EMLSAG00000002780, EMLSAG00000002780-685546 (gene) Lepeophtheirus salmonis

Overview
NameEMLSAG00000002780
Unique NameEMLSAG00000002780-685546
Typegene
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Homology
[Close]
BLAST of EMLSAG00000002780 vs. GO
Match: - (symbol:PARL "Presenilins-associated rhomboid-like protein, mitochondrial" species:9913 "Bos taurus" [GO:0004252 "serine-type endopeptidase activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005743 "mitochondrial inner membrane" evidence=IEA] [GO:0016021 "integral component of membrane" evidence=IEA] [GO:0090201 "negative regulation of release of cytochrome c from mitochondria" evidence=IEA] [GO:2001243 "negative regulation of intrinsic apoptotic signaling pathway" evidence=IEA] InterPro:IPR002610 InterPro:IPR022764 Pfam:PF01694 GO:GO:0016021 GO:GO:0005634 GO:GO:0005743 GO:GO:0006508 GO:GO:0004252 Gene3D:1.20.1540.10 PANTHER:PTHR22936 GO:GO:0090201 GO:GO:2001243 eggNOG:COG0705 EMBL:BT020676 EMBL:BT026291 EMBL:BT029889 EMBL:BC112869 RefSeq:NP_001015596.1 UniGene:Bt.4331 ProteinModelPortal:Q2KHV4 STRING:9913.ENSBTAP00000019227 PRIDE:Q2KHV4 Ensembl:ENSBTAT00000019227 GeneID:514191 KEGG:bta:514191 CTD:55486 GeneTree:ENSGT00390000013063 HOGENOM:HOG000230670 HOVERGEN:HBG082107 InParanoid:Q2KHV4 KO:K09650 OMA:HEMRTNS OrthoDB:EOG7NGQBT TreeFam:TF313603 NextBio:20871217 Uniprot:Q2KHV4)

HSP 1 Score: 86.6557 bits (213), Expect = 1.615e-19
Identity = 59/164 (35.98%), Postives = 82/164 (50.00%), Query Frame = 0 
Query:    1 MWRIRCLKVSIIRRYFLSDPRSPNKCFPLFLSSLSHNLLLHFSVIMFVLHSFCDGIV----------------LLNTPVT------------SLGASGYICTILVLFGALNPNALIQI------YRTTSTAIKGLIKLGTAGLVMCWKFYHHAAHLGSTLFGIW 130
            +WR+  L+ ++IR YF S+P S   C P+ LS+ SH  L H +  M+VL SF   IV                +++T V+            SLGASG I T+L       P   + I        T   A+K +I + TAG+++ WKF+ HAAHLG  LFGIW
Sbjct:  180 LWRVPSLQRTMIR-YFTSNPASKVLCSPMLLSTFSHFSLFHMAANMYVLWSFSSSIVNILGQEQFMAVYLSAGVISTFVSYVCKVATGRYGPSLGASGAIMTVLAAVCTKIPEGRLAIIFLPMFTFTAGNALKAIIAMDTAGMILGWKFFDHAAHLGGALFGIW 342
[Close]
BLAST of EMLSAG00000002780 vs. GO
Match: - (symbol:parla "presenilin associated, rhomboid-like a" species:7955 "Danio rerio" [GO:0004252 "serine-type endopeptidase activity" evidence=IEA] [GO:0016021 "integral component of membrane" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0008233 "peptidase activity" evidence=IEA] [GO:0005743 "mitochondrial inner membrane" evidence=IEA] [GO:0008236 "serine-type peptidase activity" evidence=IEA] InterPro:IPR002610 InterPro:IPR022764 Pfam:PF01694 ZFIN:ZDB-GENE-050327-8 GO:GO:0016021 GO:GO:0005743 GO:GO:0006508 GO:GO:0004252 Gene3D:1.20.1540.10 PANTHER:PTHR22936 eggNOG:COG0705 HOGENOM:HOG000230670 HOVERGEN:HBG082107 KO:K09650 EMBL:BC091865 RefSeq:NP_001014320.1 UniGene:Dr.20668 ProteinModelPortal:Q58EK4 GeneID:541485 KEGG:dre:541485 CTD:541485 InParanoid:Q58EK4 NextBio:20879269 Uniprot:Q58EK4)

HSP 1 Score: 85.1149 bits (209), Expect = 5.146e-19
Identity = 56/163 (34.36%), Postives = 82/163 (50.31%), Query Frame = 0 
Query:    2 WRIRCLKVSIIRRYFLSDPRSPNKCFPLFLSSLSHNLLLHFSVIMFVLHSFCDGIV----------------LLNTPVT------------SLGASGYICTILVLFGALNPNALIQIYR------TTSTAIKGLIKLGTAGLVMCWKFYHHAAHLGSTLFGIW 130
            WR+  ++  +++ YF S+P S  +C P+ LSS SH  ++H  V M+VL +F   IV                +++T V+            SLGASG I T+L       P A + I        +   A+K L+ L  AGLV+ W+F+ HAAHLG  LFG+W
Sbjct:  184 WRVPAMQRFLVK-YFTSNPASKTRCLPMVLSSFSHYSVIHMVVNMYVLWTFSSSIVSLLGREQFLALYLSGGVISTFVSYVFKTATGRLGPSLGASGSIMTVLAAVCTKIPEAKLGIVLLPVISFSAGNALKALVALDIAGLVLGWRFFDHAAHLGGALFGVW 345
[Close]
BLAST of EMLSAG00000002780 vs. GO
Match: - (symbol:PARL "Presenilins-associated rhomboid-like protein, mitochondrial" species:9606 "Homo sapiens" [GO:0004252 "serine-type endopeptidase activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IDA] [GO:0005743 "mitochondrial inner membrane" evidence=IEA] [GO:0016021 "integral component of membrane" evidence=IEA] [GO:0090201 "negative regulation of release of cytochrome c from mitochondria" evidence=IEA] [GO:2001243 "negative regulation of intrinsic apoptotic signaling pathway" evidence=IEA] InterPro:IPR002610 InterPro:IPR022764 Pfam:PF01694 GO:GO:0016021 GO:GO:0005739 GO:GO:0005634 GO:GO:0005743 GO:GO:0006508 GO:GO:0004252 Gene3D:1.20.1540.10 PANTHER:PTHR22936 GO:GO:0090201 GO:GO:2001243 eggNOG:COG0705 CTD:55486 HOGENOM:HOG000230670 HOVERGEN:HBG082107 KO:K09650 OMA:HEMRTNS OrthoDB:EOG7NGQBT TreeFam:TF313603 EMBL:AF197937 EMBL:BC003653 EMBL:BC014058 EMBL:AF116692 RefSeq:NP_001032728.1 RefSeq:NP_061092.3 UniGene:Hs.478469 ProteinModelPortal:Q9H300 BioGrid:120678 STRING:9606.ENSP00000325421 MEROPS:S54.009 PhosphoSite:Q9H300 DMDM:143811433 PaxDb:Q9H300 PRIDE:Q9H300 DNASU:55486 Ensembl:ENST00000311101 Ensembl:ENST00000317096 GeneID:55486 KEGG:hsa:55486 UCSC:uc003fmd.3 UCSC:uc003fme.3 GeneCards:GC03M183547 HGNC:HGNC:18253 HPA:HPA019545 MIM:607858 neXtProt:NX_Q9H300 PharmGKB:PA134939789 InParanoid:Q9H300 PhylomeDB:Q9H300 GeneWiki:PARL GenomeRNAi:55486 NextBio:59867 PMAP-CutDB:Q9H300 PRO:PR:Q9H300 ArrayExpress:Q9H300 Bgee:Q9H300 CleanEx:HS_PARL Genevestigator:Q9H300 Uniprot:Q9H300)

HSP 1 Score: 85.1149 bits (209), Expect = 5.670e-19
Identity = 59/164 (35.98%), Postives = 79/164 (48.17%), Query Frame = 0 
Query:    1 MWRIRCLKVSIIRRYFLSDPRSPNKCFPLFLSSLSHNLLLHFSVIMFVLHSFCDGIV-----------LLNTPV-----------------TSLGASGYICTILVLFGALNPNALIQI------YRTTSTAIKGLIKLGTAGLVMCWKFYHHAAHLGSTLFGIW 130
            +WR+  L+ ++IR YF S+P S   C P+ LS+ SH  L H +  M+VL SF   IV            L+  V                  SLGASG I T+L       P   + I        T   A+K +I + TAG+++ WKF+ HAAHLG  LFGIW
Sbjct:  182 LWRVPSLQRTMIR-YFTSNPASKVLCSPMLLSTFSHFSLFHMAANMYVLWSFSSSIVNILGQEQFMAVYLSAGVISNFVSYVGKVATGRYGPSLGASGAIMTVLAAVCTKIPEGRLAIIFLPMFTFTAGNALKAIIAMDTAGMILGWKFFDHAAHLGGALFGIW 344
[Close]
BLAST of EMLSAG00000002780 vs. GO
Match: - (symbol:Parl "presenilin associated, rhomboid-like" species:10090 "Mus musculus" [GO:0004252 "serine-type endopeptidase activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005739 "mitochondrion" evidence=ISO;IDA] [GO:0005743 "mitochondrial inner membrane" evidence=IMP] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008233 "peptidase activity" evidence=IEA] [GO:0008236 "serine-type peptidase activity" evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral component of membrane" evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA] [GO:0090201 "negative regulation of release of cytochrome c from mitochondria" evidence=IMP] [GO:2001243 "negative regulation of intrinsic apoptotic signaling pathway" evidence=IMP] InterPro:IPR002610 InterPro:IPR022764 Pfam:PF01694 MGI:MGI:1277152 GO:GO:0016021 GO:GO:0005634 GO:GO:0005743 GO:GO:0006508 GO:GO:0004252 Gene3D:1.20.1540.10 PANTHER:PTHR22936 GO:GO:0090201 GO:GO:2001243 eggNOG:COG0705 CTD:55486 GeneTree:ENSGT00390000013063 HOGENOM:HOG000230670 HOVERGEN:HBG082107 KO:K09650 OMA:HEMRTNS OrthoDB:EOG7NGQBT TreeFam:TF313603 EMBL:AK151652 EMBL:BC083153 RefSeq:NP_001005767.1 UniGene:Mm.371737 ProteinModelPortal:Q5XJY4 DIP:DIP-59825N IntAct:Q5XJY4 STRING:10090.ENSMUSP00000045361 PhosphoSite:Q5XJY4 PaxDb:Q5XJY4 PRIDE:Q5XJY4 Ensembl:ENSMUST00000048642 GeneID:381038 KEGG:mmu:381038 UCSC:uc007ypm.1 InParanoid:Q5XJY4 NextBio:401496 PRO:PR:Q5XJY4 ArrayExpress:Q5XJY4 Bgee:Q5XJY4 CleanEx:MM_PARL Genevestigator:Q5XJY4 Uniprot:Q5XJY4)

HSP 1 Score: 85.1149 bits (209), Expect = 5.951e-19
Identity = 59/164 (35.98%), Postives = 79/164 (48.17%), Query Frame = 0 
Query:    1 MWRIRCLKVSIIRRYFLSDPRSPNKCFPLFLSSLSHNLLLHFSVIMFVLHSFCDGIV-----------LLNTPV-----------------TSLGASGYICTILVLFGALNPNALIQI------YRTTSTAIKGLIKLGTAGLVMCWKFYHHAAHLGSTLFGIW 130
            +WR+  L+ ++IR YF S+P S   C P+ LS+ SH  L H +  M+VL SF   IV            L+  V                  SLGASG I T+L       P   + I        T   A+K +I + TAG+++ WKF+ HAAHLG  LFGIW
Sbjct:  180 LWRVPSLQRTMIR-YFTSNPASKVLCSPMLLSTFSHFSLFHMAANMYVLWSFSSSIVNILGQEQFVAVYLSAGVISNFVSYVCKVATGRYGPSLGASGAIMTVLAAVCTKIPEGRLAIIFLPVFTFTAGNALKAIIAMDTAGMILGWKFFDHAAHLGGALFGIW 342
[Close]
BLAST of EMLSAG00000002780 vs. GO
Match: - (symbol:PARL "Uncharacterized protein" species:9615 "Canis lupus familiaris" [GO:0004252 "serine-type endopeptidase activity" evidence=IEA] [GO:0005743 "mitochondrial inner membrane" evidence=IEA] [GO:0016021 "integral component of membrane" evidence=IEA] [GO:0090201 "negative regulation of release of cytochrome c from mitochondria" evidence=IEA] [GO:2001243 "negative regulation of intrinsic apoptotic signaling pathway" evidence=IEA] InterPro:IPR002610 InterPro:IPR022764 Pfam:PF01694 GO:GO:0016021 GO:GO:0005743 GO:GO:0006508 GO:GO:0004252 Gene3D:1.20.1540.10 PANTHER:PTHR22936 GO:GO:0090201 GO:GO:2001243 CTD:55486 GeneTree:ENSGT00390000013063 KO:K09650 OMA:HEMRTNS OrthoDB:EOG7NGQBT TreeFam:TF313603 EMBL:AAEX03017269 RefSeq:XP_545224.2 ProteinModelPortal:E2RQQ1 Ensembl:ENSCAFT00000019032 GeneID:488100 KEGG:cfa:488100 NextBio:20861529 Uniprot:E2RQQ1)

HSP 1 Score: 85.1149 bits (209), Expect = 6.152e-19
Identity = 59/164 (35.98%), Postives = 79/164 (48.17%), Query Frame = 0 
Query:    1 MWRIRCLKVSIIRRYFLSDPRSPNKCFPLFLSSLSHNLLLHFSVIMFVLHSFCDGIV-----------LLNTPV-----------------TSLGASGYICTILVLFGALNPNALIQI------YRTTSTAIKGLIKLGTAGLVMCWKFYHHAAHLGSTLFGIW 130
            +WR+  L+ ++IR YF S+P S   C P+ LS+ SH  L H +  M+VL SF   IV            L+  V                  SLGASG I T+L       P   + I        T   A+K +I + TAG+++ WKF+ HAAHLG  LFGIW
Sbjct:  182 LWRVPSLQRTMIR-YFTSNPASKVLCSPMLLSTFSHFSLFHMAANMYVLWSFSSSIVNILGQEQFMAVYLSAGVISNFVSYVCKVATGRYGPSLGASGAIMTVLAAVCTKIPEGRLAIIFLPMFTFTAGNALKAIIAMDTAGMILGWKFFDHAAHLGGALFGIW 344
[Close]
BLAST of EMLSAG00000002780 vs. GO
Match: - (symbol:Parl "Presenilins-associated rhomboid-like protein, mitochondrial" species:10116 "Rattus norvegicus" [GO:0004252 "serine-type endopeptidase activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005743 "mitochondrial inner membrane" evidence=IEA] [GO:0016021 "integral component of membrane" evidence=IEA] InterPro:IPR002610 InterPro:IPR022764 Pfam:PF01694 RGD:1306191 GO:GO:0016021 GO:GO:0005634 GO:GO:0005743 GO:GO:0006508 GO:GO:0004252 Gene3D:1.20.1540.10 PANTHER:PTHR22936 eggNOG:COG0705 CTD:55486 HOGENOM:HOG000230670 HOVERGEN:HBG082107 KO:K09650 EMBL:BC088226 EMBL:BC105907 RefSeq:NP_001030326.1 UniGene:Rn.7053 ProteinModelPortal:Q3B8P0 PhosphoSite:Q3B8P0 PaxDb:Q3B8P0 PRIDE:Q3B8P0 GeneID:287979 KEGG:rno:287979 InParanoid:Q3B8P0 NextBio:627335 Genevestigator:Q3B8P0 Uniprot:Q3B8P0)

HSP 1 Score: 83.5741 bits (205), Expect = 2.173e-18
Identity = 59/164 (35.98%), Postives = 78/164 (47.56%), Query Frame = 0 
Query:    1 MWRIRCLKVSIIRRYFLSDPRSPNKCFPLFLSSLSHNLLLHFSVIMFVLHSFCDGIV-----------LLNTPV-----------------TSLGASGYICTILVLFGALNPNALIQI------YRTTSTAIKGLIKLGTAGLVMCWKFYHHAAHLGSTLFGIW 130
            +WR+  L  ++IR YF S+P S   C P+ LS+ SH  L H +  M+VL SF   IV            L+  V                  SLGASG I T+L       P   + I        T   A+K +I + TAG+++ WKF+ HAAHLG  LFGIW
Sbjct:  180 LWRVPSLHRTMIR-YFTSNPASKVLCSPMLLSTFSHFSLFHMAANMYVLWSFSTSIVNILGQEQFVAVYLSAGVISNFVSYVCKVATGRYGPSLGASGAIMTVLAAVCTKIPEGRLAIIFLPVFTFTAGNALKAIIAMDTAGMILGWKFFDHAAHLGGALFGIW 342
[Close]
BLAST of EMLSAG00000002780 vs. GO
Match: - (symbol:Parl "presenilin associated, rhomboid-like" species:10116 "Rattus norvegicus" [GO:0004252 "serine-type endopeptidase activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005739 "mitochondrion" evidence=ISO] [GO:0005743 "mitochondrial inner membrane" evidence=IEA;ISO] [GO:0016021 "integral component of membrane" evidence=IEA] [GO:0090201 "negative regulation of release of cytochrome c from mitochondria" evidence=IEA;ISO] [GO:2001243 "negative regulation of intrinsic apoptotic signaling pathway" evidence=IEA;ISO] InterPro:IPR002610 InterPro:IPR022764 Pfam:PF01694 RGD:1306191 GO:GO:0016021 GO:GO:0005634 GO:GO:0005743 GO:GO:0006508 GO:GO:0004252 Gene3D:1.20.1540.10 PANTHER:PTHR22936 eggNOG:COG0705 CTD:55486 HOGENOM:HOG000230670 HOVERGEN:HBG082107 KO:K09650 EMBL:BC088226 EMBL:BC105907 RefSeq:NP_001030326.1 UniGene:Rn.7053 ProteinModelPortal:Q3B8P0 PhosphoSite:Q3B8P0 PaxDb:Q3B8P0 PRIDE:Q3B8P0 GeneID:287979 KEGG:rno:287979 InParanoid:Q3B8P0 NextBio:627335 Genevestigator:Q3B8P0 Uniprot:Q3B8P0)

HSP 1 Score: 83.5741 bits (205), Expect = 2.173e-18
Identity = 59/164 (35.98%), Postives = 78/164 (47.56%), Query Frame = 0 
Query:    1 MWRIRCLKVSIIRRYFLSDPRSPNKCFPLFLSSLSHNLLLHFSVIMFVLHSFCDGIV-----------LLNTPV-----------------TSLGASGYICTILVLFGALNPNALIQI------YRTTSTAIKGLIKLGTAGLVMCWKFYHHAAHLGSTLFGIW 130
            +WR+  L  ++IR YF S+P S   C P+ LS+ SH  L H +  M+VL SF   IV            L+  V                  SLGASG I T+L       P   + I        T   A+K +I + TAG+++ WKF+ HAAHLG  LFGIW
Sbjct:  180 LWRVPSLHRTMIR-YFTSNPASKVLCSPMLLSTFSHFSLFHMAANMYVLWSFSTSIVNILGQEQFVAVYLSAGVISNFVSYVCKVATGRYGPSLGASGAIMTVLAAVCTKIPEGRLAIIFLPVFTFTAGNALKAIIAMDTAGMILGWKFFDHAAHLGGALFGIW 342
[Close]
BLAST of EMLSAG00000002780 vs. GO
Match: - (symbol:rho-7 "rhomboid-7" species:7227 "Drosophila melanogaster" [GO:0016021 "integral component of membrane" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0004252 "serine-type endopeptidase activity" evidence=IEA] [GO:0008053 "mitochondrial fusion" evidence=IMP] [GO:0005739 "mitochondrion" evidence=IDA] [GO:0004175 "endopeptidase activity" evidence=IMP] [GO:0016485 "protein processing" evidence=IMP] InterPro:IPR002610 InterPro:IPR022764 Pfam:PF01694 GO:GO:0016021 GO:GO:0005739 GO:GO:0006508 GO:GO:0004252 Gene3D:1.20.1540.10 PANTHER:PTHR22936 GO:GO:0004175 GO:GO:0008053 GO:GO:0016485 MEROPS:S54.A12 FlyBase:FBgn0033672 EMBL:AY122236 ProteinModelPortal:Q8MQY3 PRIDE:Q8MQY3 InParanoid:Q8MQY3 Bgee:Q8MQY3 Uniprot:Q8MQY3)

HSP 1 Score: 80.4925 bits (197), Expect = 3.205e-17
Identity = 56/163 (34.36%), Postives = 78/163 (47.85%), Query Frame = 0 
Query:    1 MWRIRCLKVSIIRRYFLSDPRSPNKCFPLFLSSLSHNLLLHFSVIMFVLHSFCDG-----------IVLLNTPV-----------------TSLGASGYICTILVLFGALNPNALIQI------YRTTSTAIKGLIKLGTAGLVMCWKFYHHAAHLGSTLFGI 129
            MWR+  LK ++I  YF S+P +   C+P+FLS+ SH   +H    M+V+HSF +             V L+  V                  SLGASG I T+L       P+  + I        +    IK L+ +  AG+VM WKF+ HAAHLG  +FGI
Sbjct:  190 MWRVPALKSTMIT-YFTSNPAAKVVCWPMFLSTFSHYSAMHLFANMYVMHSFANAAAVSLGKEQFLAVYLSAGVFSSLMSVLYKAATSQAGMSLGASGAIMTLLAYVCTQYPDTQLSILFLPALTFSAGAGIKVLMGIDFAGVVMGWKFFDHAAHLGGAMFGI 351
[Close]
BLAST of EMLSAG00000002780 vs. GO
Match: - (symbol:PARL "Uncharacterized protein" species:9031 "Gallus gallus" [GO:0004252 "serine-type endopeptidase activity" evidence=IEA] [GO:0005743 "mitochondrial inner membrane" evidence=IEA] [GO:0016021 "integral component of membrane" evidence=IEA] [GO:0090201 "negative regulation of release of cytochrome c from mitochondria" evidence=IEA] [GO:2001243 "negative regulation of intrinsic apoptotic signaling pathway" evidence=IEA] InterPro:IPR002610 InterPro:IPR022764 Pfam:PF01694 GO:GO:0016021 GO:GO:0006508 GO:GO:0004252 Gene3D:1.20.1540.10 PANTHER:PTHR22936 GeneTree:ENSGT00390000013063 OrthoDB:EOG7NGQBT TreeFam:TF313603 EMBL:AADN03005795 Ensembl:ENSGALT00000041232 Uniprot:F1NUI6)

HSP 1 Score: 72.7886 bits (177), Expect = 3.481e-15
Identity = 51/154 (33.12%), Postives = 68/154 (44.16%), Query Frame = 0 
Query:   11 IIRRYFLSDPRSPNKCFPLFLSSLSHNLLLHFSVIMF--------------------------VLHSFCDGIVLLNTP--VTSLGASGYICTILVLFGALNPNALIQI------YRTTSTAIKGLIKLGTAGLVMCWKFYHHAAHLGSTLFGIW 130
            I+  YF SDP S   C P+ LS+ SH  L H +  M+                          V+ +F   +  + T     SLGASG I T+L       P A + I        T   A+K +I   TAGL + W+F+ HAAHLG  LFG+W
Sbjct:    4 IMFTYFTSDPSSKALCSPMLLSTFSHFSLFHMAANMYVLWSFSSSVVSLLGCEQFIAVYLSAGVISTFVSYVAKMATGKFEPSLGASGAIMTVLAAVCTKMPEAKLAIIFLPMFTFTAGNALKAIIAFDTAGLALGWRFFDHAAHLGGALFGMW 157
[Close]
BLAST of EMLSAG00000002780 vs. GO
Match: - (symbol:Parl "Presenilins-associated rhomboid-like protein, mitochondrial" species:10116 "Rattus norvegicus" [GO:0004252 "serine-type endopeptidase activity" evidence=IEA] [GO:0016021 "integral component of membrane" evidence=IEA] InterPro:IPR002610 InterPro:IPR022764 Pfam:PF01694 RGD:1306191 GO:GO:0016021 GO:GO:0006508 GO:GO:0004252 Gene3D:1.20.1540.10 PANTHER:PTHR22936 GeneTree:ENSGT00390000013063 EMBL:AABR06069476 EMBL:AABR06069477 EMBL:AABR06069478 Ensembl:ENSRNOT00000071076 Uniprot:M0R589)

HSP 1 Score: 68.9366 bits (167), Expect = 3.650e-13
Identity = 49/139 (35.25%), Postives = 63/139 (45.32%), Query Frame = 0 
Query:   26 CFPLFLSSLSHNLLLHFSVIMFVLHSFCDGIV-----------LLNTPV-----------------TSLGASGYICTILVLFGALNPNALIQI------YRTTSTAIKGLIKLGTAGLVMCWKFYHHAAHLGSTLFGIW 130
            C P+ LS+ SH  L H +  M+VL SF   IV            L+  V                  SLGASG I T+L       P   + I        T   A+K +I + TAG+++ WKF+ HAAHLG  LFGIW
Sbjct:  190 CSPMLLSTFSHFSLFHMAANMYVLWSFSTSIVNILGQEQFVAVYLSAGVISNFVSYVCKVATGRYGPSLGASGAIMTVLAAVCTKIPEGRLAIIFLPVFTFTAGNALKAIIAMDTAGMILGWKFFDHAAHLGGALFGIW 328
[Close]
BLAST of EMLSAG00000002780 vs. C. finmarchicus
Match: gi|592776506|gb|GAXK01178062.1| (TSA: Calanus finmarchicus comp15387_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 62.003 bits (149), Expect = 2.551e-11
Identity = 54/162 (33.33%), Postives = 80/162 (49.38%), Query Frame = 0 
Query:    2 WRIRCLKVSIIRRYFLSDPRSPNKCFPXXXXXXXXXXXXXXXVIMFVLHSF------------------CDGI----------VLLNTPVTSLGASGYICTILVLFGALNPNALIQIY------RTTSTAIKGLIKLGTAGLVMCWKFYHHAAHLGSTLFGI 129
            W++  ++ S + R+F+ +P S   C PL LS+ SH+ L+H    M VLHSF                    G+          V + +   SLGASG IC +L +FG+  P A +QI        + +TAIK +  +  AGLV+ W+ + HAAHL   L G+
Sbjct:   11 WKVPAMQ-SFMMRWFMGNPASRATCIPLLLSAFSHHSLIHLGCNMMVLHSFMPPAVHLLGKEQFLAVYLSSGVITSLASMVHKVAVGSTAYSLGASGAICCVLGMFGSYVPEAKMQILFLPMITFSAATAIKTMALVDLAGLVLRWRLFDHAAHLSGILCGV 493
[Close]
BLAST of EMLSAG00000002780 vs. L. salmonis peptides
Match: EMLSAP00000002780 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1607:22684:23168:1 gene:EMLSAG00000002780 transcript:EMLSAT00000002780 description:"maker-LSalAtl2s1607-snap-gene-0.0")

HSP 1 Score: 263.077 bits (671), Expect = 2.824e-91
Identity = 130/130 (100.00%), Postives = 130/130 (100.00%), Query Frame = 0 
Query:    1 MWRIRCLKVSIIRRYFLSDPRSPNKCFPLFLSSLSHNLLLHFSVIMFVLHSFCDGIVLLNTPVTSLGASGYICTILVLFGALNPNALIQIYRTTSTAIKGLIKLGTAGLVMCWKFYHHAAHLGSTLFGIW 130
            MWRIRCLKVSIIRRYFLSDPRSPNKCFPLFLSSLSHNLLLHFSVIMFVLHSFCDGIVLLNTPVTSLGASGYICTILVLFGALNPNALIQIYRTTSTAIKGLIKLGTAGLVMCWKFYHHAAHLGSTLFGIW
Sbjct:    1 MWRIRCLKVSIIRRYFLSDPRSPNKCFPLFLSSLSHNLLLHFSVIMFVLHSFCDGIVLLNTPVTSLGASGYICTILVLFGALNPNALIQIYRTTSTAIKGLIKLGTAGLVMCWKFYHHAAHLGSTLFGIW 130
[Close]
BLAST of EMLSAG00000002780 vs. L. salmonis peptides
Match: EMLSAP00000008866 (pep:novel supercontig:LSalAtl2s:LSalAtl2s553:52741:53181:-1 gene:EMLSAG00000008866 transcript:EMLSAT00000008866 description:"augustus_masked-LSalAtl2s553-processed-gene-0.4")

HSP 1 Score: 100.908 bits (250), Expect = 1.204e-27
Identity = 62/119 (52.10%), Postives = 67/119 (56.30%), Query Frame = 0 
Query:   46 MFVLHSFCDGIV----------------------------LLNTPVTSLGASGYICTILVLFGALNPNALIQIYR------TTSTAIKGLIKLGTAGLVMCWKFYHHAAHLGSTLFGIW 130
            MFVLHSFCDGIV                            LLNT   SLGASG IC +L LFG LNPN+L+QI          S AIKGLI L TAGL+M WK + HAAHLG TLFGIW
Sbjct:    1 MFVLHSFCDGIVRALGKEQFVGVYLTAGXVSGFVSLVTKVLLNTSAPSLGASGCICAVLGLFGTLNPNSLMQIVFIPGFTFXASXAIKGLITLDTAGLLMGWKVFDHAAHLGGTLFGIW 119
[Close]
BLAST of EMLSAG00000002780 vs. SwissProt
Match: gi|110287782|sp|Q2KHV4.1|PARL_BOVIN (RecName: Full=Presenilins-associated rhomboid-like protein, mitochondrial; AltName: Full=Mitochondrial intramembrane cleaving protease PARL; Contains: RecName: Full=P-beta; Short=Pbeta; Flags: Precursor)

HSP 1 Score: 86.6557 bits (213), Expect = 6.668e-20
Identity = 59/164 (35.98%), Postives = 82/164 (50.00%), Query Frame = 0 
Query:    1 MWRIRCLKVSIIRRYFLSDPRSPNKCFPLFLSSLSHNLLLHFSVIMFVLHSFCDGIV----------------LLNTPVT------------SLGASGYICTILVLFGALNPNALIQI------YRTTSTAIKGLIKLGTAGLVMCWKFYHHAAHLGSTLFGIW 130
            +WR+  L+ ++IR YF S+P S   C P+ LS+ SH  L H +  M+VL SF   IV                +++T V+            SLGASG I T+L       P   + I        T   A+K +I + TAG+++ WKF+ HAAHLG  LFGIW
Sbjct:  180 LWRVPSLQRTMIR-YFTSNPASKVLCSPMLLSTFSHFSLFHMAANMYVLWSFSSSIVNILGQEQFMAVYLSAGVISTFVSYVCKVATGRYGPSLGASGAIMTVLAAVCTKIPEGRLAIIFLPMFTFTAGNALKAIIAMDTAGMILGWKFFDHAAHLGGALFGIW 342
[Close]
BLAST of EMLSAG00000002780 vs. SwissProt
Match: gi|62511102|sp|Q5R5H4.1|PARL_PONAB (RecName: Full=Presenilins-associated rhomboid-like protein, mitochondrial; AltName: Full=Mitochondrial intramembrane-cleaving protease PARL; Contains: RecName: Full=P-beta; Short=Pbeta; Flags: Precursor)

HSP 1 Score: 85.1149 bits (209), Expect = 2.031e-19
Identity = 59/164 (35.98%), Postives = 79/164 (48.17%), Query Frame = 0 
Query:    1 MWRIRCLKVSIIRRYFLSDPRSPNKCFPLFLSSLSHNLLLHFSVIMFVLHSFCDGIV-----------LLNTPV-----------------TSLGASGYICTILVLFGALNPNALIQI------YRTTSTAIKGLIKLGTAGLVMCWKFYHHAAHLGSTLFGIW 130
            +WR+  L+ ++IR YF S+P S   C P+ LS+ SH  L H +  M+VL SF   IV            L+  V                  SLGASG I T+L       P   + I        T   A+K +I + TAG+++ WKF+ HAAHLG  LFGIW
Sbjct:  182 LWRVPSLQRTMIR-YFTSNPASKVLCSPMLLSTFSHFSLFHMAANMYVLWSFSSSIVNILGQEQFMAVYLSAGVISNFVSYVGKVATGRYGPSLGASGAIMTVLAAVCTKIPEGRLAIIFLPMFTFTAGNALKAIIAMDTAGMILGWKFFDHAAHLGGALFGIW 344
[Close]
BLAST of EMLSAG00000002780 vs. SwissProt
Match: gi|82178438|sp|Q58EK4.1|PARL_DANRE (RecName: Full=Presenilins-associated rhomboid-like protein, mitochondrial; Flags: Precursor)

HSP 1 Score: 85.1149 bits (209), Expect = 2.043e-19
Identity = 56/163 (34.36%), Postives = 82/163 (50.31%), Query Frame = 0 
Query:    2 WRIRCLKVSIIRRYFLSDPRSPNKCFPLFLSSLSHNLLLHFSVIMFVLHSFCDGIV----------------LLNTPVT------------SLGASGYICTILVLFGALNPNALIQIYR------TTSTAIKGLIKLGTAGLVMCWKFYHHAAHLGSTLFGIW 130
            WR+  ++  +++ YF S+P S  +C P+ LSS SH  ++H  V M+VL +F   IV                +++T V+            SLGASG I T+L       P A + I        +   A+K L+ L  AGLV+ W+F+ HAAHLG  LFG+W
Sbjct:  184 WRVPAMQRFLVK-YFTSNPASKTRCLPMVLSSFSHYSVIHMVVNMYVLWTFSSSIVSLLGREQFLALYLSGGVISTFVSYVFKTATGRLGPSLGASGSIMTVLAAVCTKIPEAKLGIVLLPVISFSAGNALKALVALDIAGLVLGWRFFDHAAHLGGALFGVW 345
[Close]
BLAST of EMLSAG00000002780 vs. SwissProt
Match: gi|143811433|sp|Q9H300.2|PARL_HUMAN (RecName: Full=Presenilins-associated rhomboid-like protein, mitochondrial; AltName: Full=Mitochondrial intramembrane cleaving protease PARL; Contains: RecName: Full=P-beta; Short=Pbeta; Flags: Precursor)

HSP 1 Score: 85.1149 bits (209), Expect = 2.292e-19
Identity = 59/164 (35.98%), Postives = 79/164 (48.17%), Query Frame = 0 
Query:    1 MWRIRCLKVSIIRRYFLSDPRSPNKCFPLFLSSLSHNLLLHFSVIMFVLHSFCDGIV-----------LLNTPV-----------------TSLGASGYICTILVLFGALNPNALIQI------YRTTSTAIKGLIKLGTAGLVMCWKFYHHAAHLGSTLFGIW 130
            +WR+  L+ ++IR YF S+P S   C P+ LS+ SH  L H +  M+VL SF   IV            L+  V                  SLGASG I T+L       P   + I        T   A+K +I + TAG+++ WKF+ HAAHLG  LFGIW
Sbjct:  182 LWRVPSLQRTMIR-YFTSNPASKVLCSPMLLSTFSHFSLFHMAANMYVLWSFSSSIVNILGQEQFMAVYLSAGVISNFVSYVGKVATGRYGPSLGASGAIMTVLAAVCTKIPEGRLAIIFLPMFTFTAGNALKAIIAMDTAGMILGWKFFDHAAHLGGALFGIW 344
[Close]
BLAST of EMLSAG00000002780 vs. SwissProt
Match: gi|62511107|sp|Q5XJY4.1|PARL_MOUSE (RecName: Full=Presenilins-associated rhomboid-like protein, mitochondrial; AltName: Full=Mitochondrial intramembrane-cleaving protease PARL; Contains: RecName: Full=P-beta; Short=Pbeta; Flags: Precursor)

HSP 1 Score: 85.1149 bits (209), Expect = 2.427e-19
Identity = 59/164 (35.98%), Postives = 79/164 (48.17%), Query Frame = 0 
Query:    1 MWRIRCLKVSIIRRYFLSDPRSPNKCFPLFLSSLSHNLLLHFSVIMFVLHSFCDGIV-----------LLNTPV-----------------TSLGASGYICTILVLFGALNPNALIQI------YRTTSTAIKGLIKLGTAGLVMCWKFYHHAAHLGSTLFGIW 130
            +WR+  L+ ++IR YF S+P S   C P+ LS+ SH  L H +  M+VL SF   IV            L+  V                  SLGASG I T+L       P   + I        T   A+K +I + TAG+++ WKF+ HAAHLG  LFGIW
Sbjct:  180 LWRVPSLQRTMIR-YFTSNPASKVLCSPMLLSTFSHFSLFHMAANMYVLWSFSSSIVNILGQEQFVAVYLSAGVISNFVSYVCKVATGRYGPSLGASGAIMTVLAAVCTKIPEGRLAIIFLPVFTFTAGNALKAIIAMDTAGMILGWKFFDHAAHLGGALFGIW 342
[Close]
BLAST of EMLSAG00000002780 vs. SwissProt
Match: gi|118582201|sp|Q3B8P0.1|PARL_RAT (RecName: Full=Presenilins-associated rhomboid-like protein, mitochondrial; AltName: Full=Mitochondrial intramembrane-cleaving protease PARL; Contains: RecName: Full=P-beta; Short=Pbeta; Flags: Precursor)

HSP 1 Score: 83.5741 bits (205), Expect = 8.719e-19
Identity = 59/164 (35.98%), Postives = 78/164 (47.56%), Query Frame = 0 
Query:    1 MWRIRCLKVSIIRRYFLSDPRSPNKCFPLFLSSLSHNLLLHFSVIMFVLHSFCDGIV-----------LLNTPV-----------------TSLGASGYICTILVLFGALNPNALIQI------YRTTSTAIKGLIKLGTAGLVMCWKFYHHAAHLGSTLFGIW 130
            +WR+  L  ++IR YF S+P S   C P+ LS+ SH  L H +  M+VL SF   IV            L+  V                  SLGASG I T+L       P   + I        T   A+K +I + TAG+++ WKF+ HAAHLG  LFGIW
Sbjct:  180 LWRVPSLHRTMIR-YFTSNPASKVLCSPMLLSTFSHFSLFHMAANMYVLWSFSTSIVNILGQEQFVAVYLSAGVISNFVSYVCKVATGRYGPSLGASGAIMTVLAAVCTKIPEGRLAIIFLPVFTFTAGNALKAIIAMDTAGMILGWKFFDHAAHLGGALFGIW 342
[Close]
BLAST of EMLSAG00000002780 vs. Select Arthropod Genomes
Match: EFX76957.1 (hypothetical protein DAPPUDRAFT_306013 [Daphnia pulex])

HSP 1 Score: 83.5741 bits (205), Expect = 8.957e-20
Identity = 56/162 (34.57%), Postives = 80/162 (49.38%), Query Frame = 0 
Query:    2 WRIRCLKVSIIRRYFLSDPRSPNKCFPLFLSSLSHNLLLHFSVIMFVLHSFCD------------------GIV----------LLNTPVTSLGASGYICTILVLFGALNPNALIQIYR------TTSTAIKGLIKLGTAGLVMCWKFYHHAAHLGSTLFGI 129
            WRI  L   +I  YF S+P +   C+P+  S+ SH+  LHF   M+VL+SF +                  G++           L  P  SLGASG I  +L  F + +P+AL+QI        T  + +K L+   T GL+M WK + HAAHLG  +FG+
Sbjct:   62 WRIPALTQFMIS-YFCSNPFARAVCWPMVFSTFSHHSFLHFGANMYVLYSFMNATTHYMGKEQFLAFYLSAGVISSLASHIFKTALRMPGISLGASGAIMGVLAYFCSQHPDALLQIAFIPGFTFTADSGLKALLCFDTVGLIMRWKLFDHAAHLGGAIFGL 222
[Close]
BLAST of EMLSAG00000002780 vs. Select Arthropod Genomes
Match: AHN56122.1 (rhomboid-7, isoform B [Drosophila melanogaster])

HSP 1 Score: 80.4925 bits (197), Expect = 4.277e-18
Identity = 56/163 (34.36%), Postives = 78/163 (47.85%), Query Frame = 0 
Query:    1 MWRIRCLKVSIIRRYFLSDPRSPNKCFPLFLSSLSHNLLLHFSVIMFVLHSFCDG-----------IVLLNTPV-----------------TSLGASGYICTILVLFGALNPNALIQI------YRTTSTAIKGLIKLGTAGLVMCWKFYHHAAHLGSTLFGI 129
            MWR+  LK ++I  YF S+P +   C+P+FLS+ SH   +H    M+V+HSF +             V L+  V                  SLGASG I T+L       P+  + I        +    IK L+ +  AG+VM WKF+ HAAHLG  +FGI
Sbjct:  161 MWRVPALKSTMIT-YFTSNPAAKVVCWPMFLSTFSHYSAMHLFANMYVMHSFANAAAVSLGKEQFLAVYLSAGVFSSLMSVLYKAATSQAGMSLGASGAIMTLLAYVCTQYPDTQLSILFLPALTFSAGAGIKVLMGIDFAGVVMGWKFFDHAAHLGGAMFGI 322
[Close]
BLAST of EMLSAG00000002780 vs. Select Arthropod Genomes
Match: AAF58598.1 (rhomboid-7, isoform A [Drosophila melanogaster])

HSP 1 Score: 80.4925 bits (197), Expect = 4.277e-18
Identity = 56/163 (34.36%), Postives = 78/163 (47.85%), Query Frame = 0 
Query:    1 MWRIRCLKVSIIRRYFLSDPRSPNKCFPLFLSSLSHNLLLHFSVIMFVLHSFCDG-----------IVLLNTPV-----------------TSLGASGYICTILVLFGALNPNALIQI------YRTTSTAIKGLIKLGTAGLVMCWKFYHHAAHLGSTLFGI 129
            MWR+  LK ++I  YF S+P +   C+P+FLS+ SH   +H    M+V+HSF +             V L+  V                  SLGASG I T+L       P+  + I        +    IK L+ +  AG+VM WKF+ HAAHLG  +FGI
Sbjct:  161 MWRVPALKSTMIT-YFTSNPAAKVVCWPMFLSTFSHYSAMHLFANMYVMHSFANAAAVSLGKEQFLAVYLSAGVFSSLMSVLYKAATSQAGMSLGASGAIMTLLAYVCTQYPDTQLSILFLPALTFSAGAGIKVLMGIDFAGVVMGWKFFDHAAHLGGAMFGI 322
[Close]
BLAST of EMLSAG00000002780 vs. Select Arthropod Genomes
Match: gb|KFM82176.1| (Presenilins-associated rhomboid-like protein, mitochondrial, partial [Stegodyphus mimosarum])

HSP 1 Score: 77.0258 bits (188), Expect = 7.451e-17
Identity = 56/163 (34.36%), Postives = 75/163 (46.01%), Query Frame = 0 
Query:    1 MWRIRCLKVSIIRRYFLSDPRSPNKCFPLFLSSLSHNLLLHFSVIMFVLHSF-----------------CDGIVLLNTP-----------VTSLGASGYICTILVLFGALNPNALIQIY------RTTSTAIKGLIKLGTAGLVMCWKFYHHAAHLGSTLFGI 129
            +WRI      I+R+YF + P   + C P+FLS+ SH   LH +  M+VLHSF                 C   V+ +             VTSLGASG +  IL       PNA +QI        +   AIK ++ +   GL   WK + HAAHLG  +FGI
Sbjct:  144 LWRIPYF-YPIMRKYFCASPALESSCLPMFLSTFSHYSFLHLAANMYVLHSFSTSAVSFFGKEQFLALYCSAGVISSFTSYLYKVATGRFVTSLGASGALMAILSSMCFQFPNAQLQIVFLPFFSFSAGHAIKAVMAIDLVGLFAKWKLFDHAAHLGGAIFGI 305
[Close]
BLAST of EMLSAG00000002780 vs. Select Arthropod Genomes
Match: EAA08059.4 (AGAP002626-PA [Anopheles gambiae str. PEST])

HSP 1 Score: 75.0998 bits (183), Expect = 3.528e-16
Identity = 51/163 (31.29%), Postives = 76/163 (46.63%), Query Frame = 0 
Query:    1 MWRIRCLKVSIIRRYFLSDPRSPNKCFPLFLSSLSHNLLLHFSVIMFVLHSFCDGIV----------------------------LLNTPVTSLGASGYICTILVLFGALNPNALIQI------YRTTSTAIKGLIKLGTAGLVMCWKFYHHAAHLGSTLFGI 129
            +WRI  L  ++++ YF S+P +   C+P+FLS+ SH  L H    M+VLHSF    V                            +   P  SLGASG I  IL    +  P+  + I        +   AIK ++ +  AG+++ W+ + HAAHLG  LFG+
Sbjct:  169 LWRIPSLAPTMVK-YFASNPAAKAVCWPMFLSTFSHYSLFHILANMYVLHSFSHAAVATLGREQFLGVYLSAGVIASFASHVFKTVTRQPGLSLGASGAIMGILAYVCSQYPDTQLSILFLPMYTFSAGAAIKVIMGIDLAGVLLGWRIFDHAAHLGGALFGL 330
[Close]
BLAST of EMLSAG00000002780 vs. Select Arthropod Genomes
Match: gb|EFA03514.2| (Presenilins-associated rhomboid-like protein, mitochondrial [Tribolium castaneum])

HSP 1 Score: 73.1738 bits (178), Expect = 1.900e-15
Identity = 55/162 (33.95%), Postives = 75/162 (46.30%), Query Frame = 0 
Query:    2 WRIRCLKVSIIRRYFLSDPRSPNKCFPLFLSSLSHNLLLHFSVIMFVLHSFCDGIV----------------------------LLNTPVTSLGASGYICTILVLFGALNPNA-----LIQIYR-TTSTAIKGLIKLGTAGLVMCWKFYHHAAHLGSTLFGI 129
            WRI  L+  +++ YF S+P S + C+P+ LS+ SH    H    M+VLHSF  G V                            +   P  SLGASG I  IL       P       L+ I+  +   AIK ++ + TAG++M WKF+ HAAHLG    GI
Sbjct:  153 WRIPRLQPFMLK-YFCSNPGSKSVCWPMILSTFSHYSGFHLLANMYVLHSFSTGAVHSLGKEQFLGLYLGAGVISSFTSYVYKVITKQPGLSLGASGAIMAILGYVCTQYPETKLGIILLPIFTFSAGAAIKVIVGIDTAGVLMGWKFFDHAAHLGGAACGI 313
[Close]
BLAST of EMLSAG00000002780 vs. Select Arthropod Genomes
Match: XP_016768326.1 (PREDICTED: presenilins-associated rhomboid-like protein, mitochondrial isoform X2 [Apis mellifera])

HSP 1 Score: 70.0922 bits (170), Expect = 7.750e-15
Identity = 56/162 (34.57%), Postives = 75/162 (46.30%), Query Frame = 0 
Query:    2 WRIRCLKVSIIRRYFLSDPRSPNKCFPLFLSSLSHNLLLHFSVIMFVLHSFCD------------------GIV------LLNTPV----TSLGASGYICTILVLFGALNPNALIQIYR------TTSTAIKGLIKLGTAGLVMCWKFYHHAAHLGSTLFGI 129
            W I   + ++ R YF S+P S N+C+P+   + SH  LLH  + M+VL+ FC                   G+V      L    V     SLGASG I  +L       PN  + I        T S+AIK ++ L T G +M W+   HAAHLG  LFGI
Sbjct:   29 WHIPAFRPTMYR-YFCSNPTS-NRCWPMLFVTFSHYSLLHLIINMYVLYDFCKIAVTELGREQFLALYLTSGVVSSFSSYLYKASVGIKDPSLGASGAIMGVLGFVCTQFPNVYLSIVFLPMLKFTASSAIKAVMGLDTVGCLMRWQRLDHAAHLGGALFGI 188
[Close]
BLAST of EMLSAG00000002780 vs. Select Arthropod Genomes
Match: XP_395657.3 (PREDICTED: presenilins-associated rhomboid-like protein, mitochondrial isoform X1 [Apis mellifera])

HSP 1 Score: 69.707 bits (169), Expect = 1.180e-14
Identity = 56/162 (34.57%), Postives = 75/162 (46.30%), Query Frame = 0 
Query:    2 WRIRCLKVSIIRRYFLSDPRSPNKCFPLFLSSLSHNLLLHFSVIMFVLHSFCD------------------GIV------LLNTPV----TSLGASGYICTILVLFGALNPNALIQIYR------TTSTAIKGLIKLGTAGLVMCWKFYHHAAHLGSTLFGI 129
            W I   + ++ R YF S+P S N+C+P+   + SH  LLH  + M+VL+ FC                   G+V      L    V     SLGASG I  +L       PN  + I        T S+AIK ++ L T G +M W+   HAAHLG  LFGI
Sbjct:   47 WHIPAFRPTMYR-YFCSNPTS-NRCWPMLFVTFSHYSLLHLIINMYVLYDFCKIAVTELGREQFLALYLTSGVVSSFSSYLYKASVGIKDPSLGASGAIMGVLGFVCTQFPNVYLSIVFLPMLKFTASSAIKAVMGLDTVGCLMRWQRLDHAAHLGGALFGI 206
[Close]
BLAST of EMLSAG00000002780 vs. Select Arthropod Genomes
Match: EEB10902.1 (conserved hypothetical protein [Pediculus humanus corporis])

HSP 1 Score: 56.9954 bits (136), Expect = 1.042e-9
Identity = 43/162 (26.54%), Postives = 74/162 (45.68%), Query Frame = 0 
Query:    2 WRIRCLKVSIIRRYFLSDPRSPNKCFPLFLSSLSHNLLLHFSVIMFVLHSFCD------------GIVLLNTPVT----------------SLGASGYICTILVLFGALNPNA------LIQIYRTTSTAIKGLIKLGTAGLVMCWKFYHHAAHLGSTLFGI 129
            W+++  +  +I+ YF S P +   C+P+ LS+ SH    H +  M+VL+SF              G+ L    ++                S+GASG I  ++       P+A      L  I  + ++ IK ++ L   G++  W ++ HAAHLG +L G+
Sbjct:  161 WKVKKFQPFMIK-YFCSSPFNEAVCWPMILSTFSHYSFFHLAANMYVLYSFSTSGVEDLGKEQFLGLYLAGAVISSFTSYLYKICRSQHTLSIGASGAIMAMVAYVCVKYPDAKLSIILLPWIVFSAASGIKIIMSLDVLGILRGWAYFDHAAHLGGSLCGL 321
[Close]
BLAST of EMLSAG00000002780 vs. nr
Match: gi|1042298693|ref|XP_017345675.1| (PREDICTED: presenilins-associated rhomboid-like protein, mitochondrial [Ictalurus punctatus])

HSP 1 Score: 90.5077 bits (223), Expect = 4.119e-19
Identity = 59/163 (36.20%), Postives = 77/163 (47.24%), Query Frame = 0 
Query:    2 WRIRCLKVSIIRRYFLSDPRSPNKCFPLFLSSLSHNLLLHFSVIMFVLHSFCDGIV----------------------------LLNTPVTSLGASGYICTILVLFGALNPNALIQIY------RTTSTAIKGLIKLGTAGLVMCWKFYHHAAHLGSTLFGIW 130
            WRI  L+ S+++ YF S+P S  +C+P+ LSS SH    H +  M+VL SF    V                            L      SLGASG I T+L       P A + I        T   A+K ++ L TAGL+M W+F+ HAAHLG  LFGIW
Sbjct:  161 WRIPSLQRSMLK-YFTSNPTSSARCWPMLLSSFSHYSFFHMAANMYVLWSFSSSAVSMMGKEQFVAVYLSAGVISSFASYVCKTLTGRMGPSLGASGAIMTVLAAVCTKMPEAKLAIVFLPMYTFTAGNALKAIVALDTAGLIMGWRFFDHAAHLGGALFGIW 322
[Close]
BLAST of EMLSAG00000002780 vs. nr
Match: gi|558107630|ref|XP_006084925.1| (PREDICTED: presenilins-associated rhomboid-like protein, mitochondrial isoform X1 [Myotis lucifugus])

HSP 1 Score: 90.8929 bits (224), Expect = 4.229e-19
Identity = 59/164 (35.98%), Postives = 82/164 (50.00%), Query Frame = 0 
Query:    1 MWRIRCLKVSIIRRYFLSDPRSPNKCFPLFLSSLSHNLLLHFSVIMFVLHSFCDGIV----------------LLNTPVT------------SLGASGYICTILVLFGALNPNALIQIYR------TTSTAIKGLIKLGTAGLVMCWKFYHHAAHLGSTLFGIW 130
            +WR+  L+  +IR YF S+P S   C P+ LS+ SH  L H +  M+VL SF   IV                +++  V+            SLGASG I T+L       P+  + I        T  TA+K +I + TAG+++ WKF+ HAAHLG  LFGIW
Sbjct:  208 LWRVPSLQRGMIR-YFTSNPASKVLCSPMLLSTFSHFSLFHMAANMYVLWSFSSSIVNILGQEQFMAVYLSAGVISNFVSYVCKVATGRYGPSLGASGAIMTVLAAVCTKIPDGRLAIIFLPMFTFTAGTALKAIIAMDTAGMILGWKFFDHAAHLGGALFGIW 370
[Close]
BLAST of EMLSAG00000002780 vs. nr
Match: gi|1049285128|ref|XP_017539085.1| (PREDICTED: presenilins-associated rhomboid-like protein, mitochondrial [Pygocentrus nattereri])

HSP 1 Score: 90.5077 bits (223), Expect = 4.603e-19
Identity = 61/163 (37.42%), Postives = 83/163 (50.92%), Query Frame = 0 
Query:    2 WRIRCLKVSIIRRYFLSDPRSPNKCFPLFLSSLSHNLLLHFSVIMFVLHSFCDGIV----------------LLNTPVT------------SLGASGYICTILVLFGALNPNALIQI------YRTTSTAIKGLIKLGTAGLVMCWKFYHHAAHLGSTLFGIW 130
            WRI  L+ +++R YF S+P S   C+P+ LS+ SH  L H +  M+VL SF   IV                +++T V+            SLGASG I T+L       P A + I        T   A+K ++ L TAGL+M W+F+ HAAHLG  LFGIW
Sbjct:  169 WRIPYLQRTMVR-YFTSNPASKTLCWPMLLSTFSHYSLFHMAANMYVLWSFSSSIVNMMGREQFLAMYLSAGVISTFVSYVCKTATGRLGPSLGASGAIMTVLAAVCTKMPEAKLAIIFLPMYTFTAGNALKTIVALDTAGLIMGWRFFDHAAHLGGALFGIW 330
[Close]
BLAST of EMLSAG00000002780 vs. nr
Match: gi|831299711|ref|XP_012681777.1| (PREDICTED: presenilins-associated rhomboid-like protein, mitochondrial [Clupea harengus])

HSP 1 Score: 90.5077 bits (223), Expect = 5.723e-19
Identity = 58/163 (35.58%), Postives = 85/163 (52.15%), Query Frame = 0 
Query:    2 WRIRCLKVSIIRRYFLSDPRSPNKCFPLFLSSLSHNLLLHFSVIMFVLHSFCDGIV----------------LLNTPVT------------SLGASGYICTILVLFGALNPNALIQIYR------TTSTAIKGLIKLGTAGLVMCWKFYHHAAHLGSTLFGIW 130
            WRI  L+ S+++ YF S+P S  +C P+ LSS SH  ++H +V M+VL +F   IV                +++T ++            SLGASG I T+L       P A + I        T  +A+K L+ + TAGLV+ W+ + HAAHLG  LFG+W
Sbjct:  191 WRIPSLQRSMLK-YFTSNPASKTRCLPMVLSSFSHYSIIHMAVNMYVLWTFSTTIVSILGREQFLAFYASAGVISTMISYICKTASGRLHPSLGASGAIMTVLAAVCTKMPEAKLAIVLLPMFSLTAGSALKALVAIDTAGLVLGWRIFDHAAHLGGALFGVW 352
[Close]
BLAST of EMLSAG00000002780 vs. nr
Match: gi|1040212645|gb|OBS70585.1| (hypothetical protein A6R68_00868 [Neotoma lepida])

HSP 1 Score: 88.1965 bits (217), Expect = 8.480e-19
Identity = 59/152 (38.82%), Postives = 78/152 (51.32%), Query Frame = 0 
Query:    1 MWRIRCLKVSIIRRYFLSDPRSPNKCFPLFLSSLSHNLLLHFSVIMFVLHSFCDGIV-----------LLNTPVT-----SLGASGYICTILVLFGALNPNALIQI------YRTTSTAIKGLIKLGTAGLVMCWKFYHHAAHLGSTLFGIW 130
            +WR+  L  ++IR YF S+P S   C P+ LS+ SH  L H +  M+VL SF   IV            L+   T     SLGASG I T+L       P   + I        T   A+K +I + TAG+++ WKF+ HAAHLG  LFGIW
Sbjct:   67 LWRVPSLHRTMIR-YFTSNPASKVLCSPMLLSTFSHFSLFHMAANMYVLWSFSSSIVNILGQEQFVAVYLSAVATGRYGPSLGASGAIMTVLAAVCTKIPEGRLAIIFLPVFTFTAGNALKAIIAMDTAGMILGWKFFDHAAHLGGALFGIW 217
[Close]
BLAST of EMLSAG00000002780 vs. nr
Match: gi|348582666|ref|XP_003477097.1| (PREDICTED: presenilins-associated rhomboid-like protein, mitochondrial [Cavia porcellus])

HSP 1 Score: 89.3521 bits (220), Expect = 1.487e-18
Identity = 62/164 (37.80%), Postives = 82/164 (50.00%), Query Frame = 0 
Query:    1 MWRIRCLKVSIIRRYFLSDPRSPNKCFPLFLSSLSHNLLLHFSVIMFVLHSFCDGIV-----------LLNTPV-----------------TSLGASGYICTILVLFGALNPNALIQI------YRTTSTAIKGLIKLGTAGLVMCWKFYHHAAHLGSTLFGIW 130
            +WR+  L+ ++IR YF S+P S   C P+ LSS SH  LLH +  M+VL SF   IV            L+  V                  SLGASG I T+L       P+  + I        T  +A+K +I L TAG+++ WKF+ HAAHLG  LFGIW
Sbjct:  182 LWRVPSLQRTMIR-YFTSNPASKVLCAPMLLSSFSHFSLLHMAANMYVLWSFSSSIVNILGQEQFMAVYLSAGVISNFVSYVCKVATGRYGPSLGASGAIMTVLAAVCTKVPDGRLAIIFLPMLTFTAGSALKAIIALDTAGMILGWKFFDHAAHLGGALFGIW 344
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BLAST of EMLSAG00000002780 vs. nr
Match: gi|620941848|ref|XP_007671402.1| (PREDICTED: presenilins-associated rhomboid-like protein, mitochondrial [Ornithorhynchus anatinus])

HSP 1 Score: 87.8113 bits (216), Expect = 1.558e-18
Identity = 59/164 (35.98%), Postives = 83/164 (50.61%), Query Frame = 0 
Query:    1 MWRIRCLKVSIIRRYFLSDPRSPNKCFPLFLSSLSHNLLLHFSVIMFVLHSFCDGIV----------------LLNTPVT------------SLGASGYICTILVLFGALNPNALIQI------YRTTSTAIKGLIKLGTAGLVMCWKFYHHAAHLGSTLFGIW 130
            +WR+  L+ S+I+ YF S+P S   C P+ LS+ SH  L H +  M+VL SF   IV                +++T V+            SLGASG I T+L       P + + I        T   A+K +I + TAG+++ WKF+ HAAHLG  LFGIW
Sbjct:   74 LWRVPSLQRSMIK-YFTSNPASKTLCSPMLLSTFSHFSLFHMAANMYVLWSFSSSIVNILGREQFMAVYLSAGVISTFVSYVSKVVTGRFGPSLGASGAIMTVLAAVCTKLPESKLAIIILPMFTFTAGNALKAIIAMDTAGMILGWKFFDHAAHLGGALFGIW 236
[Close]
BLAST of EMLSAG00000002780 vs. nr
Match: gi|929071140|ref|XP_014044788.1| (PREDICTED: presenilins-associated rhomboid-like protein, mitochondrial isoform X2 [Salmo salar])

HSP 1 Score: 89.3521 bits (220), Expect = 1.710e-18
Identity = 53/163 (32.52%), Postives = 82/163 (50.31%), Query Frame = 0 
Query:    2 WRIRCLKVSIIRRYFLSDPRSPNKCFPLFLSSLSHNLLLHFSVIMFVLHSFCDGIV----------------LLNTPVT------------SLGASGYICTILVLFGALNPNA------LIQIYRTTSTAIKGLIKLGTAGLVMCWKFYHHAAHLGSTLFGIW 130
            WRI  ++ S+++ YF ++P S  +C P+ LS+ SH  ++H +  M+VL +F   IV                +++T V+            SLGASG I T+L       P A      L  +  T   A+K ++ +  AGL+M W+ + HAAHLG  LFG+W
Sbjct:  195 WRIPSMQRSMVK-YFTANPASKTRCLPMLLSTFSHYSIIHMAANMYVLWTFSSSIVSLLGKEQFLAVYLSAGVISTMVSYVCKTSTGRLHPSLGASGAIMTVLAAVCTKMPEAKLGIILLPMVSFTAGNALKAIVAMDAAGLIMGWRLFDHAAHLGGALFGVW 356
[Close]
BLAST of EMLSAG00000002780 vs. nr
Match: gi|909787592|ref|XP_013150598.1| (PREDICTED: presenilins-associated rhomboid-like protein, mitochondrial isoform X2 [Falco peregrinus] >gi|929468067|ref|XP_014137492.1| PREDICTED: presenilins-associated rhomboid-like protein, mitochondrial isoform X2 [Falco cherrug])

HSP 1 Score: 85.1149 bits (209), Expect = 3.218e-18
Identity = 57/143 (39.86%), Postives = 73/143 (51.05%), Query Frame = 0 
Query:   11 IIRRYFLSDPRSPNKCFPLFLSSLSHNLLLHFSVIMFVLHSFCDGIV-----LLNTPVT------------SLGASGYICTILVLFGALNPNALIQI------YRTTSTAIKGLIKLGTAGLVMCWKFYHHAAHLGSTLFGIW 130
            I+  YF SDP S   C P+ LS+ SH  L H +  M+VL SF   IV     +++T V+            SLGASG I T+L    A  P A + I        T   A+K +I   TAGL + W+ + HAAHLG  LFGIW
Sbjct:    4 IMFTYFTSDPSSRALCSPMLLSTFSHFSLFHMAANMYVLWSFSSSIVSLLGWVISTFVSYVAKMATGRFEPSLGASGAIMTVLAAVCAKMPEAKLAIIFLPMFTFTAGNALKAIIAFDTAGLALGWRLFDHAAHLGGALFGIW 146
[Close]
BLAST of EMLSAG00000002780 vs. nr
Match: gi|657574084|ref|XP_008290734.1| (PREDICTED: presenilins-associated rhomboid-like protein, mitochondrial [Stegastes partitus])

HSP 1 Score: 88.1965 bits (217), Expect = 3.874e-18
Identity = 56/163 (34.36%), Postives = 81/163 (49.69%), Query Frame = 0 
Query:    2 WRIRCLKVSIIRRYFLSDPRSPNKCFPLFLSSLSHNLLLHFSVIMFVLHSFCDGIV----------------LLNTPVT------------SLGASGYICTILVLFGALNPNA------LIQIYRTTSTAIKGLIKLGTAGLVMCWKFYHHAAHLGSTLFGIW 130
            WRI  ++ S+I+ YF S+P S  +C P+ LSS SH  ++H    M+VL +F  GIV                +++T V+            SLGASG +  +L    A  P A      L  +  T    +K L+ +  AGL+M W+ + HAAHLG  LFG+W
Sbjct:  185 WRIPSMQRSMIK-YFTSNPASKTRCLPMVLSSFSHYSIIHMVANMYVLWTFSSGIVSLLGKEQFLAVYMSAGVISTMVSYMCKTATGRLYPSLGASGAVMAVLAAVCAKVPEAKLGIIFLPMVTITAGNVLKALVAVDAAGLLMGWRLFDHAAHLGGALFGVW 346
[Close]
BLAST of EMLSAG00000002780 vs. Tigriopus kingsejongenis genes
Match: snap_masked-scaffold443_size169656-processed-gene-0.9 (protein:Tk07434 transcript:snap_masked-scaffold443_size169656-processed-gene-0.9-mRNA-1 annotation:"presenilin rhomboid-like preproprotein")

HSP 1 Score: 95.9005 bits (237), Expect = 7.383e-25
Identity = 59/163 (36.20%), Postives = 85/163 (52.15%), Query Frame = 0 
Query:    2 WRIRCLKVSIIRRYFLSDPRSPNKCFPLFLSSLSHNLLLHFSVIMFVLHSFCD-GIVLLNTPV---------------------------TSLGASGYICTILVLFGALNPNALIQIY------RTTSTAIKGLIKLGTAGLVMCWKFYHHAAHLGSTLFGIW 130
            WR+  L+  +++ YF S+P S   C P+ LS  SH+   H +  M+VL+ F   G+ +L                                SLGASG ICT+L +FG + P+A +QI        + S AIKGL+ + TAG++M W+F+ HAAHLG  +FGIW
Sbjct:  168 WRVPMLQPFMLK-YFTSNPASSVVCLPMILSVFSHSSFFHLAANMYVLNGFMKPGVQILGLEQFLAVYMSAGVVSSLASMAYKVSTGRIGYSLGASGAICTVLGIFGTMFPDARMQIVFIPAFTFSASMAIKGLMAVDTAGIIMNWRFFDHAAHLGGVVFGIW 329
The following BLAST results are available for this feature:
BLAST of EMLSAG00000002780 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO)
Total hits: 17
Match NameE-valueIdentityDescription
-1.615e-1935.98symbol:PARL "Presenilins-associated rhomboid-like ... [more]
-5.146e-1934.36symbol:parla "presenilin associated, rhomboid-like... [more]
-5.670e-1935.98symbol:PARL "Presenilins-associated rhomboid-like ... [more]
-5.951e-1935.98symbol:Parl "presenilin associated, rhomboid-like"... [more]
-6.152e-1935.98symbol:PARL "Uncharacterized protein" species:9615... [more]
-2.173e-1835.98symbol:Parl "Presenilins-associated rhomboid-like ... [more]
-2.173e-1835.98symbol:Parl "presenilin associated, rhomboid-like"... [more]
-3.205e-1734.36symbol:rho-7 "rhomboid-7" species:7227 "Drosophila... [more]
-3.481e-1533.12symbol:PARL "Uncharacterized protein" species:9031... [more]
-3.650e-1335.25symbol:Parl "Presenilins-associated rhomboid-like ... [more]

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BLAST of EMLSAG00000002780 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA)
Total hits: 1
Match NameE-valueIdentityDescription
gi|592776506|gb|GAXK01178062.1|2.551e-1133.33TSA: Calanus finmarchicus comp15387_c0_seq1 transc... [more]
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BLAST of EMLSAG00000002780 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self)
Total hits: 2
Match NameE-valueIdentityDescription
EMLSAP000000027802.824e-91100.00pep:novel supercontig:LSalAtl2s:LSalAtl2s1607:2268... [more]
EMLSAP000000088661.204e-2752.10pep:novel supercontig:LSalAtl2s:LSalAtl2s553:52741... [more]
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BLAST of EMLSAG00000002780 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt)
Total hits: 6
Match NameE-valueIdentityDescription
gi|110287782|sp|Q2KHV4.1|PARL_BOVIN6.668e-2035.98RecName: Full=Presenilins-associated rhomboid-like... [more]
gi|62511102|sp|Q5R5H4.1|PARL_PONAB2.031e-1935.98RecName: Full=Presenilins-associated rhomboid-like... [more]
gi|82178438|sp|Q58EK4.1|PARL_DANRE2.043e-1934.36RecName: Full=Presenilins-associated rhomboid-like... [more]
gi|143811433|sp|Q9H300.2|PARL_HUMAN2.292e-1935.98RecName: Full=Presenilins-associated rhomboid-like... [more]
gi|62511107|sp|Q5XJY4.1|PARL_MOUSE2.427e-1935.98RecName: Full=Presenilins-associated rhomboid-like... [more]
gi|118582201|sp|Q3B8P0.1|PARL_RAT8.719e-1935.98RecName: Full=Presenilins-associated rhomboid-like... [more]
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BLAST of EMLSAG00000002780 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods)
Total hits: 9
Match NameE-valueIdentityDescription
EFX76957.18.957e-2034.57hypothetical protein DAPPUDRAFT_306013 [Daphnia pu... [more]
AHN56122.14.277e-1834.36rhomboid-7, isoform B [Drosophila melanogaster][more]
AAF58598.14.277e-1834.36rhomboid-7, isoform A [Drosophila melanogaster][more]
gb|KFM82176.1|7.451e-1734.36Presenilins-associated rhomboid-like protein, mito... [more]
EAA08059.43.528e-1631.29AGAP002626-PA [Anopheles gambiae str. PEST][more]
gb|EFA03514.2|1.900e-1533.95Presenilins-associated rhomboid-like protein, mito... [more]
XP_016768326.17.750e-1534.57PREDICTED: presenilins-associated rhomboid-like pr... [more]
XP_395657.31.180e-1434.57PREDICTED: presenilins-associated rhomboid-like pr... [more]
EEB10902.11.042e-926.54conserved hypothetical protein [Pediculus humanus ... [more]
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BLAST of EMLSAG00000002780 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017))
Total hits: 25
Match NameE-valueIdentityDescription
gi|1042298693|ref|XP_017345675.1|4.119e-1936.20PREDICTED: presenilins-associated rhomboid-like pr... [more]
gi|558107630|ref|XP_006084925.1|4.229e-1935.98PREDICTED: presenilins-associated rhomboid-like pr... [more]
gi|1049285128|ref|XP_017539085.1|4.603e-1937.42PREDICTED: presenilins-associated rhomboid-like pr... [more]
gi|831299711|ref|XP_012681777.1|5.723e-1935.58PREDICTED: presenilins-associated rhomboid-like pr... [more]
gi|1040212645|gb|OBS70585.1|8.480e-1938.82hypothetical protein A6R68_00868 [Neotoma lepida][more]
gi|348582666|ref|XP_003477097.1|1.487e-1837.80PREDICTED: presenilins-associated rhomboid-like pr... [more]
gi|620941848|ref|XP_007671402.1|1.558e-1835.98PREDICTED: presenilins-associated rhomboid-like pr... [more]
gi|929071140|ref|XP_014044788.1|1.710e-1832.52PREDICTED: presenilins-associated rhomboid-like pr... [more]
gi|909787592|ref|XP_013150598.1|3.218e-1839.86PREDICTED: presenilins-associated rhomboid-like pr... [more]
gi|657574084|ref|XP_008290734.1|3.874e-1834.36PREDICTED: presenilins-associated rhomboid-like pr... [more]

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BLAST of EMLSAG00000002780 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins)
Total hits: 1
Match NameE-valueIdentityDescription
snap_masked-scaffold443_size169656-processed-gene-0.97.383e-2536.20protein:Tk07434 transcript:snap_masked-scaffold443... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s1607supercontigLSalAtl2s1607:22684..23168 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Blast vs. GO2014-04-02
TblastN vs C. finmarchicus TSA2014-05-09
Blastp vs. self2014-05-10
Blastp vs. SwissProt2017-02-10
Blastp vs. Selected Arthropods2017-02-20
Blastp vs. NR (2/2017)2017-02-20
Blastp vs. Tigriopus kingsejongensis proteins2018-04-18
Properties
Property NameValue
Logic nameensemblgenomes
Descriptionmaker-LSalAtl2s1607-snap-gene-0.0
Biotypeprotein_coding
EvidenceIEA
NotePresenilins-associated rhomboid-like protein, mitochondrial
Cross References
External references for this gene
DatabaseAccession
Ensembl Metazoa (gene)EMLSAG00000002780 (primary cross-reference)
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
EMLSAT00000002780EMLSAT00000002780-698627Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at LSalAtl2s1607:22684..23168+

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAG00000002780-685546 ID=EMLSAG00000002780-685546|Name=EMLSAG00000002780|organism=Lepeophtheirus salmonis|type=gene|length=485bp|location=Sequence derived from alignment at LSalAtl2s1607:22684..23168+ (Lepeophtheirus salmonis)
ATGTGGCGGATTCGTTGCTTGAAAGTAAGCATAATCCGTCGATATTTTTT
ATCAGATCCACGTTCTCCAAATAAGTGTTTTCCACTTTTTCTATCAAGCT
TAAGTCACAACTTACTGCTTCATTTTTCTGTGATTATGTTTGTACTTCAT
TCATTTTGTGATGGAATAGTTCCTGCCCTATAAAAAGAGCAATTTGTGGG
GGTATACCATACCACTAGGGTTGTATCTGGTTTTATACCATTAGTTACCA
AGGTTTTATTAAATACACCTGTTACGTCCCTCGGAGCTTCAGGCTACATA
TGTACTATTTTGGTTCTCTTTGGGGCTCTTAATCCAAATGCACTAATTCA
GATAGTTTTTAGTACAGGACTACCAGTACTGCCATTAAAGGATTGATTAA
ATTGGGCACTGCAGGATTGGTAATGTGTTGGAAATTTTATCACCATGCTG
CACATTTAGGCAGCACTCTTTTTGGTATTTGGTAG
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