EMLSAG00000003026, EMLSAG00000003026-685792 (gene) Lepeophtheirus salmonis

Overview
NameEMLSAG00000003026
Unique NameEMLSAG00000003026-685792
Typegene
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Homology
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BLAST of EMLSAG00000003026 vs. L. salmonis peptides
Match: EMLSAP00000003026 (pep:novel supercontig:LSalAtl2s:LSalAtl2s171:59002:61556:-1 gene:EMLSAG00000003026 transcript:EMLSAT00000003026 description:"maker-LSalAtl2s171-augustus-gene-0.4")

HSP 1 Score: 259.61 bits (662), Expect = 4.987e-90
Identity = 127/127 (100.00%), Postives = 127/127 (100.00%), Query Frame = 0 
Query:    1 MKNFFVRGYLVFIAFFIAQALGSDTSMDEKKDICLQKVRRLFGSITELEVELLCQIVININANDTKLYEHKTQKNEIVASANNIKYKDIVYFEDGETERKRSINNFLQKIPKSYLKELLMNGRQYYV 127
            MKNFFVRGYLVFIAFFIAQALGSDTSMDEKKDICLQKVRRLFGSITELEVELLCQIVININANDTKLYEHKTQKNEIVASANNIKYKDIVYFEDGETERKRSINNFLQKIPKSYLKELLMNGRQYYV
Sbjct:    1 MKNFFVRGYLVFIAFFIAQALGSDTSMDEKKDICLQKVRRLFGSITELEVELLCQIVININANDTKLYEHKTQKNEIVASANNIKYKDIVYFEDGETERKRSINNFLQKIPKSYLKELLMNGRQYYV 127
The following BLAST results are available for this feature:
BLAST of EMLSAG00000003026 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000003026 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000003026 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self)
Total hits: 1
Match NameE-valueIdentityDescription
EMLSAP000000030264.987e-90100.00pep:novel supercontig:LSalAtl2s:LSalAtl2s171:59002... [more]
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BLAST of EMLSAG00000003026 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000003026 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000003026 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017))
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of EMLSAG00000003026 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s171supercontigLSalAtl2s171:59002..61556 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Blast vs. GO2014-04-02
TblastN vs C. finmarchicus TSA2014-05-09
Blastp vs. self2014-05-10
Blastp vs. SwissProt2017-02-10
Blastp vs. Selected Arthropods2017-02-20
Blastp vs. NR (2/2017)2017-02-20
Blastp vs. Tigriopus kingsejongensis proteins2018-04-18
Properties
Property NameValue
Logic nameensemblgenomes
Descriptionmaker-LSalAtl2s171-augustus-gene-0.4
Biotypeprotein_coding
EvidenceIEA
NoteHypothetical protein
Cross References
External references for this gene
DatabaseAccession
Ensembl Metazoa (gene)EMLSAG00000003026 (primary cross-reference)
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
EMLSAT00000003026EMLSAT00000003026-698873Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at LSalAtl2s171:59002..61556-

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAG00000003026-685792 ID=EMLSAG00000003026-685792|Name=EMLSAG00000003026|organism=Lepeophtheirus salmonis|type=gene|length=2555bp|location=Sequence derived from alignment at LSalAtl2s171:59002..61556- (Lepeophtheirus salmonis)
ATGAAGAACTTTTTTGTGAGAGGATACCTTGTATTTATTGCTTTCTTCAT
TGCTCAAGCATTGGGTTCAGATACATCAATGGACGAAGTAAATATTATTA
TAAATATTTGAAAAAAGACAAAAAAAAACGTGCTAACAATATCATAATTT
TAAATATCACGTAACTTTTAAAAGATTCAATTCAATTTAAACTTATTTAT
TTGCTTTAATTTCTAGAAAAAGGACATATGTCTTCAAAAAGTTAGAAGAC
TTTTTGGATCCATAACGGAACTGGAAGTTGAGCTACTTTGTCAAATTGTG
ATAAATATCAATGCTAATGACACAAAGCTATACGAGCATAAAACACAGAA
AAATGAAATTGTTGCTTCCGCCAATAATATCAAGTATAAGTATGTTATTT
ATAGTCTTTAAAAAAACCTCTTAACACTGCCCTTATTTTTTATTGAAAAC
TTTTTTTTACACAATATCTTCATAAATAAATGTTTTGCTTCTTATTTATA
TATTTGTAAGTTGAATTATAATCAAATGATTAATAATATTCAAAGCACTA
TTTAAGTCAGAATATTGATAACTTATGGCAACACATTTTATGTAAGATAC
TATAACAAAGCAATATGAAGATTTGCTTAGAGCTATGTTGTCATAGTTAA
TTAAAGTTCTCAAGAAAAAAGATTGGATTTTTTAGAAGAATTTTGATCAT
GCGTAATAATTTAAATGTACTTAAGTCAAGTACAAGTATTATCAGGGGAG
TACCTATATGTAATCCTAGAAGTATAATATTTAATAATTAAAAACAAAGA
AATTCAGAGTGTTACAATGAATTTCTCAGACCAATTTTATTATAAAAATT
TTAAAACGCCCATTACTCTTAATGAAAGAATGGAGTTTCTAAGCCAAATT
ATGTAAAATAAATATTTGAGTTACGACAATTGGTCTCTCACCACACAATT
TTATAATTGATGGAAATATCTAGTGTTTTTTAAACATTTTTAAACAAAAT
AAGTGTAATATTTTTAATCATTTTATGTCGAAAGAAATTAAGTATCCATA
AGTACTACTTTTTAAAACAAGTATCGAGTGGTCCATTCAAGTCTGAGCAC
TTTGAATTTCAAAGTTCAACAAGATATAATTTATTAATTAATGATATAAT
TTCAACAAAACTAATATTATAAATAGATTTGTTTCTGAGCTCTCGTAAGG
ATTAATGTAGCCGTCCTTAGCGGTAATGATGGCTTCCAGGCGGCGGKGAA
AGGCTATGCACCCACTGCAGATAAAGTCCTCTGTCATGGCTTGTTAGTGC
TGGCTGACTGTGGCTTTGAGGGCCTCGGTATTTGGAAGATAGACACTGCA
GGCCTTCCCCTTGACATGCACACAAAGATATAGACGAGAGGGTTGGCATC
AAGGCTGTAGGAGGGCCAAAAGTGGCAAAAAAGAGTTCAAAATCATATTG
CCTAATTGATACTAACAAACTATCTATTGTTGAAACCAAAAAGTAATCCT
GTTAAAATTAATTTAAAAAAATATAAGTTAGAATATTTTTTTCTCGGTTA
TCTTAAACTCCCCGTGTTTTCATAATTTTAATTAATATTGTTGCAAAATT
GATGAGGTAGCTTAGGAAGTATTACAAATTTGCATATTGTCTTTTTGAGT
CAATATCGACTATGTATCATGTAAAATTATATTTTTTTAAATTTTGGGGA
TAAAGTTTTACTTTAGCTGATTAATTAAAATAAAATAGAATGTTCACTAC
GTATGTACAGATAAGCAATTGATTAACAATTATATAATTGGTCAATTAAG
TATTTATTTTCAATATACTGAATACATTTAAAAAAGCCCAGTAAATGACT
GTAATACTTATGTACTCAATAATAATCCCAACAATTCAAACAATAAACGT
ATTTTTATCAAGAATTAGAATAAAAGCATTGCCTACAGCCACATAGTTAC
TACATTAGAAAAGCTACAATTATAATTCAATGAAGATGTATTATAGTTAT
TCAAAAAAAAAATCTTGTGTTTGCCTAGAGTATTAGATACAAGGTTCAAT
ATAAAATTTCAGAAATAAATATAACAAGAAAATTGATTTTATATTACTTA
ACTTACATGAAAATTAACCCTAAAAATACCACTGGATCCGTTTAACCCAA
TTTTTTTAAATTGATTATATGTCTTAAAAATGATGATTATGCCTTGCTAA
GGAAGATTCTTTTTAATAAAGCCCATGATTATTATGTATTTTTAAAAATA
TAAATAAATTTGGTTTCATTGTAACCAGTCCTGTCTGAGTTATAGCTACG
TGAAGTAAATTGTCTAGTTTTAAGGATGAATGGAAATTATTGACACATGT
TTCTTTTTATTATTGTAAAACTTAAAGTTAACCCATCAGTTACCAAATAT
TCACAAACAGAGTTTTCATTTTTAATTGCAGAGATATTGTTTATTTTGAA
GATGGAGAAACCGAAAGGAAGAGATCAATAAATAATTTCCTTCAAAAGAT
ACCAAAATCATATCTGAAAGAACTACTCATGAATGGAAGGCAATATTATG
TTTAA
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