EMLSAG00000003351, EMLSAG00000003351-686117 (gene) Lepeophtheirus salmonis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of EMLSAG00000003351 vs. L. salmonis peptides
Match: EMLSAP00000003351 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1832:9469:10873:-1 gene:EMLSAG00000003351 transcript:EMLSAT00000003351 description:"maker-LSalAtl2s1832-snap-gene-0.21") HSP 1 Score: 169.474 bits (428), Expect = 1.037e-55 Identity = 90/90 (100.00%), Postives = 90/90 (100.00%), Query Frame = 0 Query: 1 MKYLALCTLFLCSAISIDAGVFSRRIGRNSPPISSYGAGQVGSASSFNQVTSSFGGSGSSFGGSSFGGSAGGASSGPAVPVVAIIKSRNI 90 MKYLALCTLFLCSAISIDAGVFSRRIGRNSPPISSYGAGQVGSASSFNQVTSSFGGSGSSFGGSSFGGSAGGASSGPAVPVVAIIKSRNI Sbjct: 1 MKYLALCTLFLCSAISIDAGVFSRRIGRNSPPISSYGAGQVGSASSFNQVTSSFGGSGSSFGGSSFGGSAGGASSGPAVPVVAIIKSRNI 90
BLAST of EMLSAG00000003351 vs. L. salmonis peptides
Match: EMLSAP00000003261 (pep:novel supercontig:LSalAtl2s:LSalAtl2s17955:162:681:1 gene:EMLSAG00000003261 transcript:EMLSAT00000003261 description:"augustus_masked-LSalAtl2s17955-processed-gene-0.0") HSP 1 Score: 111.309 bits (277), Expect = 3.283e-32 Identity = 83/89 (93.26%), Postives = 83/89 (93.26%), Query Frame = 0 Query: 1 MKYLALCTLFLCSAISIDAGVFSRRIGRNSPPISSYGAGQVGSASSFNQVTSSFGGSGSSFGGSSFGGSAGGASSGPAVPVVAIIKSRN 89 MKYLALCTL LCSAISIDAGVFSRR GRNSPPISSYGAGQVGSASSFNQVTSSFGGSGSSFGGSSFGGS GGASSGPAVPVVAII N Sbjct: 1 MKYLALCTLVLCSAISIDAGVFSRRTGRNSPPISSYGAGQVGSASSFNQVTSSFGGSGSSFGGSSFGGSTGGASSGPAVPVVAIISESN 89
BLAST of EMLSAG00000003351 vs. L. salmonis peptides
Match: EMLSAP00000003497 (pep:novel supercontig:LSalAtl2s:LSalAtl2s19101:92:630:1 gene:EMLSAG00000003497 transcript:EMLSAT00000003497 description:"augustus_masked-LSalAtl2s19101-processed-gene-0.0") HSP 1 Score: 98.2117 bits (243), Expect = 3.424e-27 Identity = 77/89 (86.52%), Postives = 78/89 (87.64%), Query Frame = 0 Query: 1 MKYLALCTLFLCSAISIDAGVFSRRIGRNSPPISSYGAGQVGSASSFNQVTSSFGGSGSSFGGSSFGGSAGGASSGPAVPVVAIIKSRN 89 MK + L LCSAISIDAGVFSRR GRNSPPISSYGAGQVGSASSFNQVTSSFGGSGSSFGGSSF GSAGGASSGPAVPVVAII N Sbjct: 1 MKTFVVTALLLCSAISIDAGVFSRRTGRNSPPISSYGAGQVGSASSFNQVTSSFGGSGSSFGGSSFSGSAGGASSGPAVPVVAIISESN 89
BLAST of EMLSAG00000003351 vs. L. salmonis peptides
Match: EMLSAP00000003348 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1832:46013:57603:-1 gene:EMLSAG00000003348 transcript:EMLSAT00000003348 description:"augustus_masked-LSalAtl2s1832-processed-gene-0.0") HSP 1 Score: 87.0409 bits (214), Expect = 2.066e-22 Identity = 70/84 (83.33%), Postives = 74/84 (88.10%), Query Frame = 0 Query: 6 LCTLFLCSAISIDAGVFSRRIGRNSPPISSYGAGQVGSASSFNQVTSSFGGSGSSFGGSSFGGSAGGASSGPAVPVVAIIKSRN 89 + L LC AISIDAGVFSRR GRNSPP+S+YGAGQVGSASSFNQVT+SFGGSGSSFGGSSFGGS GGASSGPA PVVAII N Sbjct: 57 VSXLVLCFAISIDAGVFSRRAGRNSPPLSAYGAGQVGSASSFNQVTTSFGGSGSSFGGSSFGGSXGGASSGPAXPVVAIISESN 140
BLAST of EMLSAG00000003351 vs. L. salmonis peptides
Match: EMLSAP00000005388 (pep:novel supercontig:LSalAtl2s:LSalAtl2s2901:64:7290:-1 gene:EMLSAG00000005388 transcript:EMLSAT00000005388 description:"maker-LSalAtl2s2901-snap-gene-0.4") HSP 1 Score: 78.1814 bits (191), Expect = 8.179e-19 Identity = 48/101 (47.52%), Postives = 59/101 (58.42%), Query Frame = 0 Query: 2 KYLALCTLFLCSAISIDAGVFSRRIGRNSPPISSYGAGQVGSASSFNQVTSSFGGSGS-------------SFGGSSFGGSAGGASSGPAVPVVAIIKSRN 89 + +C L LC I+IDAG F RR GR SPP+SSYG GQVG ASS +V++S GGS S GGS+ + G +SGPA PVVAI+ N Sbjct: 125 QQAVVCALVLCPTITIDAGSFFRRTGRTSPPLSSYGVGQVGGASSGGEVSTSIGGSAESSFGGSAAGGAGLSNGGST---AVGEPASGPATPVVAILSETN 222 HSP 2 Score: 68.9366 bits (167), Expect = 2.771e-15 Identity = 31/40 (77.50%), Postives = 34/40 (85.00%), Query Frame = 0 Query: 1 MKYLALCTLFLCSAISIDAGVFSRRIGRNSPPISSYGAGQ 40 MK L +C L LCSAISIDAG+F RR GRNSPP+SSYGAGQ Sbjct: 1 MKSLPVCLLVLCSAISIDAGLFFRRTGRNSPPLSSYGAGQ 40
BLAST of EMLSAG00000003351 vs. L. salmonis peptides
Match: EMLSAP00000007127 (pep:novel supercontig:LSalAtl2s:LSalAtl2s4029:109829:110766:-1 gene:EMLSAG00000007127 transcript:EMLSAT00000007127 description:"augustus_masked-LSalAtl2s4029-processed-gene-0.0") HSP 1 Score: 68.9366 bits (167), Expect = 1.239e-15 Identity = 32/46 (69.57%), Postives = 37/46 (80.43%), Query Frame = 0 Query: 1 MKYLALCTLFLCSAISIDAGVFSRRIGRNSPPISSYGAGQVGSASS 46 MK L +C L LCS I+IDAG F RR GR+SPP+SSYG GQVG+ASS Sbjct: 1 MKSLVVCALVLCSTITIDAGSFFRRTGRSSPPLSSYGVGQVGAASS 46
BLAST of EMLSAG00000003351 vs. L. salmonis peptides
Match: EMLSAP00000003350 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1832:60402:66509:1 gene:EMLSAG00000003350 transcript:EMLSAT00000003350 description:"maker-LSalAtl2s1832-augustus-gene-0.14") HSP 1 Score: 61.6178 bits (148), Expect = 5.089e-13 Identity = 31/54 (57.41%), Postives = 36/54 (66.67%), Query Frame = 0 Query: 1 MKYLALCTLFLCSAISIDAGVFSRRIGRNSPPISSYGAGQVGSASSFNQVTSSF 54 MK A+CT LCS ISI+ G F RR R SPP+SSYG QVG+ASS +SF Sbjct: 1 MKSFAICTFVLCSTISINTGPFLRRTRRXSPPVSSYGGEQVGAASSSGADITSF 54
BLAST of EMLSAG00000003351 vs. L. salmonis peptides
Match: EMLSAP00000008445 (pep:novel supercontig:LSalAtl2s:LSalAtl2s5186:2:480:-1 gene:EMLSAG00000008445 transcript:EMLSAT00000008445 description:"maker-LSalAtl2s5186-augustus-gene-0.2") HSP 1 Score: 52.373 bits (124), Expect = 3.106e-10 Identity = 28/55 (50.91%), Postives = 36/55 (65.45%), Query Frame = 0 Query: 1 MKYLALCTLFLCSAISIDAGVFSRRIGRNSPPISSYGAGQ---VGSASSFNQVTS 52 MK L + + L SA+ IDAG+ RR RNSPP+S Y +G VG AS+ NQVT+ Sbjct: 1 MKSLLISCILLSSALFIDAGLVVRRRARNSPPLSQYSSGNSGVVGXASNRNQVTA 55
BLAST of EMLSAG00000003351 vs. L. salmonis peptides
Match: EMLSAP00000012374 (pep:novel supercontig:LSalAtl2s:LSalAtl2s9060:76:692:1 gene:EMLSAG00000012374 transcript:EMLSAT00000012374 description:"augustus_masked-LSalAtl2s9060-processed-gene-0.0") HSP 1 Score: 45.4394 bits (106), Expect = 1.255e-7 Identity = 23/52 (44.23%), Postives = 35/52 (67.31%), Query Frame = 0 Query: 1 MKYLALCTLFLCSAISIDAGVFSRRIGRNSPPISSYGAGQVGSASSFNQVTS 52 MK LC++ L SA+ IDAG+ R+ R+ P +S+YG+G +G AS+ N V + Sbjct: 1 MKTFILCSVLLSSALLIDAGLV--RVRRDKP-LSNYGSGXIGZASALNPVRT 49
BLAST of EMLSAG00000003351 vs. L. salmonis peptides
Match: EMLSAP00000006949 (pep:novel supercontig:LSalAtl2s:LSalAtl2s3946:41872:43263:-1 gene:EMLSAG00000006949 transcript:EMLSAT00000006949 description:"maker-LSalAtl2s3946-snap-gene-0.0") HSP 1 Score: 43.8986 bits (102), Expect = 3.961e-7 Identity = 20/32 (62.50%), Postives = 26/32 (81.25%), Query Frame = 0 Query: 9 LFLCSAISIDAGVFSRRIGRNSPPISSYGAGQ 40 + L SAIS++ G+FSRR GR +P ISSYG+GQ Sbjct: 1 MMLYSAISVNGGIFSRRTGRYAPLISSYGSGQ 32
BLAST of EMLSAG00000003351 vs. nr
Match: gi|225713490|gb|ACO12591.1| (Cuticle protein CP14.6 precursor [Lepeophtheirus salmonis]) HSP 1 Score: 106.686 bits (265), Expect = 8.841e-27 Identity = 75/89 (84.27%), Postives = 76/89 (85.39%), Query Frame = 0 Query: 1 MKYLALCTLFLCSAISIDAGVFSRRIGRNSPPISSYGAGQVGSASSFNQVTSSFGGSGSSFGGSSFGGSAGGASSGPAVPVVAIIKSRN 89 MK + LCSAISIDAGVFSRR GRNSPPISSYGAGQVGSASSFNQVTSSFGGSGSSFGGSSF GS GGASSGPAVPVVAII N Sbjct: 1 MKTFVVTASLLCSAISIDAGVFSRRTGRNSPPISSYGAGQVGSASSFNQVTSSFGGSGSSFGGSSFAGSTGGASSGPAVPVVAIISESN 89
BLAST of EMLSAG00000003351 vs. nr
Match: gi|155966228|gb|ABU41068.1| (putative cuticle protein [Lepeophtheirus salmonis]) HSP 1 Score: 102.834 bits (255), Expect = 6.014e-25 Identity = 69/89 (77.53%), Postives = 71/89 (79.78%), Query Frame = 0 Query: 1 MKYLALCTLFLCSAISIDAGVFSRRIGRNSPPISSYGAGQVGSASSFNQVTSSFGGSGSSFGGSSFGGSAGGASSGPAVPVVAIIKSRN 89 MKY ALCTL LCSAISIDAGVFSRR GRNSPPISSYGAGQVG+ASSFNQVT+SFGGS GSAGGA SGPA PVVAII N Sbjct: 1 MKYFALCTLVLCSAISIDAGVFSRRAGRNSPPISSYGAGQVGAASSFNQVTTSFGGSSFG-------GSAGGALSGPAAPVVAIISESN 82
BLAST of EMLSAG00000003351 vs. nr
Match: gi|225713610|gb|ACO12651.1| (Cuticle protein CP14.6 precursor [Lepeophtheirus salmonis]) HSP 1 Score: 98.5969 bits (244), Expect = 1.359e-23 Identity = 77/89 (86.52%), Postives = 78/89 (87.64%), Query Frame = 0 Query: 1 MKYLALCTLFLCSAISIDAGVFSRRIGRNSPPISSYGAGQVGSASSFNQVTSSFGGSGSSFGGSSFGGSAGGASSGPAVPVVAIIKSRN 89 MK + L LCSAISIDAGVFSRR GRNSPPISSYGAGQVGSASSFNQVTSSFGGSGSSFGGSSFGGS GGASSGPAVPVVAII N Sbjct: 1 MKTFVVTALLLCSAISIDAGVFSRRTGRNSPPISSYGAGQVGSASSFNQVTSSFGGSGSSFGGSSFGGSTGGASSGPAVPVVAIISESN 89
BLAST of EMLSAG00000003351 vs. nr
Match: gi|155966336|gb|ABU41120.1| (putative cuticle protein, partial [Lepeophtheirus salmonis]) HSP 1 Score: 94.3597 bits (233), Expect = 5.865e-22 Identity = 75/84 (89.29%), Postives = 76/84 (90.48%), Query Frame = 0 Query: 6 LCTLFLCSAISIDAGVFSRRIGRNSPPISSYGAGQVGSASSFNQVTSSFGGSGSSFGGSSFGGSAGGASSGPAVPVVAIIKSRN 89 + L LCSAISIDAGVFSRR GRNSPPISSYGAGQVGSASSFNQVTSSFGGSGSSFGGSSF GSAGGASSGPAVPVVAII N Sbjct: 6 VTALLLCSAISIDAGVFSRRTGRNSPPISSYGAGQVGSASSFNQVTSSFGGSGSSFGGSSFSGSAGGASSGPAVPVVAIISESN 89
BLAST of EMLSAG00000003351 vs. nr
Match: gi|225714550|gb|ACO13121.1| (Cuticle protein CP14.6 precursor [Lepeophtheirus salmonis]) HSP 1 Score: 91.2781 bits (225), Expect = 9.186e-21 Identity = 70/89 (78.65%), Postives = 75/89 (84.27%), Query Frame = 0 Query: 1 MKYLALCTLFLCSAISIDAGVFSRRIGRNSPPISSYGAGQVGSASSFNQVTSSFGGSGSSFGGSSFGGSAGGASSGPAVPVVAIIKSRN 89 MK + L LC AISIDAGVFSRR GRNSPP+S+YGAGQVG+ASSFNQVT+SFGGSGSSFGGSSFGGS GGA SGPA PVVAII N Sbjct: 1 MKSFVVSALVLCFAISIDAGVFSRRAGRNSPPLSAYGAGQVGAASSFNQVTTSFGGSGSSFGGSSFGGSTGGALSGPAAPVVAIISESN 89
BLAST of EMLSAG00000003351 vs. nr
Match: gi|225713142|gb|ACO12417.1| (Cuticle protein CP14.6 precursor [Lepeophtheirus salmonis]) HSP 1 Score: 88.9669 bits (219), Expect = 6.924e-20 Identity = 72/89 (80.90%), Postives = 76/89 (85.39%), Query Frame = 0 Query: 1 MKYLALCTLFLCSAISIDAGVFSRRIGRNSPPISSYGAGQVGSASSFNQVTSSFGGSGSSFGGSSFGGSAGGASSGPAVPVVAIIKSRN 89 MK + L LC AISIDAGVFSRR GRNSPP+S+YGAGQVG+ASSFNQVTSSFGGSGSSFGGSSFGGS GGASSGPA PVVAII N Sbjct: 1 MKSFVVSALVLCFAISIDAGVFSRRAGRNSPPLSAYGAGQVGAASSFNQVTSSFGGSGSSFGGSSFGGSTGGASSGPAAPVVAIISESN 89
BLAST of EMLSAG00000003351 vs. nr
Match: gi|290462295|gb|ADD24195.1| (Larval cuticle protein 8 [Lepeophtheirus salmonis]) HSP 1 Score: 82.4185 bits (202), Expect = 1.828e-17 Identity = 57/89 (64.04%), Postives = 64/89 (71.91%), Query Frame = 0 Query: 1 MKYLALCTLFLCSAISIDAGVFSRRIGRNSPPISSYGAGQVGSASSFNQVTSSFGGSGSSFGGSSFGGSAGGASSGPAVPVVAIIKSRN 89 MK + L LCSAISIDAGVF RR GR S P+SSYGAGQ G+ASS QV+SSF GS SSF GS+ +AGG SGPA PVVAI+ N Sbjct: 1 MKSFVVSALVLCSAISIDAGVFFRRTGRTSEPLSSYGAGQFGAASSVEQVSSSFSGSDSSFSGSA--ATAGGVESGPAAPVVAILSETN 87
BLAST of EMLSAG00000003351 vs. nr
Match: gi|290563078|gb|ADD38933.1| (Cuticle protein 3 [Lepeophtheirus salmonis]) HSP 1 Score: 65.0846 bits (157), Expect = 7.933e-11 Identity = 32/45 (71.11%), Postives = 35/45 (77.78%), Query Frame = 0 Query: 6 LCTLFLCSAISIDAGVFSRRIGRNSPPISSYGAGQVGSASSFNQV 50 + L LCSAISIDAGVF RR GR S P+SSYGAGQ G+ASS QV Sbjct: 5 VVALVLCSAISIDAGVFFRRTGRTSEPLSSYGAGQFGAASSVEQV 49
BLAST of EMLSAG00000003351 vs. nr
Match: gi|225713618|gb|ACO12655.1| (Cuticle protein CP14.6 precursor [Lepeophtheirus salmonis]) HSP 1 Score: 57.7658 bits (138), Expect = 5.090e-8 Identity = 48/98 (48.98%), Postives = 59/98 (60.20%), Query Frame = 0 Query: 1 MKYLALCTLFLCSAISIDAGVFSRRIGRNS-PPISSYGAGQV----GSASSFNQVTSSFGGSGSSFGGSSFGG--------SAGGASSGPAVPVVAII 85 MK L TL L SA+ IDA V RR+ R+ P+SSYGAG + S+ S N V + F G+GSS GGS+ G + GGA+SGPA PVVAII Sbjct: 1 MKSFVLYTLLLSSALVIDASVLHRRLRRDHGAPLSSYGAGPLPLGQASSHSHNHVAAPFNGAGSSSGGSAGGAGSSFSGSPATGGAASGPAAPVVAII 98 The following BLAST results are available for this feature:
BLAST of EMLSAG00000003351 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO) Total hits: 0
BLAST of EMLSAG00000003351 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA) Total hits: 0
BLAST of EMLSAG00000003351 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self) Total hits: 10
BLAST of EMLSAG00000003351 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt) Total hits: 0
BLAST of EMLSAG00000003351 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods) Total hits: 0
BLAST of EMLSAG00000003351 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017)) Total hits: 9
BLAST of EMLSAG00000003351 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins) Total hits: 0
Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Cross References
External references for this gene
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at LSalAtl2s1832:9469..10873- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>EMLSAG00000003351-686117 ID=EMLSAG00000003351-686117|Name=EMLSAG00000003351|organism=Lepeophtheirus salmonis|type=gene|length=1405bp|location=Sequence derived from alignment at LSalAtl2s1832:9469..10873- (Lepeophtheirus salmonis)back to top Add to Basket
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