EMLSAG00000002064, EMLSAG00000002064-684830 (gene) Lepeophtheirus salmonis

Overview
NameEMLSAG00000002064
Unique NameEMLSAG00000002064-684830
Typegene
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Homology
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BLAST of EMLSAG00000002064 vs. L. salmonis peptides
Match: EMLSAP00000002064 (pep:novel supercontig:LSalAtl2s:LSalAtl2s137:168899:171790:1 gene:EMLSAG00000002064 transcript:EMLSAT00000002064 description:"maker-LSalAtl2s137-snap-gene-1.7")

HSP 1 Score: 840.106 bits (2169), Expect = 0.000e+0
Identity = 412/412 (100.00%), Postives = 412/412 (100.00%), Query Frame = 0 
Query:    1 MLFRMESVTGECAKDFRDAILAYHFEELSFAEASRIYSVTQYRLKKAIKKLYSINEQRKEMNRSPLIENCDRRQVSRWATKYARYKSESRSSCSPYEIKYAIQGLVTGEXTEDEAILEYGLNKVSYWPTINMILSRFKIDSLTKARRLYKQNELSLKEINDAIDLCEFKSQSDYTRIISDKEAMIFAEVKFNQLMLHLSSTELDDFFKAFEHVTKIMTSKSSDEYIFQLLHDLDLKVNLTKSSSTTELNSNFSQVCSVSHPNCISKKKIAKYFKELVSLSTERGNDMNLDSSKKDIEIKKIKEDCILEEKCMSDENEKWEIALEIANRELELEECFQRIIENLTNSSDPIESALQRNQLNDLKFASQYLSSSLVGLEDQEKELYVTYLTNHDAIKSIPRNGVFQGDKMDWLS 412
            MLFRMESVTGECAKDFRDAILAYHFEELSFAEASRIYSVTQYRLKKAIKKLYSINEQRKEMNRSPLIENCDRRQVSRWATKYARYKSESRSSCSPYEIKYAIQGLVTGEXTEDEAILEYGLNKVSYWPTINMILSRFKIDSLTKARRLYKQNELSLKEINDAIDLCEFKSQSDYTRIISDKEAMIFAEVKFNQLMLHLSSTELDDFFKAFEHVTKIMTSKSSDEYIFQLLHDLDLKVNLTKSSSTTELNSNFSQVCSVSHPNCISKKKIAKYFKELVSLSTERGNDMNLDSSKKDIEIKKIKEDCILEEKCMSDENEKWEIALEIANRELELEECFQRIIENLTNSSDPIESALQRNQLNDLKFASQYLSSSLVGLEDQEKELYVTYLTNHDAIKSIPRNGVFQGDKMDWLS
Sbjct:    1 MLFRMESVTGECAKDFRDAILAYHFEELSFAEASRIYSVTQYRLKKAIKKLYSINEQRKEMNRSPLIENCDRRQVSRWATKYARYKSESRSSCSPYEIKYAIQGLVTGEXTEDEAILEYGLNKVSYWPTINMILSRFKIDSLTKARRLYKQNELSLKEINDAIDLCEFKSQSDYTRIISDKEAMIFAEVKFNQLMLHLSSTELDDFFKAFEHVTKIMTSKSSDEYIFQLLHDLDLKVNLTKSSSTTELNSNFSQVCSVSHPNCISKKKIAKYFKELVSLSTERGNDMNLDSSKKDIEIKKIKEDCILEEKCMSDENEKWEIALEIANRELELEECFQRIIENLTNSSDPIESALQRNQLNDLKFASQYLSSSLVGLEDQEKELYVTYLTNHDAIKSIPRNGVFQGDKMDWLS 412
The following BLAST results are available for this feature:
BLAST of EMLSAG00000002064 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000002064 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000002064 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self)
Total hits: 1
Match NameE-valueIdentityDescription
EMLSAP000000020640.000e+0100.00pep:novel supercontig:LSalAtl2s:LSalAtl2s137:16889... [more]
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BLAST of EMLSAG00000002064 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000002064 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000002064 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017))
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000002064 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s137supercontigLSalAtl2s137:168899..171790 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Blast vs. GO2014-04-02
TblastN vs C. finmarchicus TSA2014-05-09
Blastp vs. self2014-05-10
Blastp vs. SwissProt2017-02-10
Blastp vs. Selected Arthropods2017-02-20
Blastp vs. NR (2/2017)2017-02-20
Blastp vs. Tigriopus kingsejongensis proteins2018-04-18
Properties
Property NameValue
Logic nameensemblgenomes
Descriptionmaker-LSalAtl2s137-snap-gene-1.7
Biotypeprotein_coding
EvidenceIEA
NoteHypothetical protein
Cross References
External references for this gene
DatabaseAccession
Ensembl Metazoa (gene)EMLSAG00000002064 (primary cross-reference)
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
EMLSAT00000002064EMLSAT00000002064-697911Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at LSalAtl2s137:168899..171790+

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAG00000002064-684830 ID=EMLSAG00000002064-684830|Name=EMLSAG00000002064|organism=Lepeophtheirus salmonis|type=gene|length=2892bp|location=Sequence derived from alignment at LSalAtl2s137:168899..171790+ (Lepeophtheirus salmonis)
ATGCTAGTAAAATATTTTTTTATCTGAATCCTCCATTCACGGCGTGCTAT
AAAAACATTACTGTCAGCTGTTTGTTTGTATCCTTAGATCTATTTCCTAT
TCTTGATTTTAAATATATACATTAATTCATAGTGATACATACATCATCGA
GCGGTTTATAAGGGAAATGTGAGTAAAAAGTTAGATGGATTATCCATTAA
TTGTACAAATATCATATCTTTATTTATTATTTTATTCATAGAATACAGTT
GATTAAGGCTCTTATTTTTGTACATAACAATCCCTACCATTAGAATCATT
TTTTGAAACAACCTTACAAAATCATTTTTTAACAACTTACACAAGCTGTA
ATAGAGTAATATTATGAATTGTTGAGTTTTACTAAATTTTGCAACAAATG
TATGGCTACGCTTTTAATGAAAGATGACATTAATACAGAAGACTTAGTTA
ATGCATATGTTAAGTTTTGTAGTCCAATGACGTCACCAGATACATTTAAG
TCGACTGGCCAGGTAATATTTACAGAAAATAGATATATATTTTATCAAGG
AAAACTAAAGAGGTTGTAGTCCTTGATTTTCACAATTTTATGACAAAGAT
AAGAAGTATTAAATTAATTATGAGATTGACATTTTATAATGAATACTATA
AAGATATTTTGATTTGCTTGCCTTAATCGTCGTTGCATTAAAAAAATCTC
TTGAGAGTTTTTTGAGCTCTTAAGTTGAGATAAATATTTTTTTTTCTCCA
TCATTATTTAGGACTAAATAATCTTATTTAAATATCTTTATATTATCAAT
GTAATATTTATATTAATTAGGTGAAAATTATTCATAATCATAAAATTAAA
TACTCATTTTATTATTTCAGTTCAGAATGGAGTCTGTAACGGGAGAGTGT
GCAAAAGATTTTAGGGATGCAATTCTTGCATACCATTTCGAAGAATTAAG
TTTTGCTGAGGCATCAAGGATATATTCAGTTACACAATATAGATTAAAGA
AAGCTATAAAAAAACTATATAGTATAAATGAACAACGGAAGGAAATGAAT
CGAAGCCCCTTGATTGAGAATTGCGATAGAAGACAAGTTTCACGCTGGGC
AACCAAATATGCTAGATATAAGAGTGAATCCAGGAGTTCTTGTTCTCCTT
ATGAAATAAAATATGCAATTCAAGGCTTGGTTACTGGAGAGGKAACAGAA
GATGAAGCCATTCTAGAATATGGGCTAAATAAAGTTTCTTATTGGCCCAC
AATAAATATGATCCTTTCTAGATTCAAAATTGATTCATTGACTAAAGCTC
GTCGGCTTTACAAGCAAAATGAACTATCTTTGAAAGAAATAAATGATGCA
ATTGACCTATGTGAATTTAAAAGTCAGAGTGATTATACAAGAATAATTTC
TGATAAGGAGGCAATGATATTCGCTGAGGTCAAGTTCAATCAACTTATGC
TACATCTATCTTCAACTGAGCTTGATGATTTTTTTAAAGCTTTTGAACAT
GTTACGAAAATTATGACATCTAAATCAAGTGACGAATATATTTTTCAATT
ACTCCATGACCTTGACTTAAAAGTTAATCTAACTAAGTCTTCTTCAACTA
CAGAGCTGAATTCAAATTTTTCTCAAGTTTGTTCTGTATCCCATCCGAAT
TGCATTAGCAAAAAGAAAATTGCGAAATATTTTAAGGAACTTGTCAGCCT
TTCCACAGAGAGAGGCAATGATATGAATCTTGACTCTTCTAAAAAGGACA
TTGAAATAAAAAAAATTAAGGAAGATTGTATTTTAGAAGAAAAATGTATG
TCAGATGAAAATGAGAAGTGGGAAATAGCCTTGGAGATTGCTAATAGAGA
GCTAGAACTAGAAGAGTGTTTTCAAAGGATAATTGAAAACCTAACTAATT
CTTCAGATCCTATTGAGTCTGCTTTACAACGAAATCAATTGAACGATTTG
AAGTTTGCCAGTCAGTATTTAAGTTCTTCTTTAGTCGGTCTAGAGGATCA
AGAAAAAGAGTTATATGTGACTTATTTGACAAACCACGATGCTATTAAGT
CTATTCCGAGAAATGGTGTTTTTCAAGGTGATAAGATGGATTGGCTTTCC
TAAAAAAGTGCTGAAGATAACGTTTGTTCTATTTTTATTTACTTGAACTT
GTAACCAAATTTTTTTTTGTAGTATACATCCCAATATTTCATTTTAAAGC
AATTACTTACATTTCATTGATATCATAAGGTGCTTTGGAAACTTTGAATA
AGTTTTAAAAATTACACGATTATTTACTTCTTGAAGAGAAATCAATTATG
AATACTTTATAGCGTATGCCACTATATACATACCCTCAATACTTTCTTAT
TTTATAAAATTATTTTGACGGCCTTTGCATTCAATAACTAAATAAATAAT
TCCACAATTATTATACATTCATTGAATCTATTATTCAAATATTGTACATA
TATTTATAATAATTACGTAAATATTTAGCAAATCCATGTATTTTATATTT
GACAATGAAAACATCATTTCATCCAAACGATCTTTAAATTGTTATACTTT
TGGAATCATTTACATATGGCAGAATTACATACATACCGTATTTTTTCAAC
AACATAAAAATATCTTGAATATCTGACATCAGAGAAGGTTTCTAGTCAAA
ACTATTTATAAAACTAAATTCATGATCACTCGACGACTGTTAATTTCAAT
GTAGCTTGTTCACAATAAGTAGAATGTATTAGTGCCCTTTTAGATGAGAT
TAGTTAACTAAATCAAGGAAGCTGGCTTGCTGTCCAAAAAGATGATAATG
TTCATTATTTCAATTTCATGATTATGGTAGATGGTGTTAAGGTTTTTTTC
TTGAGTTCAGTATAAAAAAGTTCGTGTATGCGAATATGTTTC
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