EMLSAG00000003010, EMLSAG00000003010-685776 (gene) Lepeophtheirus salmonis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of EMLSAG00000003010 vs. C. finmarchicus
Match: gi|592819863|gb|GAXK01134705.1| (TSA: Calanus finmarchicus comp704522_c0_seq1 transcribed RNA sequence) HSP 1 Score: 59.3066 bits (142), Expect = 2.170e-9 Identity = 35/118 (29.66%), Postives = 56/118 (47.46%), Query Frame = 0 Query: 110 NCCISLYLSSGSDKRVRNSQAEKLGRYNILYKDSVGRSVYKHSQNERVYLYYFSRSNTNWKG-WMIGPSPGGVMGGILAENEEFC--PTHSGKWYYYTSGKFLQSSELHLSCEEETGD 224 +CC L ++S + + Q+ +LG Y + D GR +YKH + E+ Y SRS KG WM+GP G GG+ + + C G W Y + + ++L + C + D Sbjct: 283 SCCSHLLITSSGE--AADHQSHRLGSYLVTTTDVSGRPIYKHQEREQFLFYLQSRS----KGLWMVGPEVGQFDGGLASPADPHCVEDVPGGGWRYTDGSAWYRDTQLRVRCHHQGED 618
BLAST of EMLSAG00000003010 vs. C. finmarchicus
Match: gi|592757211|gb|GAXK01197202.1| (TSA: Calanus finmarchicus comp2133768_c0_seq1 transcribed RNA sequence) HSP 1 Score: 56.6102 bits (135), Expect = 3.464e-8 Identity = 44/180 (24.44%), Postives = 67/180 (37.22%), Query Frame = 0 Query: 110 NCCISLYLS-SGSDKRVRNSQAEKLGRYNILYKDSVGRSVYKHSQNERVYLYYFSRSNTNWKGWMIGPSPGGVMGGILAENEEFCPTHSGKWYYYTSGKFLQSSELHLSCEEETGDEILDIGRSKGRSGESFFENLXXXXXXXXXXXXGSSQNGNVMLPFYSIKADPNVVTATFVYANNN 288 +CC S+ + SGS Q K G Y + + VYK Q+ + YF S + W+GW++GP GG+ ++ CPT + W +Y+ G ++ +SC T + P Y+I AD N V A FV+ N Sbjct: 21 SCCPSIIIKLSGS---CHTHQHSKAGLYTLTNSVNTTTPVYK--QSGGLNYAYFHPSASAWQGWLVGPDTLTPRGGLACQSAASCPTSARGWQFYSPGDGFVDGDISVSCLGSTAYHYHHHKHYH----------------------KALQHKAALQAPGYTITADQNTVDARFVFPNKK 479
BLAST of EMLSAG00000003010 vs. C. finmarchicus
Match: gi|592865523|gb|GAXK01092039.1| (TSA: Calanus finmarchicus comp76178_c5_seq6 transcribed RNA sequence) HSP 1 Score: 50.0618 bits (118), Expect = 4.130e-6 Identity = 32/114 (28.07%), Postives = 54/114 (47.37%), Query Frame = 0 Query: 111 CCIS-LYLSSGSDKRVRNSQAEKLGRYNILYKDSVGRSVYKHSQNERVYLYYFSRSNTNWKGWMIGPSPGGVMGGILAENEEFC-PTHSGKWYYYTSGKFLQSSELHLSCEEET 222 CC S ++ S+G+ + S E +G Y + D+ GRSVYK + VYL+Y + ++ W+ S +MG ++ E+ C + W T + S +SC+ T Sbjct: 382 CCSSVMFESTGA---IGTSNPELVGSYRRIGTDATGRSVYK---KDDVYLHYVNDVAYKFEAWVFSSSADDLMGDVVNEDTNKCVDATASTWEILTDNSWQADSTAKVSCDGNT 705
BLAST of EMLSAG00000003010 vs. C. finmarchicus
Match: gi|592865526|gb|GAXK01092036.1| (TSA: Calanus finmarchicus comp76178_c5_seq3 transcribed RNA sequence) HSP 1 Score: 49.2914 bits (116), Expect = 6.663e-6 Identity = 32/114 (28.07%), Postives = 54/114 (47.37%), Query Frame = 0 Query: 111 CCIS-LYLSSGSDKRVRNSQAEKLGRYNILYKDSVGRSVYKHSQNERVYLYYFSRSNTNWKGWMIGPSPGGVMGGILAENEEFC-PTHSGKWYYYTSGKFLQSSELHLSCEEET 222 CC S ++ S+G+ + S E +G Y + D+ GRSVYK + VYL+Y + ++ W+ S +MG ++ E+ C + W T + S +SC+ T Sbjct: 482 CCSSVMFESTGA---IGTSNPELVGSYRRIGTDATGRSVYK---KDDVYLHYVNDVAYKFEAWVFSSSADDLMGDVVNEDTNKCVDATASTWEILTDNSWQADSTAKVSCDGNT 805
BLAST of EMLSAG00000003010 vs. C. finmarchicus
Match: gi|592865539|gb|GAXK01092023.1| (TSA: Calanus finmarchicus comp76178_c1_seq4 transcribed RNA sequence) HSP 1 Score: 49.2914 bits (116), Expect = 8.056e-6 Identity = 32/114 (28.07%), Postives = 54/114 (47.37%), Query Frame = 0 Query: 111 CCIS-LYLSSGSDKRVRNSQAEKLGRYNILYKDSVGRSVYKHSQNERVYLYYFSRSNTNWKGWMIGPSPGGVMGGILAENEEFCPTHSG-KWYYYTSGKFLQSSELHLSCEEET 222 CC S ++ S+G+ + S E +G Y + D+ GRSVYK + VYL+Y + ++ W+ S +MG ++ E+ C + W T + S +SC+ T Sbjct: 52 CCSSVMFESTGA---IGTSNPELVGSYRRIGTDATGRSVYKK---DDVYLHYVNDVAYKFEAWVFSSSADDLMGDVVNEDTNKCVDATAPTWEILTDNSWQADSTAKVSCDGNT 375
BLAST of EMLSAG00000003010 vs. C. finmarchicus
Match: gi|592865540|gb|GAXK01092022.1| (TSA: Calanus finmarchicus comp76178_c1_seq3 transcribed RNA sequence) HSP 1 Score: 49.2914 bits (116), Expect = 8.303e-6 Identity = 32/114 (28.07%), Postives = 54/114 (47.37%), Query Frame = 0 Query: 111 CCIS-LYLSSGSDKRVRNSQAEKLGRYNILYKDSVGRSVYKHSQNERVYLYYFSRSNTNWKGWMIGPSPGGVMGGILAENEEFCPTHSG-KWYYYTSGKFLQSSELHLSCEEET 222 CC S ++ S+G+ + S E +G Y + D+ GRSVYK + VYL+Y + ++ W+ S +MG ++ E+ C + W T + S +SC+ T Sbjct: 52 CCSSVMFESTGA---IGTSNPELVGSYRRIGTDATGRSVYKK---DDVYLHYVNDVAYKFEAWVFSSSADDLMGDVVNEDTNKCVDATAPTWEILTDNSWQADSTAKVSCDGNT 375
BLAST of EMLSAG00000003010 vs. C. finmarchicus
Match: gi|592865541|gb|GAXK01092021.1| (TSA: Calanus finmarchicus comp76178_c1_seq2 transcribed RNA sequence) HSP 1 Score: 49.2914 bits (116), Expect = 9.171e-6 Identity = 32/114 (28.07%), Postives = 54/114 (47.37%), Query Frame = 0 Query: 111 CCIS-LYLSSGSDKRVRNSQAEKLGRYNILYKDSVGRSVYKHSQNERVYLYYFSRSNTNWKGWMIGPSPGGVMGGILAENEEFCPTHSG-KWYYYTSGKFLQSSELHLSCEEET 222 CC S ++ S+G+ + S E +G Y + D+ GRSVYK + VYL+Y + ++ W+ S +MG ++ E+ C + W T + S +SC+ T Sbjct: 141 CCSSVMFESTGA---IGTSNPELVGSYRRIGTDATGRSVYKK---DDVYLHYVNDVAYKFEAWVFSSSADDLMGDVVNEDTNKCVDATAPTWEILTDNSWQADSTAKVSCDGNT 464
BLAST of EMLSAG00000003010 vs. C. finmarchicus
Match: gi|592865542|gb|GAXK01092020.1| (TSA: Calanus finmarchicus comp76178_c1_seq1 transcribed RNA sequence) HSP 1 Score: 49.2914 bits (116), Expect = 9.412e-6 Identity = 32/114 (28.07%), Postives = 54/114 (47.37%), Query Frame = 0 Query: 111 CCIS-LYLSSGSDKRVRNSQAEKLGRYNILYKDSVGRSVYKHSQNERVYLYYFSRSNTNWKGWMIGPSPGGVMGGILAENEEFCPTHSG-KWYYYTSGKFLQSSELHLSCEEET 222 CC S ++ S+G+ + S E +G Y + D+ GRSVYK + VYL+Y + ++ W+ S +MG ++ E+ C + W T + S +SC+ T Sbjct: 141 CCSSVMFESTGA---IGTSNPELVGSYRRIGTDATGRSVYKK---DDVYLHYVNDVAYKFEAWVFSSSADDLMGDVVNEDTNKCVDATAPTWEILTDNSWQADSTAKVSCDGNT 464
BLAST of EMLSAG00000003010 vs. C. finmarchicus
Match: gi|592905168|gb|GAXK01053207.1| (TSA: Calanus finmarchicus comp354353_c4_seq80 transcribed RNA sequence) HSP 1 Score: 48.9062 bits (115), Expect = 1.309e-5 Identity = 33/113 (29.20%), Postives = 53/113 (46.90%), Query Frame = 0 Query: 110 NCCISLYLSSGSDKRVRNSQAEKLGRYNILYKDSVGRSVYKHSQNERVYLYYFSRSNTNWKGWMIGPSPGGVMGGILAENEEFCPTHSGK--WYYYTSGKFLQSSE--LHLSC 218 +CC + + S + R+ QA +G Y L +D GR+VYK + +Y+Y+F+ W+IGP G + GI C H K W Y + + ++ L +SC Sbjct: 98 SCCEQVRVGSTGNARI--DQALYMGIYTRLARDFNGRAVYKREGRDPLYVYFFTSQRDQLSLWVIGPQLGQFIAGIRNSKAGNC-VHDLKTGWKYASRAGVWEDNDPSLTVSC 427
BLAST of EMLSAG00000003010 vs. C. finmarchicus
Match: gi|592905169|gb|GAXK01053206.1| (TSA: Calanus finmarchicus comp354353_c4_seq79 transcribed RNA sequence) HSP 1 Score: 48.9062 bits (115), Expect = 1.311e-5 Identity = 33/113 (29.20%), Postives = 53/113 (46.90%), Query Frame = 0 Query: 110 NCCISLYLSSGSDKRVRNSQAEKLGRYNILYKDSVGRSVYKHSQNERVYLYYFSRSNTNWKGWMIGPSPGGVMGGILAENEEFCPTHSGK--WYYYTSGKFLQSSE--LHLSC 218 +CC + + S + R+ QA +G Y L +D GR+VYK + +Y+Y+F+ W+IGP G + GI C H K W Y + + ++ L +SC Sbjct: 98 SCCEQVRVGSTGNARI--DQALYMGIYTRLARDFNGRAVYKREGRDPLYVYFFTSQRDQLSLWVIGPQLGQFIAGIRNSKAGNC-VHDLKTGWKYASRAGVWEDNDPSLTVSC 427
BLAST of EMLSAG00000003010 vs. L. salmonis peptides
Match: EMLSAP00000003010 (pep:novel supercontig:LSalAtl2s:LSalAtl2s170:909978:927748:1 gene:EMLSAG00000003010 transcript:EMLSAT00000003010 description:"maker-LSalAtl2s170-snap-gene-9.4") HSP 1 Score: 649.818 bits (1675), Expect = 0.000e+0 Identity = 317/317 (100.00%), Postives = 317/317 (100.00%), Query Frame = 0 Query: 1 MIPLTAGSVIQLQVLRGVLSEDGQSVSTTFSGWXLSSPTATRRAPDPCYCTPPLPGRTPSPPISSHYPITKPPALFHPSYTQRPPLHSYHTPSSSPPSQSGLLGRSPSSNCCISLYLSSGSDKRVRNSQAEKLGRYNILYKDSVGRSVYKHSQNERVYLYYFSRSNTNWKGWMIGPSPGGVMGGILAENEEFCPTHSGKWYYYTSGKFLQSSELHLSCEEETGDEILDIGRSKGRSGESFFENLHKHTHVHYHNHHGSSQNGNVMLPFYSIKADPNVVTATFVYANNNGSLNTEYIPFHHLTGNSPIVKSSNSDDHQ 317 MIPLTAGSVIQLQVLRGVLSEDGQSVSTTFSGWXLSSPTATRRAPDPCYCTPPLPGRTPSPPISSHYPITKPPALFHPSYTQRPPLHSYHTPSSSPPSQSGLLGRSPSSNCCISLYLSSGSDKRVRNSQAEKLGRYNILYKDSVGRSVYKHSQNERVYLYYFSRSNTNWKGWMIGPSPGGVMGGILAENEEFCPTHSGKWYYYTSGKFLQSSELHLSCEEETGDEILDIGRSKGRSGESFFENLHKHTHVHYHNHHGSSQNGNVMLPFYSIKADPNVVTATFVYANNNGSLNTEYIPFHHLTGNSPIVKSSNSDDHQ Sbjct: 1 MIPLTAGSVIQLQVLRGVLSEDGQSVSTTFSGWXLSSPTATRRAPDPCYCTPPLPGRTPSPPISSHYPITKPPALFHPSYTQRPPLHSYHTPSSSPPSQSGLLGRSPSSNCCISLYLSSGSDKRVRNSQAEKLGRYNILYKDSVGRSVYKHSQNERVYLYYFSRSNTNWKGWMIGPSPGGVMGGILAENEEFCPTHSGKWYYYTSGKFLQSSELHLSCEEETGDEILDIGRSKGRSGESFFENLHKHTHVHYHNHHGSSQNGNVMLPFYSIKADPNVVTATFVYANNNGSLNTEYIPFHHLTGNSPIVKSSNSDDHQ 317
BLAST of EMLSAG00000003010 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold2509_size14967-snap-gene-0.3 (protein:Tk10384 transcript:maker-scaffold2509_size14967-snap-gene-0.3-mRNA-1 annotation:"complement c1q-like protein 3-like") HSP 1 Score: 100.523 bits (249), Expect = 6.627e-24 Identity = 94/312 (30.13%), Postives = 138/312 (44.23%), Query Frame = 0 Query: 4 LTAGSVIQLQVLRGVLSED--GQSVSTTFSGWXLS--SPTATRRA----PDPCYC-----------------TPPLPGRTPSPPISSHYPITKPPALFHPSYTQRPPLHSYHTPSSSPPSQSGLLGRSPSSNCCISLYLSSGSDKRVRNSQAEKLGRYNILYKDSV-GRSVYKHSQNERVYLYYFSRSNTNWKGWMIGPSPGGVMGGILAENEEFCPTH--SGKWYYYTSGKFLQSSELHLSCEEETGDEILDIGRSKGRSGESFFENLHKHTHVHYHNHHGSSQNGNVMLPFYSIKADPNVVTATFVYANN 287 L G V+QL++++G + E + TTFSGW ++ P RR+ P+ C C T P P + TKPP L P Y+ PP+ P PP L R P NCC +L + G + ++ Q EK G Y++ GR+++KH +R YF +S W GWM+GP G GG++ E+ E C H SG W ++ F L + C +IG + + F HKH H+H H H + + LP Y I+++ + ATFV+ NN Sbjct: 143 LQPGDVVQLEIMQGKVYESIRPEFAYTTFSGWLVAPVDPQFRRRSFDQGPERCCCEVCGGSFDPRDPPYPPPTYQPPQVPPPVARPPYILTTKPPYL--PGYS--PPVFR---PDPIPP-----LARYPD-NCCDALIVGRG-NPLSKSIQYEKFGVYDLQEVSPYDGRAIFKHC--DRNEFVYFFQSPRGWSGWMVGPVVGTERGGLILESNEPCVEHGVSGHWKFFDGQAFQPDPNLSVECFHS------EIGEGRTVNPNDF---DHKHYHLHDHVHGPNGNHAPRSLPAYKIQSNADYTEATFVFPNN 429
BLAST of EMLSAG00000003010 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold29_size597861-snap-gene-1.15 (protein:Tk04644 transcript:maker-scaffold29_size597861-snap-gene-1.15-mRNA-1 annotation:"alpha-amylase 1") HSP 1 Score: 55.4546 bits (132), Expect = 1.107e-8 Identity = 36/135 (26.67%), Postives = 62/135 (45.93%), Query Frame = 0 Query: 93 SSSPPSQSGLLGRS-PSSNCCISLYLSSGSDKRVRNSQAEKLGRYNILYKDSVGRSVYKHSQN-ERVYLYYFSRSNTNWKGWMIGPSPGGVMGGILAENEEFCPTHSGKWYYYTSGKFLQSSELHLSCEEETGDE 225 +++P S + S PS CC ++ LSS + + E +G Y ++ +D+ GR +Y+H +L+Y W+GW I S + G I +N+ CP W + + + + L SC +G E Sbjct: 1455 TTAPSVDSTTVTTSEPSGECCETITLSSSGAAGI--AYPELMGDYVMIDEDANGRGIYEHKTILTDAFLHYTEDPEHRWEGWQITSSVDDIYGFIANDNDGTCPKMESGWDFLENEDWHKDPMLKASCSGGSGGE 1587 The following BLAST results are available for this feature:
BLAST of EMLSAG00000003010 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO) Total hits: 0
BLAST of EMLSAG00000003010 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA) Total hits: 25
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BLAST of EMLSAG00000003010 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self) Total hits: 1
BLAST of EMLSAG00000003010 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt) Total hits: 0
BLAST of EMLSAG00000003010 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods) Total hits: 0
BLAST of EMLSAG00000003010 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017)) Total hits: 0
BLAST of EMLSAG00000003010 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins) Total hits: 2
Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Cross References
External references for this gene
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at LSalAtl2s170:909978..927748+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>EMLSAG00000003010-685776 ID=EMLSAG00000003010-685776|Name=EMLSAG00000003010|organism=Lepeophtheirus salmonis|type=gene|length=17771bp|location=Sequence derived from alignment at LSalAtl2s170:909978..927748+ (Lepeophtheirus salmonis)back to top Add to Basket
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