EMLSAG00000001888, EMLSAG00000001888-684654 (gene) Lepeophtheirus salmonis

Overview
NameEMLSAG00000001888
Unique NameEMLSAG00000001888-684654
Typegene
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Homology
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BLAST of EMLSAG00000001888 vs. GO
Match: - (symbol:RABL5 "Uncharacterized protein" species:9615 "Canis lupus familiaris" [GO:0005525 "GTP binding" evidence=IEA] [GO:0007264 "small GTPase mediated signal transduction" evidence=IEA] InterPro:IPR001806 Pfam:PF00071 GO:GO:0005525 InterPro:IPR027417 SUPFAM:SSF52540 GO:GO:0007264 GeneTree:ENSGT00390000013187 OMA:LQDTQCL TreeFam:TF313208 EMBL:AAEX03004261 Ensembl:ENSCAFT00000021897 Uniprot:F6V8Z0)

HSP 1 Score: 45.0542 bits (105), Expect = 1.774e-5
Identity = 23/89 (25.84%), Postives = 47/89 (52.81%), Query Frame = 0 
Query:    2 LELFHKQFKTIQ--TDSQCLVLTLSNKNDNLSMKNRGFKLPSQFNRITQIDVNLNEEGNKFRTEFNSFLSELLNNITDKRDQEEINIMN 88
            +E+++  F   Q   D+QCL++            N    LP+  N++  +  NL ++    R EF  +L  ++N++++ RD+EE++I+ 
Sbjct:  159 IEMWYSCFVQQQFLQDTQCLLIAHHKPGSGSDKGNP--SLPTPLNKLKLVHSNLEDDPEDIRLEFIKYLKSIINSVSESRDREEMSIIT 245
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BLAST of EMLSAG00000001888 vs. GO
Match: - (symbol:RABL5 "Uncharacterized protein" species:9823 "Sus scrofa" [GO:0005525 "GTP binding" evidence=IEA] [GO:0007264 "small GTPase mediated signal transduction" evidence=IEA] InterPro:IPR001806 Pfam:PF00071 GO:GO:0005525 InterPro:IPR027417 SUPFAM:SSF52540 GO:GO:0007264 KO:K07935 GeneTree:ENSGT00390000013187 OMA:LQDTQCL OrthoDB:EOG7FBRJZ TreeFam:TF313208 EMBL:FP102957 RefSeq:XP_003124428.1 Ensembl:ENSSSCT00000008420 GeneID:100519188 KEGG:ssc:100519188 Uniprot:F1RKG2)

HSP 1 Score: 41.5874 bits (96), Expect = 1.720e-4
Identity = 22/88 (25.00%), Postives = 46/88 (52.27%), Query Frame = 0 
Query:    2 LELFHKQFKTIQ--TDSQCLVLTLSNKNDNLSMKNRGFKLPSQFNRITQIDVNLNEEGNKFRTEFNSFLSELLNNITDKRDQEEINIM 87
            +E+++  F   Q   D+QCL++            N     P   N++  +  NL ++  + R EF  +L  ++N++++ RD+EE++I+
Sbjct:   99 IEMWYSCFVQQQFLQDTQCLLIAHHKPGSGSDKGNPTLSPP--LNKLKLVHSNLEDDPEEMRMEFIKYLRSIINSVSESRDREEMSII 184
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BLAST of EMLSAG00000001888 vs. GO
Match: - (symbol:RABL5 "Rab-like protein 5" species:9606 "Homo sapiens" [GO:0005525 "GTP binding" evidence=IEA] [GO:0007264 "small GTPase mediated signal transduction" evidence=IEA] InterPro:IPR001806 Pfam:PF00071 GO:GO:0005525 InterPro:IPR027417 SUPFAM:SSF52540 GO:GO:0007264 EMBL:CH471197 EMBL:AC006329 CTD:64792 eggNOG:NOG87073 HOGENOM:HOG000232131 HOVERGEN:HBG083943 KO:K07935 OMA:LQDTQCL OrthoDB:EOG7FBRJZ TreeFam:TF313208 EMBL:AK023287 EMBL:AK024179 EMBL:AK298888 EMBL:BC004522 EMBL:BC009823 EMBL:BC038668 EMBL:AL157469 RefSeq:NP_001124292.1 RefSeq:NP_001124293.1 RefSeq:NP_001124294.1 RefSeq:NP_001274454.1 RefSeq:NP_001274455.1 RefSeq:NP_073614.1 UniGene:Hs.389104 ProteinModelPortal:Q9H7X7 BioGrid:122300 PhosphoSite:Q9H7X7 DMDM:74733725 PaxDb:Q9H7X7 PRIDE:Q9H7X7 DNASU:64792 Ensembl:ENST00000315322 Ensembl:ENST00000422177 Ensembl:ENST00000437644 Ensembl:ENST00000498704 Ensembl:ENST00000517481 GeneID:64792 KEGG:hsa:64792 UCSC:uc003uyl.3 UCSC:uc003uym.3 GeneCards:GC07M100956 HGNC:HGNC:21895 HPA:HPA042930 neXtProt:NX_Q9H7X7 PharmGKB:PA134871769 InParanoid:Q9H7X7 ChiTaRS:RABL5 GenomeRNAi:64792 NextBio:66854 PRO:PR:Q9H7X7 ArrayExpress:Q9H7X7 Bgee:Q9H7X7 CleanEx:HS_RABL5 Genevestigator:Q9H7X7 Uniprot:Q9H7X7)

HSP 1 Score: 40.817 bits (94), Expect = 2.794e-4
Identity = 23/90 (25.56%), Postives = 51/90 (56.67%), Query Frame = 0 
Query:    2 LELFHKQF---KTIQTDSQCLVLTLSNKNDNLSMKNRG-FKLPSQFNRITQIDVNLNEEGNKFRTEFNSFLSELLNNITDKRDQEEINIM 87
            +E+++  F    ++Q D+QC+++         S  ++G   L    N++  +  NL ++  + R EF  +L  ++N++++ RD+EE++IM
Sbjct:   99 MEMWYSCFVQQPSLQ-DTQCMLIAHHKPG---SGDDKGSLSLSPPLNKLKLVHSNLEDDPEEIRMEFIKYLKSIINSMSESRDREEMSIM 184
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BLAST of EMLSAG00000001888 vs. GO
Match: - (symbol:RABL5 "Rab-like protein 5" species:9913 "Bos taurus" [GO:0005525 "GTP binding" evidence=IEA] [GO:0007264 "small GTPase mediated signal transduction" evidence=IEA] InterPro:IPR001806 Pfam:PF00071 GO:GO:0005525 InterPro:IPR027417 SUPFAM:SSF52540 GO:GO:0007264 EMBL:BT020926 EMBL:BC102614 RefSeq:NP_001015612.1 UniGene:Bt.48915 ProteinModelPortal:Q5E9J4 PRIDE:Q5E9J4 GeneID:516107 KEGG:bta:516107 CTD:64792 eggNOG:NOG87073 HOGENOM:HOG000232131 HOVERGEN:HBG083943 InParanoid:Q5E9J4 KO:K07935 NextBio:20872139 Uniprot:Q5E9J4)

HSP 1 Score: 39.6614 bits (91), Expect = 8.106e-4
Identity = 18/72 (25.00%), Postives = 38/72 (52.78%), Query Frame = 0 
Query:   16 SQCLVLTLSNKNDNLSMKNRGFKLPSQFNRITQIDVNLNEEGNKFRTEFNSFLSELLNNITDKRDQEEINIM 87
            +QCL++            N     P   N++  +  NL ++  + R EF  +L  ++N++++ RD+EE++I+
Sbjct:  115 TQCLLIAHHKPGSGSDKDNPALAPP--LNKLKLVHSNLEDDPEEIRMEFIKYLRSIINSVSESRDREEMSII 184
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BLAST of EMLSAG00000001888 vs. C. finmarchicus
Match: gi|592879895|gb|GAXK01078006.1| (TSA: Calanus finmarchicus comp1133658_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 78.9518 bits (193), Expect = 3.384e-18
Identity = 43/91 (47.25%), Postives = 60/91 (65.93%), Query Frame = 0 
Query:    2 LELFHKQFKTIQTDSQ--CLVLT--LSNKNDNLSMKNRGFKLPSQFNRITQIDVNLNEEGNKFRTEFNSFLSELLNNITDKRDQEEINIMN 88
            LE FH+ F    T S+  C+V    LS     LS + RG KLP+ F+RI Q++VNL EEGN+ RT+F +FL+ ++  ++  RDQEEINI+N
Sbjct:  110 LETFHQAFVRGPTVSENSCVVFAHFLS-----LSRERRGAKLPTTFSRIPQLEVNLEEEGNRLRTDFQTFLATVIAGLSHNRDQEEINIIN 367
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BLAST of EMLSAG00000001888 vs. C. finmarchicus
Match: gi|592871088|gb|GAXK01086474.1| (TSA: Calanus finmarchicus comp479558_c0_seq2 transcribed RNA sequence)

HSP 1 Score: 27.335 bits (59), Expect = 7.378e+0
Identity = 19/81 (23.46%), Postives = 42/81 (51.85%), Query Frame = 0 
Query:    2 LELFHKQFKTIQTDSQCLVLTLSNK----NDNLSMKNRGFKLPSQFNRITQIDVNLNEEGNKFRTEFNSFLSELLNNITDK 78
            L+ F +Q   ++   +  +L + NK     D +  K++G+KL SQFN  + ++ +  ++ +         +S++ N+I D+
Sbjct:  204 LQDFWEQLNRLKGPDKIPLLLVGNKCDLEEDRVVGKDQGYKLASQFNNCSFMETSARDKNS---------VSDMFNDIVDQ 419
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BLAST of EMLSAG00000001888 vs. C. finmarchicus
Match: gi|592871089|gb|GAXK01086473.1| (TSA: Calanus finmarchicus comp479558_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 26.9498 bits (58), Expect = 9.299e+0
Identity = 19/81 (23.46%), Postives = 42/81 (51.85%), Query Frame = 0 
Query:    2 LELFHKQFKTIQTDSQCLVLTLSNK----NDNLSMKNRGFKLPSQFNRITQIDVNLNEEGNKFRTEFNSFLSELLNNITDK 78
            L+ F +Q   ++   +  +L + NK     D +  K++G+KL SQFN  + ++ +  ++ +         +S++ N+I D+
Sbjct:  204 LQDFWEQLNRLKGPDKIPLLLVGNKCDLEEDRVVGKDQGYKLASQFNNCSFMETSARDKNS---------VSDMFNDIVDQ 419
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BLAST of EMLSAG00000001888 vs. L. salmonis peptides
Match: EMLSAP00000001888 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1324:942:1778:1 gene:EMLSAG00000001888 transcript:EMLSAT00000001888 description:"maker-LSalAtl2s1324-augustus-gene-0.13")

HSP 1 Score: 176.407 bits (446), Expect = 1.989e-58
Identity = 89/89 (100.00%), Postives = 89/89 (100.00%), Query Frame = 0 
Query:    1 MLELFHKQFKTIQTDSQCLVLTLSNKNDNLSMKNRGFKLPSQFNRITQIDVNLNEEGNKFRTEFNSFLSELLNNITDKRDQEEINIMNI 89
            MLELFHKQFKTIQTDSQCLVLTLSNKNDNLSMKNRGFKLPSQFNRITQIDVNLNEEGNKFRTEFNSFLSELLNNITDKRDQEEINIMNI
Sbjct:    1 MLELFHKQFKTIQTDSQCLVLTLSNKNDNLSMKNRGFKLPSQFNRITQIDVNLNEEGNKFRTEFNSFLSELLNNITDKRDQEEINIMNI 89
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BLAST of EMLSAG00000001888 vs. L. salmonis peptides
Match: EMLSAP00000001887 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1324:9365:9703:1 gene:EMLSAG00000001887 transcript:EMLSAT00000001887 description:"maker-LSalAtl2s1324-snap-gene-0.18")

HSP 1 Score: 108.997 bits (271), Expect = 8.199e-32
Identity = 59/92 (64.13%), Postives = 67/92 (72.83%), Query Frame = 0 
Query:    1 MLELFHKQFKTIQTDSQCLVLTLSNKNDNLSMKNRGFK-----------------------LPSQFNRITQIDVNLNEEGNKFRTEFNSFLS 69
            MLELFHKQFKTIQTDSQCLVLTLSNKNDNLS++NRGF+                       L SQFN+I+QID++L+EEG KFRTEFNSFLS
Sbjct:    1 MLELFHKQFKTIQTDSQCLVLTLSNKNDNLSIQNRGFRRSKSLKSLLFILNNLITFVFSSLLASQFNQISQIDLDLHEEGIKFRTEFNSFLS 92
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BLAST of EMLSAG00000001888 vs. Select Arthropod Genomes
Match: gb|KFM79720.1| (Rab-like protein 5, partial [Stegodyphus mimosarum])

HSP 1 Score: 70.8626 bits (172), Expect = 5.831e-16
Identity = 39/89 (43.82%), Postives = 58/89 (65.17%), Query Frame = 0 
Query:    2 LELFHKQFKTIQT--DSQCLVLTLSNKNDNLSMKNRGFKLPSQFNRITQIDVNLNEEGNKFRTEFNSFLSELLNNITDKRDQEEINIMN 88
            +++++  F   Q   DSQC+V    ++  NL  + R  +L S F+RIT I  N+ E GN  R EFNSFL  LL+NI+++RDQEE++I+N
Sbjct:  101 MDMWYANFVQAQGLKDSQCIVFC--HRKPNLP-ETRSSELSSLFSRITWIQTNIEENGNALRREFNSFLQRLLSNISERRDQEELSILN 186
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BLAST of EMLSAG00000001888 vs. nr
Match: gi|675386823|gb|KFM79720.1| (Rab-like protein 5, partial [Stegodyphus mimosarum])

HSP 1 Score: 70.8626 bits (172), Expect = 2.853e-13
Identity = 39/89 (43.82%), Postives = 58/89 (65.17%), Query Frame = 0 
Query:    2 LELFHKQFKTIQT--DSQCLVLTLSNKNDNLSMKNRGFKLPSQFNRITQIDVNLNEEGNKFRTEFNSFLSELLNNITDKRDQEEINIMN 88
            +++++  F   Q   DSQC+V    ++  NL  + R  +L S F+RIT I  N+ E GN  R EFNSFL  LL+NI+++RDQEE++I+N
Sbjct:  101 MDMWYANFVQAQGLKDSQCIVFC--HRKPNLP-ETRSSELSSLFSRITWIQTNIEENGNALRREFNSFLQRLLSNISERRDQEELSILN 186
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BLAST of EMLSAG00000001888 vs. nr
Match: gi|1009558461|ref|XP_015913935.1| (PREDICTED: intraflagellar transport protein 22 homolog isoform X2 [Parasteatoda tepidariorum])

HSP 1 Score: 69.3218 bits (168), Expect = 5.253e-13
Identity = 37/89 (41.57%), Postives = 55/89 (61.80%), Query Frame = 0 
Query:    2 LELFHKQFKTIQT--DSQCLVLTLSNKNDNLSMKNRGFKLPSQFNRITQIDVNLNEEGNKFRTEFNSFLSELLNNITDKRDQEEINIMN 88
            +++++  F   Q   DSQC+V      N +     R  +L S F+RIT +  N+ E GN  R EFNSFL  LL+NI+++RDQEE++I+N
Sbjct:   71 MDMWYANFVQTQGLKDSQCIVFCHRKPNTH---DTRSSELSSLFSRITWVQTNIEENGNSLRREFNSFLQRLLSNISERRDQEELSILN 156
[Close]
BLAST of EMLSAG00000001888 vs. nr
Match: gi|1009558458|ref|XP_015913934.1| (PREDICTED: intraflagellar transport protein 22 homolog isoform X1 [Parasteatoda tepidariorum])

HSP 1 Score: 69.3218 bits (168), Expect = 1.043e-12
Identity = 37/89 (41.57%), Postives = 55/89 (61.80%), Query Frame = 0 
Query:    2 LELFHKQFKTIQT--DSQCLVLTLSNKNDNLSMKNRGFKLPSQFNRITQIDVNLNEEGNKFRTEFNSFLSELLNNITDKRDQEEINIMN 88
            +++++  F   Q   DSQC+V      N   +   R  +L S F+RIT +  N+ E GN  R EFNSFL  LL+NI+++RDQEE++I+N
Sbjct:  101 MDMWYANFVQTQGLKDSQCIVFCHRKPN---THDTRSSELSSLFSRITWVQTNIEENGNSLRREFNSFLQRLLSNISERRDQEELSILN 186
[Close]
BLAST of EMLSAG00000001888 vs. nr
Match: gi|1005473404|ref|XP_015773532.1| (PREDICTED: intraflagellar transport protein 22 homolog [Acropora digitifera])

HSP 1 Score: 67.3958 bits (163), Expect = 1.193e-11
Identity = 37/89 (41.57%), Postives = 55/89 (61.80%), Query Frame = 0 
Query:    2 LELFHKQFKTIQT--DSQCLVLTLSNKNDNLSMKNRGFKLPSQFNRITQIDVNLNEEGNKFRTEFNSFLSELLNNITDKRDQEEINIMN 88
            LE ++ QF   Q   DSQC+V      +     K+    LPS  +R+T +  NL+EE    R EF++FL+++++N TDKRDQEE++IMN
Sbjct:  142 LETWYTQFVQSQGLKDSQCIVFAHHQPSAPDLTKSH---LPSSMSRVTCVQTNLDEEAEIVRDEFHNFLAKVISNWTDKRDQEELSIMN 227
[Close]
BLAST of EMLSAG00000001888 vs. nr
Match: gi|919085315|ref|XP_013379823.1| (PREDICTED: intraflagellar transport protein 22 homolog [Lingula anatina])

HSP 1 Score: 65.855 bits (159), Expect = 2.650e-11
Identity = 33/90 (36.67%), Postives = 55/90 (61.11%), Query Frame = 0 
Query:    2 LELFHKQFKTIQT--DSQCLVLTLSNKNDNLSMKNRGFKLPSQ-FNRITQIDVNLNEEGNKFRTEFNSFLSELLNNITDKRDQEEINIMN 88
            LE+++  F ++    D+QCL+      + +  +   G   P Q F++I+ ++ NL+++G   RTEF  FLS LLN + D RD+EE++IMN
Sbjct:  101 LEMWYTHFVSVPGLRDTQCLLFAHKKGSSSGFLGQSGGTGPPQAFSKISVVNTNLDDDGENVRTEFEKFLSGLLNAMHDSRDKEELSIMN 190
[Close]
BLAST of EMLSAG00000001888 vs. nr
Match: gi|156380854|ref|XP_001631982.1| (predicted protein [Nematostella vectensis] >gi|156219031|gb|EDO39919.1| predicted protein [Nematostella vectensis])

HSP 1 Score: 64.3142 bits (155), Expect = 8.044e-11
Identity = 32/89 (35.96%), Postives = 56/89 (62.92%), Query Frame = 0 
Query:    2 LELFHKQFKTIQ--TDSQCLVLTLSNKNDNLSMKNRGFKLPSQFNRITQIDVNLNEEGNKFRTEFNSFLSELLNNITDKRDQEEINIMN 88
            LE ++ QF   Q   DSQC+V      +  +  +    ++P   +++T +  NL+E+ +  R +F +FL+++L+N+TDKRDQEE++IMN
Sbjct:  102 LETWYTQFVQTQMLKDSQCIVFA---HHKPMGTERTRTQIPPSLSKVTCVHTNLDEDPDSVREDFKNFLAKVLSNLTDKRDQEELSIMN 187
[Close]
BLAST of EMLSAG00000001888 vs. nr
Match: gi|291232084|ref|XP_002736022.1| (PREDICTED: rab-like protein 5-like [Saccoglossus kowalevskii])

HSP 1 Score: 62.7734 bits (151), Expect = 3.099e-10
Identity = 33/89 (37.08%), Postives = 52/89 (58.43%), Query Frame = 0 
Query:    2 LELFHKQFKTIQT--DSQCLVLTLSNKNDNLSMKNRGFKLPSQFNRITQIDVNLNEEGNKFRTEFNSFLSELLNNITDKRDQEEINIMN 88
            LE+++  F   Q   DSQC++      N +   K    +L S   ++TQ+  NL E+ +  RT F ++LS+L   +TDKRDQEE++I+N
Sbjct:  100 LEMWYSNFVVGQGLRDSQCIIFAHQKPNSSSHAK---VQLGSTMAKVTQVSTNLEEDHDGVRTHFANYLSKLFTAMTDKRDQEELSIIN 185
[Close]
BLAST of EMLSAG00000001888 vs. nr
Match: gi|999988799|gb|KXJ27867.1| (Intraflagellar transport protein 22-like [Exaiptasia pallida])

HSP 1 Score: 62.3882 bits (150), Expect = 7.113e-10
Identity = 32/89 (35.96%), Postives = 55/89 (61.80%), Query Frame = 0 
Query:    2 LELFHKQFKTIQT--DSQCLVLTLSNKNDNLSMKNRGFKLPSQFNRITQIDVNLNEEGNKFRTEFNSFLSELLNNITDKRDQEEINIMN 88
            LE ++ QF   Q   DSQCL+      +  ++ +    ++P   +++  +  NL+E+ +  R EF +FL ++L+N+TDKRDQEE++IMN
Sbjct:  126 LETWYTQFVQEQWLRDSQCLIFA---HHKPMAPERVRTQVPQTLSKVPCVHTNLDEDPDSVREEFKNFLGQVLSNLTDKRDQEELSIMN 211
[Close]
BLAST of EMLSAG00000001888 vs. nr
Match: gi|999967110|gb|KXJ06284.1| (Intraflagellar transport protein 22-like [Exaiptasia pallida])

HSP 1 Score: 62.3882 bits (150), Expect = 7.688e-10
Identity = 32/89 (35.96%), Postives = 55/89 (61.80%), Query Frame = 0 
Query:    2 LELFHKQFKTIQT--DSQCLVLTLSNKNDNLSMKNRGFKLPSQFNRITQIDVNLNEEGNKFRTEFNSFLSELLNNITDKRDQEEINIMN 88
            LE ++ QF   Q   DSQCL+      +  ++ +    ++P   +++  +  NL+E+ +  R EF +FL ++L+N+TDKRDQEE++IMN
Sbjct:  128 LETWYTQFVQEQWLRDSQCLIFA---HHKPMAPERVRTQVPQTLSKVPCVHTNLDEDPDSVREEFKNFLGQVLSNLTDKRDQEELSIMN 213
[Close]
BLAST of EMLSAG00000001888 vs. nr
Match: gi|780109664|ref|XP_011676315.1| (PREDICTED: intraflagellar transport protein 22 homolog [Strongylocentrotus purpuratus])

HSP 1 Score: 60.8474 bits (146), Expect = 1.868e-9
Identity = 30/88 (34.09%), Postives = 54/88 (61.36%), Query Frame = 0 
Query:    2 LELFHKQFKTIQT--DSQCLVLTLSNKNDNLSMKNRGFKLPSQFNRITQIDVNLNEEGNKFRTEFNSFLSELLNNITDKRDQEEINIM 87
            L+ ++  F T Q   DSQC++      N + +++    ++PSQ  R+  +  NL EE ++ R +FN FLS++L  I+ ++DQEE++I+
Sbjct:  100 LDTWYNHFITQQGLKDSQCIIFGHHRPNTSQAVR---VQIPSQMTRVNHVQTNLEEESDQVRADFNLFLSKVLGAISKRQDQEELSII 184
[Close]
BLAST of EMLSAG00000001888 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold289_size220122-snap-gene-1.28 (protein:Tk01623 transcript:maker-scaffold289_size220122-snap-gene-1.28-mRNA-1 annotation:"rab-like protein 5")

HSP 1 Score: 77.411 bits (189), Expect = 1.124e-19
Identity = 40/91 (43.96%), Postives = 61/91 (67.03%), Query Frame = 0 
Query:    2 LELFHKQF--KTIQTDSQCLVLTL--SNKNDNLSMKNRGFKLPSQFNRITQIDVNLNEEGNKFRTEFNSFLSELLNNITDKRDQEEINIMN 88
            L+LFH +F  K    D+QC+V       K DN     RG KL +QFNRI Q++VN++EEGN+ R++FN+F++ LL N+ +  +QEE +I++
Sbjct:  102 LDLFHAEFVEKAGVADTQCVVFAYFRDGKGDN-----RGVKLSNQFNRIPQLEVNIDEEGNRLRSDFNTFIASLLANLANLNEQEEASIIS 187
The following BLAST results are available for this feature:
BLAST of EMLSAG00000001888 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO)
Total hits: 4
Match NameE-valueIdentityDescription
-1.774e-525.84symbol:RABL5 "Uncharacterized protein" species:961... [more]
-1.720e-425.00symbol:RABL5 "Uncharacterized protein" species:982... [more]
-2.794e-425.56symbol:RABL5 "Rab-like protein 5" species:9606 "Ho... [more]
-8.106e-425.00symbol:RABL5 "Rab-like protein 5" species:9913 "Bo... [more]
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BLAST of EMLSAG00000001888 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA)
Total hits: 3
Match NameE-valueIdentityDescription
gi|592879895|gb|GAXK01078006.1|3.384e-1847.25TSA: Calanus finmarchicus comp1133658_c0_seq1 tran... [more]
gi|592871088|gb|GAXK01086474.1|7.378e+023.46TSA: Calanus finmarchicus comp479558_c0_seq2 trans... [more]
gi|592871089|gb|GAXK01086473.1|9.299e+023.46TSA: Calanus finmarchicus comp479558_c0_seq1 trans... [more]
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BLAST of EMLSAG00000001888 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self)
Total hits: 2
Match NameE-valueIdentityDescription
EMLSAP000000018881.989e-58100.00pep:novel supercontig:LSalAtl2s:LSalAtl2s1324:942:... [more]
EMLSAP000000018878.199e-3264.13pep:novel supercontig:LSalAtl2s:LSalAtl2s1324:9365... [more]
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BLAST of EMLSAG00000001888 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000001888 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods)
Total hits: 1
Match NameE-valueIdentityDescription
gb|KFM79720.1|5.831e-1643.82Rab-like protein 5, partial [Stegodyphus mimosarum... [more]
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BLAST of EMLSAG00000001888 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017))
Total hits: 12
Match NameE-valueIdentityDescription
gi|675386823|gb|KFM79720.1|2.853e-1343.82Rab-like protein 5, partial [Stegodyphus mimosarum... [more]
gi|1009558461|ref|XP_015913935.1|5.253e-1341.57PREDICTED: intraflagellar transport protein 22 hom... [more]
gi|1009558458|ref|XP_015913934.1|1.043e-1241.57PREDICTED: intraflagellar transport protein 22 hom... [more]
gi|1005473404|ref|XP_015773532.1|1.193e-1141.57PREDICTED: intraflagellar transport protein 22 hom... [more]
gi|919085315|ref|XP_013379823.1|2.650e-1136.67PREDICTED: intraflagellar transport protein 22 hom... [more]
gi|156380854|ref|XP_001631982.1|8.044e-1135.96predicted protein [Nematostella vectensis] >gi|156... [more]
gi|291232084|ref|XP_002736022.1|3.099e-1037.08PREDICTED: rab-like protein 5-like [Saccoglossus k... [more]
gi|999988799|gb|KXJ27867.1|7.113e-1035.96Intraflagellar transport protein 22-like [Exaiptas... [more]
gi|999967110|gb|KXJ06284.1|7.688e-1035.96Intraflagellar transport protein 22-like [Exaiptas... [more]
gi|780109664|ref|XP_011676315.1|1.868e-934.09PREDICTED: intraflagellar transport protein 22 hom... [more]

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BLAST of EMLSAG00000001888 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins)
Total hits: 1
Match NameE-valueIdentityDescription
maker-scaffold289_size220122-snap-gene-1.281.124e-1943.96protein:Tk01623 transcript:maker-scaffold289_size2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1324supercontigLSalAtl2s1324:942..1778 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Blast vs. GO2014-04-02
TblastN vs C. finmarchicus TSA2014-05-09
Blastp vs. self2014-05-10
Blastp vs. SwissProt2017-02-10
Blastp vs. Selected Arthropods2017-02-20
Blastp vs. NR (2/2017)2017-02-20
Blastp vs. Tigriopus kingsejongensis proteins2018-04-18
Properties
Property NameValue
Logic nameensemblgenomes
Descriptionmaker-LSalAtl2s1324-augustus-gene-0.13
Biotypeprotein_coding
EvidenceIEA
NoteRab-like protein 5, partial [Stegodyphus mimosarum]
Cross References
External references for this gene
DatabaseAccession
Ensembl Metazoa (gene)EMLSAG00000001888 (primary cross-reference)
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
EMLSAT00000001888EMLSAT00000001888-697735Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at LSalAtl2s1324:942..1778+

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAG00000001888-684654 ID=EMLSAG00000001888-684654|Name=EMLSAG00000001888|organism=Lepeophtheirus salmonis|type=gene|length=837bp|location=Sequence derived from alignment at LSalAtl2s1324:942..1778+ (Lepeophtheirus salmonis)
GTTTTATTTTGGAAGTAATTGGAATTACCTGCTTTCTACCAGTAGCTAAA
TATATTTTACCTTTATTATGTTTTGATTATTATCAACTTTTAACTCTGTC
TACATTCTACAAGCTATGTACAAGTTGAAAATCATATTTGTCGGACCGGA
AGAGGTAAAATAAAACATTCTAATCACTTAATTTCTTCTTAAAATTCAAC
AGGGTGGGAAGTCTGTCATTGCCAATTTTTTATCCGATACGACTGAATCC
TCCCAAGGTGAATATCGACCAACAAAAGTTGTAAGAATCTTGGAATTTGA
ATGTCAAAAATTGCAAATCCTCAACAATAACAATGCCAACTCTGGAAGGT
TTGTCAAAACGGATATCGAACTCTGGGATATTTCYGGAAATACAGACTAT
GAGTCATCATGGCCTGCCCTATGTCAAGACGTCCATGGTATTGTATTTGT
CTATAATCCAAATAAAGGAAGCAACCAAATAAAGATGTTGGAGCTGTTTC
ACAAACAGTTTAAAACTATTCAAACGGATTCACAATGTTTAGTTCTCACT
TTATCTAACAAAAATGATAATTTATCGATGAAGAATCGAGGCTTCAAGCT
TCGTAAGTGACTTAAAAGTTTATTTTTTTGTTTGCATATTATATTTAAAT
ACTTAATTAATTTACTTTCGTATTTTCTTCCCTTATAGCCTCACAATTTA
ATCGAATTACACAAATTGATGTCAATTTAAATGAAGAAGGGAACAAGTTC
AGAACTGAATTCAATTCATTTTTATCTGAGCTTTTAAAYAACATCACCGA
CAAGAGAGATCAAGAAGAAATTAATATCATGAATATA
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