EMLSAG00000002324, EMLSAG00000002324-685090 (gene) Lepeophtheirus salmonis

Overview
NameEMLSAG00000002324
Unique NameEMLSAG00000002324-685090
Typegene
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Homology
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BLAST of EMLSAG00000002324 vs. L. salmonis peptides
Match: EMLSAP00000002324 (pep:novel supercontig:LSalAtl2s:LSalAtl2s143:557527:559384:-1 gene:EMLSAG00000002324 transcript:EMLSAT00000002324 description:"maker-LSalAtl2s143-snap-gene-5.19")

HSP 1 Score: 219.164 bits (557), Expect = 3.470e-74
Identity = 122/122 (100.00%), Postives = 122/122 (100.00%), Query Frame = 0 
Query:    1 MVNLLEVQSPPQIQPLALLVPRLLQRQSPLLESPPMMXLPVFHPPQILMANLRLHQFRNQLMTPPPPFLHKKLQWIPMVSPRVLLLHQLPPPLVQLVRLVLPLSYRYHPPANLFRLIPMVHL 122
            MVNLLEVQSPPQIQPLALLVPRLLQRQSPLLESPPMMXLPVFHPPQILMANLRLHQFRNQLMTPPPPFLHKKLQWIPMVSPRVLLLHQLPPPLVQLVRLVLPLSYRYHPPANLFRLIPMVHL
Sbjct:    1 MVNLLEVQSPPQIQPLALLVPRLLQRQSPLLESPPMMXLPVFHPPQILMANLRLHQFRNQLMTPPPPFLHKKLQWIPMVSPRVLLLHQLPPPLVQLVRLVLPLSYRYHPPANLFRLIPMVHL 122
The following BLAST results are available for this feature:
BLAST of EMLSAG00000002324 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000002324 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000002324 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self)
Total hits: 1
Match NameE-valueIdentityDescription
EMLSAP000000023243.470e-74100.00pep:novel supercontig:LSalAtl2s:LSalAtl2s143:55752... [more]
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BLAST of EMLSAG00000002324 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000002324 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000002324 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017))
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000002324 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s143supercontigLSalAtl2s143:557527..559384 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Blast vs. GO2014-04-02
TblastN vs C. finmarchicus TSA2014-05-09
Blastp vs. self2014-05-10
Blastp vs. SwissProt2017-02-10
Blastp vs. Selected Arthropods2017-02-20
Blastp vs. NR (2/2017)2017-02-20
Blastp vs. Tigriopus kingsejongensis proteins2018-04-18
Properties
Property NameValue
Logic nameensemblgenomes
Descriptionmaker-LSalAtl2s143-snap-gene-5.19
Biotypeprotein_coding
EvidenceIEA
NoteHypothetical protein
Cross References
External references for this gene
DatabaseAccession
Ensembl Metazoa (gene)EMLSAG00000002324 (primary cross-reference)
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
EMLSAT00000002324EMLSAT00000002324-698171Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at LSalAtl2s143:557527..559384-

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAG00000002324-685090 ID=EMLSAG00000002324-685090|Name=EMLSAG00000002324|organism=Lepeophtheirus salmonis|type=gene|length=1858bp|location=Sequence derived from alignment at LSalAtl2s143:557527..559384- (Lepeophtheirus salmonis)
ATTCAACATCTGTTGTTAATTCTGGATTATCGTCATCATCTGGTGGAAAT
ACAAATTCCGTTTCATCTTCCGGGTCTGCTGATTCTTATGGTGAACCTGC
TGGAAGTCCAATCACCTCCTCAGATTCAACCGCTAGCATTACTGGTTCCT
CGACTATTGCAGCGTCAGAGTCCTCTCCTGGAATCTCCTCCAATGATGCA
KCTACCAGTGTTTCATCCACCTCAGATTCTTATGGCAAACCTCAGGCTAC
ACCAATTTCGCAATCAACTGATGACTCCTCCCCCCCCGTTTCTTCACAAG
AAGCTCCAGTGGATTCCTATGGTGAGCCCCAGAGTACTCCTCTTACATCA
GCTACCTCCTCCTCTAGTTCAACTAGTGAGATTAGTCCTTCCCCTATCGT
ATCGTTATCATCCTCCAGCGAATCTGTTTCGTCTGATTCCTATGGTACAC
CTCTAAGCGATCCATCTGCGTCTGTTGAAACTATATCCCCCGGTACCTCA
TCTTCAACCGGCGTTGCTACATCTGATGCTTATGGCAAACCTCAGAGTGC
CCCCATTGGCTCTTCTTCTCAAAATCAAAATACTCAAGTTGCCGAGGTAT
CATCTAATACAAATTCAGCCACTGGTTCATCAGACTCATATGGTGAGCCT
GAAGAAGGTCCCATTGACGCCTCCTCATTTGCTAGAAGTTCAGTTGACTC
TGAATCGGTTTCTGGATCTACCAAAAGTGAAGGTTCATTTGGAATTCCCC
TTTCAGTGCCAAGTGACACTTCCTCTCAAAAATCCGCCTCGGCTAATATA
AACCTTCAATCAATTACTCCACCCGAAGTTGACGCTCCCAAATCAAGCTA
CGGCTCTCCTCAAGGAGAACCCTTGGGCTCTGAATCCTCCAGTGGCATAA
CTAAAACAATTTCCACTGTATCCCCCATTCCATCTAATGACATTGATATC
CCAAAGACCAACCCCTTAAAAACTGATACTCCCTCTGTTCAATCATCACC
TCTACCTGCTCAAAAGCCTGTGGATAGTTATGGATTACCGATTTCAAAGG
CTATTGGCCAAAATAATTTGGAAAGTATAAGTCAAGAAAAGGAGTCAGAG
TACGATATTATCAATCCCCGAACTGCACGCCCAAAGAAAAATGACAGCAA
TAAAATAAAGAAGGAATCTGGTAATCCTGGGTCTTTTGTAATAACTCCTG
AGGACATAAAAAGTGGCTCAACTATCAATAGTTTCCGCAATGTAGCCCCT
GAAGGAGAACTAGTCTCTGCTGAGGAAGAAGTTAATGGAAAGCCCCTCTT
CAATAATTTAAGAGACAATGTGGCTTCATACACGCGCCCCTCAACAACTC
CTACGGCCATTGTTACCAAAAAACCAATCGAAATTGATCTTGTGTCAGGG
TCTTCTTCAGTAGATTTATCCAATGGAATCGACGAAAATTTCTCAGCCGG
AGATATAGACCTAACAGGAAGTACGTTACTCAAATTCACACAAAATAATA
TATAGTTTATATCATTGACTTTTTTTTATAGGAAGCTCTAACCAAAAGGA
GTACACCGCAAATAGAGGGAAGGAACTGGATGTGGAAGCTCCTTCTACCC
TCTATGGTGCACCAACGGCTCTCAGAGACGGACGACTCTTCACTCAAGTC
CCTGATCTAGAGCCCTTTCAACCTCCAGAAAATAAGAAGAGCTCCAAATT
GAGCAAAAATAGTAAGAAAGATAAGAATAATGATGATAAGGACGAAGCCC
GTAATAAAAGAAAGTCCTCACGATATTCAACTAGCTCCAAGGACTGGTCC
AAACGGATCCAAGCGAGAAGGCAAGGGGGCATCATTTGGAGGAAATATCC
AAAGAATT
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