EMLSAG00000003001, EMLSAG00000003001-685767 (gene) Lepeophtheirus salmonis

Overview
NameEMLSAG00000003001
Unique NameEMLSAG00000003001-685767
Typegene
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Homology
BLAST of EMLSAG00000003001 vs. C. finmarchicus
Match: gi|592883399|gb|GAXK01074976.1| (TSA: Calanus finmarchicus comp275195_c0_seq2 transcribed RNA sequence)

HSP 1 Score: 310.071 bits (793), Expect = 1.253e-91
Identity = 198/557 (35.55%), Postives = 320/557 (57.45%), Query Frame = 0
Query:   21 ILAEEIGSLTLLTDFNPKKIVILHSTLASLNEDGSKLLLGEIRSRGEGEWSLGGRSYTLID---KLNEKKYLDLALLPGSKG-TKIVFLAERIKNKERLL-VAHNITHGKVLELGEEYAFYDKANVLGKGVSHITPDLVSGESSPPTIYSASNLIRKLHIEDNAL--KPTPARAQVLQECLDGTIALTIQXXXXXXXXNFLVGAFRTKSATKNKFMIEWYLSNNKKDDIVCCKSPVKFSEDCEPLYLLTDPKDPRTVYTLCKTGPNQN-SLYKLTKGLSKKDEDPLLIIPGVIEGAAIGITGDDVSTLLIYDGSSCSARLFSLSKSEGFRGRHPICAHCPNLEKFXXXXXXXXXXXPNQKWQIA---CNVLGANVNNYQICLASLLDESGKFGIEPETGLPYRIRLLGCETQGVHAEIMLLEDLSRTFENAEDKLSNYVLKLCINFSPCRECQSHLSGWLMSGKLANIELHYVQSGEIIQDFGDRFVAKSISMDRFKTLLTDTDWSQMNGGMGGRQGTFTKGDEVSSTSSPLVRSISGRSP--RSSMTPGSRIPTRS 564
            ++ EEIG +++    +PK +    + ++ L+E+ +++ L E+R R + +  L  R Y+ +D     ++K+YLD+ +L  S    ++  L ER KNKER + +   IT G+ L LG+E A YDKA++LGKG+SHI     +G+     ++   N++RK+ +EDN L  KPT  R  +  EC+DGTI++ + SS +K   + ++ +FRTKSA KNK+ I W+   N +  +   KS +K SE+ EP  +L DP+D R +Y +C +G +Q+ SLYKL +G  +K E+P+   P     A      D    LL+ + SS + ++F L K+EGFRG+    + C  L+      H +SC+    +WQ+     +++ +    YQ+ LA+LL  +G    EPE+G  YR+R++G + Q     +++L+DL R+FE+ ED LS+  LK+C+N SP RE  S LS WLM+G+LA++E+   +         DR V +++S D  ++ L D DWSQ       R+GTF       S ++P   SI   +P  + S+ P SR  +R+
Sbjct:  959 LVLEEIGQISVSEAVSPKSVRSSGNYISILSEE-TQVFLAEVRLRADSD-CLAPR-YSFLDLPGIEDKKRYLDITILATSPADVRLALLGER-KNKERFVCIIEVITSGRGLSLGKELATYDKASMLGKGLSHIVSCNWTGKVGEGDVFVVGNILRKMKVEDNGLVLKPTSGRVPIPPECMDGTISICVASSVNKKGFS-VISSFRTKSAGKNKYQINWFQGRNDEISVPAGKSSLKLSEEQEPAVILADPRDARAIYLICNSGSDQSASLYKLVRG--RKLEEPIFTFPFQASEAVFVAGADKNLFLLVLEASSLNLKVFHLMKTEGFRGQQAAWSACNELQGIVPSFHAVSCA--QHRWQLQPALADIVLSYRCPYQLALATLLTGNGDIATEPESGSHYRLRVMGGDQQN-DVILIVLDDLERSFESEEDALSSMTLKMCMNSSPGREGMSQLSAWLMAGRLASVEIQCTRLENECMSGSDRMVVQTVSTDTVRSFLVDQDWSQRT----KREGTFVLDSPEGSPTTP--SSIRTSTPIKKPSLEPQSRSSSRT 2581          
BLAST of EMLSAG00000003001 vs. C. finmarchicus
Match: gi|592883400|gb|GAXK01074975.1| (TSA: Calanus finmarchicus comp275195_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 303.523 bits (776), Expect = 3.328e-89
Identity = 187/531 (35.22%), Postives = 312/531 (58.76%), Query Frame = 0
Query:   21 ILAEEIGSLTLLTDFNPKKIVILHSTLASLNEDGSKLLLGEIRSRGEGEWSLGGRSYTLID---KLNEKKYLDLALLPGSKG-TKIVFLAERIKNKERLL-VAHNITHGKVLELGEEYAFYDKANVLGKGVSHITPDLVSGESSPPTIYSASNLIRKLHIEDN--ALKPTPARAQVLQECLDGTIALTIQXXXXXXXXNFLVGAFRTKSATKNKFMIEWYLSNNKKDDIVCCKSPVKFSEDCEPLYLLTDPKDPRTVYTLCKTGPNQN-SLYKLTKGLSKKDEDPLLIIPGVIEGAAIGITGDDVSTLLIYDGSSCSARLFSLSKSEGFRGRHPICAHCPNLEKFXXXXXXXXXXXPNQKWQIA---CNVLGANVNNYQICLASLLDESGKFGIEPETGLPYRIRLLGCETQGVHAEIMLLEDLSRTFENAEDKLSNYVLKLCINFSPCRECQSHLSGWLMSGKLANIELHYVQSGEIIQDFGDRFVAKSISMDRFKTLLTDTDWSQMNGGMGGRQGTFTKGDEVSSTSSP 540
            ++ EEIG +++    +PK +    + ++ L+E+ +++ L E+R R + +  L  R Y+ +D     ++K+YLD+ +L  S    ++  L ER KNKER + +   IT G+ L LG+E A YDKA++LGKG+SHI     +G+     ++   N++RK+ +EDN   LKPT  R  +  EC+DGTI++ + SS +K   + ++ +FRTKSA KNK+ I W+   N +  +   KS +K SE+ EP  +L DP+D R +Y +C +G +Q+ SLYKL +G  +K E+P+   P     A      D    LL+ + SS + ++F L K+EGFRG+    + C  L+      H +SC+    +WQ+     +++ +    YQ+ LA+LL  +G    EPE+G  YR+R++G + Q     +++L+DL R+FE+ ED LS+  LK+C+N SP RE  S LS WLM+G+LA++E++ ++  + +    +R + ++I  +  ++ L + DW+Q       R+GTF      SS+S+P
Sbjct:  959 LVLEEIGQISVSEAVSPKSVRSSGNYISILSEE-TQVFLAEVRLRADSD-CLAPR-YSFLDLPGIEDKKRYLDITILATSPADVRLALLGER-KNKERFVCIIEVITSGRGLSLGKELATYDKASMLGKGLSHIVSCNWTGKVGEGDVFVVGNILRKMKVEDNGLVLKPTSGRVPIPPECMDGTISICVASSVNKKGFS-VISSFRTKSAGKNKYQINWFQGRNDEISVPAGKSSLKLSEEQEPAVILADPRDARAIYLICNSGSDQSASLYKLVRG--RKLEEPIFTFPFQASEAVFVAGADKNLFLLVLEASSLNLKVFHLMKTEGFRGQQAAWSACNELQGIVPSFHAVSCA--QHRWQLQPALADIVLSYRCPYQLALATLLTGNGDIATEPESGSHYRLRVMGGDQQN-DVILIVLDDLERSFESEEDALSSMTLKMCMNSSPGREGMSQLSAWLMAGRLASVEINCIKLDKNVASSSERILIQTIQPETLRSFLVEQDWTQST----KREGTFVLDQPESSSSTP 2509          
BLAST of EMLSAG00000003001 vs. C. finmarchicus
Match: gi|592853628|gb|GAXK01103916.1| (TSA: Calanus finmarchicus comp1171965_c0_seq2 transcribed RNA sequence)

HSP 1 Score: 290.426 bits (742), Expect = 1.328e-86
Identity = 204/556 (36.69%), Postives = 317/556 (57.01%), Query Frame = 0
Query:   21 ILAEEIGSLTLLTDFNPKKIVILHSTLASLNEDGSKLLLGEIRSRGEGEWSLGGRSY-TLIDKLNEKKYLDLALLP-GSKGTKIVFLAERIKNKERLL-VAHNITHGKVLELGEEYAFYDKANVLGKGVSHITPDLVSGESSPPTIYSASNLIRKLHIEDNA--LKPTPARAQVLQECLDGTIALTIQXXXXXXXXNFLVGAFRTKSATKNKFMIEWYLSNNKKDDIVCCKSPVKFSEDCEPLYLLTDPKDPRTVYTLCKTGPNQN-SLYKLTKGLSKKDEDPLLIIPGVIEGAAIGITGDDVST-LLIYDGSSCSARLFSLSKSEGFRGRHPICAHCPNLEKFXXXXXXXXXXXPNQKWQIA---CNVLGANVNNYQICLASLLDESGKFGIEPETGLPYRIRLLGCETQGVHAEIMLLEDLSRTFENAEDKLSNYVLKLCINFSPCRECQSHLSGWLMSGKLANIELHYVQSGEIIQDFG-DRFVAKSISMDRFKTLLTDTDWSQMNGGMGGRQGTFTKGDEVSSTSSPL-VRS---ISGRSPRSSMTPGSRIP 561
            ++ EEIG +++      K +    + + +L+ + S++ + E R + + + +   ++   L    +EK+YLD+ +   GS   ++  L ER KNKER + +   +T G+   LG+E A YDKA++LGKG+SHI     SG      ++   N++RKL +E+N   LKPT  R  V  ECLDGTI++ + SS++K   + ++ +FRTKSA KNK+ I W+   N +  +   KS +K SE+ EP  +L +P+D R ++ +C    +Q  +L+KL +G  +K  DP+      +  A I I+G D    LL  D SS S ++F L+K+EGFRG+    + CP L   S   H +SCS    +WQ+     ++L ++   YQ+ LA+LL   G    EPETGLPYR+R++G + Q     I+LL+DL RTFE+ ED LS+  LK+C+N SP RE  S +S WLM+G+LA++E   +QS  +    G +R V +++  D  ++ L DTDW+Q       R+ TF        +S+P  +RS   IS R+P       SRIP
Sbjct:   73 LIIEEIGQISIGEASQAKSVSSSENYICALSGE-SQIFVIEARLKSDSDCAASRKALLDLPGVQDEKRYLDVTIFSTGSGDVRLALLGER-KNKERFVSILELLTVGRSFGLGKELAVYDKASMLGKGLSHIV-SCWSGLVGEADVFVCGNILRKLKVEENGSVLKPTTGRVPVPPECLDGTISVCVASSTNKKGFS-VICSFRTKSAGKNKYQINWFQGRNDEISVPAGKSFLKLSEEQEPTVILANPRDSRAIFLVCNNSSDQTATLHKLVRG--RKLSDPIFTFTFPVSDA-IFISGVDKDLFLLALDCSSQSLKVFHLNKTEGFRGQESTWSACPELAAISPSFHAVSCS--QHRWQLQPTLADILLSDRCPYQVGLATLLTAGGDIATEPETGLPYRLRVMGGDQQN-DVIIILLDDLERTFESEEDALSSMTLKMCMNSSPGREGLSQISAWLMAGRLASVE---IQSSRLETVSGSERMVLQALHTDTLRSFLVDTDWTQST----KREATFLLDSTERPSSTPANIRSSTPISRRTPVELQPSRSRIP 1689          
BLAST of EMLSAG00000003001 vs. C. finmarchicus
Match: gi|592853629|gb|GAXK01103915.1| (TSA: Calanus finmarchicus comp1171965_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 290.426 bits (742), Expect = 1.386e-86
Identity = 204/556 (36.69%), Postives = 317/556 (57.01%), Query Frame = 0
Query:   21 ILAEEIGSLTLLTDFNPKKIVILHSTLASLNEDGSKLLLGEIRSRGEGEWSLGGRSY-TLIDKLNEKKYLDLALLP-GSKGTKIVFLAERIKNKERLL-VAHNITHGKVLELGEEYAFYDKANVLGKGVSHITPDLVSGESSPPTIYSASNLIRKLHIEDNA--LKPTPARAQVLQECLDGTIALTIQXXXXXXXXNFLVGAFRTKSATKNKFMIEWYLSNNKKDDIVCCKSPVKFSEDCEPLYLLTDPKDPRTVYTLCKTGPNQN-SLYKLTKGLSKKDEDPLLIIPGVIEGAAIGITGDDVST-LLIYDGSSCSARLFSLSKSEGFRGRHPICAHCPNLEKFXXXXXXXXXXXPNQKWQIA---CNVLGANVNNYQICLASLLDESGKFGIEPETGLPYRIRLLGCETQGVHAEIMLLEDLSRTFENAEDKLSNYVLKLCINFSPCRECQSHLSGWLMSGKLANIELHYVQSGEIIQDFG-DRFVAKSISMDRFKTLLTDTDWSQMNGGMGGRQGTFTKGDEVSSTSSPL-VRS---ISGRSPRSSMTPGSRIP 561
            ++ EEIG +++      K +    + + +L+ + S++ + E R + + + +   ++   L    +EK+YLD+ +   GS   ++  L ER KNKER + +   +T G+   LG+E A YDKA++LGKG+SHI     SG      ++   N++RKL +E+N   LKPT  R  V  ECLDGTI++ + SS++K   + ++ +FRTKSA KNK+ I W+   N +  +   KS +K SE+ EP  +L +P+D R ++ +C    +Q  +L+KL +G  +K  DP+      +  A I I+G D    LL  D SS S ++F L+K+EGFRG+    + CP L   S   H +SCS    +WQ+     ++L ++   YQ+ LA+LL   G    EPETGLPYR+R++G + Q     I+LL+DL RTFE+ ED LS+  LK+C+N SP RE  S +S WLM+G+LA++E   +QS  +    G +R V +++  D  ++ L DTDW+Q       R+ TF        +S+P  +RS   IS R+P       SRIP
Sbjct:   73 LIIEEIGQISIGEASQAKSVSSSENYICALSGE-SQIFVIEARLKSDSDCAASRKALLDLPGVQDEKRYLDVTIFSTGSGDVRLALLGER-KNKERFVSILELLTVGRSFGLGKELAVYDKASMLGKGLSHIV-SCWSGLVGEADVFVCGNILRKLKVEENGSVLKPTTGRVPVPPECLDGTISVCVASSTNKKGFS-VICSFRTKSAGKNKYQINWFQGRNDEISVPAGKSFLKLSEEQEPTVILANPRDSRAIFLVCNNSSDQTATLHKLVRG--RKLSDPIFTFTFPVSDA-IFISGVDKDLFLLALDCSSQSLKVFHLNKTEGFRGQESTWSACPELAAISPSFHAVSCS--QHRWQLQPTLADILLSDRCPYQVGLATLLTAGGDIATEPETGLPYRLRVMGGDQQN-DVIIILLDDLERTFESEEDALSSMTLKMCMNSSPGREGLSQISAWLMAGRLASVE---IQSSRLETVSGSERMVLQALHTDTLRSFLVDTDWTQST----KREATFLLDSTERPSSTPANIRSSTPISRRTPVELQPSRSRIP 1689          
BLAST of EMLSAG00000003001 vs. C. finmarchicus
Match: gi|592883398|gb|GAXK01074977.1| (TSA: Calanus finmarchicus comp275195_c0_seq3 transcribed RNA sequence)

HSP 1 Score: 179.874 bits (455), Expect = 6.955e-50
Identity = 104/271 (38.38%), Postives = 163/271 (60.15%), Query Frame = 0
Query:   90 DLALLPGSKG-TKIVFLAERIKNKERLL-VAHNITHGKVLELGEEYAFYDKANVLGKGVSHITPDLVSGESSPPTIYSASNLIRKLHIEDNA--LKPTPARAQVLQECLDGTIALTIQXXXXXXXXNFLVGAFRTKSATKNKFMIEWYLSNNKKDDIVCCKSPVKFSEDCEPLYLLTDPKDPRTVYTLCKTGPNQN-SLYKLTKGLSKKDEDPLLIIPGVIEGAAIGITGDDVSTLLIYDGSSCSARLFSLSKSEGFRGRHPICAHCPNLE 355
            D+ +L  S    ++  L ER KNKER + +   IT G+ L LG+E A YDKA++LGKG+SHI    ++G+     +++  N++RKL +E+N   LKPT  R  +  EC+DGTI++ + +S++K   + ++ +FRTKSA KNK+ I W+   N +  +   KS +K SE+ EP  +L DP+D R +Y +C +G +Q+ SLYKL +G  +K E+P+   P     A      D    LL+ + SS + ++F L K+EGFRG+    + C  L+
Sbjct:    2 DVTILATSTADVRLALLGER-KNKERFVCIIEVITSGRGLSLGKELATYDKASMLGKGLSHIVGCNLTGQPGEGDVFAVGNILRKLKLEENGSVLKPTSGRMPIPPECMDGTISICVATSANKKGFS-VISSFRTKSAGKNKYQINWFQGRNDEISVPAGKSSLKLSEEQEPAVILADPRDARAIYLICNSGSDQSASLYKLVRG--RKLEEPIFTFPFQASEAVFVAGADKNLFLLVLEASSLNLKVFHLMKTEGFRGQQAAWSACNELQ 802          
BLAST of EMLSAG00000003001 vs. C. finmarchicus
Match: gi|592848279|gb|GAXK01109265.1| (TSA: Calanus finmarchicus comp391074_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 33.8834 bits (76), Expect = 1.536e+0
Identity = 28/97 (28.87%), Postives = 54/97 (55.67%), Query Frame = 0
Query:   21 ILAEEIGSLTLLTDFNPKKIVILHSTLASLNEDGSKLLLGEIRSRGEGEWSLGGRSYTLID---KLNEKKYLDLALLPGSKG-TKIVFLAERIKNKE 113
            ++ E IG +++    NPK +    + ++ L+ + +++ + E+R R + +  L  R Y L+D     ++K+YLD+ +L  S    ++  L ER KNKE
Sbjct:  566 LILENIGQISVSEALNPKSVRSSGNFISILSGE-TQVFVAEVRLRADSDC-LASR-YALLDLPGIKDDKRYLDVTILATSTADVRLALLGER-KNKE 844          
BLAST of EMLSAG00000003001 vs. C. finmarchicus
Match: gi|592934856|gb|GAXK01023697.1| (TSA: Calanus finmarchicus comp8196617_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 30.0314 bits (66), Expect = 8.818e+0
Identity = 21/73 (28.77%), Postives = 31/73 (42.47%), Query Frame = 0
Query:  447 YVLKLCINFSPCRECQSHLSGWLMSGKLANIELHYVQSGEIIQDFGDRFVAKSISMDRFKTLLTDTDWSQMNG 519
            ++L  C+N+           G  M   L NI  H+  + EI       F+ K    D+F  L   TDW ++NG
Sbjct:    7 HILLECVNYDNENSTSFEFEGLEMY--LENISEHFRNTSEISLCSAKAFIVK----DKFMDLRDWTDWFKING 207          
BLAST of EMLSAG00000003001 vs. C. finmarchicus
Match: gi|592758211|gb|GAXK01196202.1| (TSA: Calanus finmarchicus comp752775_c1_seq14 transcribed RNA sequence)

HSP 1 Score: 31.5722 bits (70), Expect = 9.462e+0
Identity = 18/37 (48.65%), Postives = 21/37 (56.76%), Query Frame = 0
Query:  447 YVLKLCINFSPCRECQSHLSGWLMSGKLANIELHYVQ 483
            YVL  C N   CR   S LS W + G L N+ LH+VQ
Sbjct: 1288 YVLLHCTN---CRSSFSWLSFWAVKGFLWNLLLHFVQ 1389          
BLAST of EMLSAG00000003001 vs. C. finmarchicus
Match: gi|592758212|gb|GAXK01196201.1| (TSA: Calanus finmarchicus comp752775_c1_seq13 transcribed RNA sequence)

HSP 1 Score: 31.5722 bits (70), Expect = 9.496e+0
Identity = 18/37 (48.65%), Postives = 21/37 (56.76%), Query Frame = 0
Query:  447 YVLKLCINFSPCRECQSHLSGWLMSGKLANIELHYVQ 483
            YVL  C N   CR   S LS W + G L N+ LH+VQ
Sbjct: 1318 YVLLHCTN---CRSSFSWLSFWAVKGFLWNLLLHFVQ 1419          
BLAST of EMLSAG00000003001 vs. C. finmarchicus
Match: gi|592758213|gb|GAXK01196200.1| (TSA: Calanus finmarchicus comp752775_c1_seq12 transcribed RNA sequence)

HSP 1 Score: 31.5722 bits (70), Expect = 9.555e+0
Identity = 18/37 (48.65%), Postives = 21/37 (56.76%), Query Frame = 0
Query:  447 YVLKLCINFSPCRECQSHLSGWLMSGKLANIELHYVQ 483
            YVL  C N   CR   S LS W + G L N+ LH+VQ
Sbjct: 1373 YVLLHCTN---CRSSFSWLSFWAVKGFLWNLLLHFVQ 1474          
BLAST of EMLSAG00000003001 vs. L. salmonis peptides
Match: EMLSAP00000003001 (pep:novel supercontig:LSalAtl2s:LSalAtl2s170:640804:649458:1 gene:EMLSAG00000003001 transcript:EMLSAT00000003001 description:"maker-LSalAtl2s170-augustus-gene-6.8")

HSP 1 Score: 1341.25 bits (3470), Expect = 0.000e+0
Identity = 658/658 (100.00%), Postives = 658/658 (100.00%), Query Frame = 0
Query:    1 MSDTLSLNSFGSPFGGTSPGILAEEIGSLTLLTDFNPKKIVILHSTLASLNEDGSKLLLGEIRSRGEGEWSLGGRSYTLIDKLNEKKYLDLALLPGSKGTKIVFLAERIKNKERLLVAHNITHGKVLELGEEYAFYDKANVLGKGVSHITPDLVSGESSPPTIYSASNLIRKLHIEDNALKPTPARAQVLQECLDGTIALTIQSSSSKSSKNFLVGAFRTKSATKNKFMIEWYLSNNKKDDIVCCKSPVKFSEDCEPLYLLTDPKDPRTVYTLCKTGPNQNSLYKLTKGLSKKDEDPLLIIPGVIEGAAIGITGDDVSTLLIYDGSSCSARLFSLSKSEGFRGRHPICAHCPNLEKFSSPSHVISCSSPNQKWQIACNVLGANVNNYQICLASLLDESGKFGIEPETGLPYRIRLLGCETQGVHAEIMLLEDLSRTFENAEDKLSNYVLKLCINFSPCRECQSHLSGWLMSGKLANIELHYVQSGEIIQDFGDRFVAKSISMDRFKTLLTDTDWSQMNGGMGGRQGTFTKGDEVSSTSSPLVRSISGRSPRSSMTPGSRIPTRSGSGCPIPNASTPNPGVCNNVSNGCGNVSLNNRSDVIDSLISISSSTEFRSDNMKDLVANLNASLQNVLSVDASLRSNLMCLENSVAXIQQNLDP 658
            MSDTLSLNSFGSPFGGTSPGILAEEIGSLTLLTDFNPKKIVILHSTLASLNEDGSKLLLGEIRSRGEGEWSLGGRSYTLIDKLNEKKYLDLALLPGSKGTKIVFLAERIKNKERLLVAHNITHGKVLELGEEYAFYDKANVLGKGVSHITPDLVSGESSPPTIYSASNLIRKLHIEDNALKPTPARAQVLQECLDGTIALTIQSSSSKSSKNFLVGAFRTKSATKNKFMIEWYLSNNKKDDIVCCKSPVKFSEDCEPLYLLTDPKDPRTVYTLCKTGPNQNSLYKLTKGLSKKDEDPLLIIPGVIEGAAIGITGDDVSTLLIYDGSSCSARLFSLSKSEGFRGRHPICAHCPNLEKFSSPSHVISCSSPNQKWQIACNVLGANVNNYQICLASLLDESGKFGIEPETGLPYRIRLLGCETQGVHAEIMLLEDLSRTFENAEDKLSNYVLKLCINFSPCRECQSHLSGWLMSGKLANIELHYVQSGEIIQDFGDRFVAKSISMDRFKTLLTDTDWSQMNGGMGGRQGTFTKGDEVSSTSSPLVRSISGRSPRSSMTPGSRIPTRSGSGCPIPNASTPNPGVCNNVSNGCGNVSLNNRSDVIDSLISISSSTEFRSDNMKDLVANLNASLQNVLSVDASLRSNLMCLENSVAXIQQNLDP
Sbjct:    1 MSDTLSLNSFGSPFGGTSPGILAEEIGSLTLLTDFNPKKIVILHSTLASLNEDGSKLLLGEIRSRGEGEWSLGGRSYTLIDKLNEKKYLDLALLPGSKGTKIVFLAERIKNKERLLVAHNITHGKVLELGEEYAFYDKANVLGKGVSHITPDLVSGESSPPTIYSASNLIRKLHIEDNALKPTPARAQVLQECLDGTIALTIQSSSSKSSKNFLVGAFRTKSATKNKFMIEWYLSNNKKDDIVCCKSPVKFSEDCEPLYLLTDPKDPRTVYTLCKTGPNQNSLYKLTKGLSKKDEDPLLIIPGVIEGAAIGITGDDVSTLLIYDGSSCSARLFSLSKSEGFRGRHPICAHCPNLEKFSSPSHVISCSSPNQKWQIACNVLGANVNNYQICLASLLDESGKFGIEPETGLPYRIRLLGCETQGVHAEIMLLEDLSRTFENAEDKLSNYVLKLCINFSPCRECQSHLSGWLMSGKLANIELHYVQSGEIIQDFGDRFVAKSISMDRFKTLLTDTDWSQMNGGMGGRQGTFTKGDEVSSTSSPLVRSISGRSPRSSMTPGSRIPTRSGSGCPIPNASTPNPGVCNNVSNGCGNVSLNNRSDVIDSLISISSSTEFRSDNMKDLVANLNASLQNVLSVDASLRSNLMCLENSVAXIQQNLDP 658          
The following BLAST results are available for this feature:
BLAST of EMLSAG00000003001 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000003001 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA)
Total hits: 19
Match NameE-valueIdentityDescription
gi|592883399|gb|GAXK01074976.1|1.253e-9135.55TSA: Calanus finmarchicus comp275195_c0_seq2 trans... [more]
gi|592883400|gb|GAXK01074975.1|3.328e-8935.22TSA: Calanus finmarchicus comp275195_c0_seq1 trans... [more]
gi|592853628|gb|GAXK01103916.1|1.328e-8636.69TSA: Calanus finmarchicus comp1171965_c0_seq2 tran... [more]
gi|592853629|gb|GAXK01103915.1|1.386e-8636.69TSA: Calanus finmarchicus comp1171965_c0_seq1 tran... [more]
gi|592883398|gb|GAXK01074977.1|6.955e-5038.38TSA: Calanus finmarchicus comp275195_c0_seq3 trans... [more]
gi|592848279|gb|GAXK01109265.1|1.536e+028.87TSA: Calanus finmarchicus comp391074_c0_seq1 trans... [more]
gi|592934856|gb|GAXK01023697.1|8.818e+028.77TSA: Calanus finmarchicus comp8196617_c0_seq1 tran... [more]
gi|592758211|gb|GAXK01196202.1|9.462e+048.65TSA: Calanus finmarchicus comp752775_c1_seq14 tran... [more]
gi|592758212|gb|GAXK01196201.1|9.496e+048.65TSA: Calanus finmarchicus comp752775_c1_seq13 tran... [more]
gi|592758213|gb|GAXK01196200.1|9.555e+048.65TSA: Calanus finmarchicus comp752775_c1_seq12 tran... [more]

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BLAST of EMLSAG00000003001 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self)
Total hits: 1
Match NameE-valueIdentityDescription
EMLSAP000000030010.000e+0100.00pep:novel supercontig:LSalAtl2s:LSalAtl2s170:64080... [more]
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BLAST of EMLSAG00000003001 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000003001 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000003001 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017))
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000003001 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s170supercontigLSalAtl2s170:640804..649458 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Blast vs. GO2014-04-02
TblastN vs C. finmarchicus TSA2014-05-09
Blastp vs. self2014-05-10
Blastp vs. SwissProt2017-02-10
Blastp vs. Selected Arthropods2017-02-20
Blastp vs. NR (2/2017)2017-02-20
Blastp vs. Tigriopus kingsejongensis proteins2018-04-18
Properties
Property NameValue
Logic nameensemblgenomes
Descriptionmaker-LSalAtl2s170-augustus-gene-6.8
Biotypeprotein_coding
EvidenceIEA
NoteHypothetical protein
Cross References
External references for this gene
DatabaseAccession
Ensembl Metazoa (gene)EMLSAG00000003001 (primary cross-reference)
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
EMLSAT00000003001EMLSAT00000003001-698848Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at LSalAtl2s170:640804..649458+

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAG00000003001-685767 ID=EMLSAG00000003001-685767|Name=EMLSAG00000003001|organism=Lepeophtheirus salmonis|type=gene|length=8655bp|location=Sequence derived from alignment at LSalAtl2s170:640804..649458+ (Lepeophtheirus salmonis)
GGGCACAGTCCAAGAGGAGTAAGCGTTGGGAGTGTACACTTATAAACCTG ACAGTTGTACACCATTGGTTAAAAAGATTGATTTATTTATTAAAAGTTTG TGACTCGTGTGTTTGACGAATTATGATCTAAAACCCCTTATTTGTTTTGG ATATGTTTGAATAATGGGCTTATAGCTCACTAAATCTCTCCTTCTCATCT CTTATTTATTTGAACACGTAGTGAAGCGTCCCTTTTTGTACTGCCCCCCC CCCCTCCCTCTTAGAAAGCTCTTTAAAGTAAGGGGATTCGATGGTTTATG CCTCATACTAATGCCTAAATGTTGTATTCTTTTCTCTTTTAAGATTTGCA ATGAGCGATACGCTGAGTCTAAATAGTTTTGGAAGTCCTTTTGGAGGAAC GAGCCCTGGGATCCTGGCGGAAGAAATTGGATCTCTTACACTCCTCACGG ACTTTAATCCCAAAAAAATCGTTATTCTTCACTCAACACTCGCCTCTCTC AACGAAGATGGCTCTAAACTCCTTCTCGGCGAAATCCGCTCAAGGGGTGA AGGGGAATGGAGTCTGGGAGGAAGGAGTTATACTCTCATTGACAAACTCA ATGAAAAAAAGTATTTAGACTTGGCTCTTTTGCCGGGAAGCAAAGGAACG AAAATTGTGTTTTTAGCGGAGCGGATTAAGAATAAAGAACGACTCCTTGT TGCCCATAACATTACCCATGGCAAGGTTTTAGAGCTAGGCGAAGAGTATG CCTTCTATGATAAAGCCAACGTACTTGGAAAAGGCGTTTCACATATAACA CCCGACTTGGTCTCTGGAGAATCCTCRCCACCAACCATTTATTCAGCCTC TAATCTCATAAGAAAACTACATATTGAGGATAATGCCTTGAAACCTACAC CTGCAAGAGCACAAGTTCTACAAGAATGTCTTGACGGAACAATTGCTCTT ACCATTCAATCATCATCCTCAAAATCGTCCAAAAATTTCTTAGTCGGAGC CTTTCGAACGAAGTCCGCTACAAAGAATAAATTCATGATTGAATGGTATT TGAGCAATAACAAGAAGGATGATATCGTTTGCTGTAAATCCCCTGTCAAG TTCAGTGAGGATTGTGAACCCCTGTATCTCCTCACAGATCCCAAAGATCC ACGTACCGTCTACACACTCTGCAAAACGGGTCCTAACCAAAACTCTCTCT ACAAACTTACCAAAGGTCTTTCAAAAAAAGATGAGGATCCTCTTTTGATC ATTCCCGGTGTCATCGAAGGAGCCGCAATTGGTATCACTGGAGACGATGT ATCCACACTTCTCATCTATGATGGAAGCAGTTGTAGTGCAAGGCTATTTT CTTTGTCAAAGAGTGAGGGATTCCGTGGAAGGCATCCCATTTGTGCACAT TGTCCAAATTTAGAGAAATTTTCAAGCCCTAGTCATGTGATATCCTGTTC ATCACCAAATCAAAAATGGCAAATTGCGTGCAATGTCCTTGGAGCGAATG TGAATAACTATCAAGTAAGTTGGTGGATTTATATACTTCGGGGTCTCCTG GGCTCTTATAATATTCATTTGTATGTTCATAACATGTTGTAAGGTCTTGT TCATTGATTGGAAAAATGTATCATTAAATGAAATGCTTCTTTAAACACAC AATTTTATATGTGAACCAAAGAACAAGAGGTATAAAATGAAACATAAAAC TTTCACAAAAACATTTGTATTTCAATCAAATACATTAAAGTCATTATTTC TCTGCCCTAATAGCCTTGTTATTTGAAATTAAAATGAATAAATACATGTA AACCCCTAGATATACCTTTTCAATCTGCAAATTTTAATTTTAATGCTCTG CTAAAAAAAAGATCAGGGTTCATTGTTATTTGAGTACTCGTGAGAGGGGC ATATAATATAATCTAGAACTCTTGCAGGATTCTTAGTATCTGCAACTTGA ACAAGGGTTTTTATTTATGAAAGCTGGCATCATTATTCTGTAGGAGAGTA CATATTTTAATAAGTATATAGTAATCACACGTGCTGTAAAATGAAAACAG TTTCGACAAATCAAAWCCCCTGCTCAAGTTGCAGTTACAAAGAATCTTGA GCAGAGCTATTATGACTTTGCATTAGATTAGCTTTAAGGGGTAATACATT TATAATGTCCGGGAAAAAGCACAATTTCTGACACACACACCNTCACTCCC CTTGTCTGTGTTTGTCCTAAACTTCTTCTAATTGGACGTCCTTAATTTTT AGATCACCCACCTTGTATGTATTTGTGTATGAAATATATTGGTTATCTTA AAGATCAGGGACGTCTGTAGGATTATATATTTTTTTGTTCTGGGAGGGGT ATTTTGTGGAAAAAAATTTCAAAAATCTCTCTGCAGTATAATTTGTTCGA ATGTTCATTTTTTTTAAAGAAAATAAATGTTTAAAAAAATTGTAAGGGCA CTCCTGCTGACGTCAGATTGAAAAGGTTTTGTTGATGAGTGAAACAATGA TCAATTCTCAATGTAGTGGACTCAAGAATATCCCATATCCCTCCTTCCCC CCCCCCCCCCTCCCCCGTCAATTGGACGTTAAAAATGTATAACCTAGTCT TGAAAATCCATGGGCATGTTAAAAAAAGAAACCGAAAATCAGCTCGGTAA CTCAGACAATATGAAGAATGTTTTGGAAGGGAGAAAGAATAATGCTCATA AAGTTTCATTAGATCAGCTACAATCAGCTGTGACTTGGGAGGAAGGCGAG AAGGAAATAAACAATCACATTTGCTGGAATTATTCGCATGTCAATCCTCA ATTCTACTCGTAGTCCAACAAGGACTTACAATTATAACTCCACAATAAAT CCTCAGGGCTAGGCTCCGTCTTTTATGAGCCCACACAGGGATGTTCAATC AGATTTGGAATTTAATTGAATGTGATATGAAAATGAGTTGAGTTCCCTAC TGCTAAGAAAAAGTAAATTCATTCTTCAGATTACCAATTCCTAAAAACGG GGGAGCTATAAAATTCACCGGATTTACATCACTGGACCCCTCCAGCAGCT GTGATGAGGGGGAGAAAGAAGGAAATAAACAAGGACATAGACAAAGATGA CTCTTCTGTCGATCTTCAATTCTACTATGAGGCTAACAAGGACTTACACC TGCTAAAACTCTCCAACAAATCCTCAGTGTTACTCCCCGTCATTTACGAT CAAACGCACTTTTGATTACTTTGTAGATGTTATTTCTTAAAGAATTAGAA AAATGATGACAGCTTTAGCAAATGAAATACCCTGTTCAGGTTGCAACTAC AAAAAGGCTCTCACACATTTCTAGGTCATATTTTGTTGCAACTCTAGTGA TAATTCATGAATTTTTAAACAATTTTAATAGCTAGCTCTAATTTGATAAA AATGAACTAAAAATTCATTTGTAATGAGATACGAAATCCTCTCTTCCCGT TTTTATAACGTCAAAAATAATAATGAGTTGAGGTGTATAGAATATGTCCT AGAAAGCGGGAGCTACTTTTTTCCCCCCTTTGCAARCTAAATAAGATTTT AGTAAGAAAACTTTGCTGTTTGGAAGGAACTGAAGAGTAAAATCAAACCA CATAAAATGACAGCAAAATTAACGTCCAGGGTTATTTAAACATATATCAC TTCATAGATTGATCAAGAGGGCCNATAAGTAATCATCAAACTCGGTCCAA AATCGAACTATTTTTCGATCAGGACGATTTTGACCGATATTTCAGTCCAG ACCGCTGTCTCAGACTTTGTTCGAAATTTAATCGTTTTCAAATAGTAGAC TGATTTGTTCCCCAATCCGGATTTATGAGCCTTACAATATTAAAATACAG TTAACGTCATCAAAAAGTAATAAATAAAAGCAGTCGAGAACGAATTTTAA ATGAGACAGGCCCAGACCGAACCTTTTTAAAAGACCAAATTAGACGGTCT TCCACAAAAATCATAATATATACGAGTTATGTTCAAAAATAAGGATACTT CGTATTTTTAGGGAATGAATGTTTCTTTATTTATGAATAAAGGTGAAAAT CCAGTGTGGAATGGCCATGTTAAAAAAAAGAAACCGAGAATGAAAATGAT AACCCTTACAATTTGAAGAATGTTTAGGAGGAGAGGAAGAATAATACTCA TGACGTTTCATTAGATCAGCTACAATCGGCTGTGACTAGATAGGAAGGCG AAAAGGATATAAACAAGGGCATTTGTACGAATTACCCCTATGTCTATACT ACATCCTACTCTGAGTCAAACAAGGACATACAGTTATAACTCCGCAACAA ATACTTAGGATTACGTTCCGTCTTGTATGAGCACGCGAATGTTCAACCAG GCTTTGAATCTAATTAGGAAAGATGTTCACCTCTCGGCAATTAAATAATA ATGACAACTGCTAAGAAAAAGAAAATTCGTTCTTTATTCATTATTAATAC CAGTTACAAATTAACGGGCCAGCTAAAAAACACAGCGGATTTACATAATT ATCCATCAATATTTATGTTATCCCCTTCAAAGTAATCCTCCTCAGGTATA ATAAATTAGTGCCAATGCTTGTTCCGATCTTCTATGCGCTTTTCATAAGG AGATATGTAGCCTAAGAAGGTGTGTTTTTCAACTTTTTTCTAATTTCGAT GAAGATCTCAGACCGAAACCAACAATAATACCTACATACTGTAACAAAAG ATTACTATGGATTACTTCAGCCATTTTGTCAAGTCGTATTTTAACATGAA ACATTTTAATTCTATTTTATTTTTAGTTAATTGTAGATCGTGTAATTTTA CCACTTACAGTTCCTTGATTATTACAAACGTAGTACAATGATTGAAATAC CTTGGTAGTTCCACTTGATTGAGCCTTCATATTCAGCTAAATATATTACT AATTCTTATGACAGTATTTATTGTAGTATCATGGCAAATAGTTATGTAAC ATTAAATGCATATGAAAAGGTGGATTCGTTAATAGTTTTTGTTTGCTTGC TTACTTTATGAAATAAGGTAGTTAATTTAATGTTTAATGATCTCATAAAT TAATTACCTTAGTTTTGTCCCAAATAATGCATTGATTTGTTTAATAAATT ATTTTTATAATTATTATAAGGACTGTGTCAAAACCTGACAGGATCTCAAA TTTTAAACACTAAAAGAATGTCGAATATCTATCTAGAAATTCAAATAATT ATGTGGCATTTTTTTATATATAAGTTTTATTTTGAGCAAATGACTTTCAC ATTTTTATAATTTTTTCCACCCAAAATTAACGTTTAACAACCTATTGAGT TTTTTTGCGATACTACATAACATGCATCTACTGACTAGTCGTACTGGACG TTAAACAGTATCTATAGATCGGTTGCTGCCMACTTTTYTGGKGCCATGAT CCCTTGATAGCATTTACCAAGTCGTGTTGACCCCATGGAAGTAAAATTAT TTGATTTGATCATCCTTCATTACATTATTCAATTTGTTAACATATCCAAG CATAACTCGAAAAATGTCTTTGTCAGCACCAAATCCTCAGCAATTGTGTA GGATCCCTTGGCTTTGACGATTCTGAGAGCACCCAAATATGAAGCTTCAA TGGCGGCCATATTTTCCTCTTCGTATTTGCCGCCAAAAATTAAGACTTTT ATTTTTTTTTACGTCCATCAGCTTTGTTCTTAAAATACAGAACATCCTCA CCCATAATGTTTGGATGTTACTCGTCAAAATGTCAACCTTTGAGCATACT CTAAGTATTTTTTGATGCAATGTATTAATCATAAGATAGTTCACTAAAGA CTGTTGTTTTTTTATGTAAATACAAGAGAGTCTGTGGATTTCATCTACTA AACCCTATACAAATGGGGTAACTTGAGTAATTTGCTTATTCAAGCTACAA CTTGTACAAAGTACTAAGTTCTATAATACAACTATTATCTAATTAAGTAT GTTCTCGGGACAAAGAAAAAGACCATAAAGTGACTTGTAAGATAGAACAT GACAGATGGAATGTTTGATCAAATATATATTGATGAGAATCAACGCGTAC ACATCTGTGTTATAATAATACTATTGCCAGGTGTGAAAAACAAACAAAAA AACATAGCACTTACCTTTCCTTGATGAGAGTAGAAAATCAATAAAATGAT AATTTTCAAATTGATATAATTAATTATGATATATATATTTTATTATTTTT CATTCTTATTTTAAACAAATTGACTTAAAACAGGGAGTAGAATCTGTTTG TGGTTTACTTATTACTTATTTGACCAGTAAATGAATTGAGTGTGAACATA CTTGGACGAATAATCGTTAATTTCTATTAATAAACTATTCTAATTATCCA ATTATATGTGCCGCAATGTAGTCAAAATTGATCATCATAATAAAAAAATA GTATATGTATAGTTTTGATTTAGAAGTCCTATTTGGGACTATTATAAGTA GATCTTAAATCAAATATAGATTCACCACTATTGATATAAATTTCCTGAAT ATCTTTTCTCATCCCACAAAATATATTTAATTGAAGAAACTTTTTCTTTT TTTATTACTTTGTTACTATTAAAAAGGTATAGTGCCTTAGTATCTAAATC TCCGTATGAAAGGGCCAAGGAACAAAAAAAAAAAAAACACTTAAGAAAAT AAACTAAATTAACAAAAAGAAATAATTAAGTATCTCACTTCCTTCACTCG TAAAGTGGAGCATGGAAGACCCAGGGAAAAGTAATATGAATTGAATTGTA GACCATTAATGTAATGAAGAATGATATAATGTTTGAAATATTAATAATTG ATACAATTTATATTTGAAAGGGGTCATAATGGCGCTAATTTTCCCCCAGT AATTTGAATAATAAGCCTATAATTGACTCTAATATGAGTCTGAAATATTG GGTTGTATGTAACTCAGGTGCTGAAAAGTACCAGGATGTACATATAGATG GCGCTTTTAACTTCGTCTCATTTTCTGCGTGTGCCAACCTTCAAAGGACA TCTGTCAAAATTTAATGTCTGTTCTATAGGCAGGGATTTATTGTAGTTTW GCTATTTYCTAAACAATGGCCCAAAAAAATTGTCTTTTTAATTTTACACT GCTTCTTGATAGGAAAAAATACCGTTTAACCTAAGTAATGGCTTGGAAAG TGCTACGGGGACTCCGCCCTATAACCCAAGTAAAATAGTAATAGTAATTA TTCACTGAAAAAGAAACGTCTTTTCTTAGTTAAGCCCGAGACTTTTCAGA CCATCAATCATAGATATGTAAATGTCTATGTAAAAAATTTATTTGAATTT TCTGTTTGTATTGATTTTTGTTCAAGATTTTTTATGTTGACCTACTACAT ATTATGTCATTAAGACCTCCAACTTTTCCCCTCTTTAAAAGAATCCATGC TTTGTTTCCTAGCGTACAATTTTTTCTGACTTGAGGGCATTTTCCTAATC TGATTCATAACTAAAGAGAATTTCTGTGTATGACCATTTTACTACTTTTA TTTAATTTTGTTATTTCCAAACTTCTTACATCATTTTCCATTTAACCAAC TACATAGTATATTTTTCCTTACAATCCTTTACAGATATGCCTTGCCTCAC TCCTTGACGAATCCGGGAAATTTGGAATAGAGCCAGAAACTGGACTCCCA TATAGAATCCGACTCCTTGGTTGTGAAACACAGGGCGTCCACGCTGAAAT CATGTTACTTGAAGATTTGTCACGTACCTTTGAGAATGCGGAGGACAAAC TCTCAAACTATGTTCTAAAGCTATGTATCAACTTTTCCCCATGTCGAGAG TGTCAGTCACATCTCTCGGGTTGGCTCATGTCTGGTAAACTTGCAAATAT AGAGCTTCACTATGTTCAGTCTGGAGAGATTATACAGGACTTTGGAGATC GTTTTGTAGCTAAATCAATAAGTATGGATCGATTCAAAACCCTCCTTACG GATACGGACTGGTCACAAATGAATGGCGGAATGGGAGGACGTCAGGGTAC GTTTACAAAGGGAGACGAAGTCTCTTCCACATCTTCACCTCTTGTAAGGT CAATTAGTGGAAGATCTCCGAGGAGTAGTATGACTCCTGGATCTCGTATT CCAACTCGATCCGGAAGTGGATGTCCAATTCCAAATGCCTCTACTCCAAA TCCAGGAGTTTGTAACAATGTGAGCAATGGTTGTGGAAATGTTAGCCTTA ATAATCGCTCGGATGTTATAGACTCTCTCATCTCAATATCTTCTTCAACG GAATTCCGATCTGATAACATGAAAGACCTCGTCGCGAATTTGAACGCCTC TTTACAGAATGTTTTGTCTGTTGATGCGTCTTTAAGAAGTAATTTAATGT GTCTTGAGAATAGTGTGGCTCMGATCCAACAAAATTTGGATCCTTAGATA TGTGAGAGTCACTCATAAGGGGGGATTATGATGATAATTTTGTTTTATTT TTACATTATATTTTTTGAAAGTATGCAATTAATTAATTATTATTTGAGCG TATGCCTATTTTAGATATATTACAATTATACTTCTACAAAGATTCATATT ATATCATATATACAATATATTAGCTACAACTTTACGCAAGGATAATAATT ATCATATTTGTTTTTAGATCAGCCCATTCATTTGGGTATTTTTAAATGTT ATTGC
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