EMLSAG00000001867, EMLSAG00000001867-684633 (gene) Lepeophtheirus salmonis

Overview


Name	EMLSAG00000001867
Unique Name	EMLSAG00000001867-684633
Type	gene
Organism	Lepeophtheirus salmonis (salmon louse)

Associated RNAi Experiments

Nothing found

Homology

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BLAST of EMLSAG00000001867 vs. GO
Match: - (symbol:Chrac1 "chromatin accessibility complex 1" species:10090 "Mus musculus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003887 "DNA-directed DNA polymerase activity" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI] [GO:0005575 "cellular_component" evidence=ND] [GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=IEA] [GO:0008150 "biological_process" evidence=ND] [GO:0008623 "CHRAC" evidence=IEA] [GO:0016740 "transferase activity" evidence=IEA] [GO:0016779 "nucleotidyltransferase activity" evidence=IEA] [GO:0043565 "sequence-specific DNA binding" evidence=IEA] [GO:0046982 "protein heterodimerization activity" evidence=IEA] InterPro:IPR003958 InterPro:IPR009072 InterPro:IPR028405 Pfam:PF00808 MGI:MGI:2135796 GO:GO:0043565 GO:GO:0006261 GO:GO:0006338 Gene3D:1.10.20.10 SUPFAM:SSF47113 UniGene:Mm.23095 GO:GO:0008623 CTD:54108 HOGENOM:HOG000068045 HOVERGEN:HBG050946 KO:K11656 OMA:KDKCGEQ OrthoDB:EOG7RJPTD TreeFam:TF350392 GO:GO:0003887 PANTHER:PTHR10252:SF7 EMBL:AF230805 EMBL:AK010812 EMBL:BC016593 EMBL:BC061043 RefSeq:NP_444298.1 ProteinModelPortal:Q9JKP8 SMR:Q9JKP8 BioGrid:220245 IntAct:Q9JKP8 MINT:MINT-8178504 PhosphoSite:Q9JKP8 PaxDb:Q9JKP8 PRIDE:Q9JKP8 Ensembl:ENSMUST00000089765 GeneID:93696 KEGG:mmu:93696 UCSC:uc007wbq.1 eggNOG:NOG259822 GeneTree:ENSGT00510000048543 InParanoid:Q9JKP8 NextBio:351453 PRO:PR:Q9JKP8 ArrayExpress:Q9JKP8 Bgee:Q9JKP8 CleanEx:MM_CHRAC1 Genevestigator:Q9JKP8 Uniprot:Q9JKP8)

HSP 1 Score: 62.003 bits (149), Expect = 4.831e-12
Identity = 36/95 (37.89%), Postives = 54/95 (56.84%), Query Frame = 0

Query:    6 DVKNTNLPLTRVRRIMKSSPD----------------EKFISFLANDSLCNGRNKSQ--IEYEDLVNTVQNQRSLEFLRFILPKKMKFSEYLDML 82
            D +  +LPL+R+R IMKSSP+                E F+ +LA  S  +G  K++  + Y DL +T ++  +L+FL  ILPKK+  S+YL ML
Sbjct:   13 DQRLVSLPLSRIRVIMKSSPEVSSINQEALVLTAKATELFVQYLATCSYRHGSGKAKKALTYSDLASTAEDSETLQFLADILPKKILASKYLKML 107

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BLAST of EMLSAG00000001867 vs. GO
Match: - (symbol:CHRAC1 "Uncharacterized protein" species:9031 "Gallus gallus" [GO:0005622 "intracellular" evidence=IEA] [GO:0043565 "sequence-specific DNA binding" evidence=IEA] [GO:0046982 "protein heterodimerization activity" evidence=IEA] InterPro:IPR003958 InterPro:IPR009072 InterPro:IPR028405 Pfam:PF00808 GO:GO:0043565 GO:GO:0006338 Gene3D:1.10.20.10 SUPFAM:SSF47113 GO:GO:0008623 PANTHER:PTHR10252:SF7 GeneTree:ENSGT00510000048543 EMBL:AADN03001908 Ensembl:ENSGALT00000044029 Uniprot:R4GM30)

HSP 1 Score: 59.6918 bits (143), Expect = 3.359e-11
Identity = 36/94 (38.30%), Postives = 53/94 (56.38%), Query Frame = 0

Query:   10 TNLPLTRVRRIMKSSPD----------------EKFISFLANDSLCNGRNKSQ--IEYEDLVNTVQNQRSLEFLRFILPKKMKFSEYLDMLGRE 85
             +LPL+R+R IMKSSP+                E F+ +LA+ S  +GR K +  + Y DL +T +   + +FL  ILPKK+  S+YL ML +E
Sbjct:   12 VSLPLSRIRVIMKSSPEVSSINQDALFLTAKATELFVQYLASYSYKHGRGKEKNALTYSDLSHTAEECETFQFLADILPKKILASKYLKMLEKE 105

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BLAST of EMLSAG00000001867 vs. GO
Match: - (symbol:Chrac1 "chromatin accessibility complex 1" species:10116 "Rattus norvegicus" [GO:0005622 "intracellular" evidence=IEA] [GO:0043565 "sequence-specific DNA binding" evidence=IEA] [GO:0046982 "protein heterodimerization activity" evidence=IEA] InterPro:IPR003958 InterPro:IPR009072 InterPro:IPR028405 Pfam:PF00808 RGD:1309321 GO:GO:0043565 GO:GO:0006338 Gene3D:1.10.20.10 SUPFAM:SSF47113 GO:GO:0008623 EMBL:CH473950 CTD:54108 KO:K11656 OMA:KDKCGEQ OrthoDB:EOG7RJPTD TreeFam:TF350392 PANTHER:PTHR10252:SF7 GeneTree:ENSGT00510000048543 EMBL:AABR06051803 RefSeq:NP_001128352.1 UniGene:Rn.17653 Ensembl:ENSRNOT00000012121 GeneID:315058 KEGG:rno:315058 UCSC:RGD:1309321 NextBio:668566 PRO:PR:D3ZAR9 Uniprot:D3ZAR9)

HSP 1 Score: 59.6918 bits (143), Expect = 4.216e-11
Identity = 34/91 (37.36%), Postives = 51/91 (56.04%), Query Frame = 0

Query:   10 TNLPLTRVRRIMKSSPD----------------EKFISFLANDSLCNGRNKSQ--IEYEDLVNTVQNQRSLEFLRFILPKKMKFSEYLDML 82
             +LPL+R+R IMKSSP+                E F+ +LA  S  +G  K++  + Y DL +  ++  +L+FL  ILPKK+  S+YL ML
Sbjct:   17 VSLPLSRIRVIMKSSPEVSSINQEALVLTAKATELFVQYLATCSYRHGSGKAKKALTYSDLASAAEDSETLQFLADILPKKILASKYLKML 107

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BLAST of EMLSAG00000001867 vs. GO
Match: - (symbol:CHRAC1 "Chromatin accessibility complex 1" species:9913 "Bos taurus" [GO:0005622 "intracellular" evidence=IEA] [GO:0043565 "sequence-specific DNA binding" evidence=IEA] [GO:0046982 "protein heterodimerization activity" evidence=IEA] InterPro:IPR003958 InterPro:IPR009072 InterPro:IPR028405 Pfam:PF00808 GO:GO:0043565 GO:GO:0006338 Gene3D:1.10.20.10 SUPFAM:SSF47113 GO:GO:0008623 CTD:54108 HOGENOM:HOG000068045 HOVERGEN:HBG050946 KO:K11656 OMA:KDKCGEQ OrthoDB:EOG7RJPTD TreeFam:TF350392 PANTHER:PTHR10252:SF7 eggNOG:NOG259822 GeneTree:ENSGT00510000048543 EMBL:DAAA02037530 EMBL:BC120142 RefSeq:NP_001068946.1 UniGene:Bt.5830 STRING:9913.ENSBTAP00000026936 Ensembl:ENSBTAT00000026936 GeneID:510942 KEGG:bta:510942 InParanoid:Q0P5E8 NextBio:20869693 Uniprot:Q0P5E8)

HSP 1 Score: 59.3066 bits (142), Expect = 5.000e-11
Identity = 35/90 (38.89%), Postives = 49/90 (54.44%), Query Frame = 0

Query:   11 NLPLTRVRRIMKSSPD----------------EKFISFLANDSL--CNGRNKSQIEYEDLVNTVQNQRSLEFLRFILPKKMKFSEYLDML 82
            +LPL+R+R IMKSSP+                E F+ +LA  S    +G+ K  + Y DL NT +   + +FL  ILPKK+  S+YL ML
Sbjct:   18 SLPLSRIRVIMKSSPEVSSINQEALVLTAKATELFVQYLATYSYRHGSGKEKKALTYSDLSNTAEESETFQFLADILPKKILASKYLKML 107

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BLAST of EMLSAG00000001867 vs. GO
Match: - (symbol:CHRAC1 "Chromatin accessibility complex protein 1" species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=NAS] [GO:0003887 "DNA-directed DNA polymerase activity" evidence=NAS] [GO:0006261 "DNA-dependent DNA replication" evidence=NAS] [GO:0006338 "chromatin remodeling" evidence=NAS] [GO:0008622 "epsilon DNA polymerase complex" evidence=NAS] [GO:0008623 "CHRAC" evidence=NAS] [GO:0043565 "sequence-specific DNA binding" evidence=IEA] [GO:0046982 "protein heterodimerization activity" evidence=IEA] InterPro:IPR003958 InterPro:IPR009072 InterPro:IPR028405 Pfam:PF00808 GO:GO:0003677 GO:GO:0043565 GO:GO:0006338 Gene3D:1.10.20.10 SUPFAM:SSF47113 GO:GO:0008623 EMBL:AF226076 EMBL:AK023537 EMBL:BC015891 RefSeq:NP_059140.1 UniGene:Hs.279704 ProteinModelPortal:Q9NRG0 SMR:Q9NRG0 BioGrid:119904 IntAct:Q9NRG0 STRING:9606.ENSP00000220913 PhosphoSite:Q9NRG0 DMDM:22653683 PaxDb:Q9NRG0 PRIDE:Q9NRG0 DNASU:54108 Ensembl:ENST00000220913 GeneID:54108 KEGG:hsa:54108 UCSC:uc003yvl.3 CTD:54108 GeneCards:GC08P141521 HGNC:HGNC:13544 HPA:HPA059008 MIM:607268 neXtProt:NX_Q9NRG0 PharmGKB:PA26481 eggNOG:COG5208 HOGENOM:HOG000068045 HOVERGEN:HBG050946 InParanoid:Q9NRG0 KO:K11656 OMA:KDKCGEQ OrthoDB:EOG7RJPTD PhylomeDB:Q9NRG0 TreeFam:TF350392 ChiTaRS:CHRAC1 GenomeRNAi:54108 NextBio:56474 PRO:PR:Q9NRG0 ArrayExpress:Q9NRG0 Bgee:Q9NRG0 CleanEx:HS_CHRAC1 Genevestigator:Q9NRG0 GO:GO:0008622 GO:GO:0003887 PANTHER:PTHR10252:SF7 Uniprot:Q9NRG0)

HSP 1 Score: 59.3066 bits (142), Expect = 5.923e-11
Identity = 36/90 (40.00%), Postives = 48/90 (53.33%), Query Frame = 0

Query:   11 NLPLTRVRRIMKSSPD----------------EKFISFLANDSL--CNGRNKSQIEYEDLVNTVQNQRSLEFLRFILPKKMKFSEYLDML 82
            +LPL+R+R IMKSSP+                E F+  LA  S    +G+ K  + Y DL NT Q   + +FL  ILPKK+  S+YL ML
Sbjct:   18 SLPLSRIRVIMKSSPEVSSINQEALVLTAKATELFVQCLATYSYRHGSGKEKKVLTYSDLANTAQQSETFQFLADILPKKILASKYLKML 107

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BLAST of EMLSAG00000001867 vs. GO
Match: - (symbol:chrac1 "chromatin accessibility complex 1" species:7955 "Danio rerio" [GO:0005622 "intracellular" evidence=IEA] [GO:0043565 "sequence-specific DNA binding" evidence=IEA] [GO:0046982 "protein heterodimerization activity" evidence=IEA] [GO:0008150 "biological_process" evidence=ND] InterPro:IPR003958 InterPro:IPR009072 InterPro:IPR028405 Pfam:PF00808 ZFIN:ZDB-GENE-050227-18 GO:GO:0043565 GO:GO:0006338 Gene3D:1.10.20.10 SUPFAM:SSF47113 GO:GO:0008623 CTD:54108 eggNOG:COG5208 HOGENOM:HOG000068045 HOVERGEN:HBG050946 KO:K11656 OMA:KDKCGEQ OrthoDB:EOG7RJPTD TreeFam:TF350392 PANTHER:PTHR10252:SF7 GeneTree:ENSGT00510000048543 EMBL:CU896645 EMBL:BC090283 EMBL:BC164918 RefSeq:NP_001013311.1 UniGene:Dr.76531 STRING:7955.ENSDARP00000062079 Ensembl:ENSDART00000062080 GeneID:503606 KEGG:dre:503606 InParanoid:Q5EAR4 NextBio:20866240 PRO:PR:Q5EAR4 Uniprot:Q5EAR4)

HSP 1 Score: 54.299 bits (129), Expect = 2.387e-9
Identity = 34/93 (36.56%), Postives = 49/93 (52.69%), Query Frame = 0

Query:    8 KNTNLPLTRVRRIMKSSPD----------------EKFISFLANDSLCNG--RNKSQIEYEDLVNTVQNQRSLEFLRFILPKKMKFSEYLDML 82
            +  +LP++RVR IMKSSPD                E F+  LA  S  NG  ++ + + Y DL +TV+   + +FL  ILPKK+   +YL  L
Sbjct:   12 RTISLPISRVRLIMKSSPDVSCINQDALFLTTKATELFVQHLALSSYENGPSKDTNTLSYSDLADTVEETETFQFLTDILPKKILARDYLKTL 104

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BLAST of EMLSAG00000001867 vs. GO
Match: - (symbol:CHRAC1 "Uncharacterized protein" species:9823 "Sus scrofa" [GO:0046982 "protein heterodimerization activity" evidence=IEA] InterPro:IPR009072 InterPro:IPR028405 GO:GO:0003677 GO:GO:0006338 Gene3D:1.10.20.10 SUPFAM:SSF47113 GO:GO:0008623 OrthoDB:EOG7RJPTD TreeFam:TF350392 PANTHER:PTHR10252:SF7 GeneTree:ENSGT00510000048543 EMBL:CU571011 Ensembl:ENSSSCT00000006513 Uniprot:F1RSJ4)

HSP 1 Score: 49.6766 bits (117), Expect = 1.345e-7
Identity = 26/60 (43.33%), Postives = 35/60 (58.33%), Query Frame = 0

Query:   25 PDEKFISFLANDSL--CNGRNKSQIEYEDLVNTVQNQRSLEFLRFILPKKMKFSEYLDML 82
            P E F+ +LA  S    +GR K  + Y DL NT +   + +FL  ILPKK+  S+YL ML
Sbjct:   57 PQELFVQYLATYSYRHGSGREKKALTYSDLSNTAEESETFQFLADILPKKILASKYLKML 116

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BLAST of EMLSAG00000001867 vs. GO
Match: - (symbol:CHRAC1 "Chromatin accessibility complex protein 1" species:9606 "Homo sapiens" [GO:0046982 "protein heterodimerization activity" evidence=IEA] InterPro:IPR009072 InterPro:IPR028405 GO:GO:0003677 GO:GO:0006338 Gene3D:1.10.20.10 SUPFAM:SSF47113 EMBL:AC107375 GO:GO:0008623 HGNC:HGNC:13544 ChiTaRS:CHRAC1 PANTHER:PTHR10252:SF7 ProteinModelPortal:H0YBP8 Ensembl:ENST00000519618 NextBio:35521477 Uniprot:H0YBP8)

HSP 1 Score: 44.669 bits (104), Expect = 5.541e-6
Identity = 25/58 (43.10%), Postives = 33/58 (56.90%), Query Frame = 0

Query:   27 EKFISFLANDSL--CNGRNKSQIEYEDLVNTVQNQRSLEFLRFILPKKMKFSEYLDML 82
            E F+  LA  S    +G+ K  + Y DL NT Q   + +FL  ILPKK+  S+YL ML
Sbjct:   16 ELFVQCLATYSYRHGSGKEKKVLTYSDLANTAQQSETFQFLADILPKKILASKYLKML 73

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BLAST of EMLSAG00000001867 vs. GO
Match: - (symbol:Chrac-16 "Chromatin accessibility complex 16kD protein" species:7227 "Drosophila melanogaster" [GO:0008623 "CHRAC" evidence=IDA;NAS] [GO:0046982 "protein heterodimerization activity" evidence=IPI] [GO:0006338 "chromatin remodeling" evidence=IEA] [GO:0043565 "sequence-specific DNA binding" evidence=IEA] [GO:0006974 "cellular response to DNA damage stimulus" evidence=IMP] InterPro:IPR003958 InterPro:IPR009072 InterPro:IPR028405 Pfam:PF00808 EMBL:AE014298 GO:GO:0043565 GO:GO:0006974 GO:GO:0006338 Gene3D:1.10.20.10 SUPFAM:SSF47113 GO:GO:0008623 KO:K11656 OrthoDB:EOG7RJPTD PANTHER:PTHR10252:SF7 eggNOG:NOG259822 GeneTree:ENSGT00510000048543 PDB:2BYK PDB:2BYM PDBsum:2BYK PDBsum:2BYM EMBL:AY113515 EMBL:AJ271142 RefSeq:NP_572776.1 UniGene:Dm.20583 DIP:DIP-20460N MINT:MINT-1579286 STRING:7227.FBpp0073475 EnsemblMetazoa:FBtr0073642 GeneID:32166 KEGG:dme:Dmel_CG15736 UCSC:CG15736-RA CTD:32166 FlyBase:FBgn0043001 InParanoid:Q9V452 OMA:TIMKSSM EvolutionaryTrace:Q9V452 GenomeRNAi:32166 NextBio:777217 PRO:PR:Q9V452 Uniprot:Q9V452)

HSP 1 Score: 44.669 bits (104), Expect = 7.303e-6
Identity = 31/92 (33.70%), Postives = 45/92 (48.91%), Query Frame = 0

Query:   10 TNLPLTRVRRIMKSSPD----------------EKFISFLANDSLC---NGRNKSQIEYEDLVNTVQNQRSLEFLRFILPKKMKFSEYLDML 82
            T LPL+RVR IMKSS D                E F+  LA  +       R    ++YE L   V   ++LEFL  I+P+K++  ++ +ML
Sbjct:   18 TFLPLSRVRTIMKSSMDTGLITNEVLFLMTKCTELFVRHLAGAAYTEEFGQRPGEALKYEHLSQVVNKNKNLEFLLQIVPQKIRVHQFQEML 109

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BLAST of EMLSAG00000001867 vs. GO
Match: - (symbol:CHRAC1 "Uncharacterized protein" species:9615 "Canis lupus familiaris" [GO:0046982 "protein heterodimerization activity" evidence=IEA] InterPro:IPR009072 InterPro:IPR028405 GO:GO:0003677 GO:GO:0006338 Gene3D:1.10.20.10 SUPFAM:SSF47113 GO:GO:0008623 OrthoDB:EOG7RJPTD PANTHER:PTHR10252:SF7 GeneTree:ENSGT00510000048543 EMBL:AAEX03008878 Ensembl:ENSCAFT00000049276 OMA:ASEYLKM Uniprot:J9NY82)

HSP 1 Score: 43.8986 bits (102), Expect = 8.577e-6
Identity = 24/58 (41.38%), Postives = 34/58 (58.62%), Query Frame = 0

Query:   27 EKFISFLANDSLCNGRNKSQ--IEYEDLVNTVQNQRSLEFLRFILPKKMKFSEYLDML 82
            E F+ +LA  S  +G  K +  + Y DL NT +   + +FL  ILPKK+  S+YL ML
Sbjct:    1 ELFVQYLATYSYRHGSGKERKALTYSDLSNTAEESETFQFLADILPKKILASKYLKML 58

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BLAST of EMLSAG00000001867 vs. C. finmarchicus
Match: gi|592938313|gb|GAXK01020240.1| (TSA: Calanus finmarchicus comp13148_c2_seq1 transcribed RNA sequence)

HSP 1 Score: 65.0846 bits (157), Expect = 2.985e-12
Identity = 41/103 (39.81%), Postives = 57/103 (55.34%), Query Frame = 0

Query:    8 KNTNLPLTRVRRIMKSSPD----------------EKFISFLANDSLCNGRNKSQIEYEDLVNTVQNQRSLEFLRFILPKKMKFSEYLDMLGREGSPEKVEEF 94
            K+  LPL RV+ IMKSSPD                E FI +L   S  +G N  ++EY DL   VQ + S+EFL  I+PKK+++ E+L M+  EG  E+ + F
Sbjct:  121 KDVLLPLARVKTIMKSSPDVENIGQESLFLITKATELFIMYLTKLSQRHG-NDQEVEYSDLAAVVQRKDSMEFLHDIVPKKIQYQEFLKMV-EEGKDEEADLF 423

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BLAST of EMLSAG00000001867 vs. C. finmarchicus
Match: gi|592845605|gb|GAXK01111939.1| (TSA: Calanus finmarchicus comp52319_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 30.4166 bits (67), Expect = 5.327e-1
Identity = 13/26 (50.00%), Postives = 18/26 (69.23%), Query Frame = 0

Query:    6 DVKNTNLPLTRVRRIMKSSPDEKFIS 31
            D+K+  LPL R+++IMK   D K IS
Sbjct:  145 DLKHQELPLARIKKIMKLDEDVKMIS 222

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BLAST of EMLSAG00000001867 vs. C. finmarchicus
Match: gi|592790368|gb|GAXK01164200.1| (TSA: Calanus finmarchicus comp574432_c1_seq1 transcribed RNA sequence)

HSP 1 Score: 30.0314 bits (66), Expect = 8.581e-1
Identity = 19/50 (38.00%), Postives = 26/50 (52.00%), Query Frame = 0

Query:   29 FISFLANDSLCNGRNKSQIEYEDLVNTVQNQR--SLEFLRFILPKKMKFS 76
            F+SFL   SLC  +N S+  + +LV    N+   SL FL      K+K S
Sbjct:  199 FVSFLKYFSLCFIKNISRTTFAELVYLFYNRSFLSLTFLSHYFTAKLKIS 348

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BLAST of EMLSAG00000001867 vs. C. finmarchicus
Match: gi|592767904|gb|GAXK01186664.1| (TSA: Calanus finmarchicus comp44192_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 30.0314 bits (66), Expect = 9.102e-1
Identity = 13/26 (50.00%), Postives = 18/26 (69.23%), Query Frame = 0

Query:    6 DVKNTNLPLTRVRRIMKSSPDEKFIS 31
            D+K+  LPL R+++IMK   D K IS
Sbjct:  326 DLKHQELPLARIKKIMKLDEDVKMIS 403

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BLAST of EMLSAG00000001867 vs. C. finmarchicus
Match: gi|592767903|gb|GAXK01186665.1| (TSA: Calanus finmarchicus comp44192_c0_seq2 transcribed RNA sequence)

HSP 1 Score: 29.6462 bits (65), Expect = 1.260e+0
Identity = 14/29 (48.28%), Postives = 19/29 (65.52%), Query Frame = 0

Query:    6 DVKNTNLPLTRVRRIMKSSPDEKFISFLA 34
            D+K+  LPL R+++IMK   D K IS  A
Sbjct:  123 DLKHQELPLARIKKIMKLDEDVKMISAEA 209

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BLAST of EMLSAG00000001867 vs. C. finmarchicus
Match: gi|592885787|gb|GAXK01072588.1| (TSA: Calanus finmarchicus comp1687669_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 29.261 bits (64), Expect = 1.880e+0
Identity = 16/51 (31.37%), Postives = 25/51 (49.02%), Query Frame = 0

Query:   29 FISFLANDSLCN-------GRNKSQIEYEDLVNTVQNQRSLEFLRFILPKK 72
              SF+  +S+CN       GR+   + ++DL  +V  QRS +      PKK
Sbjct:  826 HFSFIGENSICNRKQSMIHGRSDEDLSFQDLQKSVPGQRSRKQSPSPTPKK 978

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BLAST of EMLSAG00000001867 vs. C. finmarchicus
Match: gi|592777021|gb|GAXK01177547.1| (TSA: Calanus finmarchicus comp278718_c0_seq6 transcribed RNA sequence)

HSP 1 Score: 28.8758 bits (63), Expect = 2.252e+0
Identity = 18/35 (51.43%), Postives = 18/35 (51.43%), Query Frame = 0

Query:   12 LPLTRVRRIMKSSPDEKFISFLANDSLCNGRNKSQ 46
            LPL RV    KSS    FI F  N SLC   NK Q
Sbjct: 1155 LPLLRVLTSFKSSACSSFICF--NISLCESVNKRQ 1253

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BLAST of EMLSAG00000001867 vs. C. finmarchicus
Match: gi|592777022|gb|GAXK01177546.1| (TSA: Calanus finmarchicus comp278718_c0_seq5 transcribed RNA sequence)

HSP 1 Score: 28.8758 bits (63), Expect = 2.253e+0
Identity = 18/35 (51.43%), Postives = 18/35 (51.43%), Query Frame = 0

Query:   12 LPLTRVRRIMKSSPDEKFISFLANDSLCNGRNKSQ 46
            LPL RV    KSS    FI F  N SLC   NK Q
Sbjct: 1170 LPLLRVLTSFKSSACSSFICF--NISLCESVNKRQ 1268

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BLAST of EMLSAG00000001867 vs. C. finmarchicus
Match: gi|592777023|gb|GAXK01177545.1| (TSA: Calanus finmarchicus comp278718_c0_seq4 transcribed RNA sequence)

HSP 1 Score: 28.8758 bits (63), Expect = 2.303e+0
Identity = 18/35 (51.43%), Postives = 18/35 (51.43%), Query Frame = 0

Query:   12 LPLTRVRRIMKSSPDEKFISFLANDSLCNGRNKSQ 46
            LPL RV    KSS    FI F  N SLC   NK Q
Sbjct: 1155 LPLLRVLTSFKSSACSSFICF--NISLCESVNKRQ 1253

[Close]

BLAST of EMLSAG00000001867 vs. C. finmarchicus
Match: gi|592777024|gb|GAXK01177544.1| (TSA: Calanus finmarchicus comp278718_c0_seq3 transcribed RNA sequence)

HSP 1 Score: 28.8758 bits (63), Expect = 2.304e+0
Identity = 18/35 (51.43%), Postives = 18/35 (51.43%), Query Frame = 0

Query:   12 LPLTRVRRIMKSSPDEKFISFLANDSLCNGRNKSQ 46
            LPL RV    KSS    FI F  N SLC   NK Q
Sbjct: 1170 LPLLRVLTSFKSSACSSFICF--NISLCESVNKRQ 1268

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BLAST of EMLSAG00000001867 vs. L. salmonis peptides
Match: EMLSAP00000001867 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1321:108432:109109:1 gene:EMLSAG00000001867 transcript:EMLSAT00000001867 description:"maker-LSalAtl2s1321-augustus-gene-0.16")

HSP 1 Score: 193.356 bits (490), Expect = 6.483e-65
Identity = 95/95 (100.00%), Postives = 95/95 (100.00%), Query Frame = 0

Query:    1 MTRNLDVKNTNLPLTRVRRIMKSSPDEKFISFLANDSLCNGRNKSQIEYEDLVNTVQNQRSLEFLRFILPKKMKFSEYLDMLGREGSPEKVEEFI 95
            MTRNLDVKNTNLPLTRVRRIMKSSPDEKFISFLANDSLCNGRNKSQIEYEDLVNTVQNQRSLEFLRFILPKKMKFSEYLDMLGREGSPEKVEEFI
Sbjct:    1 MTRNLDVKNTNLPLTRVRRIMKSSPDEKFISFLANDSLCNGRNKSQIEYEDLVNTVQNQRSLEFLRFILPKKMKFSEYLDMLGREGSPEKVEEFI 95

[Close]

BLAST of EMLSAG00000001867 vs. L. salmonis peptides
Match: EMLSAP00000007292 (pep:novel supercontig:LSalAtl2s:LSalAtl2s409:3878:5868:-1 gene:EMLSAG00000007292 transcript:EMLSAT00000007292 description:"maker-LSalAtl2s409-augustus-gene-0.5")

HSP 1 Score: 73.9442 bits (180), Expect = 4.585e-18
Identity = 39/94 (41.49%), Postives = 58/94 (61.70%), Query Frame = 0

Query:    8 KNTNLPLTRVRRIMKSSPD----------------EKFISFLANDSLCNGRNKSQIEYEDLVNTVQNQRSLEFLRFILPKKMKFSEYLDMLGRE 85
            K+ +LP++RVR IMKSSPD                E FI +L   S  NG N   ++Y+DL   V+ + +LEFL+ I+PKK+K+SEYL+++ +E
Sbjct:   16 KDVSLPMSRVRTIMKSSPDIDNISQESLYLITKATEYFIIYLTKLSQKNGGNLGNVDYDDLSEVVERKNALEFLQDIIPKKIKYSEYLELMKKE 109

[Close]

BLAST of EMLSAG00000001867 vs. SwissProt
Match: gi|22653682|sp|Q9JKP8.1|CHRC1_MOUSE (RecName: Full=Chromatin accessibility complex protein 1; Short=CHRAC-1; AltName: Full=DNA polymerase epsilon subunit p15; AltName: Full=NF-YC-like protein; AltName: Full=YC-like protein 1; Short=YCL1)

HSP 1 Score: 62.003 bits (149), Expect = 9.973e-13
Identity = 36/95 (37.89%), Postives = 54/95 (56.84%), Query Frame = 0

Query:    6 DVKNTNLPLTRVRRIMKSSPD----------------EKFISFLANDSLCNGRNKSQ--IEYEDLVNTVQNQRSLEFLRFILPKKMKFSEYLDML 82
            D +  +LPL+R+R IMKSSP+                E F+ +LA  S  +G  K++  + Y DL +T ++  +L+FL  ILPKK+  S+YL ML
Sbjct:   13 DQRLVSLPLSRIRVIMKSSPEVSSINQEALVLTAKATELFVQYLATCSYRHGSGKAKKALTYSDLASTAEDSETLQFLADILPKKILASKYLKML 107

[Close]

BLAST of EMLSAG00000001867 vs. SwissProt
Match: gi|22653683|sp|Q9NRG0.1|CHRC1_HUMAN (RecName: Full=Chromatin accessibility complex protein 1; Short=CHRAC-1; AltName: Full=Chromatin accessibility complex 15 kDa protein; Short=CHRAC-15; Short=HuCHRAC15; AltName: Full=DNA polymerase epsilon subunit p15)

HSP 1 Score: 59.3066 bits (142), Expect = 1.500e-11
Identity = 36/90 (40.00%), Postives = 48/90 (53.33%), Query Frame = 0

Query:   11 NLPLTRVRRIMKSSPD----------------EKFISFLANDSL--CNGRNKSQIEYEDLVNTVQNQRSLEFLRFILPKKMKFSEYLDML 82
            +LPL+R+R IMKSSP+                E F+  LA  S    +G+ K  + Y DL NT Q   + +FL  ILPKK+  S+YL ML
Sbjct:   18 SLPLSRIRVIMKSSPEVSSINQEALVLTAKATELFVQCLATYSYRHGSGKEKKVLTYSDLANTAQQSETFQFLADILPKKILASKYLKML 107

[Close]

BLAST of EMLSAG00000001867 vs. Select Arthropod Genomes
Match: EAA04577.4 (AGAP007481-PA [Anopheles gambiae str. PEST])

HSP 1 Score: 58.9214 bits (141), Expect = 2.480e-11
Identity = 33/91 (36.26%), Postives = 48/91 (52.75%), Query Frame = 0

Query:   10 TNLPLTRVRRIMKSSPD----------------EKFISFLANDSLCNGRNKSQIEYEDLVNTVQNQRSLEFLRFILPKKMKFSEYLDMLGR 84
            T LP++R+R +MK+SPD                E FI ++A  +   G  K  +EY+DL   V+   +LEFL  ILPKK+   EY  M+ +
Sbjct:    7 TQLPMSRIRTVMKTSPDMGNINPEALFLMCRSAEMFIEYMAKGAHRQG--KKSLEYKDLAKCVEEDDNLEFLSQILPKKITVKEYKTMMAK 95

[Close]

BLAST of EMLSAG00000001867 vs. Select Arthropod Genomes
Match: gb|KFM64750.1| (Chromatin accessibility complex protein 1, partial [Stegodyphus mimosarum])

HSP 1 Score: 56.9954 bits (136), Expect = 3.258e-11
Identity = 34/96 (35.42%), Postives = 49/96 (51.04%), Query Frame = 0

Query:   12 LPLTRVRRIMKSSPD----------------EKFISFLANDSLCNGRNKSQIEYEDLVNTVQNQRSLEFLRFILPKKMKFSEYLDMLGREGSPEKV 91
            LPL+R++ IMKSSPD                E F++FL   +L    NK  ++Y DL   V    +LEFLR I+P  +K  +YL++  +    EK 
Sbjct:   11 LPLSRIKMIMKSSPDVSNISPDSIFLIAKAAEGFVAFLVRQALKASDNKMLVDYSDLSKVVYEIDNLEFLRDIIPPTIKAYKYLEIFKKVEEHEKA 106

[Close]

BLAST of EMLSAG00000001867 vs. Select Arthropod Genomes
Match: EFX70446.1 (hypothetical protein DAPPUDRAFT_309445 [Daphnia pulex])

HSP 1 Score: 51.6026 bits (122), Expect = 4.278e-9
Identity = 29/91 (31.87%), Postives = 48/91 (52.75%), Query Frame = 0

Query:   12 LPLTRVRRIMKSSPD----------------EKFISFLANDSLCNGRNKSQIEYEDLVNTVQNQRSLEFLRFILPKKMKFSEYLDMLGREG 86
            LP  RV+ IMKSSPD                E F+  LA +   +    +++ Y+ L + VQ   S++FL+ ++PKK+ + EY ++L  +G
Sbjct:   15 LPQARVKMIMKSSPDTESISTDALYFVTKATEFFVEHLAQEIYESTNKSNELTYKGLADIVQKSDSMQFLKDMVPKKITYKEYQEILKEKG 105

[Close]

BLAST of EMLSAG00000001867 vs. Select Arthropod Genomes
Match: EEB17148.1 (Chromatin accessibility complex protein, putative [Pediculus humanus corporis])

HSP 1 Score: 50.8322 bits (120), Expect = 4.417e-9
Identity = 29/77 (37.66%), Postives = 46/77 (59.74%), Query Frame = 0

Query:    8 KNTNLPLTRVRRIMKSSPDEKFIS-----------FLANDSLCNGRNKSQIEYEDLVNTVQNQRSLEFLRFILPKKM 73
            K  NLP++RV+ IMKSSP  + IS           +LA +SL  G+N ++++YE + + V N+   EFL+ +L  K+
Sbjct:    7 KYLNLPVSRVKVIMKSSPQVENISNESIYLVAKATYLAQESLMYGQNVNELKYESIAHIVNNESKFEFLKGLLQFKV 83

[Close]

BLAST of EMLSAG00000001867 vs. Select Arthropod Genomes
Match: XP_001122344.1 (PREDICTED: chromatin accessibility complex protein 1 [Apis mellifera])

HSP 1 Score: 50.0618 bits (118), Expect = 4.071e-8
Identity = 28/93 (30.11%), Postives = 47/93 (50.54%), Query Frame = 0

Query:    7 VKNTNLPLTRVRRIMKSSP----------------DEKFISFLANDSLCNGRNKSQIEYEDLVNTVQNQRSLEFLRFILPKKMKFSEYLDMLG 83
            +K   LP++RV+ IMKSSP                 E FI +L  ++       + ++Y+ L   VQ   +LEFLR I+P+K+   ++ +M+ 
Sbjct:   10 IKELRLPISRVKTIMKSSPYVDTIGQDGLYLVTKATELFIHYLTEEAHLQSNKGNFLDYKHLAEVVQTNDTLEFLREIMPRKITVRQFKEMMA 102

[Close]

BLAST of EMLSAG00000001867 vs. nr
Match: gi|290562073|gb|ADD38433.1| (Chromatin accessibility complex protein 1 [Lepeophtheirus salmonis])

HSP 1 Score: 180.644 bits (457), Expect = 2.498e-57
Identity = 94/111 (84.68%), Postives = 94/111 (84.68%), Query Frame = 0

Query:    1 MTRNLDVKNTNLPLTRVRRIMKSSPD----------------EKFISFLANDSLCNGRNKSQIEYEDLVNTVQNQRSLEFLRFILPKKMKFSEYLDMLGREGSPEKVEEFI 95
            MTRNLDVKNTNLPLTRVRRIMKSSPD                EKFISFLANDSLCNG NKSQIEYEDLVNTVQNQRSLEFLRFILPKKMKFSEYLDMLGREGSPEKVEEFI
Sbjct:    1 MTRNLDVKNTNLPLTRVRRIMKSSPDVGNISRETLYLITKATEKFISFLANDSLCNGPNKSQIEYEDLVNTVQNQRSLEFLRFILPKKMKFSEYLDMLGREGSPEKVEEFI 111

[Close]

BLAST of EMLSAG00000001867 vs. nr
Match: gi|225718726|gb|ACO15209.1| (Chromatin accessibility complex protein 1 [Caligus clemensi])

HSP 1 Score: 78.5666 bits (192), Expect = 8.344e-17
Identity = 44/102 (43.14%), Postives = 63/102 (61.76%), Query Frame = 0

Query:    8 KNTNLPLTRVRRIMKSSPD----------------EKFISFLANDSLCNGRNKSQIEYEDLVNTVQNQRSLEFLRFILPKKMKFSEYLDMLGREGSPEKVEE 93
            K+ NLP++RVR IMKSSPD                E FI +L   S  NG N  +++Y+DL   V+ + +LEFL+ I+PKKMK+SEYL  L R+ + E+++E
Sbjct:   17 KDLNLPMSRVRTIMKSSPDIDNISQESLYLITKATEYFIIYLTKLSQKNGANDGKVDYDDLSQVVERKNALEFLQDIIPKKMKYSEYLKSL-RDHAEEEIDE 117

[Close]

BLAST of EMLSAG00000001867 vs. nr
Match: gi|225710198|gb|ACO10945.1| (Chromatin accessibility complex protein 1 [Caligus rogercresseyi])

HSP 1 Score: 77.7962 bits (190), Expect = 1.332e-16
Identity = 43/94 (45.74%), Postives = 59/94 (62.77%), Query Frame = 0

Query:    8 KNTNLPLTRVRRIMKSSPD----------------EKFISFLANDSLCNGRNKSQIEYEDLVNTVQNQRSLEFLRFILPKKMKFSEYLDMLGRE 85
            K+ +LP+TRVR IMKSSPD                E FI +L   S  NG  ++ ++YEDL   VQ + +LEFL+ I+PKK+KFSEYL++L +E
Sbjct:   16 KDLSLPMTRVRTIMKSSPDIDNISQESLYLITKATEYFIIYLTKLSQKNGGKENSLDYEDLSQVVQRKAALEFLQDIIPKKIKFSEYLELLKKE 109

[Close]

BLAST of EMLSAG00000001867 vs. nr
Match: gi|225712896|gb|ACO12294.1| (Chromatin accessibility complex protein 1 [Lepeophtheirus salmonis] >gi|290462639|gb|ADD24367.1| Chromatin accessibility complex protein 1 [Lepeophtheirus salmonis])

HSP 1 Score: 73.9442 bits (180), Expect = 4.761e-15
Identity = 39/94 (41.49%), Postives = 58/94 (61.70%), Query Frame = 0

Query:    8 KNTNLPLTRVRRIMKSSPD----------------EKFISFLANDSLCNGRNKSQIEYEDLVNTVQNQRSLEFLRFILPKKMKFSEYLDMLGRE 85
            K+ +LP++RVR IMKSSPD                E FI +L   S  NG N   ++Y+DL   V+ + +LEFL+ I+PKK+K+SEYL+++ +E
Sbjct:   16 KDVSLPMSRVRTIMKSSPDIDNISQESLYLITKATEYFIIYLTKLSQKNGGNLGNVDYDDLSEVVERKNALEFLQDIIPKKIKYSEYLELMKKE 109

[Close]

BLAST of EMLSAG00000001867 vs. nr
Match: gi|225712860|gb|ACO12276.1| (Chromatin accessibility complex protein 1 [Lepeophtheirus salmonis])

HSP 1 Score: 71.2478 bits (173), Expect = 4.558e-14
Identity = 38/94 (40.43%), Postives = 57/94 (60.64%), Query Frame = 0

Query:    8 KNTNLPLTRVRRIMKSSPD----------------EKFISFLANDSLCNGRNKSQIEYEDLVNTVQNQRSLEFLRFILPKKMKFSEYLDMLGRE 85
            K+ +LP++RVR IMKSSPD                E FI +L   S  NG N   ++Y+ L   V+ + +LEFL+ I+PKK+K+SEYL+++ +E
Sbjct:   16 KDVSLPMSRVRTIMKSSPDIDNISQESLYLITKATEYFIIYLTKLSQKNGGNLGNVDYDHLSEVVERKNALEFLQDIIPKKIKYSEYLELMKKE 109

[Close]

BLAST of EMLSAG00000001867 vs. nr
Match: gi|985419176|ref|XP_015375085.1| (PREDICTED: chromatin accessibility complex protein 1 [Diuraphis noxia])

HSP 1 Score: 68.9366 bits (167), Expect = 6.695e-13
Identity = 37/96 (38.54%), Postives = 55/96 (57.29%), Query Frame = 0

Query:    8 KNTNLPLTRVRRIMKSSPD----------------EKFISFLANDSLCNGRNKSQIEYEDLVNTVQNQRSLEFLRFILPKKMKFSEYLDMLGREGS 87
            K+ +LP++RVR IMKS+PD                E FI  LA D+L   R+   +EY DL   V++  ++ FLR +LPKK+  +EY  ++G+E S
Sbjct:   27 KDMHLPISRVRTIMKSTPDIENIGLPSLHVVTKATELFIQKLAQDALKGQRHFRHLEYNDLARAVEDNENMYFLREVLPKKITMAEYYKLVGKESS 122

[Close]

BLAST of EMLSAG00000001867 vs. nr
Match: gi|961078009|ref|XP_014767478.1| (PREDICTED: chromatin accessibility complex protein 1-like [Octopus bimaculoides] >gi|918332340|gb|KOF95546.1| hypothetical protein OCBIM_22038017mg [Octopus bimaculoides])

HSP 1 Score: 67.3958 bits (163), Expect = 1.406e-12
Identity = 36/87 (41.38%), Postives = 52/87 (59.77%), Query Frame = 0

Query:   12 LPLTRVRRIMKSSPD----------------EKFISFLANDSLCNGRNKSQIEYEDLVNTVQNQRSLEFLRFILPKKMKFSEYLDML 82
            LPL+RV+ IMKSSPD                E F+  LA  SL NGR+  Q++Y DL   V  + +L+FL+ I+P+K+K S+Y ++L
Sbjct:   10 LPLSRVKTIMKSSPDVSSISQEALFLTGKATEFFVQNLARVSLTNGRDGKQLQYGDLAEVVNTEETLQFLQDIIPRKIKASDYFEIL 96

[Close]

BLAST of EMLSAG00000001867 vs. nr
Match: gi|240848745|ref|NP_001155609.1| (chromatin accessibility complex 1-like [Acyrthosiphon pisum] >gi|239792322|dbj|BAH72515.1| ACYPI005177 [Acyrthosiphon pisum])

HSP 1 Score: 68.1662 bits (165), Expect = 1.803e-12
Identity = 37/96 (38.54%), Postives = 54/96 (56.25%), Query Frame = 0

Query:    8 KNTNLPLTRVRRIMKSSPD----------------EKFISFLANDSLCNGRNKSQIEYEDLVNTVQNQRSLEFLRFILPKKMKFSEYLDMLGREGS 87
            K+ +LP++RVR IMKS+PD                E FI  LA D+L   R+   +EY DL   V+   ++ FLR +LPKK+  +EY  ++G+E S
Sbjct:   27 KDMHLPISRVRTIMKSTPDIENIGLPSLHVVTKATELFIQKLAQDALKGQRHFRHLEYNDLARAVEENENMYFLREVLPKKITMAEYYKLVGKESS 122

[Close]

BLAST of EMLSAG00000001867 vs. nr
Match: gi|926644670|ref|XP_013788612.1| (PREDICTED: chromatin accessibility complex protein 1-like isoform X1 [Limulus polyphemus])

HSP 1 Score: 63.5438 bits (153), Expect = 4.659e-11
Identity = 32/88 (36.36%), Postives = 50/88 (56.82%), Query Frame = 0

Query:    8 KNTNLPLTRVRRIMKSSPD----------------EKFISFLANDSLCNGRNKSQIEYEDLVNTVQNQRSLEFLRFILPKKMKFSEYL 79
            K+ + P +R+R IM+SSPD                E F+++LA  +     +K++I+Y+DL   V  Q  LEFL  I+P+K+K +EYL
Sbjct:    9 KHGSFPTSRIRMIMRSSPDVTSISPDSVTLISKAAELFVTYLAQQAHHRNEDKTEIDYDDLAEIVNTQDHLEFLLDIIPRKIKIAEYL 96

[Close]

BLAST of EMLSAG00000001867 vs. nr
Match: gi|926622852|ref|XP_013776826.1| (PREDICTED: chromatin accessibility complex protein 1-like [Limulus polyphemus])

HSP 1 Score: 63.1586 bits (152), Expect = 5.591e-11
Identity = 31/90 (34.44%), Postives = 53/90 (58.89%), Query Frame = 0

Query:    8 KNTNLPLTRVRRIMKSSPD----------------EKFISFLANDSLCNGRNKSQIEYEDLVNTVQNQRSLEFLRFILPKKMKFSEYLDM 81
            K+ + PLTR++ IM+SSPD                E  +  LA  +    ++K++++YED+   V +  SL+FL+ I+P+K+K SEYL++
Sbjct:    9 KHVSFPLTRIKMIMRSSPDVLNISPDSVTLISKAAELLVEHLAKLAHHQSKDKTKVDYEDVAEVVASHESLDFLQDIVPQKIKASEYLNI 98

[Close]

BLAST of EMLSAG00000001867 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold730_size105374-snap-gene-0.24 (protein:Tk06147 transcript:maker-scaffold730_size105374-snap-gene-0.24-mRNA-1 annotation:"chromatin accessibility complex protein 1")

HSP 1 Score: 75.8702 bits (185), Expect = 2.126e-19
Identity = 40/94 (42.55%), Postives = 56/94 (59.57%), Query Frame = 0

Query:    8 KNTNLPLTRVRRIMKSSPD----------------EKFISFLANDSLCNGRNKSQIEYEDLVNTVQNQRSLEFLRFILPKKMKFSEYLDMLGRE 85
            K+ +LP+TRV+ IMKSSPD                E FI +L   +  NG N   + Y+DL + VQ + S+EFL  I+PKK+K+SEYLD++  E
Sbjct:   36 KDVSLPMTRVKTIMKSSPDVETVSQESLFLITKATELFIMYLTKLAQRNGDNDQSVTYQDLASVVQRKDSMEFLHDIVPKKIKYSEYLDIMKSE 129

The following BLAST results are available for this feature:

BLAST of EMLSAG00000001867 vs. GO
BLAST of EMLSAG00000001867 vs. C. finmarchicus
BLAST of EMLSAG00000001867 vs. L. salmonis peptides
BLAST of EMLSAG00000001867 vs. SwissProt
BLAST of EMLSAG00000001867 vs. Select Arthropod Genomes
BLAST of EMLSAG00000001867 vs. nr
BLAST of EMLSAG00000001867 vs. Tigriopus kingsejongenis genes

BLAST of EMLSAG00000001867 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO)
Total hits: 12


Match Name	E-value	Identity	Description
-	4.831e-12	37.89	symbol:Chrac1 "chromatin accessibility complex 1" ...	[more]
-	3.359e-11	38.30	symbol:CHRAC1 "Uncharacterized protein" species:90...	[more]
-	4.216e-11	37.36	symbol:Chrac1 "chromatin accessibility complex 1" ...	[more]
-	5.000e-11	38.89	symbol:CHRAC1 "Chromatin accessibility complex 1" ...	[more]
-	5.923e-11	40.00	symbol:CHRAC1 "Chromatin accessibility complex pro...	[more]
-	2.387e-9	36.56	symbol:chrac1 "chromatin accessibility complex 1" ...	[more]
-	1.345e-7	43.33	symbol:CHRAC1 "Uncharacterized protein" species:98...	[more]
-	5.541e-6	43.10	symbol:CHRAC1 "Chromatin accessibility complex pro...	[more]
-	7.303e-6	33.70	symbol:Chrac-16 "Chromatin accessibility complex 1...	[more]
-	8.577e-6	41.38	symbol:CHRAC1 "Uncharacterized protein" species:96...	[more]

Pages

BLAST of EMLSAG00000001867 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA)
Total hits: 13


Match Name	E-value	Identity	Description
gi\|592938313\|gb\|GAXK01020240.1\|	2.985e-12	39.81	TSA: Calanus finmarchicus comp13148_c2_seq1 transc...	[more]
gi\|592845605\|gb\|GAXK01111939.1\|	5.327e-1	50.00	TSA: Calanus finmarchicus comp52319_c0_seq1 transc...	[more]
gi\|592790368\|gb\|GAXK01164200.1\|	8.581e-1	38.00	TSA: Calanus finmarchicus comp574432_c1_seq1 trans...	[more]
gi\|592767904\|gb\|GAXK01186664.1\|	9.102e-1	50.00	TSA: Calanus finmarchicus comp44192_c0_seq1 transc...	[more]
gi\|592767903\|gb\|GAXK01186665.1\|	1.260e+0	48.28	TSA: Calanus finmarchicus comp44192_c0_seq2 transc...	[more]
gi\|592885787\|gb\|GAXK01072588.1\|	1.880e+0	31.37	TSA: Calanus finmarchicus comp1687669_c0_seq1 tran...	[more]
gi\|592777021\|gb\|GAXK01177547.1\|	2.252e+0	51.43	TSA: Calanus finmarchicus comp278718_c0_seq6 trans...	[more]
gi\|592777022\|gb\|GAXK01177546.1\|	2.253e+0	51.43	TSA: Calanus finmarchicus comp278718_c0_seq5 trans...	[more]
gi\|592777023\|gb\|GAXK01177545.1\|	2.303e+0	51.43	TSA: Calanus finmarchicus comp278718_c0_seq4 trans...	[more]
gi\|592777024\|gb\|GAXK01177544.1\|	2.304e+0	51.43	TSA: Calanus finmarchicus comp278718_c0_seq3 trans...	[more]

Pages

BLAST of EMLSAG00000001867 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self)
Total hits: 2


Match Name	E-value	Identity	Description
EMLSAP00000001867	6.483e-65	100.00	pep:novel supercontig:LSalAtl2s:LSalAtl2s1321:1084...	[more]
EMLSAP00000007292	4.585e-18	41.49	pep:novel supercontig:LSalAtl2s:LSalAtl2s409:3878:...	[more]

BLAST of EMLSAG00000001867 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt)
Total hits: 2


Match Name	E-value	Identity	Description
gi\|22653682\|sp\|Q9JKP8.1\|CHRC1_MOUSE	9.973e-13	37.89	RecName: Full=Chromatin accessibility complex prot...	[more]
gi\|22653683\|sp\|Q9NRG0.1\|CHRC1_HUMAN	1.500e-11	40.00	RecName: Full=Chromatin accessibility complex prot...	[more]

BLAST of EMLSAG00000001867 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods)
Total hits: 5


Match Name	E-value	Identity	Description
EAA04577.4	2.480e-11	36.26	AGAP007481-PA [Anopheles gambiae str. PEST]	[more]
gb\|KFM64750.1\|	3.258e-11	35.42	Chromatin accessibility complex protein 1, partial...	[more]
EFX70446.1	4.278e-9	31.87	hypothetical protein DAPPUDRAFT_309445 [Daphnia pu...	[more]
EEB17148.1	4.417e-9	37.66	Chromatin accessibility complex protein, putative ...	[more]
XP_001122344.1	4.071e-8	30.11	PREDICTED: chromatin accessibility complex protein...	[more]

BLAST of EMLSAG00000001867 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017))
Total hits: 25


Match Name	E-value	Identity	Description
gi\|290562073\|gb\|ADD38433.1\|	2.498e-57	84.68	Chromatin accessibility complex protein 1 [Lepeoph...	[more]
gi\|225718726\|gb\|ACO15209.1\|	8.344e-17	43.14	Chromatin accessibility complex protein 1 [Caligus...	[more]
gi\|225710198\|gb\|ACO10945.1\|	1.332e-16	45.74	Chromatin accessibility complex protein 1 [Caligus...	[more]
gi\|225712896\|gb\|ACO12294.1\|	4.761e-15	41.49	Chromatin accessibility complex protein 1 [Lepeoph...	[more]
gi\|225712860\|gb\|ACO12276.1\|	4.558e-14	40.43	Chromatin accessibility complex protein 1 [Lepeoph...	[more]
gi\|985419176\|ref\|XP_015375085.1\|	6.695e-13	38.54	PREDICTED: chromatin accessibility complex protein...	[more]
gi\|961078009\|ref\|XP_014767478.1\|	1.406e-12	41.38	PREDICTED: chromatin accessibility complex protein...	[more]
gi\|240848745\|ref\|NP_001155609.1\|	1.803e-12	38.54	chromatin accessibility complex 1-like [Acyrthosip...	[more]
gi\|926644670\|ref\|XP_013788612.1\|	4.659e-11	36.36	PREDICTED: chromatin accessibility complex protein...	[more]
gi\|926622852\|ref\|XP_013776826.1\|	5.591e-11	34.44	PREDICTED: chromatin accessibility complex protein...	[more]

Pages

BLAST of EMLSAG00000001867 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins)
Total hits: 1


Match Name	E-value	Identity	Description
maker-scaffold730_size105374-snap-gene-0.24	2.126e-19	42.55	protein:Tk06147 transcript:maker-scaffold730_size1...	[more]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
LSalAtl2s1321	supercontig	LSalAtl2s1321:108432..109109 +

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
ensembl	2013-09-26 .965016
Blast vs. GO	2014-04-02
TblastN vs C. finmarchicus TSA	2014-05-09
Blastp vs. self	2014-05-10
Blastp vs. SwissProt	2017-02-10
Blastp vs. Selected Arthropods	2017-02-20
Blastp vs. NR (2/2017)	2017-02-20
Blastp vs. Tigriopus kingsejongensis proteins	2018-04-18

Properties


Property Name	Value
Logic name	ensemblgenomes
Description	maker-LSalAtl2s1321-augustus-gene-0.16
Biotype	protein_coding
Evidence	IEA
Note	Chromatin accessibility complex protein 1 [Lepeophtheirus salmonis]

Cross References

External references for this gene


Database	Accession
Ensembl Metazoa (gene)	EMLSAG00000001867 (primary cross-reference)

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
EMLSAT00000001867	EMLSAT00000001867-697714	Lepeophtheirus salmonis	mRNA

Sequences

The following sequences are available for this feature:

gene from alignment at LSalAtl2s1321:108432..109109+

gene from alignment at LSalAtl2s1321:108432..109109+

Legend: mRNA

Hold the cursor over a type above to highlight its positions in the sequence below.

>EMLSAG00000001867-684633 ID=EMLSAG00000001867-684633|Name=EMLSAG00000001867|organism=Lepeophtheirus salmonis|type=gene|length=678bp|location=Sequence derived from alignment at LSalAtl2s1321:108432..109109+ (Lepeophtheirus salmonis)
AGATAATCAATAAATTATTGTAAATAACAACATTAAAGTGAGAATGACAA
GGAATTTGGATGTGAAGAATACGAATCTCCCTCTCACCCGTGTTCGTAGA
ATCATGAAGTCATCTCCTGATGTTGGTAACATAAGTCGAGAAACCCTTTA
TCTTATAACAAAAGCAACGGCAATTTTTAAGATACAATATACCACAATTT
TAATGTAATAATAATTATTCTTTATAGGAAAAATTTATCTCATTCCTGGC
AAATGATTCACTTTGTAATGGTCGTAACAAAAGTCAGATAGAGTACGAGG
ATCTAGTGAATACTGTTCAAAATCAGAGATCCCTTGAGTTCCTGCGTTTT
ATCTTACCTAAAAAGATGAAATTTTCCGAGTATTTGGACATGTTGGGAAG
AGAAGGAAGTCCAGAGAAAGTGGAAGAGTTTATTTAGTCCAATTTTATCT
TTTATTGTCGACGTTTGAATATTATGAGCTTTTTTATTTTATGATGTGTT
TATTGTCGAAGTGATATCAGAAAGTACCTGATATTAATTAGAATAAGTCA
TTTACTTGCAATAGAAAATGATAAATTATTATGTGTGATAATTAGTAGAG
TCGTTAATCGATATTTATGTTTATTTATTTGTCCAATTATTTCTTAATGA
ACTGTTTATATTTATTGTGAAAGATGTA

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