EMLSAG00000001862, EMLSAG00000001862-684628 (gene) Lepeophtheirus salmonis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of EMLSAG00000001862 vs. GO
Match: - (symbol:az2 "az2" species:7227 "Drosophila melanogaster" [GO:0008270 "zinc ion binding" evidence=ISM] [GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS] [GO:0006355 "regulation of transcription, DNA-templated" evidence=ISS] [GO:0005575 "cellular_component" evidence=ND] [GO:0046872 "metal ion binding" evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA] Pfam:PF00096 InterPro:IPR007087 InterPro:IPR013087 PROSITE:PS00028 PROSITE:PS50157 InterPro:IPR015880 InterPro:IPR006578 EMBL:AE013599 GO:GO:0008270 GO:GO:0003700 GO:GO:0003676 SMART:SM00355 Gene3D:3.30.160.60 Pfam:PF10545 PROSITE:PS51029 FlyBase:FBgn0025185 GeneTree:ENSGT00740000115905 EMBL:BT021301 RefSeq:NP_610289.2 UniGene:Dm.8028 EnsemblMetazoa:FBtr0088980 GeneID:35682 KEGG:dme:Dmel_CG1605 UCSC:CG1605-RA CTD:35682 InParanoid:Q5BIC3 OMA:PRITQFI GenomeRNAi:35682 NextBio:794701 Uniprot:Q5BIC3) HSP 1 Score: 50.8322 bits (120), Expect = 1.302e-5 Identity = 65/258 (25.19%), Postives = 107/258 (41.47%), Query Frame = 0 Query: 19 SRLIRFYRKHDLLWRMDNQFYRNKEKRYQTKRELVDNFNGKFSIHT----LEKCFHSL-----------RTCQLREIKKIQHGVHIKRKWKFFDELSFLQ-----ENNGVGRNKVMLESFEKSLLIQF---YKNNPLLWNPNHPNFTNDNVRNK--------LLSQFAIDLG---DKMDTEELKMEWHSLYQIFKREKEKILKSRQCGSATVSNW-------SFFTEMDFLNKLNDELTIDSVTFTENILNYNNLTSH 235 ++ I Y++ LW ++ YR+KEKR EL++ ++H L+KC SL +T +L ++ HG K+ F E L+ + +G G+ K++ E L QF Y P L++P H +F N NVR L S+F++ L D D+ + +W+S + K L QC +++ SF F KL E+ S + T++ L + H Sbjct: 155 TQFIELYKQQTCLWDPADESYRDKEKRANAYEELLEQLKATVNLHLTAYKLKKCITSLHAQYASISRQKKTQKLTKVPLYYHG-----KYSFLAERGSLEDADSDDVDGDGKIKLVFTE-ENQLTTQFIDLYSKFPQLYDPAHKHFCNLNVRKSSLIEITDLLTSEFSLGLVTHYDVYDSIQSMRQWYS-------RRIKTLTDVQCVGLSLAEKQYIERCNSFMPTKSFRQKLKCEVCEHSFS-TDHALQAHQFRDH 398
BLAST of EMLSAG00000001862 vs. C. finmarchicus
Match: gi|592807640|gb|GAXK01146928.1| (TSA: Calanus finmarchicus comp7106881_c0_seq1 transcribed RNA sequence) HSP 1 Score: 33.8834 bits (76), Expect = 5.373e-1 Identity = 20/56 (35.71%), Postives = 30/56 (53.57%), Query Frame = 0 Query: 256 DDIQIKEESNRSISPDLVDVNHHFYENTNQSKFLEPFVTENAHIFGKMVSSNLLQY 311 DD+ + N S S + +D N +FY N + + L F EN H+FG M +S+ Y Sbjct: 178 DDLTMPGGVNVSFS-NSIDPNGYFYTNKDGDEVLITFNHENGHMFGSMKTSSGKSY 342
BLAST of EMLSAG00000001862 vs. C. finmarchicus
Match: gi|592893821|gb|GAXK01064554.1| (TSA: Calanus finmarchicus comp585145_c0_seq1 transcribed RNA sequence) HSP 1 Score: 33.8834 bits (76), Expect = 1.225e+0 Identity = 29/93 (31.18%), Postives = 36/93 (38.71%), Query Frame = 0 Query: 196 VSNWSFFTEMDFLNKLNDELTIDSVTFTE-----NILNYNNLTSHDYYSTNGSSNSKKRKTSQGLDDIQIKEESNRSISPDLVDVNHHFYENT 283 ++ W F D L + F +NYN L H S KK K S + +IK S SIS DLV VNH +EN Sbjct: 1241 ITGWDFLETNDLWTGLEQLAKVLKTAFISASDKMTTINYNTLAIHREIVYMARSAFKKDKLSLLENTEKIKALS--SISRDLVRVNHELFENA 1513
BLAST of EMLSAG00000001862 vs. L. salmonis peptides
Match: EMLSAP00000001862 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1320:32251:33342:-1 gene:EMLSAG00000001862 transcript:EMLSAT00000001862 description:"augustus_masked-LSalAtl2s1320-processed-gene-0.2") HSP 1 Score: 748.043 bits (1930), Expect = 0.000e+0 Identity = 363/363 (100.00%), Postives = 363/363 (100.00%), Query Frame = 0 Query: 1 MSYNVEEQEITKLDDEEKSRLIRFYRKHDLLWRMDNQFYRNKEKRYQTKRELVDNFNGKFSIHTLEKCFHSLRTCQLREIKKIQHGVHIKRKWKFFDELSFLQENNGVGRNKVMLESFEKSLLIQFYKNNPLLWNPNHPNFTNDNVRNKLLSQFAIDLGDKMDTEELKMEWHSLYQIFKREKEKILKSRQCGSATVSNWSFFTEMDFLNKLNDELTIDSVTFTENILNYNNLTSHDYYSTNGSSNSKKRKTSQGLDDIQIKEESNRSISPDLVDVNHHFYENTNQSKFLEPFVTENAHIFGKMVSSNLLQYDPKYWSMLKKKIMEVFVDFEENNAGAFRQSMLGVDIPETNLYSPSEENYSDN 363 MSYNVEEQEITKLDDEEKSRLIRFYRKHDLLWRMDNQFYRNKEKRYQTKRELVDNFNGKFSIHTLEKCFHSLRTCQLREIKKIQHGVHIKRKWKFFDELSFLQENNGVGRNKVMLESFEKSLLIQFYKNNPLLWNPNHPNFTNDNVRNKLLSQFAIDLGDKMDTEELKMEWHSLYQIFKREKEKILKSRQCGSATVSNWSFFTEMDFLNKLNDELTIDSVTFTENILNYNNLTSHDYYSTNGSSNSKKRKTSQGLDDIQIKEESNRSISPDLVDVNHHFYENTNQSKFLEPFVTENAHIFGKMVSSNLLQYDPKYWSMLKKKIMEVFVDFEENNAGAFRQSMLGVDIPETNLYSPSEENYSDN Sbjct: 1 MSYNVEEQEITKLDDEEKSRLIRFYRKHDLLWRMDNQFYRNKEKRYQTKRELVDNFNGKFSIHTLEKCFHSLRTCQLREIKKIQHGVHIKRKWKFFDELSFLQENNGVGRNKVMLESFEKSLLIQFYKNNPLLWNPNHPNFTNDNVRNKLLSQFAIDLGDKMDTEELKMEWHSLYQIFKREKEKILKSRQCGSATVSNWSFFTEMDFLNKLNDELTIDSVTFTENILNYNNLTSHDYYSTNGSSNSKKRKTSQGLDDIQIKEESNRSISPDLVDVNHHFYENTNQSKFLEPFVTENAHIFGKMVSSNLLQYDPKYWSMLKKKIMEVFVDFEENNAGAFRQSMLGVDIPETNLYSPSEENYSDN 363
BLAST of EMLSAG00000001862 vs. Select Arthropod Genomes
Match: gb|EEC01772.1| (hypothetical protein IscW_ISCW015773 [Ixodes scapularis]) HSP 1 Score: 55.4546 bits (132), Expect = 2.040e-8 Identity = 36/111 (32.43%), Postives = 55/111 (49.55%), Query Frame = 0 Query: 120 KSLLIQFYKNNPLLWNPNHPNFTNDNVRNKLLSQFAIDLGDKMDTEELKMEWHSLYQIFKREKEKILK---SRQCGSAT------VSNWSFFTEMDFLNKLNDELTIDSVT 221 + +LI F+K N L+NP HP++ +R+K + + LG M E K ++H+L F RE K+LK C A+ S W F+ +M FLN T++ V Sbjct: 16 QKILIDFFKRNEFLYNPIHPDYKKRRLRDKKILELCNTLGCSM--LECKNKFHNLRTYFFREYNKVLKHNNGAACDGASSGDEAYTSKWDFYEDMKFLNVCYLPRTLEMVA 124
BLAST of EMLSAG00000001862 vs. Select Arthropod Genomes
Match: gb|KFM78307.1| (hypothetical protein X975_12551, partial [Stegodyphus mimosarum]) HSP 1 Score: 54.6842 bits (130), Expect = 8.996e-8 Identity = 56/225 (24.89%), Postives = 104/225 (46.22%), Query Frame = 0 Query: 123 LIQFYKNNPLLWNPNHPNFTNDNVRNKLLSQFAIDLGDKMDTEELKMEWHSLYQIFKREKEKILKSRQCGSATV----SNWSFFTEMDFL-NKLNDELTIDSVTFTENILNYNNLT----SHDYYSTNG----SSNSKKRKTSQGLDDIQIKEESNRSISPDLVDVNHHFYENTNQ--SKFLEPF-VTENAHI-FGKMVSSNL-LQYDPKYWSMLKKKIMEVFVD 329 +I FY+ + +LW+ N+ NF N +++ L+ + +G + E+K +W +L F +EK K K+ G++T S W F+T + FL + ++ T+ S+ F + ++ S + + N + +RK Q+K ++ + + + + H Y T + S L+ T N FG V S L L +DP+ + K KI ++ D Sbjct: 14 VIDFYREHVVLWDTNNTNFKNKKLKDSLILDLSTQIG--VPENEIKKKWSNLRTQFTKEKHKEKKNYTSGASTAKQYKSTWHFYTPLQFLRDAVSTRNTVTSLDFNDTTTQERSVEVARHSDEVFDINDFEEQDTEETQRKLCHTQTLPQLKRHTSNTTTSNKKQKHDHIYTATLEEISTILKSKNTTPNTFTQFGSFVGSELSLIHDPQLLTDTKYKIYQILTD 236
BLAST of EMLSAG00000001862 vs. nr
Match: gi|929346919|ref|XP_014091767.1| (PREDICTED: uncharacterized protein LOC106618502 [Bactrocera oleae]) HSP 1 Score: 65.4698 bits (158), Expect = 6.748e-8 Identity = 53/220 (24.09%), Postives = 96/220 (43.64%), Query Frame = 0 Query: 2 SYNVEEQEITKLDDEEKSRLIRFYRKHDLLWRMDNQFYRNKEKRYQTKRELVDNFNGKFSIH----TLEKCFHSLRTCQLREIKKIQ-HGVHIKRKWKFFDELSFLQE---NNGVGRNKVMLESFEKSLLIQFYKNNPLLWNPNHPNFTNDNVRNKLLSQFAIDLGDK----MDTEELKMEWHSLYQIFKREKEKILKSRQCGSATVSNWSFFTEMDFLN 209 S+ VE + +L E+ +LI YR++ LLW D+ ++ + +R R+L N F + L + H RE ++I+ G + +W F+D+ +FL E K++L + +I+ Y +P LWN NH ++R + + L D + LK ++ EKE+ S Q G+ + ++ + FL+ Sbjct: 634 SHPVETESFARLTAEQAHKLIELYRQNPLLWDPDHADFKTRVRRRNVWRQLTAQLNAHFQMRYTWVKLHRKMHDYIKYYRRERQRIELEGG--RTRWCFYDDFAFLNEVLVEQSSDAPKLLLNKQQNLKIIEVYAAHPQLWNTNHALHKRRHLRQNIFKAMSDQLRDAHNIIISPLRLKQRIVEFRCTYRLEKERRCTSEQRGATYEPCYEYYQLLSFLD 851
BLAST of EMLSAG00000001862 vs. nr
Match: gi|909571506|ref|XP_013141349.1| (PREDICTED: uncharacterized protein LOC106105528 [Papilio polytes]) HSP 1 Score: 62.7734 bits (151), Expect = 8.231e-8 Identity = 56/216 (25.93%), Postives = 98/216 (45.37%), Query Frame = 0 Query: 123 LIQFYKNNPLLWNPNHPNFTNDNVRNKLLSQFAIDLGDKMDTEELKMEWHSLYQIFKREKEKILKSRQCGSATVSNWSFFTEMDFLNKLNDELTIDSVTFTENILNYNNLTSHDYYSTNGSSNSKKRKTSQGLDDIQIKEESN--RSISPDLVDVNHHFYENTNQSKFLEPFVTENAHI--FGKMVSSNLLQYDPKYWSMLKKKIMEVFVDFEENN 334 L+ F KNNP +WNP HP +T+ +++ ++FA GDK + +K W ++ F K SR G + NW + FL K+N + S+ ++ + LT + Y N +N+ +D + E + ++I+ +LV++ F + N +PF + G+ VS L + D S KI E+ + ++E N Sbjct: 20 LVYFIKNNPNVWNPKHPKYTSVEHKDQTYAEFAALYGDKFTGQAVKNRWTNIRSTFANYLRKFKASRANGEESKINWHLWGPCQFLMKVNRTVKDSSLNLNQSEEKISELTHNQY--NNDDNNA---------EDTFVHERNTNCKAIAENLVNI---FKKMQN-----DPFGLDKTKYGEIGQTVSKRLSEMDSYDASRAVVKITEILLLYDEQN 216
BLAST of EMLSAG00000001862 vs. nr
Match: gi|910335964|ref|XP_013171482.1| (PREDICTED: uncharacterized protein LOC106120662 [Papilio xuthus]) HSP 1 Score: 61.2326 bits (147), Expect = 2.733e-7 Identity = 58/214 (27.10%), Postives = 93/214 (43.46%), Query Frame = 0 Query: 123 LIQFYKNNPLLWNPNHPNFTNDNVRNKLLSQFAIDLGDKMDTEELKMEWHSLYQIFKREKEKILKSRQCGSATVSNWSFFTEMDFLNKLNDELTIDSVTFTENILNYNNLTSHDYYSTNGSSNSKKRKTSQGLDDIQIKEESNRSISPDLVDVNHHFYENTNQSKFLEPF-VTENAHI-FGKMVSSNLLQYDPKYWSMLKKKIMEVFVDFEENN 334 L+ F KNNP +WNP HP +T+ +++ ++FA G+K + +K W ++ F K SR G NW + FL K+N T ++ LN N D + NS T D K +I+ +LV++ F + N +PF + +N H G++VS L + D KI E+ + ++E N Sbjct: 20 LVYFIKNNPNVWNPKHPKYTSVEHKDQTYAEFATLYGNKFTGQAVKNRWTNIRSTFANYLRKFKASRANGEEYKINWHLWGPCQFLMKVNR-------TIKDSSLNLNKSDEKDSSLIHNQYNSDDNTTEDTFVDTNCK-----AIAENLVNI---FKKMQN-----DPFGLDKNKHGEVGQIVSKRLSEMDSYDAGKAVVKISEILLLYDEQN 213
BLAST of EMLSAG00000001862 vs. nr
Match: gi|768412895|ref|XP_011568544.1| (PREDICTED: uncharacterized protein LOC105398190 [Plutella xylostella]) HSP 1 Score: 60.8474 bits (146), Expect = 3.953e-7 Identity = 53/232 (22.84%), Postives = 95/232 (40.95%), Query Frame = 0 Query: 123 LIQFYKNNPLLWNPNHPNFTNDNVRNKLLSQFAIDLGDKMDTEELKMEWHSLYQIFKREKEKILKSRQCGSATVSNWSFFTEMDFLNKLNDELTIDSVTFTENILNYNNLTSHDYYSTNGSSNSKKRKTSQGLDDIQIKEESNRSISPDL-VDV-NHHFYENTNQSKFLEPFVTENAHIF------------------GKMVSSNLLQYDPKYWSMLKKKIMEVFVDFEENN 334 L++F K+ P +WNP HP +T+ +++ K S+FA G++ ++ +K W ++ F K+ S G W + FL K+ +K S+ L +++ +E ++S+S D DV N+ Y TN+ F E A +F G+MV+ L Q + + + ++IMEV + + +NN Sbjct: 20 LVEFIKSKPHMWNPKHPKYTSTDMKEKTYSEFASQYGNQFTSQAVKKRWTNIRCSFACYVRKLRSSTARGKEYSVKWHLWDACQFLLKV----------------------------------TKNPPPSEDLSELEDVKEDSQSLSGDEDYDVDNNAQYSYTNEQSSCNGFAQELAKVFRGVQNDAFGLDNTKHGKIGRMVTKQLSQMNSYDAARVSQQIMEVLLKYNDNN 217
BLAST of EMLSAG00000001862 vs. nr
Match: gi|939265434|ref|XP_014252763.1| (PREDICTED: uncharacterized protein LOC106668474 [Cimex lectularius]) HSP 1 Score: 59.6918 bits (143), Expect = 6.366e-7 Identity = 52/189 (27.51%), Postives = 85/189 (44.97%), Query Frame = 0 Query: 58 GKFSIHTLEKCFHSLRTCQLREIKKIQHGVHIKRKWKFFDELSFLQENNGVGRNKV------------MLESFEKSL-LIQFYKNNPLLWNPNHPNFTNDNVRNKLLSQFAIDLGDKMDTEELKMEWHSLYQIFKREKEKILKSRQCGSAT----VSNWSFFTEMDFLN-------KLNDELTIDSVTF 222 G+F + TL + H + +I GV FL E+ G +++ M+ S E+SL LI Y+ P +WNP +P++ N++N S+ A+ LG + EE K + SL +RE+ K+ KS+ G+ S W + + FL +LN E+T S++F Sbjct: 3 GEFFVWTLLRALH---VTLAQPFDRIHRGV------------GFLCEHKGARSSRLDGVRDSCAVWTFMMWSDEQSLELIGLYQGKPEIWNPKNPDYFKKNLKNDAWSEIALSLGR--EVEECKNKIISLLASHRRERGKVKKSQGTGTGVDETYKSTWFAYEALAFLGDRNNPRKRLNTEVTAYSLSF 174 The following BLAST results are available for this feature:
BLAST of EMLSAG00000001862 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO) Total hits: 1
BLAST of EMLSAG00000001862 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA) Total hits: 2
BLAST of EMLSAG00000001862 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self) Total hits: 1
BLAST of EMLSAG00000001862 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt) Total hits: 0
BLAST of EMLSAG00000001862 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods) Total hits: 2
BLAST of EMLSAG00000001862 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017)) Total hits: 5
BLAST of EMLSAG00000001862 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins) Total hits: 0
Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Cross References
External references for this gene
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at LSalAtl2s1320:32251..33342- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>EMLSAG00000001862-684628 ID=EMLSAG00000001862-684628|Name=EMLSAG00000001862|organism=Lepeophtheirus salmonis|type=gene|length=1092bp|location=Sequence derived from alignment at LSalAtl2s1320:32251..33342- (Lepeophtheirus salmonis)back to top Add to Basket
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