EMLSAG00000001874, EMLSAG00000001874-684640 (gene) Lepeophtheirus salmonis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of EMLSAG00000001874 vs. C. finmarchicus
Match: gi|592878692|gb|GAXK01079209.1| (TSA: Calanus finmarchicus comp267685_c0_seq1 transcribed RNA sequence) HSP 1 Score: 31.9574 bits (71), Expect = 8.900e+0 Identity = 24/88 (27.27%), Postives = 36/88 (40.91%), Query Frame = 0 Query: 285 ILPQMAEIQYDREDDVVELPEMMEDSPYSDSSPRSGFIPCLCQTQAEKVIVPI------SEGESHSQELMERDVHQNEGTDLNVWRHS 366 ++ +AEI D + + P S S +P T VI I +E E S+ R+ QN+G DL++ RHS Sbjct: 423 VISSLAEIPTSSRDSDTTISSLASSPPLLLQSSASHHLPSFTDTYTPSVITTIEPRAFGAEAEYISRLKQRRESCQNDGQDLDIQRHS 686
BLAST of EMLSAG00000001874 vs. L. salmonis peptides
Match: EMLSAP00000001874 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1322:17704:19668:-1 gene:EMLSAG00000001874 transcript:EMLSAT00000001874 description:"maker-LSalAtl2s1322-snap-gene-0.39") HSP 1 Score: 1298.11 bits (3358), Expect = 0.000e+0 Identity = 631/631 (100.00%), Postives = 631/631 (100.00%), Query Frame = 0 Query: 1 MDDDSIIKSSQKSFSLKRRILKEKQDNVPNNDSLLKDLFPRDEEQEVDSAFIDSIIKSHQKSFRLKRRILKEKLGNNDTLLKELLAPTDSDDGKQDNSLFILSQKESSSTNKGNSYSNRIKNLPHASQENINISDLGVDDSIADTPSRNKKTIITRRAIPNLNILTESQKITTPKSVTTSIKDFEDNLSFHPNVESTRLLNLTTPRRVSTSQLRPPLNLSSKSLYNIKLRTQQVIEDGTQMSFHKEKEEDPNLSVQTIYNQKLMNNQVREGGMQTSPLPRDDLIILPQMAEIQYDREDDVVELPEMMEDSPYSDSSPRSGFIPCLCQTQAEKVIVPISEGESHSQELMERDVHQNEGTDLNVWRHSNAGIYGPNTSIDNWSSHENNTNVPVAPFSGFIRPFFDSSESESEDAESVVNNNNLHSGEENNHNTIQSKTLTRLKPFTFRERYGFERNMSSDTLQQVVEGGPSKRKNHRKSIFVKNNRVGKNKKMSESIVSFKEGFEYFSRFCPFELTKKAKEAFFKICXLISDILNRVSDEAFYDGGRTKVYLRDVKNVMIQYKCFPPSPKDARYPNQHLYAFLIKHCDTQAAKLLIPPSSFERKKKTSFVDIWDDVDEEMHTTHRKRVLSREK 631 MDDDSIIKSSQKSFSLKRRILKEKQDNVPNNDSLLKDLFPRDEEQEVDSAFIDSIIKSHQKSFRLKRRILKEKLGNNDTLLKELLAPTDSDDGKQDNSLFILSQKESSSTNKGNSYSNRIKNLPHASQENINISDLGVDDSIADTPSRNKKTIITRRAIPNLNILTESQKITTPKSVTTSIKDFEDNLSFHPNVESTRLLNLTTPRRVSTSQLRPPLNLSSKSLYNIKLRTQQVIEDGTQMSFHKEKEEDPNLSVQTIYNQKLMNNQVREGGMQTSPLPRDDLIILPQMAEIQYDREDDVVELPEMMEDSPYSDSSPRSGFIPCLCQTQAEKVIVPISEGESHSQELMERDVHQNEGTDLNVWRHSNAGIYGPNTSIDNWSSHENNTNVPVAPFSGFIRPFFDSSESESEDAESVVNNNNLHSGEENNHNTIQSKTLTRLKPFTFRERYGFERNMSSDTLQQVVEGGPSKRKNHRKSIFVKNNRVGKNKKMSESIVSFKEGFEYFSRFCPFELTKKAKEAFFKICXLISDILNRVSDEAFYDGGRTKVYLRDVKNVMIQYKCFPPSPKDARYPNQHLYAFLIKHCDTQAAKLLIPPSSFERKKKTSFVDIWDDVDEEMHTTHRKRVLSREK Sbjct: 1 MDDDSIIKSSQKSFSLKRRILKEKQDNVPNNDSLLKDLFPRDEEQEVDSAFIDSIIKSHQKSFRLKRRILKEKLGNNDTLLKELLAPTDSDDGKQDNSLFILSQKESSSTNKGNSYSNRIKNLPHASQENINISDLGVDDSIADTPSRNKKTIITRRAIPNLNILTESQKITTPKSVTTSIKDFEDNLSFHPNVESTRLLNLTTPRRVSTSQLRPPLNLSSKSLYNIKLRTQQVIEDGTQMSFHKEKEEDPNLSVQTIYNQKLMNNQVREGGMQTSPLPRDDLIILPQMAEIQYDREDDVVELPEMMEDSPYSDSSPRSGFIPCLCQTQAEKVIVPISEGESHSQELMERDVHQNEGTDLNVWRHSNAGIYGPNTSIDNWSSHENNTNVPVAPFSGFIRPFFDSSESESEDAESVVNNNNLHSGEENNHNTIQSKTLTRLKPFTFRERYGFERNMSSDTLQQVVEGGPSKRKNHRKSIFVKNNRVGKNKKMSESIVSFKEGFEYFSRFCPFELTKKAKEAFFKICXLISDILNRVSDEAFYDGGRTKVYLRDVKNVMIQYKCFPPSPKDARYPNQHLYAFLIKHCDTQAAKLLIPPSSFERKKKTSFVDIWDDVDEEMHTTHRKRVLSREK 631 The following BLAST results are available for this feature:
BLAST of EMLSAG00000001874 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO) Total hits: 0
BLAST of EMLSAG00000001874 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA) Total hits: 1
BLAST of EMLSAG00000001874 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self) Total hits: 1
BLAST of EMLSAG00000001874 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt) Total hits: 0
BLAST of EMLSAG00000001874 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods) Total hits: 0
BLAST of EMLSAG00000001874 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017)) Total hits: 0
BLAST of EMLSAG00000001874 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins) Total hits: 0
Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Cross References
External references for this gene
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at LSalAtl2s1322:17704..19668- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>EMLSAG00000001874-684640 ID=EMLSAG00000001874-684640|Name=EMLSAG00000001874|organism=Lepeophtheirus salmonis|type=gene|length=1965bp|location=Sequence derived from alignment at LSalAtl2s1322:17704..19668- (Lepeophtheirus salmonis)back to top Add to Basket
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