EMLSAG00000002741, EMLSAG00000002741-685507 (gene) Lepeophtheirus salmonis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of EMLSAG00000002741 vs. C. finmarchicus
Match: gi|592796440|gb|GAXK01158128.1| (TSA: Calanus finmarchicus comp66277_c0_seq4 transcribed RNA sequence) HSP 1 Score: 157.532 bits (397), Expect = 2.948e-41 Identity = 107/214 (50.00%), Postives = 136/214 (63.55%), Query Frame = 0 Query: 68 GNNMSLSLLPTTPNN--RFVYGS-NGSDISRAATFGSTSECSTPFISPQATPVHFSRSRHNSAQGRLCRSRHSSGV----GYYKYVNN-FSPVALNNLNNPFSPQPGTPM---NLMDDSYTSSSSVQYFDSNDVMRSRHSSGGSEQSIQSAPISPTSNXXXXXXXXXXXXXEPRVRQRHASAGTVPTYGGELGGLSALVHSQQPSQQILPVTGE 270 G+ + L LLP+ NN R + S +GSDISRAATFGS SE STPFISPQ TP+ F+RSRHNSAQGRLCRSRHSSGV G Y+Y +SP+ALNNLNNPFSPQP TP+ ++ + SY S+ + Q+ + RSRHSS GS+ + +SAP+SP + Q + RQRH SAG +P G +A +H + Q P+ GE Sbjct: 2420 GSALPLHLLPSNVNNGGRQQHPSGSGSDISRAATFGSASESSTPFISPQGTPIPFNRSRHNSAQGRLCRSRHSSGVPMAGGSYRYQTMPYSPMALNNLNNPFSPQPSTPICQPDMAEPSYQSNIN-QFVSPPEDPRSRHSSAGSDTAPRSAPLSPYNANTAQHNQMN------QGRQRHQSAGQLP------AGATATIHYR--PAQWQPINGE 3016
BLAST of EMLSAG00000002741 vs. C. finmarchicus
Match: gi|592796442|gb|GAXK01158126.1| (TSA: Calanus finmarchicus comp66277_c0_seq2 transcribed RNA sequence) HSP 1 Score: 157.532 bits (397), Expect = 3.055e-41 Identity = 107/214 (50.00%), Postives = 136/214 (63.55%), Query Frame = 0 Query: 68 GNNMSLSLLPTTPNN--RFVYGS-NGSDISRAATFGSTSECSTPFISPQATPVHFSRSRHNSAQGRLCRSRHSSGV----GYYKYVNN-FSPVALNNLNNPFSPQPGTPM---NLMDDSYTSSSSVQYFDSNDVMRSRHSSGGSEQSIQSAPISPTSNXXXXXXXXXXXXXEPRVRQRHASAGTVPTYGGELGGLSALVHSQQPSQQILPVTGE 270 G+ + L LLP+ NN R + S +GSDISRAATFGS SE STPFISPQ TP+ F+RSRHNSAQGRLCRSRHSSGV G Y+Y +SP+ALNNLNNPFSPQP TP+ ++ + SY S+ + Q+ + RSRHSS GS+ + +SAP+SP + Q + RQRH SAG +P G +A +H + Q P+ GE Sbjct: 2420 GSALPLHLLPSNVNNGGRQQHPSGSGSDISRAATFGSASESSTPFISPQGTPIPFNRSRHNSAQGRLCRSRHSSGVPMAGGSYRYQTMPYSPMALNNLNNPFSPQPSTPICQPDMAEPSYQSNIN-QFVSPPEDPRSRHSSAGSDTAPRSAPLSPYNANTAQHNQMN------QGRQRHQSAGQLP------AGATATIHYR--PAQWQPINGE 3016
BLAST of EMLSAG00000002741 vs. C. finmarchicus
Match: gi|592796441|gb|GAXK01158127.1| (TSA: Calanus finmarchicus comp66277_c0_seq3 transcribed RNA sequence) HSP 1 Score: 157.532 bits (397), Expect = 3.098e-41 Identity = 107/214 (50.00%), Postives = 136/214 (63.55%), Query Frame = 0 Query: 68 GNNMSLSLLPTTPNN--RFVYGS-NGSDISRAATFGSTSECSTPFISPQATPVHFSRSRHNSAQGRLCRSRHSSGV----GYYKYVNN-FSPVALNNLNNPFSPQPGTPM---NLMDDSYTSSSSVQYFDSNDVMRSRHSSGGSEQSIQSAPISPTSNXXXXXXXXXXXXXEPRVRQRHASAGTVPTYGGELGGLSALVHSQQPSQQILPVTGE 270 G+ + L LLP+ NN R + S +GSDISRAATFGS SE STPFISPQ TP+ F+RSRHNSAQGRLCRSRHSSGV G Y+Y +SP+ALNNLNNPFSPQP TP+ ++ + SY S+ + Q+ + RSRHSS GS+ + +SAP+SP + Q + RQRH SAG +P G +A +H + Q P+ GE Sbjct: 2420 GSALPLHLLPSNVNNGGRQQHPSGSGSDISRAATFGSASESSTPFISPQGTPIPFNRSRHNSAQGRLCRSRHSSGVPMAGGSYRYQTMPYSPMALNNLNNPFSPQPSTPICQPDMAEPSYQSNIN-QFVSPPEDPRSRHSSAGSDTAPRSAPLSPYNANTAQHNQMN------QGRQRHQSAGQLPA------GATATIHYR--PAQWQPINGE 3016
BLAST of EMLSAG00000002741 vs. C. finmarchicus
Match: gi|592796443|gb|GAXK01158125.1| (TSA: Calanus finmarchicus comp66277_c0_seq1 transcribed RNA sequence) HSP 1 Score: 157.532 bits (397), Expect = 3.209e-41 Identity = 107/214 (50.00%), Postives = 136/214 (63.55%), Query Frame = 0 Query: 68 GNNMSLSLLPTTPNN--RFVYGS-NGSDISRAATFGSTSECSTPFISPQATPVHFSRSRHNSAQGRLCRSRHSSGV----GYYKYVNN-FSPVALNNLNNPFSPQPGTPM---NLMDDSYTSSSSVQYFDSNDVMRSRHSSGGSEQSIQSAPISPTSNXXXXXXXXXXXXXEPRVRQRHASAGTVPTYGGELGGLSALVHSQQPSQQILPVTGE 270 G+ + L LLP+ NN R + S +GSDISRAATFGS SE STPFISPQ TP+ F+RSRHNSAQGRLCRSRHSSGV G Y+Y +SP+ALNNLNNPFSPQP TP+ ++ + SY S+ + Q+ + RSRHSS GS+ + +SAP+SP + Q + RQRH SAG +P G +A +H + Q P+ GE Sbjct: 2420 GSALPLHLLPSNVNNGGRQQHPSGSGSDISRAATFGSASESSTPFISPQGTPIPFNRSRHNSAQGRLCRSRHSSGVPMAGGSYRYQTMPYSPMALNNLNNPFSPQPSTPICQPDMAEPSYQSNIN-QFVSPPEDPRSRHSSAGSDTAPRSAPLSPYNANTAQHNQMN------QGRQRHQSAGQLPA------GATATIHYR--PAQWQPINGE 3016
BLAST of EMLSAG00000002741 vs. C. finmarchicus
Match: gi|592914750|gb|GAXK01043625.1| (TSA: Calanus finmarchicus comp51246_c14_seq17 transcribed RNA sequence) HSP 1 Score: 36.5798 bits (83), Expect = 1.747e-2 Identity = 18/51 (35.29%), Postives = 27/51 (52.94%), Query Frame = 0 Query: 120 SRSRHNSAQGRLCR-SRHSSGVGYYKYVNNFSPVALNNLNNPFSPQPGTPM 169 SR +S GR+C S++ + Y YV+ P L + PF P+P TP+ Sbjct: 42 SRIAVSSLSGRMCHISKYIFSILYS*YVSRLLPTQLTSFEQPFHPKPSTPL 194
BLAST of EMLSAG00000002741 vs. C. finmarchicus
Match: gi|592914752|gb|GAXK01043623.1| (TSA: Calanus finmarchicus comp51246_c14_seq15 transcribed RNA sequence) HSP 1 Score: 36.5798 bits (83), Expect = 1.823e-2 Identity = 18/51 (35.29%), Postives = 27/51 (52.94%), Query Frame = 0 Query: 120 SRSRHNSAQGRLCR-SRHSSGVGYYKYVNNFSPVALNNLNNPFSPQPGTPM 169 SR +S GR+C S++ + Y YV+ P L + PF P+P TP+ Sbjct: 42 SRIAVSSLSGRMCHISKYIFSILYS*YVSRLLPTQLTSFEQPFHPKPSTPL 194
BLAST of EMLSAG00000002741 vs. C. finmarchicus
Match: gi|592914760|gb|GAXK01043615.1| (TSA: Calanus finmarchicus comp51246_c14_seq7 transcribed RNA sequence) HSP 1 Score: 36.5798 bits (83), Expect = 3.702e-2 Identity = 18/51 (35.29%), Postives = 27/51 (52.94%), Query Frame = 0 Query: 120 SRSRHNSAQGRLCR-SRHSSGVGYYKYVNNFSPVALNNLNNPFSPQPGTPM 169 SR +S GR+C S++ + Y YV+ P L + PF P+P TP+ Sbjct: 42 SRIAVSSLSGRMCHISKYIFSILYS*YVSRLLPTQLTSFEQPFHPKPSTPL 194
BLAST of EMLSAG00000002741 vs. L. salmonis peptides
Match: EMLSAP00000002741 (pep:novel supercontig:LSalAtl2s:LSalAtl2s158:74500:75777:-1 gene:EMLSAG00000002741 transcript:EMLSAT00000002741 description:"snap_masked-LSalAtl2s158-processed-gene-1.12") HSP 1 Score: 615.535 bits (1586), Expect = 0.000e+0 Identity = 308/308 (100.00%), Postives = 308/308 (100.00%), Query Frame = 0 Query: 1 MVIDDPVQSPAIAAVNSNNSRKRNYGFQPISPRQTGSSQPPSPPSAASPFISPRSTPVPSVRSRHSSGNNMSLSLLPTTPNNRFVYGSNGSDISRAATFGSTSECSTPFISPQATPVHFSRSRHNSAQGRLCRSRHSSGVGYYKYVNNFSPVALNNLNNPFSPQPGTPMNLMDDSYTSSSSVQYFDSNDVMRSRHSSGGSEQSIQSAPISPTSNLMLQGGGGPLGGLEPRVRQRHASAGTVPTYGGELGGLSALVHSQQPSQQILPVTGENIILDSRTPNLLGGKGEKMMNDPLVTQRKKERNKSASP 308 MVIDDPVQSPAIAAVNSNNSRKRNYGFQPISPRQTGSSQPPSPPSAASPFISPRSTPVPSVRSRHSSGNNMSLSLLPTTPNNRFVYGSNGSDISRAATFGSTSECSTPFISPQATPVHFSRSRHNSAQGRLCRSRHSSGVGYYKYVNNFSPVALNNLNNPFSPQPGTPMNLMDDSYTSSSSVQYFDSNDVMRSRHSSGGSEQSIQSAPISPTSNLMLQGGGGPLGGLEPRVRQRHASAGTVPTYGGELGGLSALVHSQQPSQQILPVTGENIILDSRTPNLLGGKGEKMMNDPLVTQRKKERNKSASP Sbjct: 1 MVIDDPVQSPAIAAVNSNNSRKRNYGFQPISPRQTGSSQPPSPPSAASPFISPRSTPVPSVRSRHSSGNNMSLSLLPTTPNNRFVYGSNGSDISRAATFGSTSECSTPFISPQATPVHFSRSRHNSAQGRLCRSRHSSGVGYYKYVNNFSPVALNNLNNPFSPQPGTPMNLMDDSYTSSSSVQYFDSNDVMRSRHSSGGSEQSIQSAPISPTSNLMLQGGGGPLGGLEPRVRQRHASAGTVPTYGGELGGLSALVHSQQPSQQILPVTGENIILDSRTPNLLGGKGEKMMNDPLVTQRKKERNKSASP 308
BLAST of EMLSAG00000002741 vs. Select Arthropod Genomes
Match: gb|KFM61146.1| (hypothetical protein X975_00336, partial [Stegodyphus mimosarum]) HSP 1 Score: 74.3294 bits (181), Expect = 4.897e-14 Identity = 99/310 (31.94%), Postives = 126/310 (40.65%), Query Frame = 0 Query: 19 NSRKRNYGFQPISPRQT-------------------------------GSSQPPSPPSAASPFISPRSTPVPSVRSRHSSGNNMSLSLLPTTPNNRFVYGSNGSDISRAATFGSTSECSTPFISPQATPVHFSRSRHNSAQG-----RLC--------------------RSRHSSGVGYYKYVNNFSPVALNNLNNPFSPQPGTPMNLMDDSYTSSSSVQYFDSNDVMRSRHSSGGSEQSIQSAPISP-----------TSNL----------------MLQGGGGPLGGLEP----RVRQRHASAGTV 241 N+R+R + F PISPR T G SQPPS +A SPF+SPRSTPV RSRHSSG + + S TP F G +S +T +PFISPQ TPV SR RHNS+ G C RSRHSSG G N ++ + P SP L+ + S+ V F S + +RSRH+SG + + P+SP TSNL + G G L P +VRQRHAS+ + Sbjct: 24 NTRRRAFNFMPISPRHTPIPDGINVSGTSALSSPVPNQYPRNMMSTAVGPSQPPS--NAGSPFVSPRSTPVHFCRSRHSSGQS-TYSTSRHTPFQNFDSG-----VSSVST--------SPFISPQTTPVPVSRLRHNSSHGLSKTVTFCSVNSPQVINSQISTSTVGHLRSRHSSGPGGPHISVN----VCSSRSAPLSP-------LVSEHCLPSTFV--FPSGNEVRSRHNSGSN-----TTPLSPVSEQASSSSSCTSNLPDLSSVNEGTSISHSFLNDGAGDLLISANPATFKQVRQRHASSSVI 299
BLAST of EMLSAG00000002741 vs. nr
Match: gi|675368244|gb|KFM61146.1| (hypothetical protein X975_00336, partial [Stegodyphus mimosarum]) HSP 1 Score: 74.3294 bits (181), Expect = 2.396e-11 Identity = 99/310 (31.94%), Postives = 126/310 (40.65%), Query Frame = 0 Query: 19 NSRKRNYGFQPISPRQT-------------------------------GSSQPPSPPSAASPFISPRSTPVPSVRSRHSSGNNMSLSLLPTTPNNRFVYGSNGSDISRAATFGSTSECSTPFISPQATPVHFSRSRHNSAQG-----RLC--------------------RSRHSSGVGYYKYVNNFSPVALNNLNNPFSPQPGTPMNLMDDSYTSSSSVQYFDSNDVMRSRHSSGGSEQSIQSAPISP-----------TSNL----------------MLQGGGGPLGGLEP----RVRQRHASAGTV 241 N+R+R + F PISPR T G SQPPS +A SPF+SPRSTPV RSRHSSG + + S TP F G +S +T +PFISPQ TPV SR RHNS+ G C RSRHSSG G N ++ + P SP L+ + S+ V F S + +RSRH+SG + + P+SP TSNL + G G L P +VRQRHAS+ + Sbjct: 24 NTRRRAFNFMPISPRHTPIPDGINVSGTSALSSPVPNQYPRNMMSTAVGPSQPPS--NAGSPFVSPRSTPVHFCRSRHSSGQS-TYSTSRHTPFQNFDSG-----VSSVST--------SPFISPQTTPVPVSRLRHNSSHGLSKTVTFCSVNSPQVINSQISTSTVGHLRSRHSSGPGGPHISVN----VCSSRSAPLSP-------LVSEHCLPSTFV--FPSGNEVRSRHNSGSN-----TTPLSPVSEQASSSSSCTSNLPDLSSVNEGTSISHSFLNDGAGDLLISANPATFKQVRQRHASSSVI 299
BLAST of EMLSAG00000002741 vs. nr
Match: gi|926613152|ref|XP_013794863.1| (PREDICTED: uncharacterized protein LOC106478835 [Limulus polyphemus]) HSP 1 Score: 67.3958 bits (163), Expect = 8.776e-9 Identity = 59/182 (32.42%), Postives = 78/182 (42.86%), Query Frame = 0 Query: 19 NSRKRNYGFQPISPRQT------------------------------------GSSQPPSPPSAASPFISPRSTPVP-SVRSRHSSGNNMSLSLLPTTPNNRFVYGSNGSDISRAATFGSTSECSTPFISPQATPVHFSRSRHNSAQ----------------------GRLCRSRHSSGVG 141 N+R+R + F PISP QT G+SQPPS +A+SPF+SP STP+P + RSRH+SG + YG+ + G +S ++PF+SP ATP SR RHNS+Q G + RSRHSSG G Sbjct: 1088 NTRRRAFNFLPISPHQTPYSDIAGTPISASPVPSQGRGGGGSGILTGSSIGASGTSQPPS--AASSPFVSPNSTPIPWTTRSRHNSG--------------QTSYGTARHTPFQNMDSGVSSVTNSPFVSPHATPAPVSRLRHNSSQSQGKTVTFSAGPIVMHTQTSHLGHIMRSRHSSGPG 1253
BLAST of EMLSAG00000002741 vs. nr
Match: gi|1009599803|ref|XP_015928245.1| (PREDICTED: DNA-binding protein RFX7-like [Parasteatoda tepidariorum]) HSP 1 Score: 67.0106 bits (162), Expect = 9.933e-9 Identity = 71/196 (36.22%), Postives = 82/196 (41.84%), Query Frame = 0 Query: 19 NSRKRNYGFQPISPRQT--------------------------GSSQPPSPPSAASPFISPRSTPVPSVRSRHSSGNNMSLSLLPTTPNNRFVYGSNGSDISRAATFGSTSECSTPFISPQATPVHFSRSRHNSAQG-----RLC---------------RSRHSSGVGYYKYVNNFSPVALNNLNNPFSPQPGTP 168 N+R+R + F PISP T G SQPPS +A SPF+SPRSTPV + RSRHSSG + S TP F G +S S+PFISPQ TPV SR RHNS+ C RSRH+SG G N LN NP SP P Sbjct: 973 NTRRRAFNFMPISPSHTPIPDMSGSVSSPIPNQFPRNMMSIGVGPSQPPS--NAGSPFVSPRSTPVSTCRSRHSSGQSTSRH----TPFQNF-------------DSGVSSVSSSPFISPQPTPV--SRLRHNSSHSSNKTVTFCSVNSPHIINSLSTSSRSRHNSGPGVQHLSGN-----LNARTNPLSPLVAEP 1142 The following BLAST results are available for this feature:
BLAST of EMLSAG00000002741 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO) Total hits: 0
BLAST of EMLSAG00000002741 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA) Total hits: 7
BLAST of EMLSAG00000002741 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self) Total hits: 1
BLAST of EMLSAG00000002741 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt) Total hits: 0
BLAST of EMLSAG00000002741 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods) Total hits: 1
BLAST of EMLSAG00000002741 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017)) Total hits: 3
BLAST of EMLSAG00000002741 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins) Total hits: 0
Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Cross References
External references for this gene
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at LSalAtl2s158:74500..75777- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>EMLSAG00000002741-685507 ID=EMLSAG00000002741-685507|Name=EMLSAG00000002741|organism=Lepeophtheirus salmonis|type=gene|length=1278bp|location=Sequence derived from alignment at LSalAtl2s158:74500..75777- (Lepeophtheirus salmonis)back to top Add to Basket
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