EMLSAG00000001885, EMLSAG00000001885-684651 (gene) Lepeophtheirus salmonis

Overview
NameEMLSAG00000001885
Unique NameEMLSAG00000001885-684651
Typegene
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Homology
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BLAST of EMLSAG00000001885 vs. GO
Match: - (symbol:rabl5 "RAB, member RAS oncogene family-like 5" species:7955 "Danio rerio" [GO:0007264 "small GTPase mediated signal transduction" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR001806 Pfam:PF00071 ZFIN:ZDB-GENE-050417-439 GO:GO:0005525 InterPro:IPR027417 SUPFAM:SSF52540 GO:GO:0007264 CTD:64792 eggNOG:NOG87073 HOGENOM:HOG000232131 HOVERGEN:HBG083943 KO:K07935 EMBL:BC092964 RefSeq:NP_001017884.1 UniGene:Dr.42952 ProteinModelPortal:Q567Y6 Ensembl:ENSDART00000016709 GeneID:550583 KEGG:dre:550583 GeneTree:ENSGT00390000013187 InParanoid:Q567Y6 OMA:LQDTQCL OrthoDB:EOG7FBRJZ TreeFam:TF313208 NextBio:20879820 PRO:PR:Q567Y6 Bgee:Q567Y6 Uniprot:Q567Y6)

HSP 1 Score: 49.2914 bits (116), Expect = 1.785e-7
Identity = 28/72 (38.89%), Postives = 41/72 (56.94%), Query Frame = 0 
Query:   12 ESGKSLIAIFLSDTTKSYQGEFRRTQVVLEFECTILQILNNNNPNTGRFVKTDIELWDISRNADYESSWTAL 83
            E GK+ +A FLSDTT+S   ++  TQ V      IL+  ++N  N  +    D+ELWD + +  +ES W AL
Sbjct:   13 ECGKTALANFLSDTTESIGADYSPTQGV-----RILEFESHNLHNGNKSSSCDVELWDCAGDFKFESCWPAL 79
[Close]
BLAST of EMLSAG00000001885 vs. GO
Match: - (symbol:RABL5 "Rab-like protein 5" species:9606 "Homo sapiens" [GO:0005525 "GTP binding" evidence=IEA] [GO:0007264 "small GTPase mediated signal transduction" evidence=IEA] InterPro:IPR001806 Pfam:PF00071 GO:GO:0005525 InterPro:IPR027417 SUPFAM:SSF52540 GO:GO:0007264 EMBL:CH471197 EMBL:AC006329 CTD:64792 eggNOG:NOG87073 HOGENOM:HOG000232131 HOVERGEN:HBG083943 KO:K07935 OMA:LQDTQCL OrthoDB:EOG7FBRJZ TreeFam:TF313208 EMBL:AK023287 EMBL:AK024179 EMBL:AK298888 EMBL:BC004522 EMBL:BC009823 EMBL:BC038668 EMBL:AL157469 RefSeq:NP_001124292.1 RefSeq:NP_001124293.1 RefSeq:NP_001124294.1 RefSeq:NP_001274454.1 RefSeq:NP_001274455.1 RefSeq:NP_073614.1 UniGene:Hs.389104 ProteinModelPortal:Q9H7X7 BioGrid:122300 PhosphoSite:Q9H7X7 DMDM:74733725 PaxDb:Q9H7X7 PRIDE:Q9H7X7 DNASU:64792 Ensembl:ENST00000315322 Ensembl:ENST00000422177 Ensembl:ENST00000437644 Ensembl:ENST00000498704 Ensembl:ENST00000517481 GeneID:64792 KEGG:hsa:64792 UCSC:uc003uyl.3 UCSC:uc003uym.3 GeneCards:GC07M100956 HGNC:HGNC:21895 HPA:HPA042930 neXtProt:NX_Q9H7X7 PharmGKB:PA134871769 InParanoid:Q9H7X7 ChiTaRS:RABL5 GenomeRNAi:64792 NextBio:66854 PRO:PR:Q9H7X7 ArrayExpress:Q9H7X7 Bgee:Q9H7X7 CleanEx:HS_RABL5 Genevestigator:Q9H7X7 Uniprot:Q9H7X7)

HSP 1 Score: 39.6614 bits (91), Expect = 7.753e-4
Identity = 29/74 (39.19%), Postives = 42/74 (56.76%), Query Frame = 0 
Query:   12 ESGKSLIAIFLSDTTKSYQGEFRRTQVV--LEFECTILQILNNNNPNTGRFVKTDIELWDISRNADYESSWTAL 83
            ESGK+++A FL++++     E+  TQ V  LEFE   +    +NN  TG     + ELWD   +A +ES W AL
Sbjct:   13 ESGKTVLANFLTESSDIT--EYSPTQGVRILEFENPHV---TSNNKGTG----CEFELWDCGGDAKFESCWPAL 77
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BLAST of EMLSAG00000001885 vs. C. finmarchicus
Match: gi|592879895|gb|GAXK01078006.1| (TSA: Calanus finmarchicus comp1133658_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 54.299 bits (129), Expect = 2.008e-9
Identity = 30/74 (40.54%), Postives = 44/74 (59.46%), Query Frame = 0 
Query:   12 ESGKSLIAIFLSDTTKSYQGEFRRTQVV--LEFECTILQILNNNNPNTGRFVKTDIELWDISRNADYESSWTAL 83
            +SGK++IA FL+D T++  GE+R T  V  LEFE   L + N N       +K ++ELWD S +  +E  W A+
Sbjct:  431 QSGKTMIANFLADATENIGGEYRPTAGVRILEFESGNLSVNNKN-------IKAEVELWDSSGSNQFEPCWPAI 631
[Close]
BLAST of EMLSAG00000001885 vs. C. finmarchicus
Match: gi|592808275|gb|GAXK01146293.1| (TSA: Calanus finmarchicus comp1271822_c0_seq5 transcribed RNA sequence)

HSP 1 Score: 28.1054 bits (61), Expect = 2.728e+0
Identity = 14/34 (41.18%), Postives = 20/34 (58.82%), Query Frame = 0 
Query:   20 IFLSDTTKSYQGEFRRTQVVLEFECTILQILNNN 53
            I + +  K YQG  +  + +LE +C  L ILNNN
Sbjct:  272 ITMVNKVKPYQGYRKVGKTLLENKCRSLGILNNN 373
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BLAST of EMLSAG00000001885 vs. C. finmarchicus
Match: gi|592880890|gb|GAXK01077011.1| (TSA: Calanus finmarchicus comp5403248_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 28.1054 bits (61), Expect = 2.800e+0
Identity = 13/33 (39.39%), Postives = 20/33 (60.61%), Query Frame = 0 
Query:   34 RRTQV-VLEFECTILQILNNNNPNTGRFVKTDI 65
            R+  V +LE  C++  ILN   PN+ RF+  D+
Sbjct:  274 RKMNVSILEKFCSLFCILNATTPNSSRFILDDL 372
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BLAST of EMLSAG00000001885 vs. C. finmarchicus
Match: gi|592808276|gb|GAXK01146292.1| (TSA: Calanus finmarchicus comp1271822_c0_seq4 transcribed RNA sequence)

HSP 1 Score: 28.1054 bits (61), Expect = 2.904e+0
Identity = 14/34 (41.18%), Postives = 20/34 (58.82%), Query Frame = 0 
Query:   20 IFLSDTTKSYQGEFRRTQVVLEFECTILQILNNN 53
            I + +  K YQG  +  + +LE +C  L ILNNN
Sbjct:  284 ITMVNKVKPYQGYRKVGKTLLENKCRSLGILNNN 385
[Close]
BLAST of EMLSAG00000001885 vs. C. finmarchicus
Match: gi|592808277|gb|GAXK01146291.1| (TSA: Calanus finmarchicus comp1271822_c0_seq3 transcribed RNA sequence)

HSP 1 Score: 28.1054 bits (61), Expect = 2.904e+0
Identity = 14/34 (41.18%), Postives = 20/34 (58.82%), Query Frame = 0 
Query:   20 IFLSDTTKSYQGEFRRTQVVLEFECTILQILNNN 53
            I + +  K YQG  +  + +LE +C  L ILNNN
Sbjct:  266 ITMVNKVKPYQGYRKVGKTLLENKCRSLGILNNN 367
[Close]
BLAST of EMLSAG00000001885 vs. C. finmarchicus
Match: gi|592928862|gb|GAXK01029683.1| (TSA: Calanus finmarchicus comp1654911_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 26.9498 bits (58), Expect = 9.229e+0
Identity = 19/60 (31.67%), Postives = 30/60 (50.00%), Query Frame = 0 
Query:   26 TKSYQGEFRRTQVVLEFECTILQILNNNNPNTGRFVKTDIELW-----DISRNADYESSW 80
             K+ + +F R + ++E ECTI     N +   G+FV    ELW     + S+N D E  +
Sbjct:  399 VKATKNQFPREETLIENECTIPPGCVNLDGRQGKFVN---ELWHARVFEPSQNWDREGDF 569
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BLAST of EMLSAG00000001885 vs. L. salmonis peptides
Match: EMLSAP00000001885 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1324:3011:9304:1 gene:EMLSAG00000001885 transcript:EMLSAT00000001885 description:"maker-LSalAtl2s1324-snap-gene-0.17")

HSP 1 Score: 172.555 bits (436), Expect = 4.056e-57
Identity = 83/83 (100.00%), Postives = 83/83 (100.00%), Query Frame = 0 
Query:    1 MCGYTQKTTTIESGKSLIAIFLSDTTKSYQGEFRRTQVVLEFECTILQILNNNNPNTGRFVKTDIELWDISRNADYESSWTAL 83
            MCGYTQKTTTIESGKSLIAIFLSDTTKSYQGEFRRTQVVLEFECTILQILNNNNPNTGRFVKTDIELWDISRNADYESSWTAL
Sbjct:    1 MCGYTQKTTTIESGKSLIAIFLSDTTKSYQGEFRRTQVVLEFECTILQILNNNNPNTGRFVKTDIELWDISRNADYESSWTAL 83
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BLAST of EMLSAG00000001885 vs. SwissProt
Match: gi|82179474|sp|Q5M8K8.1|IFT22_XENTR (RecName: Full=Intraflagellar transport protein 22 homolog; AltName: Full=Rab-like protein 5)

HSP 1 Score: 53.1434 bits (126), Expect = 4.979e-9
Identity = 28/74 (37.84%), Postives = 42/74 (56.76%), Query Frame = 0 
Query:   12 ESGKSLIAIFLSDTTKSYQGEFRRTQVV--LEFECTILQILNNNNPNTGRFVKTDIELWDISRNADYESSWTAL 83
            ESGK+++A F+SD T++  GE+  TQ V  LEFEC          PN  +    ++ELWD   ++ +ES W  +
Sbjct:   13 ESGKTILANFISDATETIGGEYNPTQGVRILEFEC----------PNGNKGSSCEVELWDCGGDSKFESCWPVI 76
[Close]
BLAST of EMLSAG00000001885 vs. SwissProt
Match: gi|82178175|sp|Q567Y6.1|IFT22_DANRE (RecName: Full=Intraflagellar transport protein 22 homolog; AltName: Full=Rab-like protein 5)

HSP 1 Score: 49.2914 bits (116), Expect = 1.176e-7
Identity = 28/72 (38.89%), Postives = 41/72 (56.94%), Query Frame = 0 
Query:   12 ESGKSLIAIFLSDTTKSYQGEFRRTQVVLEFECTILQILNNNNPNTGRFVKTDIELWDISRNADYESSWTAL 83
            E GK+ +A FLSDTT+S   ++  TQ V      IL+  ++N  N  +    D+ELWD + +  +ES W AL
Sbjct:   13 ECGKTALANFLSDTTESIGADYSPTQGV-----RILEFESHNLHNGNKSSSCDVELWDCAGDFKFESCWPAL 79
[Close]
BLAST of EMLSAG00000001885 vs. Select Arthropod Genomes
Match: gb|KFM79720.1| (Rab-like protein 5, partial [Stegodyphus mimosarum])

HSP 1 Score: 51.2174 bits (121), Expect = 1.281e-8
Identity = 29/74 (39.19%), Postives = 42/74 (56.76%), Query Frame = 0 
Query:   12 ESGKSLIAIFLSDTTKSYQGEFRRTQVV--LEFECTILQILNNNNPNTGRFVKTDIELWDISRNADYESSWTAL 83
            E GK++I+ FL+D T++   ++  TQ V  LEFE   L I        GR  K ++ELWD S +  +E+ W AL
Sbjct:   13 ECGKTVISNFLADATETISNDYHPTQGVRILEFESDSLNI-------GGRIAKAEVELWDCSGDTKFENCWPAL 79
[Close]
BLAST of EMLSAG00000001885 vs. nr
Match: gi|573906336|ref|XP_006640888.1| (PREDICTED: intraflagellar transport protein 22 homolog isoform X2 [Lepisosteus oculatus])

HSP 1 Score: 59.6918 bits (143), Expect = 3.834e-9
Identity = 32/74 (43.24%), Postives = 45/74 (60.81%), Query Frame = 0 
Query:   12 ESGKSLIAIFLSDTTKSYQGEFRRTQVV--LEFECTILQILNNNNPNTGRFVKTDIELWDISRNADYESSWTAL 83
            E GKS++A FLSDTT++  GE+  TQ V  LEFEC  L         +G+ V  ++ELWD + +  +ES W A+
Sbjct:   13 ECGKSVVANFLSDTTETVGGEYNPTQGVRILEFECQSLG-------GSGKNVGCEVELWDCAGDLKFESCWPAM 79
[Close]
BLAST of EMLSAG00000001885 vs. nr
Match: gi|196011744|ref|XP_002115735.1| (hypothetical protein TRIADDRAFT_59732 [Trichoplax adhaerens] >gi|190581511|gb|EDV21587.1| hypothetical protein TRIADDRAFT_59732 [Trichoplax adhaerens])

HSP 1 Score: 58.9214 bits (141), Expect = 6.716e-9
Identity = 35/74 (47.30%), Postives = 48/74 (64.86%), Query Frame = 0 
Query:   12 ESGKSLIAIFLSDTTKSYQGEFRRTQVV--LEFECTILQILNNNNPNTGRFVKTDIELWDISRNADYESSWTAL 83
            +SGKS+IA  L++ T    G +R T+ V  LEFEC  L+  N++N    R +K D+ELWD S N+DYES W A+
Sbjct:    6 DSGKSVIANSLAEATDLTGGNYRPTKGVRILEFECNGLR--NSSN----RTLKADVELWDCSGNSDYESCWPAM 73
[Close]
BLAST of EMLSAG00000001885 vs. nr
Match: gi|1058083498|gb|JAS45410.1| (hypothetical protein g.20437 [Cuerna arida] >gi|1058113061|gb|JAS60179.1| hypothetical protein g.20436 [Cuerna arida])

HSP 1 Score: 58.151 bits (139), Expect = 1.314e-8
Identity = 36/74 (48.65%), Postives = 48/74 (64.86%), Query Frame = 0 
Query:   12 ESGKSLIAIFLSDTTKSYQGEFRRTQVV--LEFECTILQILNNNNPNTGRFVKTDIELWDISRNADYESSWTAL 83
            +SGK+ IA FLSD+T++  GE+R TQ V  +EFE        N+N N G F KTDIELWD S +  +E+ W A+
Sbjct:   13 KSGKTTIANFLSDSTENVGGEYRPTQGVRIVEFETQ------NSNVNNGGF-KTDIELWDCSGDLKFENFWPAI 79
[Close]
BLAST of EMLSAG00000001885 vs. nr
Match: gi|973206274|ref|XP_015222760.1| (PREDICTED: intraflagellar transport protein 22 homolog isoform X1 [Lepisosteus oculatus])

HSP 1 Score: 58.151 bits (139), Expect = 1.677e-8
Identity = 31/72 (43.06%), Postives = 44/72 (61.11%), Query Frame = 0 
Query:   14 GKSLIAIFLSDTTKSYQGEFRRTQVV--LEFECTILQILNNNNPNTGRFVKTDIELWDISRNADYESSWTAL 83
            GKS++A FLSDTT++  GE+  TQ V  LEFEC  L         +G+ V  ++ELWD + +  +ES W A+
Sbjct:   19 GKSVVANFLSDTTETVGGEYNPTQGVRILEFECQSLG-------GSGKNVGCEVELWDCAGDLKFESCWPAM 83
[Close]
BLAST of EMLSAG00000001885 vs. nr
Match: gi|1058029647|gb|JAS18485.1| (hypothetical protein g.1777 [Clastoptera arizonana])

HSP 1 Score: 57.7658 bits (138), Expect = 2.229e-8
Identity = 35/74 (47.30%), Postives = 46/74 (62.16%), Query Frame = 0 
Query:   12 ESGKSLIAIFLSDTTKSYQGEFRRTQVV--LEFECTILQILNNNNPNTGRFVKTDIELWDISRNADYESSWTAL 83
            +SGKS IA FLSD+T +  GE+R TQ V  +EFE      LN NN    R +K DIELWD S +  +E++W  +
Sbjct:   12 KSGKSTIANFLSDSTDNVSGEYRPTQGVRIVEFEIH----LNVNN----RNIKADIELWDCSGDKKFETTWPVM 77
[Close]
BLAST of EMLSAG00000001885 vs. nr
Match: gi|156380854|ref|XP_001631982.1| (predicted protein [Nematostella vectensis] >gi|156219031|gb|EDO39919.1| predicted protein [Nematostella vectensis])

HSP 1 Score: 57.7658 bits (138), Expect = 2.325e-8
Identity = 31/74 (41.89%), Postives = 43/74 (58.11%), Query Frame = 0 
Query:   12 ESGKSLIAIFLSDTTKSYQGEFRRTQVV--LEFECTILQILNNNNPNTGRFVKTDIELWDISRNADYESSWTAL 83
            ESGK++IA FLSD T++  G++  TQ V  LEFEC  ++I        GR    ++ELWD S N  + + W A 
Sbjct:   13 ESGKTVIANFLSDATETSGGDYHPTQGVRILEFECNSIEI------TPGRTANCEVELWDCSGNHRFSTCWPAF 80
[Close]
BLAST of EMLSAG00000001885 vs. nr
Match: gi|646713885|gb|KDR18061.1| (Rab-like protein 5 [Zootermopsis nevadensis])

HSP 1 Score: 57.3806 bits (137), Expect = 3.395e-8
Identity = 36/73 (49.32%), Postives = 46/73 (63.01%), Query Frame = 0 
Query:   13 SGKSLIAIFLSDTTKSYQGEFRRTQVV--LEFECTILQILNNNNPNTGRFVKTDIELWDISRNADYESSWTAL 83
            SGK+ IA FLSD T++  GE+R TQ V  LEFE   +Q LN NN      +K +IELWD S +  +E+ W AL
Sbjct:   14 SGKTTIANFLSDATENSSGEYRPTQGVRILEFE---MQNLNVNNEK----LKAEIELWDCSGDHKFEACWPAL 79
[Close]
BLAST of EMLSAG00000001885 vs. nr
Match: gi|831484431|ref|XP_012738130.1| (PREDICTED: intraflagellar transport protein 22 homolog [Fundulus heteroclitus])

HSP 1 Score: 56.9954 bits (136), Expect = 4.147e-8
Identity = 37/75 (49.33%), Postives = 48/75 (64.00%), Query Frame = 0 
Query:   12 ESGKSLIAIFLSDTTKSYQGEFRRTQVV--LEFECTILQILNNNNPNTGRFVKT-DIELWDISRNADYESSWTAL 83
            ESGK+++A FLSDTT++  GE+R TQ V  LEFE         + P+ G  VKT ++ELWD S +  YES W AL
Sbjct:   13 ESGKTVLANFLSDTTETVGGEYRPTQGVRILEFE---------SQPD-GSDVKTCEVELWDCSGDFKYESCWPAL 77
[Close]
BLAST of EMLSAG00000001885 vs. nr
Match: gi|632979728|ref|XP_007906633.1| (PREDICTED: rab-like protein 5 isoform X1 [Callorhinchus milii])

HSP 1 Score: 56.9954 bits (136), Expect = 4.352e-8
Identity = 32/74 (43.24%), Postives = 45/74 (60.81%), Query Frame = 0 
Query:   12 ESGKSLIAIFLSDTTKSYQGEFRRTQVV--LEFECTILQILNNNNPNTGRFVKTDIELWDISRNADYESSWTAL 83
            ESGK++++ FLSDTT+S  G++  TQ V  LEFEC        N    G+ V  ++ELWD S +  +E+ W AL
Sbjct:   13 ESGKTVLSNFLSDTTESIGGDYSPTQGVRILEFECP-------NVSANGKSVGCEVELWDCSGDQKFETCWPAL 79
[Close]
BLAST of EMLSAG00000001885 vs. nr
Match: gi|632979730|ref|XP_007906634.1| (PREDICTED: rab-like protein 5 isoform X2 [Callorhinchus milii])

HSP 1 Score: 56.225 bits (134), Expect = 8.805e-8
Identity = 31/74 (41.89%), Postives = 45/74 (60.81%), Query Frame = 0 
Query:   12 ESGKSLIAIFLSDTTKSYQGEFRRTQVV--LEFECTILQILNNNNPNTGRFVKTDIELWDISRNADYESSWTAL 83
            +SGK++++ FLSDTT+S  G++  TQ V  LEFEC        N    G+ V  ++ELWD S +  +E+ W AL
Sbjct:   10 QSGKTVLSNFLSDTTESIGGDYSPTQGVRILEFECP-------NVSANGKSVGCEVELWDCSGDQKFETCWPAL 76
[Close]
BLAST of EMLSAG00000001885 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold289_size220122-snap-gene-1.28 (protein:Tk01623 transcript:maker-scaffold289_size220122-snap-gene-1.28-mRNA-1 annotation:"rab-like protein 5")

HSP 1 Score: 52.7582 bits (125), Expect = 3.017e-10
Identity = 33/75 (44.00%), Postives = 45/75 (60.00%), Query Frame = 0 
Query:   12 ESGKSLIAIFLSDTTKS-YQGEFRRTQVV--LEFECTILQILNNNNPNTGRFVKTDIELWDISRNADYESSWTAL 83
            E+GK+ +A F+SD T+S     +R T  V  +EFE       NN N N  R+VK +IELWD+S N  +E +W AL
Sbjct:   13 EAGKTTLANFISDATESPVNSTYRPTHSVRIVEFEA------NNVNMNN-RYVKAEIELWDVSGNPAFEPTWPAL 80
The following BLAST results are available for this feature:
BLAST of EMLSAG00000001885 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO)
Total hits: 2
Match NameE-valueIdentityDescription
-1.785e-738.89symbol:rabl5 "RAB, member RAS oncogene family-like... [more]
-7.753e-439.19symbol:RABL5 "Rab-like protein 5" species:9606 "Ho... [more]
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BLAST of EMLSAG00000001885 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA)
Total hits: 6
Match NameE-valueIdentityDescription
gi|592879895|gb|GAXK01078006.1|2.008e-940.54TSA: Calanus finmarchicus comp1133658_c0_seq1 tran... [more]
gi|592808275|gb|GAXK01146293.1|2.728e+041.18TSA: Calanus finmarchicus comp1271822_c0_seq5 tran... [more]
gi|592880890|gb|GAXK01077011.1|2.800e+039.39TSA: Calanus finmarchicus comp5403248_c0_seq1 tran... [more]
gi|592808276|gb|GAXK01146292.1|2.904e+041.18TSA: Calanus finmarchicus comp1271822_c0_seq4 tran... [more]
gi|592808277|gb|GAXK01146291.1|2.904e+041.18TSA: Calanus finmarchicus comp1271822_c0_seq3 tran... [more]
gi|592928862|gb|GAXK01029683.1|9.229e+031.67TSA: Calanus finmarchicus comp1654911_c0_seq1 tran... [more]
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BLAST of EMLSAG00000001885 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self)
Total hits: 1
Match NameE-valueIdentityDescription
EMLSAP000000018854.056e-57100.00pep:novel supercontig:LSalAtl2s:LSalAtl2s1324:3011... [more]
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BLAST of EMLSAG00000001885 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
gi|82179474|sp|Q5M8K8.1|IFT22_XENTR4.979e-937.84RecName: Full=Intraflagellar transport protein 22 ... [more]
gi|82178175|sp|Q567Y6.1|IFT22_DANRE1.176e-738.89RecName: Full=Intraflagellar transport protein 22 ... [more]
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BLAST of EMLSAG00000001885 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods)
Total hits: 1
Match NameE-valueIdentityDescription
gb|KFM79720.1|1.281e-839.19Rab-like protein 5, partial [Stegodyphus mimosarum... [more]
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BLAST of EMLSAG00000001885 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017))
Total hits: 16
Match NameE-valueIdentityDescription
gi|573906336|ref|XP_006640888.1|3.834e-943.24PREDICTED: intraflagellar transport protein 22 hom... [more]
gi|196011744|ref|XP_002115735.1|6.716e-947.30hypothetical protein TRIADDRAFT_59732 [Trichoplax ... [more]
gi|1058083498|gb|JAS45410.1|1.314e-848.65hypothetical protein g.20437 [Cuerna arida] >gi|10... [more]
gi|973206274|ref|XP_015222760.1|1.677e-843.06PREDICTED: intraflagellar transport protein 22 hom... [more]
gi|1058029647|gb|JAS18485.1|2.229e-847.30hypothetical protein g.1777 [Clastoptera arizonana... [more]
gi|156380854|ref|XP_001631982.1|2.325e-841.89predicted protein [Nematostella vectensis] >gi|156... [more]
gi|646713885|gb|KDR18061.1|3.395e-849.32Rab-like protein 5 [Zootermopsis nevadensis][more]
gi|831484431|ref|XP_012738130.1|4.147e-849.33PREDICTED: intraflagellar transport protein 22 hom... [more]
gi|632979728|ref|XP_007906633.1|4.352e-843.24PREDICTED: rab-like protein 5 isoform X1 [Callorhi... [more]
gi|632979730|ref|XP_007906634.1|8.805e-841.89PREDICTED: rab-like protein 5 isoform X2 [Callorhi... [more]

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BLAST of EMLSAG00000001885 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins)
Total hits: 1
Match NameE-valueIdentityDescription
maker-scaffold289_size220122-snap-gene-1.283.017e-1044.00protein:Tk01623 transcript:maker-scaffold289_size2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1324supercontigLSalAtl2s1324:3011..9304 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Blast vs. GO2014-04-02
TblastN vs C. finmarchicus TSA2014-05-09
Blastp vs. self2014-05-10
Blastp vs. SwissProt2017-02-10
Blastp vs. Selected Arthropods2017-02-20
Blastp vs. NR (2/2017)2017-02-20
Blastp vs. Tigriopus kingsejongensis proteins2018-04-18
Properties
Property NameValue
Logic nameensemblgenomes
Descriptionmaker-LSalAtl2s1324-snap-gene-0.17
Biotypeprotein_coding
EvidenceIEA
NoteIntraflagellar transport protein 22 homolog
Cross References
External references for this gene
DatabaseAccession
Ensembl Metazoa (gene)EMLSAG00000001885 (primary cross-reference)
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
EMLSAT00000001885EMLSAT00000001885-697732Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at LSalAtl2s1324:3011..9304+

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAG00000001885-684651 ID=EMLSAG00000001885-684651|Name=EMLSAG00000001885|organism=Lepeophtheirus salmonis|type=gene|length=6294bp|location=Sequence derived from alignment at LSalAtl2s1324:3011..9304+ (Lepeophtheirus salmonis)
ATGTGTGGTTATACTGTATGTCGGGTCATGAATTTTTCAACTACATGTGT
GTTAAGAAATCCATGGTCAGGGACATGCCTAATTTGAAAAGGTGTGAGGC
CTATTGTTTAGGCCAGAGGCGGGKAAATAAAAATCATCAATAAAATAACC
AACAAGTATTTTGCTGTATAATGAATGTGAATTGAAATAATAACAATTAA
ACTATTTAACAATTGATAGACTTGCAAATATTAAAAAGTCCATGGATCTA
AAAGAGATTATACTTAAATGTAATTATATTATTTAATATTACGTAAAAAT
TTCTAGCTTATAATCACGCAACCCTGGATATTTTCTTTTCAGGTCTCCTT
AATTTTTTTTATGATTAATTATTAATTATACAATATCAGATCCCTCGTTA
CAAACTGGGTTGCTATATTCTTGTAATTTAGTTGATTTATTTCGTGAAAC
TCATTAAGCAACATCCATATTTCAATTTACATTAAGATCTCTTATAAATT
TCTTCATTTAAATTCGCAAATATGGTATACAATATGATGATACACCAAAA
TTTTATCATTATCACTTACCCGGGTCAGTATATTACAATGAAATCGATAA
CTATAAGTATTATAAATTATATTTGGGACAGCAAGTTAAATAAATATGTA
TAATTAAAAAAAAACACCTTAAATTATCATTTAAAATATTACTTAGAAAT
ACTCATAATATAGATTATATACAGAAGATCAAACAAATAAATAATGACAA
ATGGGGTGATAAAAAAGTTATTAATATTCATTATGTTATATGGATTCAAC
AAAAAATTATACATAGAACATAGTTGAAGATTTGACACCGGTTTCACTAC
CAAAAGTAAGAAAAAATATTTAGGGTAGAAAATAAACATTGAGAATCGTT
AATTAAGTCTTTTTTTAGGGTAAAAATGTCTTTAGATTATGTTTTTGTAT
GTTTCAATACTGTATTTTGTATTGTTTATATAAGAAATTTGAATTTGTGA
CCAAATGAAAGTTTTTTGCGTGACAGGACTACAGGCTTGATTTATATTTC
ATTTTATTGAAAATTTAATAAGTTTTAATTGATACCTAATTTATACTATT
TCTAGTATAGGAACATTAGAAGAAAAAAAATACTACGCCTACTCCCTAAT
TTTATTGACATGTGAAAAAATACATGTGATTAAAATGGATGGTACATAAA
ACCAGTGGAGCTACATACTTGAAAATTTGATTGTTTGTACCTGAAATAGT
ATATTTTAGGCTGATGTGTTTATTTTTATCGTATCAGCTATAATGTTTCG
GATTTTTTTTAATGATTTATGCATTTAAACTTTTAGTGCAAAATTTTGAT
TACATGGGGCCTCAACCAAAATACGGAATGAGCAATATTCGTGAAAACTT
AATAGATTATAACCAACATATACTTCTTTATGAAAATAATACTCAATTTG
AGTCAAACTACTAAATACTTATGGAATTTTTATTTTTTATTTGACGAAGT
AACAGAAACTCGATTTTTGACCAAAATATCCATATTCCGAGACGCACGAT
ATTGCGCAATCATATGATAAGACACTATTTGATATTGACTAACTCAAGGT
CCAATTTTTCACAAAACAACTACAAACTACATATATTTGACTAATTGATT
CATTTATAGAATTTGAAAATGCTGAAGAGATATTTTTATTTCCTTCAAAT
TAGACATACCTATACAAAANCAAACTACATATATTTGACTAATTGATTCA
TTTATAGAATTTGAAAATGCTGAAGAGATATTTTTATTWCCTTCAAATTA
GACATACCTATACAAAAATGAGTTKAKCTAAAAAACCATTTATTTATTTT
TGTATTAGTGACTTCAGATTTGAAGTTTACATAGTTACATTTGGATTTAG
AAAATATTTATTACTCATATGAATTCAATACTTGATATTTTCACAATTTT
CCCAGTGAAACCGGGGTTGAATCTCAGTCATATACAAAATTAAATGGGTC
ATTTATTCATAAAAGTAAATGTAAATATTTAGAAACATGAAATATGCCCA
GTTTTTCAGTTTTGACATAATTAAACGGATGTTTGAAACCTTTGAAACAG
TTTTTCCTGCCTATTGGATGTATTTTTCGAGTACCATTTTTGGGATAATA
TTGAACATAGGTTTTTATTTCAAATTATATTTGATTTGGTATTGAAAATA
AAACACATTAGCTTGGCGTAGATCTTTAACAATAGTAAAGCTTACAAGTA
AAGGCAGTTACCCTTCTGAAGCGTTAATGACCTTGGTGATTGGCCCGAGA
TAATTATGAATTATTGAACTTGTAAATAAAAAAATTCATCATTTATAATC
TCCTTAACAATGAAGGATGTTTGTTCACAAAGGTTGTTTAATTTTCAAAT
GTATTTGTTTCTTATTTCATTATATTGTCTTTTTTAAATTTGAATTGAAA
ATAAAGTGTGCTGTAGAATAAAAGTAGACCTAAAATGAGTGATTGTTATT
CAAAATCTATTCATAATAGCAAAAGACCACAACGATTGAGGTAAGTATTA
TTTTGTGTCCAGTCTCTATTTTTGTTCTATTAAACAATGCACATATCCAT
ATGATTTTTCATTGCCGACTCTCAGATATGTGTCCGATAAAATGAAACAT
TTTATGGACAAATTTGATTCTGAAGATGAGGATGACATGTACGTTGCATC
TGACATTGACAACTATATACCAGAAGTTGAAGTTGTCATTGAAGAAGCTT
CCGACATTGAAGAAGAAATTGTGATAAGCATGAACAAGAATATGACTCGG
ACGAAAGCGTTGTACTTGTAGAGTTGTATCTCAAGTACAACTTGAATCGC
GAAGGATGAAACTGAATGTCATAAAAATCCAGTCCCTAAGGTGCAAACAA
GATTGCGTAACATTCTTCGACAAAGAAGTGGACCTGCAGTTAACACCAAC
ATATTTACAGAAAAAGAGCTATTCATGTATATCATCAGTCCAGAGATGTG
TAACATCATATTGAGAGAAACAAATCTAAAAGTTAGGAGAGTTGGTGAAG
CTTTTAACAATAGCCTCATCCTAAGATATACAAATATTTCTGTTCGGCCA
ACACTTATATTTCAATCTAGCCCTTTACTAATGTTGAGCTCCATATATTT
TTTAGAATTCTTATTGCTGCTAGTGTACATCGAAATAATATGGAAAATCT
TAAAGATATGTGGAAAAGGGATACTCTACCTTTTATACGTGCAGCTATAC
CTCGTAACTGCTTCAAGATGATGCTCCACTGTATTAGATTTGACTACGAA
AACACACGTGCAGAACGTGCTCAAACGGATAAAGCTGCACCAATACGACA
TCTTTGGCTTATTCAAAATAATAATTTGCAGAACAAATTACAAACTAAAT
GAATGTATCACCATTGATTAATAATTATTTCCATTTCAAGGGTATACAAA
ATTAACTCAATATATACAATCTAAACCATCTAGGTAGGGCATTAAGATTT
TTGGGGCTTGTGATGAATCCAACGTTTACCCTCTACATGGTAAACTCTAT
ACTGGAAAACCAGTAGATGGGCCAGACAGGTGAATCTTCGTAAAAACCTG
TTTTAGATCTAGTATATATGTGTAAAGGCTCCGGAAGAAACATCACCATC
GACAATTTCTTTACAACAATGGAGGTGGATAAAGTATTGAACAATTGGGA
TATGACATTAGTTGGAACAGTCAGAAAAAACAAAAGATTCCTACCCAGTA
ATATACAATCAAGAAAGGAAAGGGCAGTTTAATCGACCAAATTTGCCTAA
GATTAAGAGGCACATGTTTGTTCATATGTACCAAAGAAAAAAAACAGTTG
AGCATCTGTCATCGATGCATATGAATGGTGAATTTGATGTCATACAATCC
AACAAACCAGAGATTATCATATATTATAACAAAACCAAAGGCGGTGTAGA
CACATTGGACAAAATGCTGGGCGAGTACACTGTAAAACGAAGAAGAATGC
ACTGACCTTTGGCATTTTTCTATAACATAATCGGCGTCACTGCTTTAGCG
TCGTATATCATCTACAGGGAAAACAACCCAGGGCTAAGGAAAAAAGACCA
AAAGAGAAAGTTAGTAAAATATCTTGCAAAACAACTATAAGTGCATGCAA
TAGAATCTCGTTCTAGTAAATGGATGGTTAAGTGACACTTTTATCTTCAA
GCTGAAGTGGAAATGGTCTTAGGGCAGCATATGATCCAAAAGTACTAGAT
GGAAGTCGTAGAGCTACCCCAATTGTTGGCACTTGTTATACTTGCCGAGG
CCATAAACAAAATCGCCGTAAGAAAAAACTATGTGTATGAATGGTAAAAG
TGTCTAAATTTACCTCGAAAATGCTATAATAGATTTTTTTTCCGTAATAA
AATTTTATTTTCATAAAACACTTTACTAGATATTAAAAAAATCATTGGTA
CATTCAGAAGCTATTCAGCTAATAAACACAAGGCTACAATTGGATCCATG
CTGCCTCTTAAGGGTGAGAAAAAACTTTTCTACCCTGTCTTGATATCTGC
AAATATTTCCGCCCGAAAAATAGTGTAGATAATTTAGTAAAAAAATGAAG
AGATGTCAAGAAATCTTAGAGCTCTCAGATGTCTAGAAAAAAAAGTTAGA
CATACTTTACTATTACAATGGGTACAATTGTACCCATACCGTCCGACGAA
GGTTAAACAGAGCATAAGTATAGAATAACTTATTACTTTGTGTATTTATG
ATATATAATAAGTTTTTAAATAGCCATGACATATCAAGGCAGAGTAGGGA
ATTGACTTTTAACAACAAAATTAATAGGCTATTTTTATTTTAGCAAGGTA
ACGACCTGGGAATAGATGGGACCTTCTATTTATTATTGTTTCTATTACAC
GCAAATATGTTATGAATTAGTTGTCACACGTACACATCTCTTGTATATGT
ATAACAAAACGACAAATCGACTCCTCAATTTACCATTACATTAACCACAG
AATAACTTAAAACATTAAGTTATAAAACAGAGTTGCGAAACGAAGCACCA
CGTGATTAATATTTGTACAATGTAATGATCATGATGACAATTCTTTTTCT
GAAGTAAAGGGATTGAATTCTATAACGCAACCTCTATGAATTTACCCTTC
TAACTAAATTAACAAGGTAAATTCTGCCACGAAAATAAAGTTTAGCATTC
GGTAGAAGGAAAATGAGCAAAAATTATGTAGTGATTTCGTCATATGTGAT
ATGATAAAACGCGCCATCTTTCGTTGGAAAAAGATATATCTACGACCATT
TATCCCCTCAAGCTATCAAGCCCGGGTTGTTACTCTATTTTAATGATTTA
CCCTACTGTATTCATCAAAGGGTAGATAATTATAGCTAAGGATGTCATTT
TTGTAATGAACAAAACTAAGTTTTGGAATTAAAAAGAAGGAAAAACAATT
GTTGCGTGTGTTATATCTTTTATTAATTTAATAGCGAATAAATCATCTTA
ATGTTAACTTCTCCCTCTGAAGTAAGCAATCTTACTTATCTTTGCTTCAA
ATTGTTTTAAAAATATATAATAAAATAAATATATTTGAACTTAAATATAA
TGATTATATTTTACATGCACTAATGATATTTTAAATGTAGAACTTTCTCT
TCTTTATACCATATATTAGCTGACTGATAGTAACAAGGGTTTTAATTCAG
AAATACTTTAAAAATCGCTCCTGCCTTCTCCTCGTGTTCGTTTTTCCATT
ACAAAAATGGCATTTTAGGGAAATTACAGAGAAAAATACGTTTATTTTAT
ATTCAAAATTATCAAAAAAGTAATTAAAAAAATTACTTATATAACTTGTA
AGTTTAGACCACAAAAATGGTCAACATTAACAATGCTAACGTCACATGAA
AATGCTCTATAAGTTATTTATTATCTATAATACTCTTTAAAAAAGTAATT
GAGTATCATCAACTCTCAATTCTGTCTACATTTTAGAAGCTATATAAAAG
TTGAATATGATATTTGTCGGACCAAAATTGGTCTAATAAAATGTTCTAAA
CACCTAATTCATTCTTAAAATTAAACAGAGTGGGAAGTCGTTGATTGCAA
TTTTTTTATCTGATACAACTAAATCATACCAAGGTGAATTTCGACGAACA
CAAGTTGTCTTGGAATTTGAATGTACAATATTGCAAATCCTCAACAATAA
TAATCCCAACACTGGAAGGTTTGTCAAAACGGATATCGAACTCTGGGATA
TTTCCAGAAATGCTGACTATGAGTCATCTTGGACTGCCCTATGA
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