLAST of EMLSAG00000001795 vs. C. finmarchicus
Match: gi|592891611|gb|GAXK01066764.1| (TSA: Calanus finmarchicus comp5249_c0_seq2 transcribed RNA sequence)

HSP 1 Score: 61.2326 bits (147), Expect = 1.177e-11
Identity = 31/85 (36.47%), Postives = 49/85 (57.65%), Query Frame = 0 
Query:    2 LPLSLLRTAQNHPMLVELKNGETYNGHLVSCDNRMNISLKEVICTSRDGDRFWRMQECYIRGSTIKYLRIPDDVIEMVKDDVMTK 86
            +P+ +L  A+ H + VE   GE Y G L+  ++ MN  +  V  T RDG R  +++  YIRGS I+++ +PD    M+K+  M K
Sbjct:  340 VPVKVLHEAEGHIVTVETTTGEVYRGKLIEAEDNMNSQMASVTVTYRDG-RVAQLENIYIRGSKIRFMILPD----MLKNAPMFK 579
[Close]
BLAST of EMLSAG00000001795 vs. C. finmarchicus
Match: gi|592932356|gb|GAXK01026197.1| (TSA: Calanus finmarchicus comp18252_c0_seq4 transcribed RNA sequence)

HSP 1 Score: 48.9062 bits (115), Expect = 2.440e-7
Identity = 27/80 (33.75%), Postives = 46/80 (57.50%), Query Frame = 0 
Query:    1 MLPLSLLRTAQNHPMLVELKNGETYNGHLVSCDNRMNISLKEVICTSRDGDRFWRM---QECYIRGSTIKYLRIPDDVIE 77
            ML  S  ++     ++VELKN  +  G L S D  +NI L ++  T  D D++  M   + C+IRGS ++Y+++P D ++
Sbjct:   98 MLFYSFFKSLVGKDVVVELKNDLSICGTLHSVDQYLNIKLTDISVT--DPDKYPHMLSVKNCFIRGSVVRYVQLPGDEVD 331
[Close]
BLAST of EMLSAG00000001795 vs. C. finmarchicus
Match: gi|592932357|gb|GAXK01026196.1| (TSA: Calanus finmarchicus comp18252_c0_seq3 transcribed RNA sequence)

HSP 1 Score: 48.9062 bits (115), Expect = 2.576e-7
Identity = 27/80 (33.75%), Postives = 46/80 (57.50%), Query Frame = 0 
Query:    1 MLPLSLLRTAQNHPMLVELKNGETYNGHLVSCDNRMNISLKEVICTSRDGDRFWRM---QECYIRGSTIKYLRIPDDVIE 77
            ML  S  ++     ++VELKN  +  G L S D  +NI L ++  T  D D++  M   + C+IRGS ++Y+++P D ++
Sbjct:   98 MLFYSFFKSLVGKDVVVELKNDLSICGTLHSVDQYLNIKLTDISVT--DPDKYPHMLSVKNCFIRGSVVRYVQLPGDEVD 331
[Close]
BLAST of EMLSAG00000001795 vs. L. salmonis peptides
Match: EMLSAP00000001795 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1306:48190:49688:1 gene:EMLSAG00000001795 transcript:EMLSAT00000001795 description:"maker-LSalAtl2s1306-augustus-gene-0.33")

HSP 1 Score: 250.366 bits (638), Expect = 2.342e-86
Identity = 126/126 (100.00%), Postives = 126/126 (100.00%), Query Frame = 0 
Query:    1 MLPLSLLRTAQNHPMLVELKNGETYNGHLVSCDNRMNISLKEVICTSRDGDRFWRMQECYIRGSTIKYLRIPDDVIEMVKDDVMTKGSGRVGGRGRGRGGFNVGGRGRNRGGGGRGGSGNRGGGNR 126
            MLPLSLLRTAQNHPMLVELKNGETYNGHLVSCDNRMNISLKEVICTSRDGDRFWRMQECYIRGSTIKYLRIPDDVIEMVKDDVMTKGSGRVGGRGRGRGGFNVGGRGRNRGGGGRGGSGNRGGGNR
Sbjct:    1 MLPLSLLRTAQNHPMLVELKNGETYNGHLVSCDNRMNISLKEVICTSRDGDRFWRMQECYIRGSTIKYLRIPDDVIEMVKDDVMTKGSGRVGGRGRGRGGFNVGGRGRNRGGGGRGGSGNRGGGNR 126
[Close]
BLAST of EMLSAG00000001795 vs. L. salmonis peptides
Match: EMLSAP00000004431 (pep:novel supercontig:LSalAtl2s:LSalAtl2s231:23735:24214:-1 gene:EMLSAG00000004431 transcript:EMLSAT00000004431 description:"maker-LSalAtl2s231-augustus-gene-0.34")

HSP 1 Score: 64.3142 bits (155), Expect = 4.930e-14
Identity = 40/121 (33.06%), Postives = 60/121 (49.59%), Query Frame = 0 
Query:    2 LPLSLLRTAQNHPMLVELKNGETYNGHLVSCDNRMNISLKEVICTSRDGDRFWRMQECYIRGSTIKYLRIPDDVIEMVKDDVMTKGSGRVGGRGRGRGGFNVGGRGRNRGGGGRGGSGNRG 122
            +P+ +L  A+ H +  E  NGE Y G L+  ++ MN  +  V  T RDG    +++  YIRGS I+++ +PD    M+K+  M K  GR  G      G       R +   GRG +G  G
Sbjct:    5 VPIKVLHEAEGHIVTCETINGEVYRGRLIEAEDNMNCQMSSVSVTHRDGH-VSQLENIYIRGSKIRFMILPD----MLKNAPMFKNMGRGRGSAPAXAGRGKXAILREQAARGRGRAGPPG 120
[Close]
BLAST of EMLSAG00000001795 vs. SwissProt
Match: gi|10720082|sp|Q9Y4Z0.1|LSM4_HUMAN (RecName: Full=U6 snRNA-associated Sm-like protein LSm4; AltName: Full=Glycine-rich protein; Short=GRP >gi|109892572|sp|Q3ZBK6.1|LSM4_BOVIN RecName: Full=U6 snRNA-associated Sm-like protein LSm4)

HSP 1 Score: 166.392 bits (420), Expect = 4.125e-53
Identity = 74/87 (85.06%), Postives = 84/87 (96.55%), Query Frame = 0 
Query:    1 MLPLSLLRTAQNHPMLVELKNGETYNGHLVSCDNRMNISLKEVICTSRDGDRFWRMQECYIRGSTIKYLRIPDDVIEMVKDDVMTKG 87
            MLPLSLL+TAQNHPMLVELKNGETYNGHLVSCDN MNI+L+EVICTSRDGD+FWRM ECYIRGSTIKYLRIPD++I+MVK++V+ KG
Sbjct:    1 MLPLSLLKTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRMPECYIRGSTIKYLRIPDEIIDMVKEEVVAKG 87
[Close]
BLAST of EMLSAG00000001795 vs. SwissProt
Match: gi|10720074|sp|Q9QXA5.1|LSM4_MOUSE (RecName: Full=U6 snRNA-associated Sm-like protein LSm4)

HSP 1 Score: 164.851 bits (416), Expect = 1.814e-52
Identity = 76/100 (76.00%), Postives = 87/100 (87.00%), Query Frame = 0 
Query:    1 MLPLSLLRTAQNHPMLVELKNGETYNGHLVSCDNRMNISLKEVICTSRDGDRFWRMQECYIRGSTIKYLRIPDDVIEMVKDDVMTKGSGRVGGRGRGRGG 100
            MLPLSLL+TAQNHPMLVELKNGETYNGHLVSCDN MNI+L+EVICTSRDGD+FWRM ECYIRGSTIKYLRIPD++I+MV+++           +GRGRGG
Sbjct:    1 MLPLSLLKTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRMPECYIRGSTIKYLRIPDEIIDMVREE---------AAKGRGRGG 91
[Close]
BLAST of EMLSAG00000001795 vs. SwissProt
Match: gi|12230258|sp|Q43582.1|LSM4_TOBAC (RecName: Full=Probable U6 snRNA-associated Sm-like protein LSm4; AltName: Full=Glycine-rich protein 10; Short=GRP 10)

HSP 1 Score: 159.073 bits (401), Expect = 3.952e-50
Identity = 76/118 (64.41%), Postives = 92/118 (77.97%), Query Frame = 0 
Query:    1 MLPLSLLRTAQNHPMLVELKNGETYNGHLVSCDNRMNISLKEVICTSRDGDRFWRMQECYIRGSTIKYLRIPDDVIEMVKDDVMTKGSGRVG--GRGRGRGGFNVGGRGRNRGGGGRG 116
            MLPLSLL+TAQ HPMLVELKNGETYNGHLV+CD  MNI L+EVICTS+DGDRFWRM ECY+RG+TIKYLR+PD+VI+ V+++  ++   +    GR R RGG +    GR   G GRG
Sbjct:    1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYVRGNTIKYLRVPDEVIDKVQEEAKSRTDRKPPGVGRARARGGRDDSAVGRQPKGIGRG 118
[Close]
BLAST of EMLSAG00000001795 vs. SwissProt
Match: gi|745998020|sp|F4K4E3.1|LSM4_ARATH (RecName: Full=Sm-like protein LSM4; Short=AtLSM4; AltName: Full=Protein EMBRYO DEFECTIVE 1644; AltName: Full=U6 snRNA-associated Sm-like protein LSM4)

HSP 1 Score: 147.132 bits (370), Expect = 1.109e-45
Identity = 65/82 (79.27%), Postives = 76/82 (92.68%), Query Frame = 0 
Query:    1 MLPLSLLRTAQNHPMLVELKNGETYNGHLVSCDNRMNISLKEVICTSRDGDRFWRMQECYIRGSTIKYLRIPDDVIEMVKDD 82
            MLPLSLL+TAQ HPMLVELKNGETYNGHLV+CD  MNI L+EVICTS+DGDRFWRM ECYIRG+TIKYLR+PD+VI+ V+++
Sbjct:    1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEE 82
[Close]
BLAST of EMLSAG00000001795 vs. SwissProt
Match: gi|12230329|sp|Q9ZRU9.1|LSM4_FAGSY (RecName: Full=Probable U6 snRNA-associated Sm-like protein LSm4; AltName: Full=Glycine-rich protein 2)

HSP 1 Score: 146.362 bits (368), Expect = 4.136e-45
Identity = 63/87 (72.41%), Postives = 78/87 (89.66%), Query Frame = 0 
Query:    1 MLPLSLLRTAQNHPMLVELKNGETYNGHLVSCDNRMNISLKEVICTSRDGDRFWRMQECYIRGSTIKYLRIPDDVIEMVKDDVMTKG 87
            MLPLSLL+TAQ HPMLVELK+GETYNGHLV+CD  MNI L+EVICTS+DGDRFWRM +CYIRG+TIKYLR+PD+VI+ V+++  ++ 
Sbjct:    1 MLPLSLLKTAQGHPMLVELKSGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPDCYIRGNTIKYLRVPDEVIDKVQEETKSRA 87
[Close]
BLAST of EMLSAG00000001795 vs. SwissProt
Match: gi|12230291|sp|Q9LGE6.1|LSM4_ORYSJ (RecName: Full=Probable U6 snRNA-associated Sm-like protein LSm4)

HSP 1 Score: 145.976 bits (367), Expect = 6.419e-45
Identity = 64/83 (77.11%), Postives = 76/83 (91.57%), Query Frame = 0 
Query:    1 MLPLSLLRTAQNHPMLVELKNGETYNGHLVSCDNRMNISLKEVICTSRDGDRFWRMQECYIRGSTIKYLRIPDDVIEMVKDDV 83
            MLPLSLL+TAQ HPMLVELKNGETYNGHLV+CD  MNI L+EVICTS+DGD+FWRM ECYIRG+TIKYLR+PD+VI+ V+++ 
Sbjct:    1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDKFWRMPECYIRGNTIKYLRVPDEVIDKVQEET 83
[Close]
BLAST of EMLSAG00000001795 vs. SwissProt
Match: gi|74853183|sp|Q54KX4.1|LSM4_DICDI (RecName: Full=Probable U6 snRNA-associated Sm-like protein LSm4)

HSP 1 Score: 130.568 bits (327), Expect = 1.928e-38
Identity = 71/122 (58.20%), Postives = 89/122 (72.95%), Query Frame = 0 
Query:    1 MLPLSLLRTAQNHPMLVELKNGETYNGHLVSCDNRMNISLKEVICTSRDGDRFWRMQECYIRGSTIKYLRIPDDVIEMVKDDVMTKGSGRV----GGRGRGRG-GFNVGGRGRNRGGG-GRG 116
            MLPLSLLRT Q H ++VELKNGETYNG LV+CDN MNI+LK VI TS+D D+FW++Q CYIRG+TIKY+ +PD++I++V ++  T  +         RGRGRG GF   GRGR    G GRG
Sbjct:    1 MLPLSLLRTGQGHQIMVELKNGETYNGLLVNCDNWMNINLKNVIRTSKDSDKFWKIQSCYIRGNTIKYISVPDEIIDLVAEEEQTLRTTYQQRNDSNRGRGRGDGF--AGRGRGDASGRGRG 120
[Close]
BLAST of EMLSAG00000001795 vs. SwissProt
Match: gi|12230257|sp|Q19952.1|LSM4_CAEEL (RecName: Full=Probable U6 snRNA-associated Sm-like protein LSm4)

HSP 1 Score: 119.783 bits (299), Expect = 6.435e-35
Identity = 68/117 (58.12%), Postives = 85/117 (72.65%), Query Frame = 0 
Query:    1 MLPLSLLRTAQNHPMLVELKNGETYNGHLVSCDNRMNISLKEVICTSRDGDRFWRMQECYIRGSTIKYLRIPDDVIEMVKDDVMTKGSGRVGGRGRGRGGFNVGGRGRNRGGGGRGG 117
            +LPLSLL+TAQNHPMLVELKNGETYNGHL +CD+ MNI L +VI TS+DGD+F++M E Y+RGSTIKYLRIP+ V+++VK +V       V  + +        G GR   GG RGG
Sbjct:    2 VLPLSLLKTAQNHPMLVELKNGETYNGHLKACDSWMNIHLVDVIFTSKDGDKFFKMSEAYVRGSTIKYLRIPETVVDLVKTEV-----NEVRRQQQREQS-RGRGGGRGGRGGHRGG 112
[Close]
BLAST of EMLSAG00000001795 vs. SwissProt
Match: gi|12230213|sp|O14352.1|LSM4_SCHPO (RecName: Full=Probable U6 snRNA-associated Sm-like protein LSm4)

HSP 1 Score: 112.849 bits (281), Expect = 2.934e-32
Identity = 51/79 (64.56%), Postives = 64/79 (81.01%), Query Frame = 0 
Query:    1 MLPLSLLRTAQNHPMLVELKNGETYNGHLVSCDNRMNISLKEVICTSRDGDRFWRMQECYIRGSTIKYLRIPDDVIEMV 79
            MLPL+LL   Q  P+LVELKNGET+NGHL +CDN MN++L+EVI T  DGD+F+R+ ECYIRG+ IKYLRI D+V+  V
Sbjct:    1 MLPLTLLNATQGRPILVELKNGETFNGHLENCDNYMNLTLREVIRTMPDGDKFFRLPECYIRGNNIKYLRIQDEVLSQV 79
[Close]
BLAST of EMLSAG00000001795 vs. SwissProt
Match: gi|75264021|sp|Q9LM92.1|SMD3B_ARATH (RecName: Full=Small nuclear ribonucleoprotein SmD3b; Short=SmD3-b; AltName: Full=snRNP core protein D3-b)

HSP 1 Score: 68.1662 bits (165), Expect = 1.166e-14
Identity = 37/103 (35.92%), Postives = 60/103 (58.25%), Query Frame = 0 
Query:    2 LPLSLLRTAQNHPMLVELKNGETYNGHLVSCDNRMNISLKEVICTSRDGDRFWRMQECYIRGSTIKYLRIPDDV--IEMVKD-DVMTKGSGRVGGRGRGRGGF 101
            +P+ LL  A  H + VELK+GE Y G ++ C++  N  L+++  T++DG +  +++  +IRGS ++++ IPD +    M K  D   KG     G GRGRG  
Sbjct:    7 IPVKLLHEASGHIVTVELKSGELYRGSMIECEDNWNCQLEDITYTAKDG-KVSQLEHVFIRGSKVRFMVIPDILKHAPMFKRLDARIKGKSSSLGVGRGRGAM 108
[Close]
BLAST of EMLSAG00000001795 vs. Select Arthropod Genomes
Match: gb|EFA04447.2| (Small nuclear ribonucleoprotein Sm D3-like Protein [Tribolium castaneum])

HSP 1 Score: 173.326 bits (438), Expect = 3.246e-56
Identity = 92/126 (73.02%), Postives = 102/126 (80.95%), Query Frame = 0 
Query:    1 MLPLSLLRTAQNHPMLVELKNGETYNGHLVSCDNRMNISLKEVICTSRDGDRFWRMQECYIRGSTIKYLRIPDDVIEMVKDDVMTKGSGRVGGRGRGRGGFNVGGRGRNRGG-GGRGGSGNRGGGN 125
            MLPLSLLRTAQNHPMLVELKNGETYNGHLVSCDN MNI+L+EVICTSRDGD+FWRM ECYIRGSTIKYLRIPD+VI+MVK++ + K  GR   +G GRGG N   R   RG  GGR G   +GG N
Sbjct:    1 MLPLSLLRTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRMPECYIRGSTIKYLRIPDEVIDMVKEEAVVKNRGR-DMKG-GRGGQNQRNRPAARGNFGGRTGKPGQGGRN 124
[Close]
BLAST of EMLSAG00000001795 vs. Select Arthropod Genomes
Match: EFX67578.1 (hypothetical protein DAPPUDRAFT_218645 [Daphnia pulex])

HSP 1 Score: 170.244 bits (430), Expect = 5.410e-55
Identity = 78/90 (86.67%), Postives = 86/90 (95.56%), Query Frame = 0 
Query:    1 MLPLSLLRTAQNHPMLVELKNGETYNGHLVSCDNRMNISLKEVICTSRDGDRFWRMQECYIRGSTIKYLRIPDDVIEMVKDDVMTKGSGR 90
            MLPLSLLRTAQNHPMLVELKNGETYNGHLVSCDN MNI+L+EVICTS+DGDRFWRM ECYIRGSTIKYLRIPD+VI+MVK++V+ KG GR
Sbjct:    1 MLPLSLLRTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSKDGDRFWRMPECYIRGSTIKYLRIPDEVIDMVKEEVVAKGRGR 90
[Close]
BLAST of EMLSAG00000001795 vs. Select Arthropod Genomes
Match: XP_624908.3 (PREDICTED: U6 snRNA-associated Sm-like protein LSm4 [Apis mellifera])

HSP 1 Score: 168.318 bits (425), Expect = 4.001e-54
Identity = 77/90 (85.56%), Postives = 84/90 (93.33%), Query Frame = 0 
Query:    1 MLPLSLLRTAQNHPMLVELKNGETYNGHLVSCDNRMNISLKEVICTSRDGDRFWRMQECYIRGSTIKYLRIPDDVIEMVKDDVMTKGSGR 90
            MLPLSLLRTAQNHPMLVELKNGETYNGHLVSCD+ MNI+L+EVICTSRDGD+FWRM ECYIRGSTIKYLRIPD+VI+MVK+DV  K  GR
Sbjct:    1 MLPLSLLRTAQNHPMLVELKNGETYNGHLVSCDSWMNINLREVICTSRDGDKFWRMPECYIRGSTIKYLRIPDEVIDMVKEDVQMKSRGR 90
[Close]
BLAST of EMLSAG00000001795 vs. Select Arthropod Genomes
Match: ADV37028.1 (uncharacterized protein Dmel_CG17768, isoform B [Drosophila melanogaster])

HSP 1 Score: 162.54 bits (410), Expect = 9.637e-52
Identity = 72/91 (79.12%), Postives = 82/91 (90.11%), Query Frame = 0 
Query:    1 MLPLSLLRTAQNHPMLVELKNGETYNGHLVSCDNRMNISLKEVICTSRDGDRFWRMQECYIRGSTIKYLRIPDDVIEMVKDDVMTKGSGRV 91
            MLPLSLL+TAQ+HPMLVELKNGETYNGHLVSCD+ MNI+L++VICTS+DGDRFWRM ECYIRGSTIKYLRIPD+VI+MVK+D   K   R 
Sbjct:    1 MLPLSLLKTAQSHPMLVELKNGETYNGHLVSCDSWMNINLRDVICTSKDGDRFWRMPECYIRGSTIKYLRIPDEVIDMVKEDAQAKSRNRT 91
[Close]
BLAST of EMLSAG00000001795 vs. Select Arthropod Genomes
Match: AAF52938.3 (uncharacterized protein Dmel_CG17768, isoform A [Drosophila melanogaster])

HSP 1 Score: 162.54 bits (410), Expect = 9.637e-52
Identity = 72/91 (79.12%), Postives = 82/91 (90.11%), Query Frame = 0 
Query:    1 MLPLSLLRTAQNHPMLVELKNGETYNGHLVSCDNRMNISLKEVICTSRDGDRFWRMQECYIRGSTIKYLRIPDDVIEMVKDDVMTKGSGRV 91
            MLPLSLL+TAQ+HPMLVELKNGETYNGHLVSCD+ MNI+L++VICTS+DGDRFWRM ECYIRGSTIKYLRIPD+VI+MVK+D   K   R 
Sbjct:    1 MLPLSLLKTAQSHPMLVELKNGETYNGHLVSCDSWMNINLRDVICTSKDGDRFWRMPECYIRGSTIKYLRIPDEVIDMVKEDAQAKSRNRT 91
[Close]
BLAST of EMLSAG00000001795 vs. Select Arthropod Genomes
Match: EAA14138.4 (AGAP009687-PA [Anopheles gambiae str. PEST])

HSP 1 Score: 162.54 bits (410), Expect = 1.035e-51
Identity = 72/91 (79.12%), Postives = 83/91 (91.21%), Query Frame = 0 
Query:    1 MLPLSLLRTAQNHPMLVELKNGETYNGHLVSCDNRMNISLKEVICTSRDGDRFWRMQECYIRGSTIKYLRIPDDVIEMVKDDVMTKGSGRV 91
            MLPLSLL+TAQ+HPMLVELKNGETYNGHLVSCD  MNI+L+EVICTS+DGD+FWRM ECYIRGSTIKYLRIPD+VI+MVK+D+ +K   R 
Sbjct:    1 MLPLSLLKTAQSHPMLVELKNGETYNGHLVSCDTWMNINLREVICTSKDGDKFWRMPECYIRGSTIKYLRIPDEVIDMVKEDMQSKSRSRA 91
[Close]
BLAST of EMLSAG00000001795 vs. Select Arthropod Genomes
Match: gb|KPM06337.1| (U6 snRNA-associated Sm-like protein LSm4-like protein [Sarcoptes scabiei])

HSP 1 Score: 151.369 bits (381), Expect = 1.571e-47
Identity = 68/82 (82.93%), Postives = 76/82 (92.68%), Query Frame = 0 
Query:    1 MLPLSLLRTAQNHPMLVELKNGETYNGHLVSCDNRMNISLKEVICTSRDGDRFWRMQECYIRGSTIKYLRIPDDVIEMVKDD 82
            MLPL+LLRTAQNHPMLVELKNGETYNGHLVSCDN MNI+L+EVICTSRDGDRFWR+ E YIRG  IKYLRIPD+VI+MV ++
Sbjct:    1 MLPLTLLRTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDRFWRIPEVYIRGVNIKYLRIPDEVIDMVHEE 82
[Close]
BLAST of EMLSAG00000001795 vs. Select Arthropod Genomes
Match: EEB11846.1 (conserved hypothetical protein [Pediculus humanus corporis])

HSP 1 Score: 140.198 bits (352), Expect = 3.020e-43
Identity = 72/105 (68.57%), Postives = 81/105 (77.14%), Query Frame = 0 
Query:   15 MLVELKNGETYNGHLVSCDNRMNISLKEVICTSRDGDRFWRMQECYIRGSTIKYLRIPDDVIEMVKDDVMTKGSGR-----------VGGRGRGRGGFNVGGRGR 108
            MLVELKNGETYNGHLVSCDN MNI L+EVICTSRDGD+FWRM ECYIRGSTIKY+RIPD+VI+MVK++ + K  GR            GGRG GR  F  GGRG+
Sbjct:    1 MLVELKNGETYNGHLVSCDNWMNIILREVICTSRDGDKFWRMPECYIRGSTIKYVRIPDEVIDMVKEEAVLKSRGRGELKNRSNSNQRGGRGTGRNQF--GGRGK 103
[Close]
BLAST of EMLSAG00000001795 vs. Select Arthropod Genomes
Match: gb|EFA05269.2| (Small nuclear ribonucleoprotein Sm D3-like Protein [Tribolium castaneum])

HSP 1 Score: 74.3294 bits (181), Expect = 2.722e-17
Identity = 44/124 (35.48%), Postives = 66/124 (53.23%), Query Frame = 0 
Query:    2 LPLSLLRTAQNHPMLVELKNGETYNGHLVSCDNRMNISLKEVICTSRDGDRFWRMQECYIRGSTIKYLRIPDDVIEMVKDDVMTKGSGRVGGRGRGRGGF--NVGGRGRNRGG-----GGRGGS 118
            +P+ +L  A+ H +  E   GE Y G L+  ++ MN  + ++  T RDG R  +++  YIRGS I++L +PD    M+K+  M K   + G  GRG+         RGR RG      GGRGG+
Sbjct:    5 VPIKVLHEAEGHIVTCETITGEVYRGKLIEAEDNMNCQMTQITVTYRDG-RVAQLENVYIRGSKIRFLILPD----MLKNAPMFKKQTKAGTAGRGKSAILRAQAARGRGRGANPAVRGGRGGA 123
[Close]
BLAST of EMLSAG00000001795 vs. Select Arthropod Genomes
Match: gb|KFM65282.1| (Small nuclear ribonucleoprotein Sm D3, partial [Stegodyphus mimosarum])

HSP 1 Score: 69.707 bits (169), Expect = 1.445e-15
Identity = 42/115 (36.52%), Postives = 63/115 (54.78%), Query Frame = 0 
Query:    2 LPLSLLRTAQNHPMLVELKNGETYNGHLVSCDNRMNISLKEVICTSRDGDRFWRMQECYIRGSTIKYLRIPDDVIEMVKDDVMTKGSG-RVGGRGRGRGGFNV----GGRGRNRG 111
            +P+ +L  A+ H + +E K GE Y G LV  ++ MN  +  +  T RDG R  +++  YIRGS I++L +PD    M+K+  M K +G R+G    GRG   +      RGR R 
Sbjct:    5 VPVKVLHEAEGHIVTLETKTGEVYRGKLVEAEDNMNCQMSGITVTYRDG-RVAQLENIYIRGSKIRFLILPD----MLKNAPMFKKTGPRLGAASTGRGKSAILRAQAARGRGRA 114
[Close]
BLAST of EMLSAG00000001795 vs. nr
Match: gi|1131310922|gb|JAV05821.1| (putative small nuclear ribonucleoprotein snrnp [Nyssomyia neivai])

HSP 1 Score: 179.104 bits (453), Expect = 1.073e-55
Identity = 88/126 (69.84%), Postives = 98/126 (77.78%), Query Frame = 0 
Query:    1 MLPLSLLRTAQNHPMLVELKNGETYNGHLVSCDNRMNISLKEVICTSRDGDRFWRMQECYIRGSTIKYLRIPDDVIEMVKDDVMTKGSGRVGGRGRGRGGFNVGGRGRNRGGGGRGGSGNRGGGNR 126
            MLPLSLL+TAQ+HPMLVELKNGETYNGHLVSCD  MNI+L+EVICTS+DGDRFWRM ECYIRGSTIKYLRIPD+VI+MVK+DV  K   R     + RGG N   RGRN+       SG R  GNR
Sbjct:    1 MLPLSLLKTAQSHPMLVELKNGETYNGHLVSCDTWMNINLREVICTSKDGDRFWRMPECYIRGSTIKYLRIPDEVIDMVKEDVQQKTRSRQEMNKQNRGGQN--QRGRNQQNRNNAFSGRREQGNR 124
[Close]
BLAST of EMLSAG00000001795 vs. nr
Match: gi|357619535|gb|EHJ72069.1| (hypothetical protein KGM_17625 [Danaus plexippus])

HSP 1 Score: 178.718 bits (452), Expect = 1.360e-55
Identity = 94/129 (72.87%), Postives = 105/129 (81.40%), Query Frame = 0 
Query:    1 MLPLSLLRTAQNHPMLVELKNGETYNGHLVSCDNRMNISLKEVICTSRDGDRFWRMQECYIRGSTIKYLRIPDDVIEMVKDDVMTKGSGRVGGRGRGRGGFNV-GGRGRNRGGG---GRGGSGNRGGGN 125
            MLPLSLLRTAQNHPMLVELKNGETYNGHLVSCDN MNI+L+EVICTSRDGD+FWRM ECYIRGSTIKYLRIPD+VI+MVK++   K  GR G   +GRGG N+  GRG +RG     GR    +RGGGN
Sbjct:    1 MLPLSLLRTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRMPECYIRGSTIKYLRIPDEVIDMVKEETQVKSRGR-GEISKGRGGQNMRSGRGGSRGAFGNRGRAAPLSRGGGN 128
[Close]
BLAST of EMLSAG00000001795 vs. nr
Match: gi|1018646328|gb|AMY63174.1| (U6 snRNA-associated Sm-like protein LSm4 [Antheraea yamamai])

HSP 1 Score: 177.948 bits (450), Expect = 2.514e-55
Identity = 90/122 (73.77%), Postives = 99/122 (81.15%), Query Frame = 0 
Query:    1 MLPLSLLRTAQNHPMLVELKNGETYNGHLVSCDNRMNISLKEVICTSRDGDRFWRMQECYIRGSTIKYLRIPDDVIEMVKDDVMTKGSGRVGGRGRGRGGFNVGGRGRNRGGGGRGGSGNRG 122
            MLPLSLLRTAQNHPMLVELKNGETYNGHLVSCDN MNI+L+EVICTSRDGD+FWRM ECYIRGSTIKYLRIPD+VI+MVK++   K  GR     +GRGG N+    R   GG RG  GNRG
Sbjct:    1 MLPLSLLRTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRMPECYIRGSTIKYLRIPDEVIDMVKEETQVKARGRSEA-SKGRGGQNM----RTGRGGSRGAFGNRG 117
[Close]
BLAST of EMLSAG00000001795 vs. nr
Match: gi|1130253943|ref|XP_019767375.1| (PREDICTED: U6 snRNA-associated Sm-like protein LSm4 [Dendroctonus ponderosae] >gi|332376551|gb|AEE63415.1| unknown [Dendroctonus ponderosae])

HSP 1 Score: 176.792 bits (447), Expect = 6.680e-55
Identity = 89/126 (70.63%), Postives = 100/126 (79.37%), Query Frame = 0 
Query:    1 MLPLSLLRTAQNHPMLVELKNGETYNGHLVSCDNRMNISLKEVICTSRDGDRFWRMQECYIRGSTIKYLRIPDDVIEMVKDDVMTKGSGRVGGRGRGRGGFNVGGRGRNRGGGGRGGSGNRGGGNR 126
            MLPLSLLRTAQNHPMLVELKNGETYNGHLVSCDN MNI+L+EVICTSRDGD+FWRM ECYIRGSTIKYLRIPD+VI+MVK++ +TK       +G GRGG N   R R    G  GG  N+ GG +
Sbjct:    1 MLPLSLLRTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRMPECYIRGSTIKYLRIPDEVIDMVKEETVTKNKQSRDQKG-GRGGQN--QRNRPAARGNFGGRANKPGGQQ 123
[Close]
BLAST of EMLSAG00000001795 vs. nr
Match: gi|1080059804|ref|XP_018571807.1| (PREDICTED: U6 snRNA-associated Sm-like protein LSm4 [Anoplophora glabripennis])

HSP 1 Score: 176.407 bits (446), Expect = 1.167e-54
Identity = 91/127 (71.65%), Postives = 102/127 (80.31%), Query Frame = 0 
Query:    1 MLPLSLLRTAQNHPMLVELKNGETYNGHLVSCDNRMNISLKEVICTSRDGDRFWRMQECYIRGSTIKYLRIPDDVIEMVKDDVMTKGSGRVGGRGRGRGGFNVGGRGRNRG--GGGRGGSGNRGGGN 125
            MLPLSLLRTAQNHPMLVELKNGETYNGHLVSCDN MNI+L+EVICTSRDGD+FWRM ECYIRGSTIKYLRIPD+VI+MVK++ + K  GR   +G GR G N   R   RG  GG  G +G +GG N
Sbjct:    1 MLPLSLLRTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRMPECYIRGSTIKYLRIPDEVIDMVKEETVVKNRGRTDVKG-GRSGQNQRNRPAARGNFGGRAGKAGGQGGRN 126
[Close]
BLAST of EMLSAG00000001795 vs. nr
Match: gi|662206069|ref|XP_008476479.1| (PREDICTED: U6 snRNA-associated Sm-like protein LSm4 [Diaphorina citri])

HSP 1 Score: 175.637 bits (444), Expect = 1.646e-54
Identity = 91/125 (72.80%), Postives = 102/125 (81.60%), Query Frame = 0 
Query:    1 MLPLSLLRTAQNHPMLVELKNGETYNGHLVSCDNRMNISLKEVICTSRDGDRFWRMQECYIRGSTIKYLRIPDDVIEMVKDDVMTKGSGRVGGRGRGRGGFNVGGRGRNRGGGGRGGSGNRGGGN 125
            MLPLSLLRTAQNHPMLVELKNGETYNGHLV+CD+ MNI+L+EVICTSRDGD+FWRM ECYIRGS IKYLRIPD++I+MVK+D + +   R   RG GRGG N  GRG   G   RGG GNRGG N
Sbjct:    1 MLPLSLLRTAQNHPMLVELKNGETYNGHLVNCDHWMNINLREVICTSRDGDKFWRMPECYIRGSMIKYLRIPDEIIDMVKEDQVQRTRQRDSNRG-GRGGSNQRGRG---GHNMRGGLGNRGGKN 121
[Close]
BLAST of EMLSAG00000001795 vs. nr
Match: gi|13161882|emb|CAC33027.1| (Lsm4 protein [Takifugu rubripes])

HSP 1 Score: 173.711 bits (439), Expect = 1.438e-53
Identity = 86/125 (68.80%), Postives = 98/125 (78.40%), Query Frame = 0 
Query:    1 MLPLSLLRTAQNHPMLVELKNGETYNGHLVSCDNRMNISLKEVICTSRDGDRFWRMQECYIRGSTIKYLRIPDDVIEMVKDDVMTKGSGRVGGRGRGR---------GGFNVGGRGRNRGGGGRG 116
            MLPLSLL+TAQNHPMLVELKNGETYNGHLVSCDN MNI+L+EVICTSRDGD+FWRM ECYIRGSTIKYLRIPD++I+MVK+DV++KG GR G +   +              G RGR   G GRG
Sbjct:    1 MLPLSLLKTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRMPECYIRGSTIKYLRIPDEIIDMVKEDVLSKGRGRGGAQQNKQQGKGRGGAGRVGVFGSRGRGLTGPGRG 125
[Close]
BLAST of EMLSAG00000001795 vs. nr
Match: gi|642924778|ref|XP_008194436.1| (PREDICTED: U6 snRNA-associated Sm-like protein LSm4 [Tribolium castaneum] >gi|1004399778|gb|EFA04447.2| Small nuclear ribonucleoprotein Sm D3-like Protein [Tribolium castaneum])

HSP 1 Score: 173.326 bits (438), Expect = 1.588e-53
Identity = 92/126 (73.02%), Postives = 102/126 (80.95%), Query Frame = 0 
Query:    1 MLPLSLLRTAQNHPMLVELKNGETYNGHLVSCDNRMNISLKEVICTSRDGDRFWRMQECYIRGSTIKYLRIPDDVIEMVKDDVMTKGSGRVGGRGRGRGGFNVGGRGRNRGG-GGRGGSGNRGGGN 125
            MLPLSLLRTAQNHPMLVELKNGETYNGHLVSCDN MNI+L+EVICTSRDGD+FWRM ECYIRGSTIKYLRIPD+VI+MVK++ + K  GR   +G GRGG N   R   RG  GGR G   +GG N
Sbjct:    1 MLPLSLLRTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRMPECYIRGSTIKYLRIPDEVIDMVKEEAVVKNRGR-DMKG-GRGGQNQRNRPAARGNFGGRTGKPGQGGRN 124
[Close]
BLAST of EMLSAG00000001795 vs. nr
Match: gi|961827259|ref|XP_014883744.1| (PREDICTED: U6 snRNA-associated Sm-like protein LSm4 [Poecilia latipinna])

HSP 1 Score: 174.866 bits (442), Expect = 2.475e-53
Identity = 82/105 (78.10%), Postives = 95/105 (90.48%), Query Frame = 0 
Query:    1 MLPLSLLRTAQNHPMLVELKNGETYNGHLVSCDNRMNISLKEVICTSRDGDRFWRMQECYIRGSTIKYLRIPDDVIEMVKDDVMTKGSGRVGG-----RGRGRGG 100
            MLPLSLL+TAQNHPMLVELKNGETYNGHLVSCDN MNI+L+EVICTSRDGD+FWRM ECYIRGSTIKYLRIPD++I+MVK++V++KG GR G      +G+GRGG
Sbjct:   46 MLPLSLLKTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRMPECYIRGSTIKYLRIPDEIIDMVKEEVVSKGRGRGGAQQNKQQGKGRGG 150
[Close]
BLAST of EMLSAG00000001795 vs. nr
Match: gi|768421424|ref|XP_011551521.1| (PREDICTED: U6 snRNA-associated Sm-like protein LSm4 [Plutella xylostella])

HSP 1 Score: 172.555 bits (436), Expect = 2.658e-53
Identity = 87/117 (74.36%), Postives = 96/117 (82.05%), Query Frame = 0 
Query:    1 MLPLSLLRTAQNHPMLVELKNGETYNGHLVSCDNRMNISLKEVICTSRDGDRFWRMQECYIRGSTIKYLRIPDDVIEMVKDDVMTKGSGRVGGRGRGRGGFNVGGRGRNRGGGGRGG 117
            MLPLSLLRTAQNHPMLVELKNGETYNGHLVSCDN MNI+L+EVICTSRDGD+FWRM ECYIRGSTIKYLRIPD+VI+MVK++   K  GR     +GRGG      G+N   GGRGG
Sbjct:    1 MLPLSLLRTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRMPECYIRGSTIKYLRIPDEVIDMVKEETQVKARGR-SEVNKGRGG------GQNMRQGGRGG 110
[Close]
BLAST of EMLSAG00000001795 vs. Tigriopus kingsejongenis genes
Match: snap_masked-scaffold347_size200506-processed-gene-1.0 (protein:Tk02328 transcript:snap_masked-scaffold347_size200506-processed-gene-1.0-mRNA-1 annotation:"unknown")

HSP 1 Score: 165.622 bits (418), Expect = 1.654e-53
Identity = 74/86 (86.05%), Postives = 82/86 (95.35%), Query Frame = 0 
Query:    1 MLPLSLLRTAQNHPMLVELKNGETYNGHLVSCDNRMNISLKEVICTSRDGDRFWRMQECYIRGSTIKYLRIPDDVIEMVKDDVMTK 86
            MLPLSLLRTAQNHPMLVELKNGETYNGHLVSCDN MNI+L+EVICTS+DGDRFWRM ECY+RGSTIKYLRIPD+V++MVK+DV  K
Sbjct:    1 MLPLSLLRTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSKDGDRFWRMPECYVRGSTIKYLRIPDEVLDMVKEDVSNK 86
[Close]
BLAST of EMLSAG00000001795 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold722_size106786-snap-gene-0.28 (protein:Tk04285 transcript:maker-scaffold722_size106786-snap-gene-0.28-mRNA-1 annotation:"small nuclear ribonucleoprotein sm d3")

HSP 1 Score: 70.0922 bits (170), Expect = 1.407e-16
Identity = 43/108 (39.81%), Postives = 61/108 (56.48%), Query Frame = 0 
Query:    2 LPLSLLRTAQNHPMLVELKNGETYNGHLVSCDNRMNISLKEVICTSRDGDRFWRMQECYIRGSTIKYLRIPDDVIEMVKDDVMTKGSGRVGGRGRGRGGFNVGGRGRN 109
            +P+ +L  A+ H +  E  NGE Y G LV  ++ MN  +  V  T RDG R   ++  YIRGS +++L +PD    M+K+  M K  GR GGRG G  G    GRG++
Sbjct:   16 VPIKVLHEAEGHIVTCETINGEVYRGRLVEAEDNMNCQMTSVTVTYRDG-RVATLENIYIRGSKVRFLILPD----MLKNAPMFKNMGR-GGRGAGNTG--AAGRGKS 115
The following BLAST results are available for this feature:
BLAST of EMLSAG00000001795 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO)
Total hits: 25
Match NameE-valueIdentityDescription
-6.171e-5384.44symbol:lsm4 "LSM4 homolog, U6 small nuclear RNA as... [more]
-1.286e-5185.06symbol:LSM4 "U6 snRNA-associated Sm-like protein L... [more]
-1.286e-5185.06symbol:LSM4 "U6 snRNA-associated Sm-like protein L... [more]
-5.590e-5176.00symbol:Lsm4 "LSM4 homolog, U6 small nuclear RNA as... [more]
-5.860e-5079.12symbol:CG17768 species:7227 "Drosophila melanogast... [more]
-6.301e-4984.34symbol:Lsm4 "LSM4 homolog, U6 small nuclear RNA as... [more]
-2.942e-4479.27symbol:emb1644 "AT5G27720" species:3702 "Arabidops... [more]
-1.036e-3971.08symbol:lsm-4 species:6239 "Caenorhabditis elegans"... [more]
-1.036e-3971.08symbol:lsm-4 "Probable U6 snRNA-associated Sm-like... [more]
-3.843e-3758.20symbol:lsm4 "putative U6 small nuclear ribonucleop... [more]

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BLAST of EMLSAG00000001795 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA)
Total hits: 20
Match NameE-valueIdentityDescription
gi|592766292|gb|GAXK01188276.1|1.073e-4987.21TSA: Calanus finmarchicus comp10354_c0_seq2 transc... [more]
gi|592766293|gb|GAXK01188275.1|1.470e-4987.21TSA: Calanus finmarchicus comp10354_c0_seq1 transc... [more]
gi|592891610|gb|GAXK01066765.1|6.556e-1236.47TSA: Calanus finmarchicus comp5249_c0_seq3 transcr... [more]
gi|592891609|gb|GAXK01066766.1|6.732e-1236.47TSA: Calanus finmarchicus comp5249_c0_seq4 transcr... [more]
gi|592891607|gb|GAXK01066768.1|1.089e-1136.47TSA: Calanus finmarchicus comp5249_c1_seq1 transcr... [more]
gi|592891612|gb|GAXK01066763.1|1.089e-1136.47TSA: Calanus finmarchicus comp5249_c0_seq1 transcr... [more]
gi|592891606|gb|GAXK01066769.1|1.177e-1136.47TSA: Calanus finmarchicus comp5249_c1_seq2 transcr... [more]
gi|592891611|gb|GAXK01066764.1|1.177e-1136.47TSA: Calanus finmarchicus comp5249_c0_seq2 transcr... [more]
gi|592932356|gb|GAXK01026197.1|2.440e-733.75TSA: Calanus finmarchicus comp18252_c0_seq4 transc... [more]
gi|592932357|gb|GAXK01026196.1|2.576e-733.75TSA: Calanus finmarchicus comp18252_c0_seq3 transc... [more]

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BLAST of EMLSAG00000001795 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self)
Total hits: 2
Match NameE-valueIdentityDescription
EMLSAP000000017952.342e-86100.00pep:novel supercontig:LSalAtl2s:LSalAtl2s1306:4819... [more]
EMLSAP000000044314.930e-1433.06pep:novel supercontig:LSalAtl2s:LSalAtl2s231:23735... [more]
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BLAST of EMLSAG00000001795 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt)
Total hits: 17
Match NameE-valueIdentityDescription
gi|10720082|sp|Q9Y4Z0.1|LSM4_HUMAN4.125e-5385.06RecName: Full=U6 snRNA-associated Sm-like protein ... [more]
gi|10720074|sp|Q9QXA5.1|LSM4_MOUSE1.814e-5276.00RecName: Full=U6 snRNA-associated Sm-like protein ... [more]
gi|12230258|sp|Q43582.1|LSM4_TOBAC3.952e-5064.41RecName: Full=Probable U6 snRNA-associated Sm-like... [more]
gi|745998020|sp|F4K4E3.1|LSM4_ARATH1.109e-4579.27RecName: Full=Sm-like protein LSM4; Short=AtLSM4; ... [more]
gi|12230329|sp|Q9ZRU9.1|LSM4_FAGSY4.136e-4572.41RecName: Full=Probable U6 snRNA-associated Sm-like... [more]
gi|12230291|sp|Q9LGE6.1|LSM4_ORYSJ6.419e-4577.11RecName: Full=Probable U6 snRNA-associated Sm-like... [more]
gi|74853183|sp|Q54KX4.1|LSM4_DICDI1.928e-3858.20RecName: Full=Probable U6 snRNA-associated Sm-like... [more]
gi|12230257|sp|Q19952.1|LSM4_CAEEL6.435e-3558.12RecName: Full=Probable U6 snRNA-associated Sm-like... [more]
gi|12230213|sp|O14352.1|LSM4_SCHPO2.934e-3264.56RecName: Full=Probable U6 snRNA-associated Sm-like... [more]
gi|75264021|sp|Q9LM92.1|SMD3B_ARATH1.166e-1435.92RecName: Full=Small nuclear ribonucleoprotein SmD3... [more]

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BLAST of EMLSAG00000001795 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods)
Total hits: 23
Match NameE-valueIdentityDescription
gb|EFA04447.2|3.246e-5673.02Small nuclear ribonucleoprotein Sm D3-like Protein... [more]
EFX67578.15.410e-5586.67hypothetical protein DAPPUDRAFT_218645 [Daphnia pu... [more]
XP_624908.34.001e-5485.56PREDICTED: U6 snRNA-associated Sm-like protein LSm... [more]
ADV37028.19.637e-5279.12uncharacterized protein Dmel_CG17768, isoform B [D... [more]
AAF52938.39.637e-5279.12uncharacterized protein Dmel_CG17768, isoform A [D... [more]
EAA14138.41.035e-5179.12AGAP009687-PA [Anopheles gambiae str. PEST][more]
gb|KPM06337.1|1.571e-4782.93U6 snRNA-associated Sm-like protein LSm4-like prot... [more]
EEB11846.13.020e-4368.57conserved hypothetical protein [Pediculus humanus ... [more]
gb|EFA05269.2|2.722e-1735.48Small nuclear ribonucleoprotein Sm D3-like Protein... [more]
gb|KFM65282.1|1.445e-1536.52Small nuclear ribonucleoprotein Sm D3, partial [St... [more]

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BLAST of EMLSAG00000001795 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017))
Total hits: 25
Match NameE-valueIdentityDescription
gi|1131310922|gb|JAV05821.1|1.073e-5569.84putative small nuclear ribonucleoprotein snrnp [Ny... [more]
gi|357619535|gb|EHJ72069.1|1.360e-5572.87hypothetical protein KGM_17625 [Danaus plexippus][more]
gi|1018646328|gb|AMY63174.1|2.514e-5573.77U6 snRNA-associated Sm-like protein LSm4 [Antherae... [more]
gi|1130253943|ref|XP_019767375.1|6.680e-5570.63PREDICTED: U6 snRNA-associated Sm-like protein LSm... [more]
gi|1080059804|ref|XP_018571807.1|1.167e-5471.65PREDICTED: U6 snRNA-associated Sm-like protein LSm... [more]
gi|662206069|ref|XP_008476479.1|1.646e-5472.80PREDICTED: U6 snRNA-associated Sm-like protein LSm... [more]
gi|13161882|emb|CAC33027.1|1.438e-5368.80Lsm4 protein [Takifugu rubripes][more]
gi|642924778|ref|XP_008194436.1|1.588e-5373.02PREDICTED: U6 snRNA-associated Sm-like protein LSm... [more]
gi|961827259|ref|XP_014883744.1|2.475e-5378.10PREDICTED: U6 snRNA-associated Sm-like protein LSm... [more]
gi|768421424|ref|XP_011551521.1|2.658e-5374.36PREDICTED: U6 snRNA-associated Sm-like protein LSm... [more]

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BLAST of EMLSAG00000001795 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins)
Total hits: 2
Match NameE-valueIdentityDescription
snap_masked-scaffold347_size200506-processed-gene-1.01.654e-5386.05protein:Tk02328 transcript:snap_masked-scaffold347... [more]
maker-scaffold722_size106786-snap-gene-0.281.407e-1639.81protein:Tk04285 transcript:maker-scaffold722_size1... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1306supercontigLSalAtl2s1306:48190..49688 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Blast vs. GO2014-04-02
TblastN vs C. finmarchicus TSA2014-05-09
Blastp vs. self2014-05-10
Blastp vs. SwissProt2017-02-10
Blastp vs. Selected Arthropods2017-02-20
Blastp vs. NR (2/2017)2017-02-20
Blastp vs. Tigriopus kingsejongensis proteins2018-04-18
Properties
Property NameValue
Logic nameensemblgenomes
Descriptionmaker-LSalAtl2s1306-augustus-gene-0.33
Biotypeprotein_coding
EvidenceIEA
NoteU6 snRNA-associated Sm-like protein LSm4
Cross References
External references for this gene
DatabaseAccession
Ensembl Metazoa (gene)EMLSAG00000001795 (primary cross-reference)
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
EMLSAT00000001795EMLSAT00000001795-697642Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at LSalAtl2s1306:48190..49688+

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAG00000001795-684561 ID=EMLSAG00000001795-684561|Name=EMLSAG00000001795|organism=Lepeophtheirus salmonis|type=gene|length=1499bp|location=Sequence derived from alignment at LSalAtl2s1306:48190..49688+ (Lepeophtheirus salmonis)
CCTAGGAAATAACTTACTTTAAGTCATATACTATGACGTCACTAAATAAC
CTCTAATTTCACTAGCTGATTGTAGAGGAATGTGTATGGTGACGTCATAA
AACAAACTCTCTTCATTTTAATATATTTTTATAATTTCAAGTTAACATAA
TTTCGATTTTCATACATTTTAATAGAAAAATGCTTCCGCTATCCTTACTT
CGGACAGCTCAGAACCATCCAATGTTGGTAGAGCTTAAGAATGGTGAGAC
TTATAATGGACATTTAGTTTCCTGTGATAATCGAATGAATATAAGTTTGA
AGGAAGTGATTTGTACATCCAGGGACGGAGATCGCTTTTGGCGTATGCAA
GAGTGCTACATTCGAGGATCCACCATTAAATATCTACGTATTCCAGACGA
TGTAATTAATTATCTTATTTTAAGTATATGCTATATAGCTAGTGACATGT
AGATTTGGGTTCATTGGTTTATAACTAGATATGGAAAAGAGACCAAATTA
GTTCATATCTCACCTTGAATAGTATACCATGCTTTTATGCAATTTATTGG
AGAATAAACGGTGGTTTTTGGTCATGAATAGTGTAATAACATGTGGTGCG
TCAACACAAAAAACAATCTTGAATTAATATCTTGAAAGGGAGAGATTCCC
AATGTATTAAATCCAATTGCATACAGGCTAATATATCATAAACATATTTG
TCTCAATTATAAGCTTTGTATTCCTGGGATTATTTAAGATATCCAATAAT
GTTTACTATTGTTTAAAACAATCATTTGATTTATGTGATTTAAATTTTTG
TCCCCGATAATATCACCCCTTTAAAATTGAGTTATGTATCCTTAAAATTA
TGAAAGGGGATTTTCTTGGAACCTTTAAGTGTGTAATTTGAGGTGCATTC
AAAGGATTAATTATAATATTTCATTAACAGAAATAGAAAATAATTAGGTG
AACAATACAATTTCAAATTCAATTTAGACACTAAATCATTTTTGCTTGTG
CTGACGAGTCGTATATATAACTTAAATTTTATTTGTTAATTTATGAAGTT
GATTACTTCATCAGCGATAAAATAAGTGTAAATTTTAATTTTATAAAAAT
GATTTGTACTAAATTGCTGATCGTTTAAAATCCATGATAATAATTTTTTA
GTTACACTCTAAAAACTTACTTTCTTTAATTTAGGTCATTGAAATGGTGA
AGGACGACGTTATGACAAAGGGATCTGGACGCGTTGGAGGCCGTGGAAGA
GGMCGTGGAGGATTTAATGTTGGAGGCCGTGGCCGTAATAGAGGAGGNGG
TGGTCGTGGTGGATCTGGTAATCGTGGAGGAGGGAATCGCTAAATTTGTA
AATGAGGAGGAGGTCAATAAATAAAAATAACTCCCTTGTACAAATATTTG
ATGCATATATATTTCATATGACAAAATAATAATAATCATCATATTAATAA
ATGCTCCGAAGTTATGTGATGAAACGATGGCGAACAAGGTGACGTTATT
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